ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4o23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL136453.3| Human DNA sequence from clone RP1-249K20 on chromosome 10, complete sequence Length = 98368 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaat 586 |||||||| ||||||||||||||||||| Sbjct: 49699 gagaggagaggagggaagggaagggaat 49726
>gb|AC121893.3| Mus musculus BAC clone RP24-157C12 from chromosome 16, complete sequence Length = 137384 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 48145 gagaggagaggagggaagggaagggaa 48171 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 560 agaggagcggagggaagggaagggaa 585 ||||||| |||||||||||||||||| Sbjct: 48228 agaggaggggagggaagggaagggaa 48253
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 160515 gagaggaggggagggaagggaagggaa 160489
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 90551 gagaggaggggagggaagggaagggaa 90525
>emb|AL445210.5| Human DNA sequence from clone RP11-545P6 on chromosome 13 Contains a ribosomal protein L29 (RPL19) pseudogene and a CpG island, complete sequence Length = 97710 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 16784 gagaggagaggagggaagggaagggaa 16758
>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3' end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook transcription factor AKNA, complete sequence Length = 125673 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 96922 gagaggagaggagggaagggaagggaa 96948
>emb|AL356055.13| Human DNA sequence from clone RP11-416A14 on chromosome 1 Contains part of the MACF1 gene for microtubule-actin crosslinking factor 1, complete sequence Length = 97288 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 57168 gagaggaggggagggaagggaagggaa 57142
>gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete sequence Length = 150117 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 131731 gagaggaggggagggaagggaagggaa 131757
>gb|AC113145.7| Homo sapiens chromosome 8, clone RP11-109P6, complete sequence Length = 173357 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 152897 gagaggaggggagggaagggaagggaa 152923
>gb|AC063960.10| Homo sapiens chromosome 10 clone RP11-105F10, complete sequence Length = 174677 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaa 585 ||||||||||||||||||||||| Sbjct: 160802 ggagcggagggaagggaagggaa 160824 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaa 585 ||||||||||||||||||||||| Sbjct: 160752 ggagcggagggaagggaagggaa 160774
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 1828170 gagaggaggggagggaagggaagggaa 1828196
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 161915 gagaggaggggagggaagggaagggaa 161941
>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence Length = 166122 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 54180 gagaggaggggagggaagggaagggaa 54206
>gb|AC023762.8| Homo sapiens chromosome 8, clone RP11-401N18, complete sequence Length = 120800 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 13728 gagaggaggggagggaagggaagggaa 13754
>gb|AC078929.27| Homo sapiens 12 BAC RP11-797M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107895 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 80241 gagaggaggggagggaagggaagggaa 80215
>gb|AC104751.9| Mus musculus chromosome 5, clone RP24-167K2, complete sequence Length = 151010 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 98795 gagaggagaggagggaagggaagggaa 98821
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 192784 gagaggaggggagggaagggaagggaa 192758
>gb|AC120547.8| Mus musculus chromosome 8, clone RP23-243L19, complete sequence Length = 170147 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 157765 gagaggaggggagggaagggaagggaa 157739
>emb|CT030260.9| Mouse DNA sequence from clone RP23-462I24 on chromosome 12, complete sequence Length = 164672 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||||| Sbjct: 156409 gagaggaggggagggaagggaagggaa 156383
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 agaggagcggagggaagggaagggaa 585 ||||||| |||||||||||||||||| Sbjct: 64914 agaggaggggagggaagggaagggaa 64889
>gb|AC146413.3| Pan troglodytes BAC clone RP43-34F2 from 7, complete sequence Length = 160890 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 122721 gagaggaggggagggaagggaaggga 122746
>gb|AC122852.2| Mus musculus BAC clone RP23-172A6 from 18, complete sequence Length = 189709 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 ttcaggaaagaaaaacctgtta 253 |||||||||||||||||||||| Sbjct: 131283 ttcaggaaagaaaaacctgtta 131262
