ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal5a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing prote... 33 0.54
2SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inosit... 32 2.0
3CP4G1_DROME (Q9V3S0) Cytochrome P450 4g1 (EC 1.14.-.-) (CYPIVG1) 30 4.6
4SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos... 30 4.6
5ARGD2_STAES (Q8CSG1) Acetylornithine aminotransferase 2 (EC 2.6.... 30 4.6
6ARGD2_STAEQ (Q5HP24) Acetylornithine aminotransferase 2 (EC 2.6.... 30 4.6
7SYTL2_MOUSE (Q99N50) Synaptotagmin-like protein 2 (Exophilin-4) 30 6.0
8IF2_GLOVI (Q7NH85) Translation initiation factor IF-2 30 6.0
9AMEL_MONDO (Q28462) Amelogenin 30 7.8
10MOBA_THIFE (P22898) Protein mobA (Fragment) 30 7.8
11DSG1A_MOUSE (Q61495) Desmoglein-1 alpha precursor (Dsg1-alpha) (... 30 7.8
12Y064_CHLMU (Q9PLN5) Putative phosphate permease TC0064 30 7.8

>CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing protein 6|
          Length = 1037

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 448  SCYCQVCLVRPLLCQAQQ---YQPYPELS*LPKPWQHQLSPCPSLSGTDSEPAKAHHPMA 278
            SC  Q    +P  C++ Q    QP+P  S   KP Q +  P P  S T+   AKAHH  A
Sbjct: 974  SCQSQPSQTKPSPCKSTQPKPSQPWPPQS---KPSQPR-PPQPKSSSTNPSQAKAHHSKA 1029

Query: 277  PSQRPRWH 254
              +R   H
Sbjct: 1030 GQKRGGKH 1037



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>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
 Frame = -2

Query: 560  IKLQPFT----MVLATSNAKMDILLPFVVVPDPKPLFKFKFV--MLLPSVSSTSTALPSP 399
            +K  PF      VLA S A+    +  V+ PDPK L +        + S+SS S  L  P
Sbjct: 1325 LKSDPFEDLSLSVLAVSKAQPSAQISPVLTPDPKMLIQLPSASQSKVNSLSSVSCMLTMP 1384

Query: 398  TVPALPRIELTSETLAAPAFAMPI--PFWDGFRASEGTP 288
             VP   + + +  + A P  ++P   PF D   A+ G P
Sbjct: 1385 PVPEQSKSQESVGSSANPFPSLPTRNPFTDR-TAAPGNP 1422



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>CP4G1_DROME (Q9V3S0) Cytochrome P450 4g1 (EC 1.14.-.-) (CYPIVG1)|
          Length = 556

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/79 (27%), Positives = 39/79 (49%)
 Frame = +1

Query: 358 VSEVSSILGRAGTVGLGKAVDVLDTLGSSMTNLNLNSGFGSGTTTKGNKISILAFEVANT 537
           V    +++ R G +  GK+ DV D +  +  ++ L++  G     +GNK    +FE A  
Sbjct: 172 VDHSKAVVARMG-LEAGKSFDVHDYMSQTTVDILLSTAMGVKKLPEGNK----SFEYAQA 226

Query: 538 IVKGCNLMRALSKESVKHL 594
           +V  C++   + K  VK L
Sbjct: 227 VVDMCDI---IHKRQVKLL 242



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>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
 Frame = -2

Query: 560  IKLQPFT----MVLATSNAKMDILLPFVVVPDPKPLFKFKFVMLLPSVSST-----STAL 408
            +K  PF      VLA S A+  + +  V+ PDPK L +      LPS S +     S+  
Sbjct: 1325 LKSDPFEDLSLSVLAVSKAQPSVQISPVLTPDPKMLIQ------LPSASQSQVNPLSSVS 1378

Query: 407  PSPTVPALPRIELTSETLAAPAFAMPI-----PFWDGFRASEGTP 288
              PT P  P    + E++ + A   P      PF D   A+ G P
Sbjct: 1379 CMPTRPPGPEESKSQESMGSSANPFPSLPCRNPFTDR-TAAPGNP 1422



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>ARGD2_STAES (Q8CSG1) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2)|
          Length = 375

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
 Frame = +1

Query: 358 VSEVSSILGRAGTV-----------------GLGKAVDVLDTLGSSMTNLNLNSGFGS-G 483
           V EV + +GR G +                 GLG  + +   LG    NL    G+GS G
Sbjct: 204 VDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKK--NLGHAFGYGSHG 261

