ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal4o23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR2_THEMA (Q9X0X7) Phosphoribosylamine--glycine ligase (EC 6.3.... 33 0.72
2T2R39_PAPHA (Q646F0) Taste receptor type 2 member 39 (T2R39) 32 2.1
3T2R39_PANTR (Q646A9) Taste receptor type 2 member 39 (T2R39) 30 4.6
4T2R39_PANPA (Q646C8) Taste receptor type 2 member 39 (T2R39) 30 4.6
5T2R39_HUMAN (P59534) Taste receptor type 2 member 39 (T2R39) (T2... 30 4.6
6T2R39_GORGO (Q645Y7) Taste receptor type 2 member 39 (T2R39) 30 4.6
7CP81_BP186 (P41060) Hypothetical exonuclease CP81 (EC 3.1.-.-) 30 4.6
8T2R39_MACMU (Q645S5) Taste receptor type 2 member 39 (T2R39) 30 7.9

>PUR2_THEMA (Q9X0X7) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 400

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +2

Query: 428 MVTSKEETINR*NKLVIGEMKEGLGGLAGVDAYTA 532
           ++ SKEETI + +KL+IGE+ +G+ G   +D + A
Sbjct: 147 ILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLA 181



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>T2R39_PAPHA (Q646F0) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + EDT ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDTVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRISGLIPWLLWLSVFI 168



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>T2R39_PANTR (Q646A9) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + ED  ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168



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>T2R39_PANPA (Q646C8) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + ED  ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168



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>T2R39_HUMAN (P59534) Taste receptor type 2 member 39 (T2R39) (T2R57)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + ED  ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168



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>T2R39_GORGO (Q645Y7) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + ED  ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRITGLIPWLLWLSVFI 168



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>CP81_BP186 (P41060) Hypothetical exonuclease CP81 (EC 3.1.-.-)|
          Length = 194

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/93 (25%), Positives = 37/93 (39%)
 Frame = -1

Query: 353 SEQYCVLASSLKTRHGGQKRFSSFFIDFVLNISITGFSFLNVSYATLFSIQVCMGSCVAN 174
           +++  + A + K  HG     +S F ++       GF   N  Y T    Q      + N
Sbjct: 71  TDEMVMYAPTWKDIHGA---VASLFFEY-------GFVIYNADYDTRLIYQTAKLYGLEN 120

Query: 173 AGRLYCYLSLNKCPCVGEVLAFISGQPGLFFGY 75
            G  +CY    +  C   + A   G+PG F GY
Sbjct: 121 DG--FCYFLNERSACAMMLYAEYRGEPGRFKGY 151



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>T2R39_MACMU (Q645S5) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = -3

Query: 333 SIFLEDTSWWAEKVQQFFYRFCSEYFYNRF-FFPECLLCNFILNTSLHGKLRR*CRAFIL 157
           S + ED  ++A K+   F  FCS +F     FF    + NF                   
Sbjct: 102 SFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANF------------------- 142

Query: 156 LSFFK*VSLRWRGVGLHLWPAWLVFWI 76
            S+   + LRWR  GL  W  WL  +I
Sbjct: 143 -SYPLFLKLRWRISGLIPWLLWLSVFI 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,794,866
Number of Sequences: 219361
Number of extensions: 1908136
Number of successful extensions: 5333
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5331
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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