>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +1

Query: 4   SARGYPPVSVSGTGTLLLKVVRAFPGSMASVTYFSAVAPGMSLVEKQLL--VHGAHTSAL 177
           S +G      S  GT    + RAF G+  + T   A APG  L+ K +L  +H   +  L
Sbjct: 202 SLKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPG--LITKWVLFNLHPLLSIGL 259

Query: 178 QRLVLGPRLEAFSLPLLTLK 237
            R++  P +  FSLP   +K
Sbjct: 260 PRVIEEPLIHTFSLPPALVK 279

>DMBT1_PIG (Q4A3R3) Deleted in malignant brain tumors 1 protein precursor|
          Length = 1204

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 96  YILQRRSAWYEPRGEAIASPRGSYFSAAALGTRTSARGIFSTPSYP 233
           Y       W+ P     ASP     S+   G  TSA G FS+PSYP
Sbjct: 494 YTTTPSQTWWHPTTTTAASP-----SSPCGGFLTSASGTFSSPSYP 534

>YPAH_PSELE (P52089) UPF0178 protein in pahZ1 5'region|
          Length = 154

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 416 VVVRGEMPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASG 544
           V+ +G +PL PR  W++   + AQQLT    ++   G+G  +G
Sbjct: 82  VLEKGGLPLNPRGEWYTKDTI-AQQLTMRAFMEELRGSGVDTG 123

>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein|
          Length = 977

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = -2

Query: 226 EGVEKMPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*SM*PMPYSQEKLERPSTKG 47
           EG++  PRA+   P AA L   P    +ASPR         +  P P    +  RP T G
Sbjct: 417 EGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPT--PAPSIFNRSARPFTPG 474

Query: 46  YLYPKPT 26
               +PT
Sbjct: 475 LQGQRPT 481

>POF13_SCHPO (O94334) F-box protein pof13|
          Length = 396

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 573 LVFRVCLDLVPLAQPAPKQCFTPRCPVNCC 484
           ++F+  LD +P     P +C   RCP+N C
Sbjct: 233 ILFQNALDALPTTHGNPVECDISRCPLNAC 262

>ITA5_HUMAN (P08648) Integrin alpha-5 precursor (Fibronectin receptor alpha|
           subunit) (Integrin alpha-F) (VLA-5) (CD49e antigen)
           [Contains: Integrin alpha-5 heavy chain; Integrin
           alpha-5 light chain]
          Length = 1049

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +3

Query: 63  RSSFSWEYGIGYILQRRSAWYEPRGEAIASPRGSYFSAAALGTRTSARGIFSTPSYPE 236
           RS FSW  G GY     SA +   G  +    GSYF    + + T  +   +   YPE
Sbjct: 193 RSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQ--IAESYYPE 248

>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor|
          Length = 667

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 111 GAEVCNRCHTPRKSSNDLQQKGTCTRNRHRWVASCR 4
           GA  C+ C T     N+  Q G CT    R VA+C+
Sbjct: 430 GASYCSECDT----QNEYPQNGICTSTTARTVATCK 461

>MURE_SYNPX (Q7U5L3) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 500

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 450 LGSSGISPLTTTHPLILQHQSVRTSAPRAEFGT---RWTTGQYSCTTPCWYGGTEEARLA 280
           +G +G +  TTT  LI +H +VR   P A FGT   RW     + T         +A+LA
Sbjct: 113 IGVTGTNGKTTTTHLI-EHLAVRVGQPTALFGTLVNRWPGYSITATHTTSVADRLQAQLA 171

Query: 279 E 277
           E
Sbjct: 172 E 172

>CN12L_DROME (Q9VTL1) CSN12-like protein|
          Length = 395

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = -3

Query: 573 LVFRVCLDLVPLAQPAPKQC--FTP 505
           L++RVCLDL  LAQ   K C  FTP
Sbjct: 108 LMYRVCLDLRYLAQACEKHCQGFTP 132

>COX1_CHLRE (P08681) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 505

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
 Frame = +1

Query: 16  YPPVSVSGTGTLL-LKVVRAFPGSMAS--------VTYFSAVAPGMSLVEKQLLVHGAHT 168
           YPP+SV  +GT + L ++      ++S        VT     APGM L+   L V     
Sbjct: 128 YPPLSVQHSGTSVDLAILSLHLNGLSSILGAVNMLVTVAGLRAPGMKLLHMPLFVWAIAL 187

Query: 169 SALQRLVLGPRLEAFSLPLLT 231
           +A+  ++  P L A  + LLT
Sbjct: 188 TAVLVILAVPVLAAALVMLLT 208


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,943,816
Number of Sequences: 219361
Number of extensions: 2122053
Number of successful extensions: 5459
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5454
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)