ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4k07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 382 gttcttactagggttcttcttggctgcaattccctggtatattggtgcttttcttctatt 441 ||||||||| ||||| |||||||||||| ||||||||||| |||||||||| ||||||| Sbjct: 14657530 gttcttactggggtttttcttggctgcacttccctggtatgctggtgcttttattctatt 14657471 Query: 442 ctttgttgctttggatcaccgggagaagcctggattgattgcctgcac 489 ||||||||||||||| ||| | |||||||||||||||||||| ||||| Sbjct: 14657470 ctttgttgctttggaccacagagagaagcctggattgattgcatgcac 14657423 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 269 gctcagggcgttgttgctttcccgtgcactatccagcagcaggtcttggtggagggc 325 ||||||||||||||||| |||||||||||| | ||||||| |||| | ||||||||| Sbjct: 14658230 gctcagggcgttgttgccttcccgtgcactgtgcagcagctggtcctcgtggagggc 14658174 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 497 ggtatttttgcggtagtccctttcatgctcaatggcataagaatgcgccctttct 551 |||||||||| | |||| |||||||| ||||||||||||||| ||| ||||||| Sbjct: 14653075 ggtatttttgtgctagttcctttcatcctcaatggcataagagtgcatcctttct 14653021 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ccctcccccataccaccaccaccactacggcac 201 ||||||||| |||||||| |||||||||||||| Sbjct: 14658456 ccctcccccttaccaccatcaccactacggcac 14658424 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 accaccaccaccactacggcac 201 |||||||||||||||||||||| Sbjct: 8091601 accaccaccaccactacggcac 8091580 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 5817100 tcccctcctcctccgccgccc 5817120 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccctttcttttcttgagaat 563 |||||||||||||||||||| Sbjct: 25546469 ccctttcttttcttgagaat 25546488
>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0027A16 Length = 129953 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 382 gttcttactagggttcttcttggctgcaattccctggtatattggtgcttttcttctatt 441 ||||||||| ||||| |||||||||||| ||||||||||| |||||||||| ||||||| Sbjct: 111791 gttcttactggggtttttcttggctgcacttccctggtatgctggtgcttttattctatt 111732 Query: 442 ctttgttgctttggatcaccgggagaagcctggattgattgcctgcac 489 ||||||||||||||| ||| | |||||||||||||||||||| ||||| Sbjct: 111731 ctttgttgctttggaccacagagagaagcctggattgattgcatgcac 111684 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 269 gctcagggcgttgttgctttcccgtgcactatccagcagcaggtcttggtggagggc 325 ||||||||||||||||| |||||||||||| | ||||||| |||| | ||||||||| Sbjct: 112491 gctcagggcgttgttgccttcccgtgcactgtgcagcagctggtcctcgtggagggc 112435 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 497 ggtatttttgcggtagtccctttcatgctcaatggcataagaatgcgccctttct 551 |||||||||| | |||| |||||||| ||||||||||||||| ||| ||||||| Sbjct: 107336 ggtatttttgtgctagttcctttcatcctcaatggcataagagtgcatcctttct 107282 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ccctcccccataccaccaccaccactacggcac 201 ||||||||| |||||||| |||||||||||||| Sbjct: 112717 ccctcccccttaccaccatcaccactacggcac 112685
>dbj|AP004804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0680B05 Length = 138741 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 382 gttcttactagggttcttcttggctgcaattccctggtatattggtgcttttcttctatt 441 ||||||||| ||||| |||||||||||| ||||||||||| |||||||||| ||||||| Sbjct: 43397 gttcttactggggtttttcttggctgcacttccctggtatgctggtgcttttattctatt 43338 Query: 442 ctttgttgctttggatcaccgggagaagcctggattgattgcctgcac 489 ||||||||||||||| ||| | |||||||||||||||||||| ||||| Sbjct: 43337 ctttgttgctttggaccacagagagaagcctggattgattgcatgcac 43290 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 269 gctcagggcgttgttgctttcccgtgcactatccagcagcaggtcttggtggagggc 325 ||||||||||||||||| |||||||||||| | ||||||| |||| | ||||||||| Sbjct: 44097 gctcagggcgttgttgccttcccgtgcactgtgcagcagctggtcctcgtggagggc 44041 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 497 ggtatttttgcggtagtccctttcatgctcaatggcataagaatgcgccctttct 551 |||||||||| | |||| |||||||| ||||||||||||||| ||| ||||||| Sbjct: 38942 ggtatttttgtgctagttcctttcatcctcaatggcataagagtgcatcctttct 38888 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ccctcccccataccaccaccaccactacggcac 201 ||||||||| |||||||| |||||||||||||| Sbjct: 44323 ccctcccccttaccaccatcaccactacggcac 44291
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgccc 226 ||||||||||||||||||||||| Sbjct: 115389 tctcccctcctcctccgccgccc 115367