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193809 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 ggtgggcgagaggagcggagggaagggaagggaa 585 |||||| ||| |||| |||||||||||||||||| Sbjct: 155836 ggtgggggaggggaggggagggaagggaagggaa 155803
>gb|AC153132.4| Mus musculus BAC clone RP24-362N19 from chromosome 13, complete sequence Length = 178970 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 79515 gagaggaggggagggaagggaaggga 79540
>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete sequence Length = 205208 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 556 ggcgagaggagcggagggaagggaagggaa 585 |||||| |||| |||||||||||||||||| Sbjct: 29672 ggcgaggggaggggagggaagggaagggaa 29701
>gb|AC158115.2| Mus musculus BAC clone RP24-180C10 from chromosome 13, complete sequence Length = 176518 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 5906 gagaggaggggagggaagggaaggga 5881
>gb|AC078833.5| Homo sapiens chromosome 7 clone RP11-266A11, complete sequence Length = 143947 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 101361 gagaggaggggagggaagggaaggga 101386
>gb|AC011233.6| Homo sapiens BAC clone RP11-105F19 from 2, complete sequence Length = 156939 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 560 agaggagcggagggaagggaagggaa 585 ||||||| |||||||||||||||||| Sbjct: 78727 agaggaggggagggaagggaagggaa 78752
>gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p21, complete sequence Length = 177675 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 101829 gagaggaggggagggaagggaaggga 101854
>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence Length = 179757 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 39805 gagaggaggggagggaagggaaggga 39830
>gb|AC140445.3| Mus musculus BAC clone RP23-61D2 from 13, complete sequence Length = 127017 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggga 584 |||||||| ||||||||||||||||| Sbjct: 37780 gagaggaggggagggaagggaaggga 37755
>gb|AC139244.4| Mus musculus BAC clone RP23-324J8 from 16, complete sequence Length = 209201 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 agaggagcggagggaagggaagggaa 585 ||||||| |||||||||||||||||| Sbjct: 138497 agaggaggggagggaagggaagggaa 138472
>emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chromosome 2, complete sequence Length = 196548 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 aatactgttcagaaaacagtca 362 |||||||||||||||||||||| Sbjct: 115682 aatactgttcagaaaacagtca 115703
>gb|AC139324.4| Mus musculus chromosome 18 clone RP24-393N23, complete sequence Length = 180267 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 561 gaggagcggagggaagggaagggaa 585 |||||| |||||||||||||||||| Sbjct: 137149 gaggaggggagggaagggaagggaa 137173
>gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, complete sequence Length = 200195 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 89802 gagaggaggggagggaagggaaggg 89778
>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence Length = 233354 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 86059 gagaggaggggagggaagggaaggg 86083
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gagcggagggaagggaaggga 584 ||||||||||||||||||||| Sbjct: 187840 gagcggagggaagggaaggga 187820
>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part of the GRM1 gene for metabotropic glutamate receptor 1 and a novel pseudogene, complete sequence Length = 53728 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 agcggagggaagggaagggaa 585 ||||||||||||||||||||| Sbjct: 16067 agcggagggaagggaagggaa 16047
>emb|AL365204.11| Human DNA sequence from clone RP11-321L2 on chromosome 9 Contains the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 129191 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gttgcataggagacattcagg 237 ||||||||||||||||||||| Sbjct: 114864 gttgcataggagacattcagg 114884
>emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chromosome 10 Contains three CpG islands, complete sequence Length = 159810 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 561 gaggagcggagggaagggaagggaa 585 |||||| |||||||||||||||||| Sbjct: 87423 gaggaggggagggaagggaagggaa 87447
