Clone Information

BLAST Search Result

Clone Name	baal5a18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	139	2e-33
2	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	135	2e-32
3	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	135	3e-32
4	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	134	4e-32
5	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	134	4e-32
6	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	133	1e-31
7	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	133	1e-31
8	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	132	2e-31
9	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	132	2e-31
10	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	132	2e-31
11	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	131	4e-31
12	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	131	4e-31
13	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	131	5e-31
14	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	130	6e-31
15	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	130	1e-30
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	114	5e-26
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	93	1e-19
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	93	2e-19
19	KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	0.68
20	KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	0.68
21	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	31	0.89
22	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	31	0.89
23	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	31	0.89
24	VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG)...	30	1.5
25	COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	1.5
26	KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ...	30	2.0
27	KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr...	30	2.0
28	UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	2.6
29	UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	2.6
30	KAD_CYPCA (P12115) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp...	28	4.4
31	KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	28	4.4
32	URK_CLOPE (Q8XJI6) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	28	4.4
33	KAD1_PIG (P00571) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP...	28	4.4
34	KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	28	4.4
35	KAD1_CHICK (P05081) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	28	4.4
36	KAD1_BOVIN (P00570) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	28	4.4
37	KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	28	5.8
38	KAD_PRUAR (O24464) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp...	28	5.8
39	KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	28	5.8
40	KAD1_RAT (P39069) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP...	28	7.5
41	KAD1_MOUSE (Q9R0Y5) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	28	7.5
42	COPD_RAT (Q66H80) Coatomer subunit delta (Delta-coat protein) (D...	28	7.5
43	COPD_PONPY (Q5RA77) Coatomer subunit delta (Delta-coat protein) ...	28	7.5
44	COPD_MOUSE (Q5XJY5) Coatomer subunit delta (Delta-coat protein) ...	28	7.5
45	COPD_HUMAN (P48444) Coatomer subunit delta (Delta-coat protein) ...	28	7.5
46	COPD_BOVIN (P53619) Coatomer subunit delta (Delta-coat protein) ...	28	7.5
47	COA2_SV40 (P03093) Coat protein VP2 [Contains: Coat protein VP3]	28	7.5
48	KAD_TRYBR (O61069) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp...	28	7.5
49	UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine ...	28	7.5
50	COAE_PSESM (Q888U3) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	27	9.8
51	EFTS_RAT (Q9QYU2) Elongation factor Ts, mitochondrial precursor ...	27	9.8
52	ISPG_RHOPA (Q6NCF3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	27	9.8
53	UCK_CAEEL (Q17413) Probable uridine-cytidine kinase (EC 2.7.1.48...	27	9.8
54	TOR3A_MOUSE (Q9ER38) Torsin-3A precursor (Torsin family 3 member...	27	9.8
55	PLDP1_ARATH (Q9LRZ5) Phospholipase D p1 (EC 3.1.4.4) (AtPLDp1) (...	27	9.8
56	TOR3A_RAT (Q5M936) Torsin-3A precursor (Torsin family 3 member A)	27	9.8

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  139 bits (350), Expect = 2e-33
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 125 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 184

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 185 ESGNAGE 191



 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 45/77 (58%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAPTG GTHEA LSSYEYVSQGLRKYDFDNTMGGFYIA  F  +      +       
Sbjct: 85  LFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPN 144

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 145 IKIPLILGIWGGKGQGK 161

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  135 bits (341), Expect = 2e-32
 Identities = 63/67 (94%), Positives = 67/67 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAF+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 137 PAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 196

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 197 ESGNAGE 203



 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 32/77 (41%), Positives = 39/77 (50%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP   GTH A +SSYEY+S GLR+   DN   GFYIA  F  +      +       
Sbjct: 99  LFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITKNFMTLPN 156

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 157 IKVPLILGIWGGKGQGK 173

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  135 bits (340), Expect = 3e-32
 Identities = 62/67 (92%), Positives = 67/67 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAF+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 139 PAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 198