Query: 484 TTTKGNKISILAFEVANTIVKGCNLMRALSKES---VKHLKEVVLHSEGV 624
           TT  GN++S+ A     +I+   +L+  +  +    +++L++ +++   V
Sbjct: 262 TTFGGNRLSLAAANQTLSIINDADLLNDVQSKGQFLIENLRKSLVNKRNV 311



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>ARGD2_STAEQ (Q5HP24) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2)|
          Length = 375

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
 Frame = +1

Query: 358 VSEVSSILGRAGTV-----------------GLGKAVDVLDTLGSSMTNLNLNSGFGS-G 483
           V EV + +GR G +                 GLG  + +   LG    NL    G+GS G
Sbjct: 204 VDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKK--NLGHAFGYGSHG 261

Query: 484 TTTKGNKISILAFEVANTIVKGCNLMRALSKES---VKHLKEVVLHSEGV 624
           TT  GN++S+ A     +I+   +L+  +  +    +++L++ +++   V
Sbjct: 262 TTFGGNRLSLAAANQTLSIINDADLLNDVQSKGQFLIENLRKSLVNKRNV 311



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>SYTL2_MOUSE (Q99N50) Synaptotagmin-like protein 2 (Exophilin-4)|
          Length = 950

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 439 SSMTNLNLNSGFGSGTTTKGNKISILAFEVANTIVKGCNLMRALSKESVKHL 594
           SS+TNL+ +SG  S ++  G+ +S+ + +  N  VKG         ES+K L
Sbjct: 610 SSLTNLSSSSGMTSLSSASGSVMSVYSGDFGNLEVKGSVQFALDYVESLKEL 661



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>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2|
          Length = 925

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 437 PSVSSTSTALPSPTVPALPRIELTSETLAAPA 342
           P+V + +  LP PT+P LP  E  +E  AAP+
Sbjct: 111 PAVPTEAQPLPIPTLPELPVPEQVAEQAAAPS 142



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>AMEL_MONDO (Q28462) Amelogenin|
          Length = 202

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 403 AQQYQPYPELS*LPKPWQHQLSPCPSLSGTDSEPAKAHHPMAPSQRPRWHQKRQ 242
           AQQ  P P+   +P P QH ++P         +P +  +   P+Q+P+ HQ  Q
Sbjct: 75  AQQPAP-PQQPVMPVPGQHPMAPTQHHQPNLPQPGQQPYQPQPAQQPQPHQPIQ 127



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>MOBA_THIFE (P22898) Protein mobA (Fragment)|
          Length = 409

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
 Frame = -3

Query: 400 QQYQPYPELS*---------LPKPWQHQLSPCPSLSGTDSEP-----AKAHHPMAPSQRP 263
           QQ++PYP+L           L + W+H+ S    + G  SEP      +A+ P    Q+ 
Sbjct: 326 QQFRPYPDLEQWQRMQKSPELAEQWRHRASEPQRIEGDRSEPPTPRDIRAYQPEIVGQQV 385

Query: 262 RWHQKRQ 242
            + +K +
Sbjct: 386 HYSRKEE 392



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>DSG1A_MOUSE (Q61495) Desmoglein-1 alpha precursor (Dsg1-alpha) (Desmoglein-1)|
            (Desmosomal glycoprotein I) (DG1) (DGI)
          Length = 1057

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 358  VSEVSSILGRAGTVGLGKAVDVLDTLGSSMTNLNLNSGFGSGTTTKGNKISILAFEVANT 537
            +SE++   G  G  G+G +  V  T+G+S T LN+      GT T G+  S      + T
Sbjct: 980  MSEIAGTAGLGGVGGIGSSGLVSTTMGASGTGLNM-----GGTATIGHMRSSSDHHFSQT 1034

Query: 538  I 540
            +
Sbjct: 1035 V 1035



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>Y064_CHLMU (Q9PLN5) Putative phosphate permease TC0064|
          Length = 426

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = +1

Query: 421 VLDTLGSSMTNLNLNSGFGSGTTTKGN--KISILAFEVANT-----IVKGCNLMRALSKE 579
           V+DT+G  +T L  + GF  G ++       S   F ++ T      V G  L R L   
Sbjct: 332 VIDTIGKKITELTPSRGFSVGMSSAITIAAASAFGFPISTTHVVVGAVLGVGLARGLQAI 391

Query: 580 SVKHLKEVVL 609
           +++ +K++VL
Sbjct: 392 NLRIIKDIVL 401


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.128    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,825,557
Number of Sequences: 219361
Number of extensions: 1431055
Number of successful extensions: 3765
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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