>ref|XM_319660.2| Anopheles gambiae str. PEST ENSANGP00000013958 (ENSANGG00000011469), partial mRNA Length = 1695 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgcccgtc 229 ||||||||||||||||||||||| Sbjct: 442 cccctcctcctccgccgcccgtc 420
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgccc 226 ||||||||||||||||||||||| Sbjct: 147285 tctcccctcctcctccgccgccc 147263
>ref|XM_641952.1| Dictyostelium discoideum hypothetical protein (DDB0190110), partial mRNA Length = 228 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 cccataccaccaccaccactac 196 |||||||||||||||||||||| Sbjct: 146 cccataccaccaccaccactac 125
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 cccccataccaccaccaccact 194 |||||||||||||||||||||| Sbjct: 109554 cccccataccaccaccaccact 109533
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 cccccataccaccaccaccact 194 |||||||||||||||||||||| Sbjct: 163905 cccccataccaccaccaccact 163926
>ref|XM_483188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 150 tctcccctcctcctccgccgcc 171
>ref|XM_483187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2067 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 250 tctcccctcctcctccgccgcc 229
>ref|XM_471149.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 37 tctcccctcctcctccgccgcc 58
>gb|AC110789.6| Homo sapiens BAC clone RP11-516D7 from 4, complete sequence Length = 181262 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ccgtgcactatccagcagcagg 311 |||||||||||||||||||||| Sbjct: 103144 ccgtgcactatccagcagcagg 103123
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 137 ctcccctccgccccgcccttcgccggcgcc 166 ||||| |||||||||||| ||||||||||| Sbjct: 2344 ctcccgtccgccccgcccctcgccggcgcc 2373
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcgccggcgcc 166 ||||| |||||||||||| ||||||||||| Sbjct: 18348 ctcccgtccgccccgcccctcgccggcgcc 18319
>gb|AC138781.4| Homo sapiens BAC clone RP11-366H4 from 4, complete sequence Length = 162771 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ccgtgcactatccagcagcagg 311 |||||||||||||||||||||| Sbjct: 145464 ccgtgcactatccagcagcagg 145443
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 148752 tctcccctcctcctccgccgcc 148773
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcgccggcgcc 166 ||||| |||||||||||| ||||||||||| Sbjct: 22165 ctcccgtccgccccgcccctcgccggcgcc 22136
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 ggcaccttctcccctcctcctc 218 |||||||||||||||||||||| Sbjct: 63267 ggcaccttctcccctcctcctc 63246
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 1853484 tctcccctcctcctccgccgcc 1853505 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcgcc 160 ||||||||||||||| |||||||| Sbjct: 23860285 ctcccctccgccccggccttcgcc 23860262 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 199 caccttctcccctcctcctccgccgccc 226 ||||| ||| |||||||||||||||||| Sbjct: 7224210 cacctcctctcctcctcctccgccgccc 7224183
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 ggcaccttctcccctcctcctc 218 |||||||||||||||||||||| Sbjct: 2882235 ggcaccttctcccctcctcctc 2882214
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 24697123 tctcccctcctcctccgccgcc 24697144
>gb|AC133529.3| Homo sapiens BAC clone RP11-458M1 from 4, complete sequence Length = 179257 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ccgtgcactatccagcagcagg 311 |||||||||||||||||||||| Sbjct: 99383 ccgtgcactatccagcagcagg 99362
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 69427 tctcccctcctcctccgccgcc 69448
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 accaccaccaccactacggcac 201 |||||||||||||||||||||| Sbjct: 115370 accaccaccaccactacggcac 115349
>dbj|AK111024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H02, full insert sequence Length = 588 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 150 tctcccctcctcctccgccgcc 171
>dbj|AK100141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011B13, full insert sequence Length = 1351 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 243 tctcccctcctcctccgccgcc 222
>dbj|AK073076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010D24, full insert sequence Length = 2066 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 249 tctcccctcctcctccgccgcc 228
