No.
Definition
Score (bits)
E Value
1 gb|AY107857.1| Zea mays PCO113823 mRNA sequence
323
4e-85
2 gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome...
107
4e-20
3 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
107
4e-20
4 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
107
4e-20
5 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
105
2e-19
6 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
105
2e-19
7 emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003...
105
2e-19
8 ref|NM_121980.2| Arabidopsis thaliana unknown protein AT5G19750 ...
50
0.008
9 gb|BT001037.1| Arabidopsis thaliana At5g19750/T29J13_170 mRNA, c...
50
0.008
10 gb|AY058149.1| Arabidopsis thaliana AT5g19750/T29J13_170 mRNA, c...
50
0.008
11 gb|AY088454.1| Arabidopsis thaliana clone 6789 mRNA, complete se...
50
0.008
12 gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
44
0.51
13 emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on ch...
44
0.51
14 gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosom...
42
2.0
15 ref|XM_523748.1| PREDICTED: Pan troglodytes similar to v-maf mus...
40
7.9
16 gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosom...
40
7.9
17 ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion excha...
40
7.9
18 ref|XM_593201.2| PREDICTED: Bos taurus similar to v-maf musculoa...
40
7.9
19 ref|XM_426535.1| PREDICTED: Gallus gallus similar to family with...
40
7.9
20 gb|AC134847.3| Mus musculus BAC clone RP24-171M1 from chromosome...
40
7.9
21 ref|NM_022172.1| Homo sapiens pyruvate carboxylase (PC), nuclear...
40
7.9
22 gb|BC012327.1| Homo sapiens v-maf musculoaponeurotic fibrosarcom...
40
7.9
23 ref|NM_000920.2| Homo sapiens pyruvate carboxylase (PC), nuclear...
40
7.9
24 gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete seq...
40
7.9
25 gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete se...
40
7.9
26 ref|NM_002359.2| Homo sapiens v-maf musculoaponeurotic fibrosarc...
40
7.9
27 ref|NM_032711.2| Homo sapiens v-maf musculoaponeurotic fibrosarc...
40
7.9
28 gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com...
40
7.9
29 gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet...
40
7.9
30 gb|BC011617.2| Homo sapiens pyruvate carboxylase, mRNA (cDNA clo...
40
7.9
31 gb|AE014075.1| Escherichia coli CFT073, complete genome
40
7.9
32 gb|BC114135.1| Bos taurus pyruvate carboxylase, mRNA (cDNA clone...
40
7.9
33 emb|Y11514.1|HSMAFTRAN Homo sapiens mRNA for transcription facto...
40
7.9
34 emb|AJ719425.1| Gallus gallus mRNA for hypothetical protein, clo...
40
7.9
35 ref|NM_001006350.1| Gallus gallus Der1-like domain family, membe...
40
7.9
36 emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 i...
40
7.9
37 ref|NM_177946.3| Bos taurus pyruvate carboxylase (PC), mRNA
40
7.9
38 gb|CP000249.1| Frankia sp. CcI3, complete genome
40
7.9
39 gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence
40
7.9
40 gb|S72370.1| pyruvate carboxylase [human, kidney, mRNA, 4017 nt]
40
7.9
41 emb|CR387716.1| Gallus gallus finished cDNA, clone ChEST867d11
40
7.9
42 tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specifi...
40
7.9
43 gb|AY185595.1| Bos taurus pyruvate carboxylase mRNA, 5' UTR and ...
40
7.9
44 emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11
40
7.9
45 emb|CR338924.1| Gallus gallus finished cDNA, clone ChEST981i23
40
7.9
46 gb|AC092275.3| Homo sapiens chromosome 16 clone CTC-786C10, comp...
40
7.9
47 gb|AY892928.1| Synthetic construct Homo sapiens clone FLH139802....
40
7.9
48 gb|AY890467.1| Synthetic construct Homo sapiens clone FLH139806....
40
7.9
49 emb|AL929225.6| Zebrafish DNA sequence from clone CH211-250A24, ...
40
7.9
50 gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c...
40
7.9
51 dbj|AB026490.1| Mus musculus gene for mSlc9a3r2/E3karp/Sip-1/Tka...
40
7.9
52 gb|U84249.1|HSU84249 Homo sapiens basic-leucine zipper transcrip...
40
7.9
53 gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, com...
40
7.9
54 emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chr...
40
7.9
55 gb|AF059195.1|AF059195 Homo sapiens basic-leucine zipper transcr...
40
7.9
56 gb|U04641.1|HSU04641 Human pyruvate carboxylase (PC) mRNA, compl...
40
7.9
57 gb|U30891.1|HSU30891 Human pyruvate carboxylase precursor, mRNA,...
40
7.9
58 dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:C...
