| Clone Name | baal4o23 |
|---|---|
| Clone Library Name | barley_pub |
>PUR2_THEMA (Q9X0X7) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)| (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 400 Score = 33.1 bits (74), Expect = 0.72 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +2 Query: 428 MVTSKEETINR*NKLVIGEMKEGLGGLAGVDAYTA 532 ++ SKEETI + +KL+IGE+ +G+ G +D + A Sbjct: 147 ILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLA 181
>T2R39_PAPHA (Q646F0) Taste receptor type 2 member 39 (T2R39)| Length = 338 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + EDT ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDTVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRISGLIPWLLWLSVFI 168
>T2R39_PANTR (Q646A9) Taste receptor type 2 member 39 (T2R39)| Length = 338 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + ED ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168
>T2R39_PANPA (Q646C8) Taste receptor type 2 member 39 (T2R39)| Length = 338 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + ED ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168
>T2R39_HUMAN (P59534) Taste receptor type 2 member 39 (T2R39) (T2R57)| Length = 338 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + ED ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168
>T2R39_GORGO (Q645Y7) Taste receptor type 2 member 39 (T2R39)| Length = 338 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + ED ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168
>CP81_BP186 (P41060) Hypothetical exonuclease CP81 (EC 3.1.-.-)| Length = 194 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/93 (25%), Positives = 37/93 (39%) Frame = -1 Query: 353 SEQYCVLASSLKTRHGGQKRFSSFFIDFVLNISITGFSFLNVSYATLFSIQVCMGSCVAN 174 +++ + A + K HG +S F ++ GF N Y T Q + N Sbjct: 71 TDEMVMYAPTWKDIHGA---VASLFFEY-------GFVIYNADYDTRLIYQTAKLYGLEN 120 Query: 173 AGRLYCYLSLNKCPCVGEVLAFISGQPGLFFGY 75 G +CY + C + A G+PG F GY Sbjct: 121 DG--FCYFLNERSACAMMLYAEYRGEPGRFKGY 151
>T2R39_MACMU (Q645S5) Taste receptor type 2 member 39 (T2R39)| Length = 338 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -3 Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157 S + ED ++A K+ F FCS +F FF + NF Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142 Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76 S+ + LRWR GL W WL +I Sbjct: 143 -SYPLFLKLRWRISGLIPWLLWLSVFI 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,794,866 Number of Sequences: 219361 Number of extensions: 1908136 Number of successful extensions: 5333 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5181 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5331 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)