>gb|AY338235.1| Oryza sativa (japonica cultivar-group) putative aminotransferase
           AGD2 (AGD2) mRNA, complete cds
          Length = 1395

 Score =  119 bits (60), Expect = 2e-24
 Identities = 124/144 (86%), Gaps = 1/144 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gagattgccagaagaagggcggcgtcatctgctgaagcatcctgacgccaaaattattag 63
           ||||||||||| |||||||| || ||| |||||||||  |||||| || || ||||| ||
Sbjct: 235 gagattgccaggagaagggcagc-tcacctgctgaagtttcctgatgcgaagattataag 293

                                                                       
Query: 64  tctgggaataggtgacactactgagcccattccggaggtcataacaaatgccatggcaga 123
            || || || ||||||||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct: 294 ccttgggatcggtgacactacagagcccattccagacgtcataactaatgccatggcaga 353

                                   
Query: 124 gagggcacacgctttatccacagt 147
           ||| ||||| ||||||||||||||
Sbjct: 354 gagagcacatgctttatccacagt 377

>dbj|AK069075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007K10, full
           insert sequence
          Length = 1789

 Score =  111 bits (56), Expect = 6e-22
 Identities = 123/144 (85%), Gaps = 1/144 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gagattgccagaagaagggcggcgtcatctgctgaagcatcctgacgccaaaattattag 63
           ||||||||||| |||||||| || ||| |||||||||  |||||| || || ||||| ||
Sbjct: 283 gagattgccaggagaagggcagc-tcacctgctgaagtttcctgatgcgaagattataag 341

                                                                       
Query: 64  tctgggaataggtgacactactgagcccattccggaggtcataacaaatgccatggcaga 123
            || || || ||||||||||| ||||||||||| || |||||||| |||||||||||| |
Sbjct: 342 ccttgggatcggtgacactacagagcccattccagacgtcataactaatgccatggcaaa 401

                                   
Query: 124 gagggcacacgctttatccacagt 147
           ||| ||||| ||||||||||||||
Sbjct: 402 gagagcacatgctttatccacagt 425

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 99/117 (84%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                            
Query: 5        agattgccagaagaagggcggcgtcatctgctgaagcatcctgacgccaaaattattagt 64
                |||||||||| |||||||| || ||| |||||||||  |||||| || || ||||| || 
Sbjct: 10515607 agattgccaggagaagggcagc-tcacctgctgaagtttcctgatgcgaagattataagc 10515665

                                                                         
Query: 65       ctgggaataggtgacactactgagcccattccggaggtcataacaaatgccatggca 121
                || || || ||||||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10515666 cttgggatcggtgacactacagagcccattccagacgtcataactaatgccatggca 10515722

>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 99/117 (84%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                         
Query: 5     agattgccagaagaagggcggcgtcatctgctgaagcatcctgacgccaaaattattagt 64
             |||||||||| |||||||| || ||| |||||||||  |||||| || || ||||| || 
Sbjct: 71420 agattgccaggagaagggcagc-tcacctgctgaagtttcctgatgcgaagattataagc 71478

                                                                      
Query: 65    ctgggaataggtgacactactgagcccattccggaggtcataacaaatgccatggca 121
             || || || ||||||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 71479 cttgggatcggtgacactacagagcccattccagacgtcataactaatgccatggca 71535

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 99/117 (84%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                            
Query: 5        agattgccagaagaagggcggcgtcatctgctgaagcatcctgacgccaaaattattagt 64
                |||||||||| |||||||| || ||| |||||||||  |||||| || || ||||| || 
Sbjct: 10513708 agattgccaggagaagggcagc-tcacctgctgaagtttcctgatgcgaagattataagc 10513766

                                                                         
Query: 65       ctgggaataggtgacactactgagcccattccggaggtcataacaaatgccatggca 121
                || || || ||||||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10513767 cttgggatcggtgacactacagagcccattccagacgtcataactaatgccatggca 10513823

