ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal5a21 |
|---|---|
| Clone Library Name | barley_pub |
>STAR7_HUMAN (Q9NQZ5) StAR-related lipid transfer protein 7 (StARD7) (START| domain-containing protein 7) (Protein GTT1) Length = 295 Score = 63.2 bits (152), Expect = 7e-10 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 5/159 (3%) Frame = +1 Query: 97 EGNDGGPAWIKMMEKALPNMTYQAWRRDPQNGPPQYQSSTIFENATPDEVRDFFG---DD 267 EGN+ + E + ++ WRR P G YQ +F T R FF D Sbjct: 54 EGNEDSEGKEQRWEMVMDKKHFKLWRR-PITGTHLYQYR-VFGTYTDVTPRQFFNVQLDT 111 Query: 268 EFRMSNKWDDMLISHQTLEECQTTGTMKVHWVRKFPFFCSDREYIIARR--IWKLGSAYY 441 E+R KWD ++I + +E +G+ +HWV FP+ R+Y+ RR + + + Sbjct: 112 EYR--KKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNMMV 169 Query: 442 CVTKGVPCSSIPRRSKPRRVDSYYSSWCIRAVESRRGNG 558 V++ V S+P + RV SY S IR +S NG Sbjct: 170 LVSRAVEHPSVPESPEFVRVRSYESQMVIRPHKSFDENG 208
>STAR7_MOUSE (Q8R1R3) StAR-related lipid transfer protein 7 (StARD7) (START| domain-containing protein 7) Length = 295 Score = 60.5 bits (145), Expect = 4e-09 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%) Frame = +1 Query: 100 GNDGGPAWIKMMEKALPNMTYQAWRRDPQNGPPQYQSSTIFENATPDEVRDFFG---DDE 270 GN+ + E + ++ WRR P G YQ +F T R FF D E Sbjct: 55 GNEKSKDKEEPWEMVMDKKHFKLWRR-PITGTHLYQYR-VFGTYTDVTPRQFFNVQLDTE 112 Query: 271 FRMSNKWDDMLISHQTLEECQTTGTMKVHWVRKFPFFCSDREYIIARR--IWKLGSAYYC 444 +R KWD ++I + +E +G+ +HWV FP+ R+Y+ RR + + + Sbjct: 113 YR--KKWDALVIKLEVIERDAVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNVMVL 170 Query: 445 VTKGVPCSSIPRRSKPRRVDSYYSSWCIRAVESRRGNG 558 V++ V S+P + RV SY S IR +S NG Sbjct: 171 VSRAVEHPSVPESPEFVRVRSYESQMVIRPHKSFDENG 208
>PPCT_RAT (P53809) Phosphatidylcholine transfer protein (PC-TP) (StAR-related| lipid transfer protein 2) (StARD2) (START domain-containing protein 2) Length = 214 Score = 47.0 bits (110), Expect = 5e-05 Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 6/163 (3%) Frame = +1 Query: 178 DPQNGPPQYQSSTIFENATPDEVRDFFGDDEFRMSNKWDDMLISHQTLEECQTTGTMKVH 357 D G +Y+ + E+ P + D + D ++R KWD + + L E G M + Sbjct: 46 DQSTGLYEYKVFGVLESCIPSLLADVYMDLDYR--KKWDQYV---KELYEKSFDGQMVAY 100 Query: 358 WVRKFPFFCSDREYIIARRIWKLG----SAYYCVTKGVPCSSIPRRSKPRRVDSYYSSWC 525 W K+PF S+R+Y+ R+ L Y + + + P +S RV Y S Sbjct: 101 WEVKYPFPLSNRDYVYTRQRRDLDVDGRKIYVVLAQNISVPQFPEKSGVIRVKQYKQSLA 160 Query: 526 IRAVESRRGNGGSSACEILLFHHEDMG--IPNEIAKIGIRQGM 648 I + G + +++ ++ G IP+ + + G+ Sbjct: 161 IE-------SDGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGV 196
