ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal5a04 |
|---|---|
| Clone Library Name | barley_pub |
>VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| Length = 182 Score = 224 bits (570), Expect = 2e-58 Identities = 99/149 (66%), Positives = 125/149 (83%) Frame = +3 Query: 171 VLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITR 350 +LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK+L D+HI R Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60 Query: 351 GEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFK 530 G++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++GHTH+F+ Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120 Query: 531 AYKHEGGVVINPGSATGAHSSITYDVNPS 617 A++HE INPGSATGA++++ ++ PS Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPS 149
>VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| (hVPS29) (PEP11) Length = 182 Score = 224 bits (570), Expect = 2e-58 Identities = 99/149 (66%), Positives = 125/149 (83%) Frame = +3 Query: 171 VLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITR 350 +LVL LGDLHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK+L D+HI R Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60 Query: 351 GEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFK 530 G++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++GHTH+F+ Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120 Query: 531 AYKHEGGVVINPGSATGAHSSITYDVNPS 617 A++HE INPGSATGA++++ ++ PS Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPS 149
>PEP11_YEAST (P38759) Protein PEP11| Length = 282 Score = 107 bits (267), Expect = 3e-23 Identities = 72/174 (41%), Positives = 93/174 (53%), Gaps = 25/174 (14%) Frame = +3 Query: 171 VLVLALGDLHIPHRAPDLPAKFKSML-VPGKIQHIICTGNLCIKEVHDYLK---SLCPDL 338 +L+LAL D HIP RA DLP KFK +L VP KI + GN + +D+LK + ++ Sbjct: 1 MLLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNI 58 Query: 339 HITRGEYDEDARYPETKT------------------VTIGQFKLGLCHGHQVVPWGDLDS 464 I RGE+D + P TK + G K+G C G+ VVP D S Sbjct: 59 TIVRGEFD-NGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLS 117 Query: 465 LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSS---ITYDVNPS 617 L L RQLDVDIL+ G TH +AY EG +NPGS TGA ++ I +DV S Sbjct: 118 LLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171
>Y1774_METTH (O27802) Putative metallophosphoesterase MTH1774 (EC 3.1.4.-)| Length = 172 Score = 68.6 bits (166), Expect = 2e-11 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%) Frame = +3 Query: 171 VLVLALGDLHIPHRAPDLP-AKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHIT 347 +L+ + D HIP RA ++P A F + ++ I+ G+L ++ L++L P + Sbjct: 1 MLIGVISDTHIPDRASEIPEAVFDAFR---DVELILHAGDLTSPDILTELETLAP-VECV 56 Query: 348 RGEYDED--ARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTH 521 +G D P ++ I F++GL HG +V P GD L L +L D+L++GHTH Sbjct: 57 QGNMDRHYGIETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTH 115 Query: 522 QFKAYKHEGGVVINPGSAT 578 Q + E V++NPGS T Sbjct: 116 QPFIRELEDMVLLNPGSPT 134
>Y623_METJA (Q58040) Putative metallophosphoesterase MJ0623 (EC 3.1.4.-)| Length = 192 Score = 62.8 bits (151), Expect = 8e-10 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 1/137 (0%) Frame = +3 Query: 171 VLVLALGDLHIPHRAPDLP-AKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHIT 347 +L+ + D H+ RA +LP A F + II G++ KE+ D LK L + + Sbjct: 34 MLIGVISDTHLYDRAFELPKAVFDEF---SNVDLIIHCGDVTDKEILDSLKDLAKVVAV- 89 Query: 348 RGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQF 527 +G D P + + I K+G+ HG V P GD L +L +++ VD+L++GHTH Sbjct: 90 KGNMDY-LNLPRKEILEINDIKIGVIHGDVVYPRGDRLKLRLLGKEMGVDVLISGHTHTP 148 Query: 528 KAYKHEGGVVINPGSAT 578 +++NPGS T Sbjct: 149 FIDDCRDILLLNPGSPT 165
>Y207_MYCGE (P47449) Putative metallophosphoesterase MG207 (EC 3.1.4.-)| Length = 163 Score = 34.7 bits (78), Expect = 0.25 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Frame = +3 Query: 381 ETKTVTIGQFKLGLCHGHQ-----VVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHE 545 E + +GQ L HGHQ + W L L + +Q D+L+ GH+H K Sbjct: 60 EIEIFQLGQINFVLMHGHQAPRDNLKKWYQL--LVLKAQQYPCDVLIFGHSHIEYTNKIN 117 Query: 546 GGVVINPGS------ATGAHSSITYDVN 611 +INPGS T S T+ VN Sbjct: 118 MIQLINPGSLQLPRNQTNTPSYCTFIVN 145