>dbj|AK070089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041J01, full insert sequence Length = 1108 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tctcccctcctcctccgccgcc 225 |||||||||||||||||||||| Sbjct: 93 tctcccctcctcctccgccgcc 114
>gb|AY107889.1| Zea mays PCO115800 mRNA sequence Length = 894 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 392 gggttcttcttggctgcaattccctggtatattggtgctttt 433 ||||||||||| ||||| ||||| |||||| |||| |||||| Sbjct: 519 gggttcttctttgctgccattccatggtatcttggagctttt 560
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 ggcaccttctcccctcctcctc 218 |||||||||||||||||||||| Sbjct: 2882186 ggcaccttctcccctcctcctc 2882165
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcgccggcgcc 166 ||||| |||||||||||| ||||||||||| Sbjct: 26894 ctcccgtccgccccgcccctcgccggcgcc 26865
>emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chromosome 4, complete sequence Length = 199890 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcg 158 |||||||||||||||||||||| Sbjct: 71895 ctcccctccgccccgcccttcg 71874
>gb|AC149156.3| Xenopus tropicalis clone ISB-258L19, complete sequence Length = 70067 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ttctattctttgttgctttggatca 459 ||||||||||| ||||||||||||| Sbjct: 8603 ttctattctttattgctttggatca 8579
>ref|NM_184332.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1400 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cccctcctcctccgccgcccg 227 ||||||||||||||||||||| Sbjct: 131 cccctcctcctccgccgcccg 151
>ref|XM_464008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 123 ctcccctcctcctccgccgcc 103
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 caccttctcccctcctcctcc 219 ||||||||||||||||||||| Sbjct: 143958 caccttctcccctcctcctcc 143938
>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048K05, complete sequence Length = 104254 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 caccttctcccctcctcctcc 219 ||||||||||||||||||||| Sbjct: 16119 caccttctcccctcctcctcc 16099
>gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosome 3, complete sequence Length = 194271 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 cccccataccaccaccaccac 193 ||||||||||||||||||||| Sbjct: 106787 cccccataccaccaccaccac 106767
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 ccctcccccataccaccaccaccac 193 ||||||||| ||||||||||||||| Sbjct: 124196 ccctcccccctaccaccaccaccac 124220
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 52037 ctcccctcctcctccgccgcc 52057
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 48121 tcccctcctcctccgccgccc 48101
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 27126854 ctcccctcctcctccgccgcc 27126834 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 21355210 tcccctcctcctccgccgccc 21355190 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 3092503 ccctcctcctccgccgcccg 3092522 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 2861892 tcccctcctcctccgccgcc 2861873
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 tctcccctcctcctccgccgcccgt 228 ||||||||||||| ||||||||||| Sbjct: 216946 tctcccctcctccaccgccgcccgt 216922
>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence Length = 174522 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gggaccccacagccaagctcc 140 ||||||||||||||||||||| Sbjct: 149909 gggaccccacagccaagctcc 149929
>gb|AC092496.3| Bos taurus clone RP42-394P20, complete sequence Length = 216538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 576 tctgatgacctggaacctgga 596 ||||||||||||||||||||| Sbjct: 96716 tctgatgacctggaacctgga 96736
>emb|AL590133.32| Human DNA sequence from clone RP11-316M1 on chromosome 1 Contains the SETDB1 gene for SET domain, bifurcated 1, the LASS2 gene for LAG1 longevity assurance homolog 2 (S. cerevisiae), the ANXA9 gene for annexin A9, the gene for a novel protein (FLJ11280), the gene for TcD37 homolog (HTCD37), the BNIPL gene for BCL2/adenovirus E1B 19kD interacting protein like, the gene for a novel protein (FLJ20519), the gene for small protein effector 1 of Cdc42 (SPEC1), the gene for ALL1-fused gene from chromosome 1q (AF1Q), two novel genes, the 5' end of a novel gene (MGC29891) and two CpG islands, complete sequence Length = 192096 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 caccttctcccctcctcctcc 219 ||||||||||||||||||||| Sbjct: 57705 caccttctcccctcctcctcc 57725