>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35 Contains the OPRD1 gene for opioid receptor delta 1, two novel genes, the 5' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) and a CpG island, complete sequence Length = 148540 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 agcggagggaagggaagggaa 585 ||||||||||||||||||||| Sbjct: 61011 agcggagggaagggaagggaa 60991
>emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on chromosome 11 Contains a ribosomal protein L7a (Rpl7a) pseudogene and the 3' end of the gene for a novel protein similar to Tensin Tns, complete sequence Length = 223491 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 561 gaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||| Sbjct: 1598 gaggagcgaagggaagggaagggaa 1574
>emb|AL670364.5| Mouse DNA sequence from clone RP23-239H8 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 136025 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 561 gaggagcggagggaagggaagggaa 585 |||||||| |||||||||||||||| Sbjct: 135623 gaggagcgaagggaagggaagggaa 135599
>emb|CR932806.1| Mus musculus chromosome 2, clone ResGen-533P1 strain 129/Sv, complete sequence Length = 114162 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 11790 gagaggagaggagggaagggaaggg 11766
>gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, complete sequence Length = 207682 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 gcgagaggagcggagggaagggaagggaa 585 ||||| |||| |||||||||||||||||| Sbjct: 41815 gcgaggggaggggagggaagggaagggaa 41787
>gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, complete sequence Length = 156539 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 agcggagggaagggaagggaa 585 ||||||||||||||||||||| Sbjct: 61943 agcggagggaagggaagggaa 61963
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 gcgagaggagcggagggaagggaagggaa 585 |||||||||| | |||||||||||||||| Sbjct: 24931931 gcgagaggagggaagggaagggaagggaa 24931903
>gb|AC090827.11| Homo sapiens chromosome 8, clone CTD-2594K21, complete sequence Length = 135010 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 gcgagaggagcggagggaagggaagggaa 585 ||||| |||| |||||||||||||||||| Sbjct: 104020 gcgaggggaggggagggaagggaagggaa 103992
>gb|AC112255.4| Homo sapiens BAC clone RP11-1193F23 from 2, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 96616 gagaggaggggagggaagggaaggg 96592
>gb|AC155725.3| Mus musculus 6 BAC RP24-231N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167534 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 561 gaggagcggagggaagggaagggaa 585 |||||| |||||||||||||||||| Sbjct: 122933 gaggaggggagggaagggaagggaa 122957
>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 227508 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 gagcggagggaagggaaggga 584 ||||||||||||||||||||| Sbjct: 204958 gagcggagggaagggaaggga 204978
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193417 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 561 gaggagcggagggaagggaagggaa 585 |||||| |||||||||||||||||| Sbjct: 34542 gaggaggggagggaagggaagggaa 34566
>gb|AC151289.3| Mus musculus BAC clone RP23-364K1 from chromosome 17, complete sequence Length = 172662 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 13352 gagaggaggggagggaagggaaggg 13328
>emb|AL928806.14| Mouse DNA sequence from clone RP23-34E4 on chromosome 2, complete sequence Length = 179547 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaaggg 583 |||||||| |||||||||||||||| Sbjct: 22924 gagaggagaggagggaagggaaggg 22900
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 gcgagaggagcggagggaagggaagggaa 585 |||||||||| | |||||||||||||||| Sbjct: 33646 gcgagaggagggaagggaagggaagggaa 33618
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 618 ggagaatttacttacaaaaaa 638 ||||||||||||||||||||| Sbjct: 282492 ggagaatttacttacaaaaaa 282472
>dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1987G5 Length = 189987 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 gcgagaggagcggagggaagggaagggaa 585 ||||| |||| |||||||||||||||||| Sbjct: 80948 gcgaggggaggggagggaagggaagggaa 80920
>gb|AC105948.9| Mus musculus chromosome 8, clone RP24-96N12, complete sequence Length = 143798 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagg 582 |||||||| ||||||||||||||| Sbjct: 26036 gagaggaggggagggaagggaagg 26059
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 agaataaagttgcataggagacat 232 ||||||||||||||||| |||||| Sbjct: 214717 agaataaagttgcatagtagacat 214740
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 153715 aggaggggagggaagggaagggaa 153738