>PPCT_BOVIN (P02720) Phosphatidylcholine transfer protein (PC-TP) (StAR-related| lipid transfer protein 2) (StARD2) (START domain-containing protein 2) Length = 213 Score = 45.1 bits (105), Expect = 2e-04 Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 6/163 (3%) Frame = +1 Query: 178 DPQNGPPQYQSSTIFENATPDEVRDFFGDDEFRMSNKWDDMLISHQTLEECQTTGTMKVH 357 D Q G Y+ + E+ PD + D + D +R +WD + + L E + +G V+ Sbjct: 46 DQQTGLYAYKVFGVLEDCLPDLLADVYMDLAYR--KQWDQYV---KELYEKECSGETVVY 100 Query: 358 WVRKFPFFCSDREYIIARRIWKLG----SAYYCVTKGVPCSSIPRRSKPRRVDSYYSSWC 525 W K+PF S+R+Y+ R+ +L + + + P +S RV Y Sbjct: 101 WQVKYPFPMSNRDYVYVRQRQELDFEGQKVHVILAQSTSEPQFPEKSGVIRVKHYKQRLA 160 Query: 526 IRAVESRRGNGGSSACEILLFHHEDMG--IPNEIAKIGIRQGM 648 I++ + +RG+ ++ +++ ++ G IP+ + + G+ Sbjct: 161 IQS-DGKRGS------KVFMYYFDNPGGQIPSWVINWAAKNGV 196
>PPCT_HUMAN (Q9UKL6) Phosphatidylcholine transfer protein (PC-TP) (StAR-related| lipid transfer protein 2) (StARD2) (START domain-containing protein 2) Length = 214 Score = 44.7 bits (104), Expect = 3e-04 Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 6/163 (3%) Frame = +1 Query: 178 DPQNGPPQYQSSTIFENATPDEVRDFFGDDEFRMSNKWDDMLISHQTLEECQTTGTMKVH 357 D + G +Y+ + E+ +P + D + D ++R +WD + + L E + G V+ Sbjct: 46 DKKTGLYEYKVFGVLEDCSPTLLADIYMDSDYR--KQWDQYV---KELYEQECNGETVVY 100 Query: 358 WVRKFPFFCSDREYIIARRIWKLG----SAYYCVTKGVPCSSIPRRSKPRRVDSYYSSWC 525 W K+PF S+R+Y+ R+ L + + + + RS RV Y S Sbjct: 101 WEVKYPFPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLA 160 Query: 526 IRAVESRRGNGGSSACEILLFHHEDMG--IPNEIAKIGIRQGM 648 I + G ++ +++ ++ G IP+ + + G+ Sbjct: 161 IE-------SDGKKGSKVFMYYFDNPGGQIPSWLINWAAKNGV 196
>PPCT_MOUSE (P53808) Phosphatidylcholine transfer protein (PC-TP) (StAR-related| lipid transfer protein 2) (StARD2) (START domain-containing protein 2) Length = 214 Score = 44.3 bits (103), Expect = 3e-04 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 6/163 (3%) Frame = +1 Query: 178 DPQNGPPQYQSSTIFENATPDEVRDFFGDDEFRMSNKWDDMLISHQTLEECQTTGTMKVH 357 D +G +Y+ + E +P + D + D ++R +WD + + L E ++ M + Sbjct: 46 DQPSGLYEYKVFGVLEGCSPALLTDVYMDLDYR--KQWDQYV---KELYEKESDEQMVAY 100 Query: 358 WVRKFPFFCSDREYIIARRIWKLG----SAYYCVTKGVPCSSIPRRSKPRRVDSYYSSWC 525 W K+PF S+R+Y+ R+ L Y + + + P +S RV Y S Sbjct: 101 WEVKYPFPLSNRDYVYTRQRRDLDVDRRKIYVVLAQSISAPQFPEKSGVIRVKQYKQSLA 160 Query: 526 IRAVESRRGNGGSSACEILLFHHEDMG--IPNEIAKIGIRQGM 648 I + G + +++ ++ G IP+ + + G+ Sbjct: 161 IE-------SDGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGV 196