>emb|AL590073.6| Human DNA sequence from clone RP11-242O9 on chromosome X, complete sequence Length = 80864 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ttactagggttcttcttggct 406 ||||||||||||||||||||| Sbjct: 45527 ttactagggttcttcttggct 45507
>gb|AC108727.6| Homo sapiens 3 BAC RP11-231L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155898 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 tttcttctattctttgttgct 451 ||||||||||||||||||||| Sbjct: 97962 tttcttctattctttgttgct 97942
>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence Length = 188847 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gggaccccacagccaagctcc 140 ||||||||||||||||||||| Sbjct: 94033 gggaccccacagccaagctcc 94013
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gggaccccacagccaagctcc 140 ||||||||||||||||||||| Sbjct: 16975997 gggaccccacagccaagctcc 16976017
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 429 cttttcttctattctttgttgcttt 453 |||||||||||||||||| |||||| Sbjct: 1170203 cttttcttctattctttgctgcttt 1170227
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcctcctccgccgcccgtcgc 231 ||||||||||||||||||||| Sbjct: 118589 tcctcctccgccgcccgtcgc 118569
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 6408790 tcccctcctcctccgccgccc 6408810
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 caccttctcccctcctcctcc 219 ||||||||||||||||||||| Sbjct: 24629782 caccttctcccctcctcctcc 24629762 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 ccctcccccataccaccaccaccac 193 ||||||||| ||||||||||||||| Sbjct: 19983032 ccctcccccctaccaccaccaccac 19983056 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gctcccctccgccccgccct 155 |||||||||||||||||||| Sbjct: 22086032 gctcccctccgccccgccct 22086051
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 27218177 ctcccctcctcctccgccgcc 27218157 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 21348239 tcccctcctcctccgccgccc 21348219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 3092614 ccctcctcctccgccgcccg 3092633 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 2862003 tcccctcctcctccgccgcc 2861984
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 1648686 ctcccctcctcctccgccgcc 1648706 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cttctcccctcctcctccgccgcc 225 |||||| ||||||||||||||||| Sbjct: 35149336 cttctcgcctcctcctccgccgcc 35149313 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gctttgttcttactagggtt 396 |||||||||||||||||||| Sbjct: 20140102 gctttgttcttactagggtt 20140083 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 cccctccgccccgcccttcgccggcgcc 166 ||||||| ||||||||||||||| |||| Sbjct: 19457150 cccctcccccccgcccttcgccgccgcc 19457177
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 42749488 ctcccctcctcctccgccgcc 42749468 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgcccg 227 ||||||||||||||||||||| Sbjct: 2381456 cccctcctcctccgccgcccg 2381436 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 35760927 ccctcctcctccgccgcccg 35760946 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 28649175 tcccctcctcctccgccgcc 28649156
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 82253 ctcccctcctcctccgccgcc 82233
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ctcccctcctcctccgccgcc 225 ||||||||||||||||||||| Sbjct: 85789 ctcccctcctcctccgccgcc 85809
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgcccg 227 ||||||||||||||||||||| Sbjct: 110506 cccctcctcctccgccgcccg 110486
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgcccg 227 ||||||||||||||||||||| Sbjct: 165040 cccctcctcctccgccgcccg 165020
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 132629 tcccctcctcctccgccgccc 132649
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 17875 tcccctcctcctccgccgccc 17895
>dbj|AP003963.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1779_B07 Length = 151427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 65357 tcccctcctcctccgccgccc 65377