>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete sequence Length = 206103 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 agggaagggaagggaatcat 589 |||||||||||||||||||| Sbjct: 27426 agggaagggaagggaatcat 27445
>gb|AC128668.4| Mus musculus BAC clone RP24-81D14 from chromosome 8, complete sequence Length = 211075 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaaaacaagccaggctggc 100 |||||||||||||||||||| Sbjct: 43844 aaaaaacaagccaggctggc 43825
>gb|AC002074.2| Homo sapiens BAC clone GS1-56H18 from 7, complete sequence Length = 116660 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gataattgatcatgcatatc 79 |||||||||||||||||||| Sbjct: 83874 gataattgatcatgcatatc 83893
>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence Length = 235368 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 25436 ggaggggagggaagggaagggaat 25413
>gb|AC142448.3| Mus musculus BAC clone RP24-540M5 from chromosome 18, complete sequence Length = 170302 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 82810 ggaggggagggaagggaagggaat 82833
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aggaaagaaaaacctgttat 254 |||||||||||||||||||| Sbjct: 115137 aggaaagaaaaacctgttat 115156
>ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM06312.1) partial mRNA Length = 3435 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gcgaggatgaagaagatggc 400 |||||||||||||||||||| Sbjct: 1517 gcgaggatgaagaagatggc 1536
>emb|CR384078.17| Zebrafish DNA sequence from clone DKEY-251E16 in linkage group 6, complete sequence Length = 181633 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cctgttatagaaatattcag 266 |||||||||||||||||||| Sbjct: 70160 cctgttatagaaatattcag 70179
>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence Length = 192971 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 35079 aggaggggagggaagggaagggaa 35102
>gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome 7, complete sequence Length = 192288 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 gaggatgaagaagatggcaagctt 406 ||||||||||||||||||| |||| Sbjct: 25254 gaggatgaagaagatggcaggctt 25231
>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence Length = 211932 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 157580 ggaggggagggaagggaagggaat 157603
>gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosome 8, complete sequence Length = 221035 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ttatagaaatattcagaaca 270 |||||||||||||||||||| Sbjct: 114547 ttatagaaatattcagaaca 114566
>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence Length = 193210 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 aatactgttcagaaaacagtcagg 364 |||||||||||||||||| ||||| Sbjct: 181010 aatactgttcagaaaacattcagg 181033
>gb|AC122231.2| Mus musculus BAC clone RP23-135M3 from 5, complete sequence Length = 172949 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 aatactgttcagaaaacagtcagg 364 |||||||||||||||||| ||||| Sbjct: 40308 aatactgttcagaaaacattcagg 40331
>gb|AC127329.3| Mus musculus BAC clone RP23-260A24 from 8, complete sequence Length = 183639 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagg 582 |||||||| ||||||||||||||| Sbjct: 7832 gagaggaggggagggaagggaagg 7809
>gb|AC004859.3| Homo sapiens PAC clone RP4-691F11 from 7, complete sequence Length = 145442 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 24404 ggaggggagggaagggaagggaat 24427
>gb|AC107744.8| Mus musculus chromosome 5, clone RP23-325M7, complete sequence Length = 152515 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 ccaagggataattgatcatgcatatcca 81 |||||||||||| ||||||| ||||||| Sbjct: 125067 ccaagggataatggatcatgaatatcca 125040
>gb|AC007607.6| Homo sapiens chromosome 16 clone RP11-369H7, complete sequence Length = 158941 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaag 581 |||||||||||||||||||| Sbjct: 73934 aggagcggagggaagggaag 73953
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete sequence Length = 161047 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 gagaggagcggagggaagggaagg 582 |||||||| ||||||||||||||| Sbjct: 118999 gagaggagaggagggaagggaagg 118976
>emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chromosome 10 Contains the 3' end of the gene for adenovirus 5 E1A binding protein (BS69), the gene for a novel protein (KIAA0934) and four CpG islands, complete sequence Length = 179755 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 cacagctgaccatggctttg 545 |||||||||||||||||||| Sbjct: 19106 cacagctgaccatggctttg 19125
>emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on chromosome 10 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 65508 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 34311 aggaggggagggaagggaagggaa 34288
>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part of the GPC6 gene for glypican 6 and the 3' end of a novel gene, complete sequence Length = 150021 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 559 gagaggagcggagggaagggaagggaat 586 |||||||| |||||| |||||||||||| Sbjct: 64682 gagaggagaggaggggagggaagggaat 64709
>emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118M15 on chromosome 20 Contains the 3' end of the CTNNBL1 gene for catenin beta like 1, the C20orf102 gene for a novel Immunoglobulin domain-containing protein and a CpG Island, complete sequence Length = 95851 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctggccagagatgaaggcca 115 |||||||||||||||||||| Sbjct: 13088 ctggccagagatgaaggcca 13107
>emb|AL109751.19|HSJ237H22 Human DNA sequence from clone RP1-237H22 on chromosome Xq23-24 Contains the gene for HOM-TES-85 tumor antigen and a CpG island, complete sequence Length = 102751 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 32736 ggaggggagggaagggaagggaat 32759
>gb|AC156268.10| Mus musculus 10 BAC RP24-336P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164611 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 83574 ggaggggagggaagggaagggaat 83597
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 570 agggaagggaagggaatcataagt 593 ||||||||||||||| |||||||| Sbjct: 140508 agggaagggaagggactcataagt 140485
>gb|AC020782.12| Homo sapiens chromosome 8, clone RP11-562L3, complete sequence Length = 104745 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcaaggacacttatttaaag 148 |||||||||||||||||||| Sbjct: 98665 gcaaggacacttatttaaag 98646
>gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, complete sequence Length = 166985 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcaaggacacttatttaaag 148 |||||||||||||||||||| Sbjct: 26342 gcaaggacacttatttaaag 26323
>gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, complete sequence Length = 213865 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 agggaagggaagggaatcat 589 |||||||||||||||||||| Sbjct: 53233 agggaagggaagggaatcat 53252
>gb|AC099514.2| Homo sapiens chromosome 5 clone RP11-454E7, complete sequence Length = 181674 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aaggacacttatttaaagaaagat 154 ||||| |||||||||||||||||| Sbjct: 91141 aaggagacttatttaaagaaagat 91164
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 gaggagcggagggaagggaa 580 |||||||||||||||||||| Sbjct: 46144 gaggagcggagggaagggaa 46125
>gb|AC160337.2| Mus musculus BAC clone RP23-193N1 from chromosome 9, complete sequence Length = 204712 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 agctgaccatggctttgaggattg 552 ||||| |||||||||||||||||| Sbjct: 128504 agctgcccatggctttgaggattg 128481
>dbj|AK034606.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430014E15 product:unclassifiable, full insert sequence Length = 2326 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 caggaaagaaaaacctgtta 253 |||||||||||||||||||| Sbjct: 1528 caggaaagaaaaacctgtta 1547
>gb|AC158667.8| Mus musculus 6 BAC RP23-83P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234055 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 caggaaagaaaaacctgtta 253 |||||||||||||||||||| Sbjct: 130488 caggaaagaaaaacctgtta 130469
>gb|DQ060035.1| Homo sapiens amine oxidase, copper containing 2 (retina-specific) (AOC2) gene, complete cds Length = 8786 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ggagggaagggaagggaatc 587 |||||||||||||||||||| Sbjct: 3630 ggagggaagggaagggaatc 3649
>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence Length = 216451 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 49418 aggaggggagggaagggaagggaa 49441
>gb|AC008592.4|AC008592 Homo sapiens chromosome 5 clone CTC-576H9, complete sequence Length = 192670 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 aggaagatgctagaacacaa 342 |||||||||||||||||||| Sbjct: 15902 aggaagatgctagaacacaa 15883
>dbj|AB012943.2| Homo sapiens AOC2 gene for retina-specific amine oxidase, complete cds Length = 6588 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ggagggaagggaagggaatc 587 |||||||||||||||||||| Sbjct: 2558 ggagggaagggaagggaatc 2577