>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1895 Score = 33.5 bits (75), Expect = 0.58 Identities = 21/57 (36%), Positives = 27/57 (47%) Frame = +1 Query: 133 MEKALPNMTYQAWRRDPQNGPPQYQSSTIFENATPDEVRDFFGDDEFRMSNKWDDML 303 +E ALPN Y AW DPQ+ P Q IF + T + FG M N +D + Sbjct: 158 IEMALPNDPYPAWTADPQSPLPIEQIEDIFIDLT-----NKFGFQRDSMRNMFDHFM 209
>Y1342_ARATH (Q9C810) PHD finger protein At1g33420| Length = 697 Score = 32.7 bits (73), Expect = 1.00 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 514 SNTNLLCEVCCAVGWMNMAHPL*HNSTRFPVSISGE-Q*CTPC 389 S+ ++ CE CC VGW +HP+ RF + G+ + CT C Sbjct: 104 SSRSVYCEHCCVVGW--SSHPVCRKRYRFIIRSGGDTKACTRC 144
>SDCG1_MOUSE (Q8CCP0) Serologically defined colon cancer antigen 1| Length = 1064 Score = 30.0 bits (66), Expect = 6.5 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Frame = +1 Query: 313 QTLEECQTTGTM----KVHWVRKFPFFCSDREYII 405 QTL+E QT ++ KV+W KF +F S Y+I Sbjct: 505 QTLKEVQTVTSIQKARKVYWFEKFLWFISSENYLI 539
>SDCG1_HUMAN (O60524) Serologically defined colon cancer antigen 1 (Antigen| NY-CO-1) Length = 1076 Score = 30.0 bits (66), Expect = 6.5 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Frame = +1 Query: 313 QTLEECQTTGTM----KVHWVRKFPFFCSDREYII 405 QTL+E QT ++ KV+W KF +F S Y+I Sbjct: 507 QTLKEVQTVTSIQKARKVYWFEKFLWFISSENYLI 541
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 30.0 bits (66), Expect = 6.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 539 SQDEGTVDRLPARSSCSTMRIWASQMRLRRL 631 S E T RLP SS TM W SQ R ++L Sbjct: 136 SHGESTRGRLPRISSVETMEAWVSQQRGKKL 166
>TSSK6_HUMAN (Q9BXA6) Testis-specific serine/threonine-protein kinase 6 (EC| 2.7.11.1) (TSSK-6) (Small serine/threonine kinase) (Serine/threonine-protein kinase SSTK) Length = 273 Score = 29.6 bits (65), Expect = 8.4 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = -1 Query: 277 SGTHRPQKSPLLHP-GLRSQRLCCSGIAEAHSGDPSSRP-----GRSCW 149 +G R QK +L+P GL C + IAE PS+RP R+CW Sbjct: 218 AGLPRRQKRGVLYPEGLELSERCKALIAELLQFSPSARPSAGQVARNCW 266
>FIZ1_HUMAN (Q96SL8) Flt3-interacting zinc finger protein 1| Length = 496 Score = 29.6 bits (65), Expect = 8.4 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = -1 Query: 652 PTCPAECQ---SSQSHLGCPYPHGGTRGSRRQTIHRSLVLTPLHGCTSLSNTNLLCEVCC 482 P C C+ SS+S LG R RRQ HR ++ +PL L + C VCC Sbjct: 106 PYCCLVCELRFSSRSSLG--------RHLRRQ--HRGVLPSPLQPGPGLPALSAPCSVCC 155 Query: 481 AVG 473 VG Sbjct: 156 NVG 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,034,819 Number of Sequences: 219361 Number of extensions: 2397079 Number of successful extensions: 6946 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6944 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