>dbj|AK107820.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F12, full insert sequence Length = 755 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgccc 226 ||||||||||||||||||||| Sbjct: 254 tcccctcctcctccgccgccc 234
>dbj|AK101609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B11, full insert sequence Length = 1339 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 ccctcccccataccaccaccaccac 193 ||||||||| ||||||||||||||| Sbjct: 123 ccctcccccctaccaccaccaccac 147
>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence Length = 182658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 accccacagccaagctcccc 142 |||||||||||||||||||| Sbjct: 54178 accccacagccaagctcccc 54159
>gb|AY630349.1| Strongylocentrotus franciscanus clone 53 microsatellite sequence Length = 184 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ccccataccaccaccaccac 193 |||||||||||||||||||| Sbjct: 143 ccccataccaccaccaccac 124
>ref|XM_640296.1| Dictyostelium discoideum hypothetical protein (DDB0168626), partial mRNA Length = 1827 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 acagttgctggtatttttgc 507 |||||||||||||||||||| Sbjct: 1609 acagttgctggtatttttgc 1628
>ref|XM_637721.1| Dictyostelium discoideum spore coat protein Sp70 (DDB0185091), partial mRNA Length = 1614 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cccataccaccaccaccact 194 |||||||||||||||||||| Sbjct: 1385 cccataccaccaccaccact 1366
>ref|XM_521269.1| PREDICTED: Pan troglodytes similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) (LOC465865), mRNA Length = 1068 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 292 ttggtgcttttcttctatcctttg 315
>ref|XM_509642.1| PREDICTED: Pan troglodytes solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (LOC452553), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ccctccgccccgcccttcgc 159 |||||||||||||||||||| Sbjct: 169 ccctccgccccgcccttcgc 150
>ref|XM_474853.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 199 caccttctcccctcctcctccgccgccc 226 ||||| ||| |||||||||||||||||| Sbjct: 292 cacctcctctcctcctcctccgccgccc 319
>ref|XM_508068.1| PREDICTED: Pan troglodytes similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) (LOC450774), mRNA Length = 329 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 301 ttggtgcttttcttctatcctttg 324
>ref|XM_468422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cttctcccctcctcctccgccgcc 225 |||||| ||||||||||||||||| Sbjct: 170 cttctcgcctcctcctccgccgcc 147
>ref|XM_466072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2216 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 cccctccgccccgcccttcgccggcgcc 166 ||||||| ||||||||||||||| |||| Sbjct: 15 cccctcccccccgcccttcgccgccgcc 42
>ref|NM_190475.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 89 ccctcctcctccgccgcccg 108
>ref|XM_470253.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 38 ccctcctcctccgccgcccg 57
>ref|XM_472877.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2709 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 ctcccctccgccccgcccttcgcc 160 ||||||||||||||| |||||||| Sbjct: 1399 ctcccctccgccccggccttcgcc 1422
>gb|BT020007.1| Homo sapiens peroxiredoxin 3 mRNA, complete cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>gb|BT020006.1| Synthetic construct Homo sapiens peroxiredoxin 3 mRNA, partial cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>gb|BT020005.1| Synthetic construct Homo sapiens peroxiredoxin 3 mRNA, partial cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>gb|BT018838.1| Zea mays clone EL01N0552G11.d mRNA sequence Length = 1681 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 gcaccttctcccctcctcctccgccgcc 225 |||||| ||||||||| ||||||||||| Sbjct: 134 gcacctcctcccctccccctccgccgcc 161
>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence Length = 185997 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accttctcccctcctcctcc 219 |||||||||||||||||||| Sbjct: 80099 accttctcccctcctcctcc 80118
>gb|AY022456.1| Oryza sativa microsatellite MRG4781 containing (AGA)X15, closest to marker C1257, genomic sequence Length = 245 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 34 ccctcctcctccgccgcccg 53