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 199 ESGNAGE 205



 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 32/77 (41%), Positives = 42/77 (54%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP   GTH A +SS++Y+S GLR+Y+FDN   GFYIA  F  +      +       
Sbjct: 99  LFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPN 158

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 159 IKVPLILGVWGGKGQGK 175

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  134 bits (338), Expect = 4e-32
 Identities = 63/67 (94%), Positives = 67/67 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 135 PAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 194

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 195 ESGNAGE 201



 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 34/77 (44%), Positives = 43/77 (55%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP   GTH A +SSY+Y+SQGLR+Y+ DN M GFYIA  F  +      +       
Sbjct: 95  LFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPN 154

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 155 IKIPLILGIWGGKGQGK 171

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  134 bits (338), Expect = 4e-32
 Identities = 63/67 (94%), Positives = 67/67 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 135 PAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 194

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 195 ESGNAGE 201



 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 34/77 (44%), Positives = 43/77 (55%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP   GTH A +SSY+Y+SQGLR+Y+ DN M GFYIA  F  +      +       
Sbjct: 95  LFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPN 154

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 155 IKIPLILGIWGGKGQGK 171

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  133 bits (335), Expect = 1e-31
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGEL
Sbjct: 135 PAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL 194

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 195 ESGNAGE 201



 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 37/77 (48%), Positives = 44/77 (57%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           +FQAP G GTH A LSSYEYVSQGLR+Y+ DN M GFYIA  F  +      +       
Sbjct: 95  VFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPN 154

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 155 IKVPLILGIWGGKGQGK 171

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  133 bits (335), Expect = 1e-31
 Identities = 61/67 (91%), Positives = 66/67 (98%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGEL
Sbjct: 134 PAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL 193

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 194 ESGNAGE 200



 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 37/92 (40%), Positives = 46/92 (50%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAPTG GTH A ++SYEYVSQ L+ Y  DN + GFYIA  F  +      +       
Sbjct: 94  LFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPN 153

Query: 182 HQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQP 277
            + P  LG  G +G  K        R+ G  P
Sbjct: 154 IKVPLILGVWGGKGQGKSFQCELVFRKMGINP 185

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  132 bits (333), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 192 ESGNAGE 198



 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 35/77 (45%), Positives = 43/77 (55%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP G GTH A LSSYEY+S GLR Y +DN + GFYIA  F  +     ++       
Sbjct: 92  LFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPN 151

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 152 IKVPLILGVWGGKGQGK 168

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  132 bits (333), Expect = 2e-31
 Identities = 61/67 (91%), Positives = 66/67 (98%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGEL
Sbjct: 133 PAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGEL 192

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 193 ESGNAGE 199



 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 34/77 (44%), Positives = 41/77 (53%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP   GTH    SS+EY SQGLRKYD DN +G FYIA  F  +      +   +   
Sbjct: 93  LFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPN 152

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 153 IKIPLILGVWGGKGQGK 169

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  132 bits (332), Expect = 2e-31
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = +3

Query: 129 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 308
           FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELES
Sbjct: 133 FMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 192

Query: 309 GNAGE 323
           GNAGE
Sbjct: 193 GNAGE 197



 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 36/77 (46%), Positives = 44/77 (57%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP GDGTH A LSSY+Y+SQG + Y+FDN M GFYIA  F  +      +       
Sbjct: 91  LFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPN 150

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 151 IKVPLILGIWGGKGQGK 167

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  131 bits (330), Expect = 4e-31
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGEL
Sbjct: 139 PAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGEL 198

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 199 ESGNAGE 205



 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 40/92 (43%), Positives = 48/92 (52%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAPTG GTH A L SYEYVSQGLR+Y+ DN + GFYIA  F  +      +       
Sbjct: 99  LFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPN 158

Query: 182 HQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQP 277
            + P  LG  G +G  K        R+ G  P
Sbjct: 159 IKVPLILGIWGGKGQGKSFQCELVFRKMGINP 190