40
7.9
>gb|AC123516.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 107 bits (54), Expect = 4e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||||| |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 51550 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 51491
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 51490 tttgggacttgtcctggtggggccaacattgcatgtctggta 51449
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 51165 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 51106
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 51105 ggaaagccttctcttgtagttccaaagctcaagcagg 51069
Score = 87.7 bits (44), Expect = 4e-14
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 50859 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 50800
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 50799 aatttttactttgtcccaca 50780
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 50638 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 50579
Query: 579 ctca 582
||||
Sbjct: 50578 ctca 50575
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 270 ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 329
|||||||||| ||||||||||||||||| |||| || |||| |||| ||| ||||||
Sbjct: 51364 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 51305
Query: 330 tgttacttga 339
| ||||||||
Sbjct: 51304 tcttacttga 51295
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 52311 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 52252
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 52251 taaccctgaccggagacctcatctgccag 52223
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 107 bits (54), Expect = 4e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||||| |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 1432755 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1432696
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 1432695 tttgggacttgtcctggtggggccaacattgcatgtctggta 1432654
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1432370 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1432311
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 1432310 ggaaagccttctcttgtagttccaaagctcaagcagg 1432274
Score = 87.7 bits (44), Expect = 4e-14
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1432064 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1432005
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 1432004 aatttttactttgtcccaca 1431985
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1431843 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1431784
Query: 579 ctca 582
||||
Sbjct: 1431783 ctca 1431780
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 270 ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 329
|||||||||| ||||||||||||||||| |||| || |||| |||| ||| ||||||
Sbjct: 1432569 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1432510
Query: 330 tgttacttga 339
| ||||||||
Sbjct: 1432509 tcttacttga 1432500
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 1433516 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1433457
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 1433456 taaccctgaccggagacctcatctgccag 1433428
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 107 bits (54), Expect = 4e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||||| |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 1430476 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1430417
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 1430416 tttgggacttgtcctggtggggccaacattgcatgtctggta 1430375
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1430091 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1430032
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 1430031 ggaaagccttctcttgtagttccaaagctcaagcagg 1429995
Score = 87.7 bits (44), Expect = 4e-14
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1429785 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1429726
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 1429725 aatttttactttgtcccaca 1429706
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1429564 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1429505
Query: 579 ctca 582
||||
Sbjct: 1429504 ctca 1429501
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 270 ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 329
|||||||||| ||||||||||||||||| |||| || |||| |||| ||| ||||||
Sbjct: 1430290 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1430231
Query: 330 tgttacttga 339
| ||||||||
Sbjct: 1430230 tcttacttga 1430221
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 1431237 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1431178
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 1431177 taaccctgaccggagacctcatctgccag 1431149
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766
Score = 91.7 bits (46), Expect = 2e-15
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||| | |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 1337251 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1337192
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 1337191 tttgggactcgtcctggtggggccaacattgcatgtctggta 1337150
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1336448 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1336389
Query: 579 ctca 582
||||
Sbjct: 1336388 ctca 1336385
Score = 79.8 bits (40), Expect = 9e-12
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 1338005 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1337946
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 1337945 taaccctgaccggagacctcatctgccag 1337917
Score = 46.1 bits (23), Expect = 0.13
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 270 ggtacttgtatttgagtaaattagtga 296
|||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766
Score = 91.7 bits (46), Expect = 2e-15
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||| | |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 1337251 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1337192
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 1337191 tttgggactcgtcctggtggggccaacattgcatgtctggta 1337150
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1336448 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1336389
Query: 579 ctca 582
||||
Sbjct: 1336388 ctca 1336385
Score = 79.8 bits (40), Expect = 9e-12
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 1338005 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1337946
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 1337945 taaccctgaccggagacctcatctgccag 1337917
Score = 46.1 bits (23), Expect = 0.13
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 270 ggtacttgtatttgagtaaattagtga 296
|||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
>emb|BX000507.2 |CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 105 bits (53), Expect = 2e-19
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 341 cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 400
|||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 92307 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 92366
Query: 401 ggaaagccatcacttgtagtgccaaagcttaagcagg 437
|||||||| || |||||||| |||||||| |||||||
Sbjct: 92367 ggaaagccttctcttgtagttccaaagctcaagcagg 92403
Score = 91.7 bits (46), Expect = 2e-15
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 172 ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 231
|||||| | |||||||||||||||| ||||||| |||||||||| ||||| ||||| |
Sbjct: 91918 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 91977
Query: 232 attggggcttgtcctggtggggccaacgttgcatttctggta 273
||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 91978 tttgggactcgtcctggtggggccaacattgcatgtctggta 92019
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 519 tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 578
||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 92721 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 92780
Query: 579 ctca 582
||||
Sbjct: 92781 ctca 92784
Score = 79.8 bits (40), Expect = 9e-12
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 434 caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 493
||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 92496 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 92555
Query: 494 aatttctattttgtcccaca 513
||||| || |||||||||||
Sbjct: 92556 aatttttactttgtcccaca 92575
Score = 50.1 bits (25), Expect = 0.008
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 87 ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 146
||||||| ||| ||||||| |||||||| | | || |||||||| || ||||| || |
Sbjct: 91164 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 91223
Query: 147 tgaccctggccggggacctcatctgccag 175
| |||||| |||| |||||||||||||||
Sbjct: 91224 taaccctgaccggagacctcatctgccag 91252
Score = 46.1 bits (23), Expect = 0.13
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 270 ggtacttgtatttgagtaaattagtga 296
|||||||||| ||||||||||||||||
Sbjct: 92111 ggtacttgtacttgagtaaattagtga 92137
>dbj|AP000485.5 | Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete
sequence
Length = 139072
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 cccccgcagcagcatctgga 43
||||||||||||||||||||
Sbjct: 125563 cccccgcagcagcatctgga 125582
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,414,516
Number of Sequences: 3902068
Number of extensions: 5414516
Number of successful extensions: 111257
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110944
Number of HSP's gapped (non-prelim): 313
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)