>gb|BT013469.1| Lycopersicon esculentum clone 132129F, mRNA sequence
          Length = 1711

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgaagcatcctgacgccaaaattattagtctgggaataggtgacactactgagcccattc 95
           |||| |||||||| ||  ||||||| || || ||||| ||||||||||| ||||||||||
Sbjct: 354 tgaaacatcctgatgctcaaattataagccttggaattggtgacactaccgagcccattc 413

                                                
Query: 96  cggaggtcataacaaatgccatggcagagagggcaca 132
           | || ||||||||   |||||||||| |||| |||||
Sbjct: 414 ctgaagtcataacttctgccatggcaaagagagcaca 450

>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             B1112E06, complete sequence
          Length = 177488

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 74    ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
             ||||||||||  ||||||||||| ||  ||||||| |||||||||||||||
Sbjct: 45836 ggtgacactatagagcccattccagatatcataactaatgccatggcagag 45786

>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0091E08, complete sequence
          Length = 119526

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 74    ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
             ||||||||||  ||||||||||| ||  ||||||| |||||||||||||||
Sbjct: 70689 ggtgacactatagagcccattccagatatcataactaatgccatggcagag 70639

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 74       ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
                ||||||||||  ||||||||||| ||  ||||||| |||||||||||||||
Sbjct: 23455176 ggtgacactatagagcccattccagatatcataactaatgccatggcagag 23455126

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 74       ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
                ||||||||||  ||||||||||| ||  ||||||| |||||||||||||||
Sbjct: 23765086 ggtgacactatagagcccattccagatatcataactaatgccatggcagag 23765036

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.029
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 74       ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
                ||||||||||  ||||||||||| ||  || |||| |||||||||||||||
Sbjct: 30070971 ggtgacactatagagcccattccagatatcgtaactaatgccatggcagag 30071021

>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541C02
          Length = 150660

 Score = 46.1 bits (23), Expect = 0.029
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 74     ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
              ||||||||||  ||||||||||| ||  || |||| |||||||||||||||
Sbjct: 147119 ggtgacactatagagcccattccagatatcgtaactaatgccatggcagag 147169

>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0076I16
          Length = 151711

 Score = 46.1 bits (23), Expect = 0.029
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 74    ggtgacactactgagcccattccggaggtcataacaaatgccatggcagag 124
             ||||||||||  ||||||||||| ||  || |||| |||||||||||||||
Sbjct: 62953 ggtgacactatagagcccattccagatatcgtaactaatgccatggcagag 63003

>emb|AL590243.5| Human DNA sequence from clone RP11-261K18 on chromosome X, complete
            sequence
          Length = 51700

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   acgccaaaattattagtctg 67
            ||||||||||||||||||||
Sbjct: 6773 acgccaaaattattagtctg 6792

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      gccagaagaagggcggcgtc 29
               ||||||||||||||||||||
Sbjct: 3539654 gccagaagaagggcggcgtc 3539673

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      agaagaagggcggcgtcatc 32
               ||||||||||||||||||||
Sbjct: 8134161 agaagaagggcggcgtcatc 8134180

>gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete sequence
          Length = 202042

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     agggcggcgtcatctgctg 37
              |||||||||||||||||||
Sbjct: 142779 agggcggcgtcatctgctg 142797

>gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome 7, complete sequence
          Length = 215384

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    aaatgccatggcagagagg 127
              |||||||||||||||||||
Sbjct: 176357 aaatgccatggcagagagg 176339

>gb|AC132248.3| Mus musculus BAC clone RP24-425H24 from chromosome 7, complete sequence
          Length = 195294

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   aaatgccatggcagagagg 127
             |||||||||||||||||||
Sbjct: 29569 aaatgccatggcagagagg 29551

>gb|AC157545.12| Mus musculus chromosome 1, clone RP23-317L18, complete sequence
          Length = 197367

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 55    aattattagtctgggaataggtg 77
             |||||| ||||||||||||||||
Sbjct: 18286 aattatgagtctgggaataggtg 18308