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  131 bits (330), Expect = 4e-31
 Identities = 61/64 (95%), Positives = 64/64 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 123 PAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 182

Query: 303 ESGN 314
           ESGN
Sbjct: 183 ESGN 186



 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 42/77 (54%), Positives = 47/77 (61%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP GDGTHEA LSSYEY+SQGLRKYDFDNTM G YIA  F  +      +       
Sbjct: 83  LFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPN 142

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 143 IKVPLILGIWGGKGQGK 159

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  131 bits (329), Expect = 5e-31
 Identities = 61/64 (95%), Positives = 64/64 (100%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           P+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 126 PSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185

Query: 303 ESGN 314
           ESGN
Sbjct: 186 ESGN 189



 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/77 (57%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAPTGDGTHEA LSSYEY+SQGLR YDFDNTMGGFYIA  F  +      +       
Sbjct: 86  LFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISKNFMTLPN 145

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 146 IKVPLILGIWGGKGQGK 162

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  130 bits (328), Expect = 6e-31
 Identities = 61/67 (91%), Positives = 66/67 (98%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGEL
Sbjct: 135 PAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGEL 194

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 195 ESGNAGE 201



 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 35/77 (45%), Positives = 44/77 (57%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAP G GTH A +SSYEY+S GLR+Y+FDN M G+YIA  F  +      +       
Sbjct: 95  LFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPN 154

Query: 182 HQDPTHLGYLGRQGSRK 232
            + P  LG  G +G  K
Sbjct: 155 MKVPLILGIWGGKGQGK 171

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  130 bits (326), Expect = 1e-30
 Identities = 59/67 (88%), Positives = 65/67 (97%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           P+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGEL
Sbjct: 139 PSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL 198

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 199 ESGNAGE 205



 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 41/92 (44%), Positives = 49/92 (53%)
 Frame = +2

Query: 2   LFQAPTGDGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPAQ 181
           LFQAPTG GTH A L SYEYVSQGLR+Y+ DNT+ GFYIA  F  +      +       
Sbjct: 99  LFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPN 158

Query: 182 HQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQP 277
            + P  LG  G +G  K        R+ G  P
Sbjct: 159 IKVPLILGVWGGKGQGKSFQCELVFRKMGINP 190

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  114 bits (286), Expect = 5e-26
 Identities = 50/67 (74%), Positives = 60/67 (89%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K+GI PI+MSAGEL
Sbjct: 108 PAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGEL 167

Query: 303 ESGNAGE 323
           ESGNAGE
Sbjct: 168 ESGNAGE 174



 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   LFQAPTG-DGTHEAXLSSYEYVSQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKLHDPA 178
           LFQ   G  GTH A LSS EY+SQ   +  F+N   GFYI+  F  +      +   D  
Sbjct: 69  LFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 126

Query: 179 QHQDPTHLGYLGRQGSRK 232
           + + P  LG  G +G  K
Sbjct: 127 KIKVPLILGIWGGKGQGK 144

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           P F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S GEL
Sbjct: 7   PRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGEL 66

Query: 303 ESGNAGE 323
           ES +AG+
Sbjct: 67  ESPDAGD 73

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = +3

Query: 123 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           P F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S GEL
Sbjct: 7   PRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGEL 66

Query: 303 ESGNAGE 323
           ES +AG+
Sbjct: 67  ESPDAGD 73

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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 192 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 192 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 143  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 316
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209

Query: 317  W 319
            W
Sbjct: 1210 W 1210

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>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 143  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 316
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984

Query: 317  W 319
            W
Sbjct: 1985 W 1985

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 143  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 316
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985

Query: 317  W 319
            W
Sbjct: 1986 W 1986

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>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 271 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 134
           M I++ TSS W   P PL PPQ+P +   ++  R  +   + T S S
Sbjct: 49  MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94

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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 186 KIPLILGIWGGKGQGKSFQCELVFAKMG 269
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30

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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 162 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54

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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 192 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           PL + I G    GK  QCEL+  K G+  + +SAG+L
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98