>YSNB_BACSU (P94559) Putative metallophosphoesterase ysnB (EC 3.1.4.-)| Length = 171 Score = 33.9 bits (76), Expect = 0.42 Identities = 20/77 (25%), Positives = 36/77 (46%) Frame = +3 Query: 342 ITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTH 521 + +G D + + +T G K+ + HGH L ++ +L D++ GH+H Sbjct: 52 VVKGNCDFAGDFKDELLLTAGSRKILVTHGHLHGIKQTLLNVYYRAEELGADVICFGHSH 111 Query: 522 QFKAYKHEGGVVINPGS 572 + G ++INPGS Sbjct: 112 IAGSEVLRGKLMINPGS 128
>FTSK_CHLTE (Q8KBK0) DNA translocase ftsK| Length = 804 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = +3 Query: 159 SNPMVLVLALGDLHIPHRAPDLPAKFKSMLV-PGKIQHIICTGNLCIK-EVHDYLKSLCP 332 S P+V+ + ++ P AP P + M++ PG + +K HD++K P Sbjct: 260 SEPVVIPAEVEEIRTPEPAPVRPEEGPEMIIKPGVQEAEADLDERALKVRTHDHVKYRFP 319 Query: 333 DLHITRGEYDEDARYPE 383 + + R DED Y E Sbjct: 320 SIDLLRRPKDEDESYDE 336
>G7C_HUMAN (Q9Y334) Protein G7c precursor| Length = 852 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 9/41 (21%) Frame = +2 Query: 188 GRSAHPAP---------CARPARQVQVHARPGQDPAHHLHR 283 GR A+P P + PA QV+ H P Q PAHH +R Sbjct: 810 GREANPVPPTHAFLRLLVSAPAPQVRNHYFPSQGPAHHPYR 850
>PCP_MYCTU (P0A5R4) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = +2 Query: 392 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 556 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 557 HQPWLSHGRPQQHHI 601 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PCP_MYCBO (P0A5R5) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = +2 Query: 392 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 556 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 557 HQPWLSHGRPQQHHI 601 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 387 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 12/61 (19%) Frame = +2 Query: 149 RSPIKSNGAGLGAGRSAH-----------PAPCARPARQVQVH-ARPGQDPAHHLHREPL 292 RS +S+G G + SA PAP PAR V A P PA H H P Sbjct: 131 RSNRRSSGFGAASAASAAAPAAPTSSSRAPAPTTAPARAVPTRTAAPATAPAAHAHHAPA 190 Query: 293 H 295 H Sbjct: 191 H 191
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = +2 Query: 110 GLRDSDHTTTQPPRSPIKSNGAGL-----GAGRSAHPAPCARPARQVQVHARPGQDP 265 G+R H PP SP+ + G G+ ++ P P + P+ Q+ + PG P Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAP 153
>CJ035_HUMAN (Q96D05) Protein C10orf35| Length = 121 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = +2 Query: 89 RVLGEQSGLRDSD---HTTTQPPRSPIKSNGAGLGAGRSAHPAPCARPA-RQVQVHARPG 256 R+L ++D D TTTQPPR I H AP P RQ Q AR G Sbjct: 3 RILANGEIVQDDDPRVRTTTQPPRGSIPRQ----SFFNRGHGAPPGGPGPRQQQAGARLG 58 Query: 257 --QDPAHHLHREPLHQG 301 Q P + L+R+ ++ G Sbjct: 59 AAQSPFNDLNRQLVNMG 75
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = +1 Query: 496 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTST 612 TSSSP T SS S+ +SST A + T+ S TST Sbjct: 208 TSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTST 246
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = +2 Query: 425 PWPSGCS--MGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 550 P P G S G PGLP + G GHP P +G + G Sbjct: 1130 PGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDG 1173
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 565 P AR P G S G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQG-SRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAP 398
>P936_METJA (Q58346) Phosphodiesterase MJ0936 (EC 3.1.4.-)| Length = 166 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +3 Query: 390 TVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPG 569 +V I K + HGH L M + D+++ GHTH+ + + +VINPG Sbjct: 85 SVEIDDLKFFITHGHHQ------SVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPG 138 Query: 570 SATG 581 G Sbjct: 139 ECCG 142
>GAT14_ARATH (Q9FH57) GATA transcription factor 14| Length = 339 Score = 30.8 bits (68), Expect = 3.6 Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 9/146 (6%) Frame = -2 Query: 511 PVTRMSTSSCR*SI----ARESRSPHGTT*WPWHSPSLNWPIVTVLVSG*RASSSYSPLV 344 PVT ++ +C S AR R+ +G W S S + P SG +SSS P Sbjct: 150 PVTAVTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSS----SGSTSSSSSGPSS 205 Query: 343 MWRSGQRLLR*S*TSLMQRFP----VQMMCWILPGTSMDLNLAGRSGARCGMCRSPSAKT 176 W SG LL TS FP + + G L R + CG+ ++P + Sbjct: 206 PWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQ-PQRKCSHCGVQKTPQWRA 264 Query: 175 STIGFDWRSRWLC-GCVIRIPQPALL 101 +G ++ LC C +R LL Sbjct: 265 GPMG----AKTLCNACGVRYKSGRLL 286