>gb|AC102157.12| Mus musculus chromosome 1, clone RP23-393K4, complete sequence
          Length = 220638

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 55    aattattagtctgggaataggtg 77
             |||||| ||||||||||||||||
Sbjct: 54808 aattatgagtctgggaataggtg 54786

>gb|BT010255.1| Drosophila melanogaster RE35237 full insert cDNA
          Length = 1677

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 19  agggcggcgtcatctgctg 37
           |||||||||||||||||||
Sbjct: 667 agggcggcgtcatctgctg 649

>emb|Y00288.1|DMSNAIL Drosophila melanogaster snail protein (sna gene)
          Length = 1687

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 19  agggcggcgtcatctgctg 37
           |||||||||||||||||||
Sbjct: 683 agggcggcgtcatctgctg 665

>ref|XM_782652.1| PREDICTED: Strongylocentrotus purpuratus similar to cyclin K
           (LOC582708), mRNA
          Length = 1392

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 119 gcagagagggcacacgctttatc 141
           ||||||||||| |||||||||||
Sbjct: 305 gcagagagggctcacgctttatc 327

>gb|AC157543.8| Mus musculus chromosome 1, clone RP23-271O17, complete sequence
          Length = 223464

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 55    aattattagtctgggaataggtg 77
             |||||| ||||||||||||||||
Sbjct: 27901 aattatgagtctgggaataggtg 27879

>emb|AJ251486.1|DME251486 Drosophila melanogaster sna gene for snail protein
          Length = 11182

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 19   agggcggcgtcatctgctg 37
            |||||||||||||||||||
Sbjct: 9817 agggcggcgtcatctgctg 9799

>gb|AC104298.2| Homo sapiens chromosome 3 clone RP11-96N5, complete sequence
          Length = 175317

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    tgagcccattccggaggtc 103
             |||||||||||||||||||
Sbjct: 32554 tgagcccattccggaggtc 32536

>ref|NM_057384.3| Drosophila melanogaster snail CG3956-RA (sna), mRNA
          Length = 1677

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 19  agggcggcgtcatctgctg 37
           |||||||||||||||||||
Sbjct: 682 agggcggcgtcatctgctg 664

>gb|AC092797.2| Homo sapiens chromosome 3 clone RP11-452E8, complete sequence
          Length = 200278

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tgagcccattccggaggtc 103
              |||||||||||||||||||
Sbjct: 167097 tgagcccattccggaggtc 167079

>gb|AC093096.1| Drosophila melanogaster, chromosome 2L, region 35D-35E, BAC clone
            BACR24H10, complete sequence
          Length = 165190

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   agggcggcgtcatctgctg 37
            |||||||||||||||||||
Sbjct: 6742 agggcggcgtcatctgctg 6760

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 130     acacgctttatccacagtc 148
               |||||||||||||||||||
Sbjct: 2192832 acacgctttatccacagtc 2192814

>gb|AC092130.3| Homo sapiens chromosome 16 clone RP11-148M9, complete sequence
          Length = 170514

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     aggtcataacaaatgccat 117
              |||||||||||||||||||
Sbjct: 122822 aggtcataacaaatgccat 122804

>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence
          Length = 220183

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 98     gaggtcataacaaatgccatggcagag 124
              |||||||| | ||||||||||||||||
Sbjct: 103590 gaggtcattaaaaatgccatggcagag 103616

>gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56 of 83 of the complete
              sequence
          Length = 261949

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     agggcggcgtcatctgctg 37
              |||||||||||||||||||
Sbjct: 212020 agggcggcgtcatctgctg 212038


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,094,180
Number of Sequences: 3902068
Number of extensions: 1094180
Number of successful extensions: 71435
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71187
Number of HSP's gapped (non-prelim): 246
length of query: 149
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 128
effective length of database: 17,151,101,840
effective search space: 2195341035520
effective search space used: 2195341035520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)