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>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 192 PLILGIWGGKGQGKSFQCELVFAKMGINPI 281
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 192 PLILGIWGGKGQGKSFQCELVFAKMGINPI 281
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>KAD_CYPCA (P12115) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 193

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           IK   I+ + GG G GK  QCE +  K G     +S+G+L
Sbjct: 4   IKDAKIVFVVGGPGSGKGTQCEKIVEKYGYT--HLSSGDL 41

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>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 198

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 198 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           I+ I GG G GK  QCE +  K G     +S GEL
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGEL 45

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>URK_CLOPE (Q8XJI6) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 287
           +K P+ +GI GG G GKS   + ++ + G + I M
Sbjct: 1   MKRPIFIGITGGTGSGKSTIAKEIYRQFGEDCIAM 35

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>KAD1_PIG (P00571) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNA 317
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A
Sbjct: 5   LKKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSA 52

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>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNA 317
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A
Sbjct: 5   LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA 52

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>KAD1_CHICK (P05081) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 168 MTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           M+   +K   I+ + GG G GK  QCE +  K G     +S G+L
Sbjct: 1   MSTEKLKHHKIIFVVGGPGSGKGTQCEKIVHKYGYT--HLSTGDL 43

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>KAD1_BOVIN (P00570) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNA 317
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSA 52

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>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 193

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 198 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           I+ + GG G GK  QCE +  K G     +S GEL
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGEL 41

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>KAD_PRUAR (O24464) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 231

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 156 SKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           S++ +  P+   P +  + GG G GK  QC  +    G   +  SAG+L
Sbjct: 35  SESEIPTPSKGSPFVTFVLGGPGSGKGTQCAKIVEAFGFTHV--SAGDL 81

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>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNA 317
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA 52

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>KAD1_RAT (P39069) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           +K   I+ + GG G GK  QCE +  K G     +S G+L
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVQKYGYT--HLSTGDL 42

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>KAD1_MOUSE (Q9R0Y5) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           +K   I+ + GG G GK  QCE +  K G     +S G+L
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVQKYGYT--HLSTGDL 42

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>COPD_RAT (Q66H80) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
           (Archain)
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 275 VDAHLGEHKLTLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRKRCRSLPWC 96
           ++  L E  L L    +T+  P          G G  V GE+D +  H+SR+   +L WC
Sbjct: 393 IEYELQEDNLELNDVVITIPLPS---------GVGAPVIGEIDGEYRHDSRR--NTLEWC 441

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>COPD_PONPY (Q5RA77) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
           (Archain)
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 275 VDAHLGEHKLTLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRKRCRSLPWC 96
           ++  L E  L L    +T+  P          G G  V GE+D +  H+SR+   +L WC
Sbjct: 393 IEYELQEDNLELNDVVITIPLPS---------GVGAPVIGEIDGEYRHDSRR--NTLEWC 441

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>COPD_MOUSE (Q5XJY5) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
           (Archain)
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 275 VDAHLGEHKLTLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRKRCRSLPWC 96
           ++  L E  L L    +T+  P          G G  V GE+D +  H+SR+   +L WC
Sbjct: 393 IEYELQEDNLELNDVVITIPLPS---------GVGAPVIGEIDGEYRHDSRR--NTLEWC 441

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>COPD_HUMAN (P48444) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
           (Archain)
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 275 VDAHLGEHKLTLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRKRCRSLPWC 96
           ++  L E  L L    +T+  P          G G  V GE+D +  H+SR+   +L WC
Sbjct: 393 IEYELQEDNLELNDVVITIPLPS---------GVGAPVIGEIDGEYRHDSRR--NTLEWC 441

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>COPD_BOVIN (P53619) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
           (Archain)
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 275 VDAHLGEHKLTLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRKRCRSLPWC 96
           ++  L E  L L    +T+  P          G G  V GE+D +  H+SR+   +L WC
Sbjct: 393 IEYELQEDNLELNDVVITIPLPS---------GVGAPVIGEIDGEYRHDSRR--NTLEWC 441