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 4.7 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +2 Query: 464 PSDASAAAGCGHPRHRAHPSVQGLQARGG-CRHQPWLSHGR 583 PS + + HP H AHPS L + GG H W HGR Sbjct: 55 PSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPHSGW-GHGR 94
>TF2B_PYRAE (Q8ZWS3) Transcription initiation factor IIB (TFIIB)| Length = 333 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/56 (25%), Positives = 33/56 (58%) Frame = -1 Query: 365 LIIFTSGNVEIRTKAFKVVVNFLDAEVPGADDVLDLARDEHGLELGGQVGRTVRDV 198 L+ +T + + +++++ L+ +VP +D +L ++R L+L G+V +T D+ Sbjct: 210 LVRYTKASRREVARCYRLLLRELNVKVPISDPILYISRIAEQLKLSGEVVKTAIDI 265
>HXD13_CARPS (Q5EU41) Homeobox protein Hox-D13| Length = 333 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 568 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 174 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 233 Query: 569 LSHGRPQQHHI*RQPEP 619 + +PQ H + P Sbjct: 234 CAKDQPQGSHFWKSSFP 250
>HXD13_HUMAN (P35453) Homeobox protein Hox-D13 (Hox-4I)| Length = 335 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 568 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 176 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 235 Query: 569 LSHGRPQQHHI*RQPEP 619 + +PQ H + P Sbjct: 236 CTKDQPQGSHFWKSSFP 252
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 568 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 180 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 239 Query: 569 LSHGRPQQHHI*RQPEP 619 + +PQ H + P Sbjct: 240 CAKDQPQGSHFWKSSFP 256
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 146 PRSPIKSNGAGLGAGRSAHPAPCARPARQVQVHARPGQDPAHHLHREPLHQ 298 P P + +G RS HPAP + Q+Q P H+ P HQ Sbjct: 381 PHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQ 431
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +2 Query: 449 GRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 550 G+PG+P G G P P + GL+ GG Sbjct: 1346 GQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGG 1379
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/65 (30%), Positives = 22/65 (33%) Frame = +2 Query: 98 GEQSGLRDSDHTTTQPPRSPIKSNGAGLGAGRSAHPAPCARPARQVQVHARPGQDPAHHL 277 G G + H S GAG GAG +A P P Q H P P H Sbjct: 127 GSSGGTSPTHHNNNNGEGFEPPSGGAGAGAGAAAPPPPLHH--LHPQSHPHPHPHPHSHP 184 Query: 278 HREPL 292 H L Sbjct: 185 HPHAL 189
>Y126_MYCPN (P75349) Putative metallophosphoesterase MG207 homolog (EC 3.1.4.-)| (C09_orf159) Length = 159 Score = 29.6 bits (65), Expect = 8.0 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 420 LCHGHQVVPWGDLDS----LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 572 L HGHQ P DL L + D+L+ GH+H +G VINPGS Sbjct: 73 LMHGHQA-PRHDLKQWYKMLVDQAKSYLCDVLIVGHSHIEHYETIDGIQVINPGS 126
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 8.0 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = +1 Query: 436 RLFHGATWTP*RCFSGSWMWTSSSPGTPISSRPTSTR---GVSSSTLAQPRAPTAA 594 RL G + P S S +SS+P P PTST+ SS++LA+P+AP AA Sbjct: 477 RLPSGPSLPPSSSSSSSSSSSSSAPQRP--GGPTSTQVNASSSSNSLAEPQAPQAA 530
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 565 P AR P G G PG P A AA G+P P +G G P Sbjct: 353 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 405
>SPEB_BLOFL (Q7VRG4) Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)| Length = 303 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 265 WILPGTSMDLNLAGRSGARCGMCRSPSAKTSTIGFDWRS-RW 143 W++ G D+ +GRSG+R G S + ++I W + RW Sbjct: 35 WVITGVPFDIATSGRSGSRFG---PASIRKASINLAWENCRW 73
>ILA1_CAEEL (Q21507) Probable insulin-like peptide alpha-type 1 precursor| Length = 89 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = +3 Query: 288 LCIKEVHDYLKSLCPDLHITRGEYDE-DARYPETKTVTIGQF-KLG 419 LC + +++ +CPD+ +T G+ ++ YP K V + +F K+G Sbjct: 31 LCATKAVKHIRKVCPDMCLTGGKIEKFPVFYPNFKEVEVNEFCKMG 76
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 565 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = +2 Query: 404 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 565 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,924,602 Number of Sequences: 219361 Number of extensions: 2231860 Number of successful extensions: 8567 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 7442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8515 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