>gb|AC140263.3| Mus musculus BAC clone RP24-299F13 from chromosome 17, complete sequence Length = 158695 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aggaaagaaaaacctgttat 254 |||||||||||||||||||| Sbjct: 24490 aggaaagaaaaacctgttat 24509
>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence Length = 165916 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 aatactgttcagaaaacagt 360 |||||||||||||||||||| Sbjct: 49540 aatactgttcagaaaacagt 49559
>gb|AC084301.12| Homo sapiens 3 BAC RP11-203F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172875 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gagaataaagttgcatagga 227 |||||||||||||||||||| Sbjct: 35696 gagaataaagttgcatagga 35715
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 76214 aggaggggagggaagggaagggaa 76237
>gb|AC083899.6| Homo sapiens BAC clone RP11-223J6 from 2, complete sequence Length = 153666 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 agggaagggaagggaatcat 589 |||||||||||||||||||| Sbjct: 87958 agggaagggaagggaatcat 87939
>gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, complete sequence Length = 187723 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ggagggaagggaagggaatc 587 |||||||||||||||||||| Sbjct: 111879 ggagggaagggaagggaatc 111898
>gb|U97277.1|RCU97277 Riptortus clavatus vitellogenin mRNA, complete cds Length = 5736 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 ttcgacatggtcacaagcaaagaa 445 |||||||||||||||||| ||||| Sbjct: 1817 ttcgacatggtcacaagcgaagaa 1840
>gb|U73024.1|U73024 Homo sapiens cosmid clone U54B12 from Xp22.1-22.2, complete sequence Length = 38476 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 ggagcggagggaagggaagggaat 586 ||||||||||| |||||||||||| Sbjct: 9385 ggagcggaggggagggaagggaat 9362
>gb|U23819.1|SCU23819 Saccharomyces cerevisiae multidomain vesicle coat protein (SEC16) gene, complete cds Length = 7169 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gggaagggaatcataagtta 595 |||||||||||||||||||| Sbjct: 1484 gggaagggaatcataagtta 1503
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete sequence Length = 131385 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 107346 aggaggggagggaagggaagggaa 107369
>emb|AL935301.8| Mouse DNA sequence from clone RP23-132B12 on chromosome 2, complete sequence Length = 182314 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 acaagccaggctggccagagatga 109 ||||||||||||| |||||||||| Sbjct: 77480 acaagccaggctgtccagagatga 77457
>gb|AC125358.4| Mus musculus BAC clone RP23-256E3 from 8, complete sequence Length = 177236 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aaaaaacaagccaggctggc 100 |||||||||||||||||||| Sbjct: 44213 aaaaaacaagccaggctggc 44232
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 28877 ggaggggagggaagggaagggaat 28900
>gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, complete sequence Length = 40411 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 aggagcggagggaagggaagggaa 585 ||||| |||||||||||||||||| Sbjct: 35633 aggaggggagggaagggaagggaa 35656
>emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on chromosome 2, complete sequence Length = 214642 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 ggagcggagggaagggaagggaat 586 |||| ||||||||||||||||||| Sbjct: 195804 ggaggggagggaagggaagggaat 195781
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gggaagggaatcataagtta 595 |||||||||||||||||||| Sbjct: 1267 gggaagggaatcataagtta 1286
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 gaggagcggagggaagggaa 580 |||||||||||||||||||| Sbjct: 66321 gaggagcggagggaagggaa 66340
>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete sequence Length = 218815 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 agaggagcggagggaagggaaggg 583 |||||||| ||||||||||||||| Sbjct: 72694 agaggagctgagggaagggaaggg 72717
>gb|AC055866.19| Homo sapiens chromosome 17, clone RP11-376M2, complete sequence Length = 204746 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ggagggaagggaagggaatc 587 |||||||||||||||||||| Sbjct: 30528 ggagggaagggaagggaatc 30547 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,790,501 Number of Sequences: 3902068 Number of extensions: 6790501 Number of successful extensions: 195789 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 194818 Number of HSP's gapped (non-prelim): 938 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