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>COA2_SV40 (P03093) Coat protein VP2 [Contains: Coat protein VP3]|
          Length = 351

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = +3

Query: 93  TTPWEASTSLP-----AFMDKLVVHLSKNFMTLPNIKIPLILGIWG 215
           T  WEA +  P      F++K       N  T P   +PL+LG++G
Sbjct: 258 TERWEAQSQSPNVQSGEFIEKFEAPGGANQRTAPQWMLPLLLGLYG 303

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>KAD_TRYBR (O61069) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
           (AK)
          Length = 209

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +3

Query: 189 IPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           IPL + I G  G GK  QC+ +  ++G+  +++S+G++
Sbjct: 48  IPLQIFIAGPAGSGKRTQCKNIADRLGV--VLISSGQV 83

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>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase) (UMP/CMP kinase)
          Length = 202

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 186 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 302
           K P ++ + GG G GK  QC  +    G     +SAG+L
Sbjct: 12  KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDL 48

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>COAE_PSESM (Q888U3) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 168 MTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPI 281
           MT P+ K P ILG+ GG G GKS   +  F  +GI+ +
Sbjct: 1   MTHPDQK-PWILGLTGGIGSGKSAAAQ-CFIDLGIDTV 36

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>EFTS_RAT (Q9QYU2) Elongation factor Ts, mitochondrial precursor (EF-Ts)|
           (EF-TsMt) (2A3-2)
          Length = 324

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 65  SQGLRKYDFDNTMGGFYIASCFHGQACCPSLQKL 166
           +  L++  +     GFY+ S  HG+   PSLQ L
Sbjct: 195 NMSLKRAAWVKVPSGFYVGSYVHGEMQSPSLQNL 228

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>ISPG_RHOPA (Q6NCF3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 441

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 75  CGSTTSTTPWEASTSLPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGK 233
           CG TTSTT  E + S+  F+   +      +  + N+ + ++  I  G G+ K
Sbjct: 323 CGRTTSTTFQELARSIQDFIRDEMPEWRSRYPGVENLNVAVMGCIVNGPGESK 375

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>UCK_CAEEL (Q17413) Probable uridine-cytidine kinase (EC 2.7.1.48) (UCK)|
           (Uridine monophosphokinase) (Cytidine monophosphokinase)
          Length = 248

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 183 IKIPLILGIWGGKGQGKSFQCELVFAKMGIN 275
           +K+PL++G+ GG   GKS   E +   +  N
Sbjct: 5   LKLPLLIGVAGGTSCGKSTIVERIIENLNAN 35

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>TOR3A_MOUSE (Q9ER38) Torsin-3A precursor (Torsin family 3 member A)|
           (ATP-dependent interferon-responsive protein)
          Length = 385

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 138 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 254
           KLV+   K ++ +P +   L L   G  G GK+F   ++
Sbjct: 130 KLVLRAVKGYLEMPQVGKALALSFHGWSGTGKNFLARIL 168

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>PLDP1_ARATH (Q9LRZ5) Phospholipase D p1 (EC 3.1.4.4) (AtPLDp1) (Phospholipase|
           D1 PHOX and PX containing domain) (Phospholipase D zeta
           1) (PLDzeta1)
          Length = 1096

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 151 ISPKTS*PCPTSRSHSSWVSGEARVKEN-HSS 243
           + P+TS  C   RS S W +G ++V+E+ HS+
Sbjct: 732 VGPRTSCRCQIIRSVSQWSAGTSQVEESIHSA 763

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>TOR3A_RAT (Q5M936) Torsin-3A precursor (Torsin family 3 member A)|
          Length = 395

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 138 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 254
           KLV+   K ++ +P +   L L   G  G GK+F   ++
Sbjct: 140 KLVLEAVKGYLEMPQVGKALALSFHGWSGTGKNFVARML 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,530,834
Number of Sequences: 219361
Number of extensions: 958396
Number of successful extensions: 3086
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3083
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result