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 11443 tcccctcctcctccgccgcc 11462
>gb|AC101982.9| Mus musculus chromosome 3, clone RP24-346F13, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 tttcttttcttgagaatgaatgca 570 ||||||| |||||||||||||||| Sbjct: 42124 tttctttgcttgagaatgaatgca 42101
>gb|BC007062.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:12511 IMAGE:3960644), complete cds Length = 1596 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 313 ttggtgcttttcttctatcctttg 336
>gb|BC022373.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:23923 IMAGE:4775243), complete cds Length = 1602 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 303 ttggtgcttttcttctatcctttg 326
>gb|BC021691.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:24293 IMAGE:3961379), complete cds Length = 1619 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 330 ttggtgcttttcttctatcctttg 353
>gb|BC008435.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:14634 IMAGE:4081846), complete cds Length = 1574 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 297 ttggtgcttttcttctatcctttg 320
>gb|BC059169.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:14578 IMAGE:4133576), complete cds Length = 1583 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 290 ttggtgcttttcttctatcctttg 313
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gctcccctccgccccgccct 155 |||||||||||||||||||| Sbjct: 40013 gctcccctccgccccgccct 40032
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 accccacagccaagctcccc 142 |||||||||||||||||||| Sbjct: 126689 accccacagccaagctcccc 126670
>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ctcccctcctcctccgccgc 224 |||||||||||||||||||| Sbjct: 5948 ctcccctcctcctccgccgc 5929
>gb|BC057543.1| Mus musculus lymphoid enhancer binding factor 1, mRNA (cDNA clone MGC:66504 IMAGE:6401514), complete cds Length = 2999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 470 ttctcccctcctcctccgcc 489
>gb|AC101872.7| Mus musculus chromosome 17, clone RP23-358C2, complete sequence Length = 202465 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tcccccataccaccaccacc 191 |||||||||||||||||||| Sbjct: 136073 tcccccataccaccaccacc 136092
>gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, complete sequence Length = 222106 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tcccccataccaccaccacc 191 |||||||||||||||||||| Sbjct: 65584 tcccccataccaccaccacc 65565
>gb|AC160989.2| Mus musculus BAC clone RP23-194N9 from chromosome 9, complete sequence Length = 215923 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accttctcccctcctcctcc 219 |||||||||||||||||||| Sbjct: 97138 accttctcccctcctcctcc 97157
>ref|NM_014098.2| Homo sapiens peroxiredoxin 3 (PRDX3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 1537 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 272 ttggtgcttttcttctatcctttg 295
>ref|NM_006793.2| Homo sapiens peroxiredoxin 3 (PRDX3), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 1591 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 326 ttggtgcttttcttctatcctttg 349
>emb|AL513497.21| Human DNA sequence from clone RP4-669K10 on chromosome 1 Contains the RNU17D gene for U17D small nucleolar RNA, the CHC1 gene for chromosome condensation 1, a pseudogene similar to part of peroxiredoxin 3 (PRDX3), the gene for tRNA selenocysteine associated protein (SECP43), the gene for PNAS-123 protein (LOC85028), the gene for a novel protein (MGC45806) and the 3' end of the TAF12 gene for TAF12 RNA polymerase II 20kDa TATA box binding protein (TBP)-associated factor, complete sequence Length = 135820 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 26443 ttggtgcttttcttctatcctttg 26420
>emb|AL450338.5| Human DNA sequence from clone RP11-207F8 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, complete sequence Length = 149216 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccctcccccataccaccacc 188 |||||||||||||||||||| Sbjct: 12835 ccctcccccataccaccacc 12854
>emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on chromosome 10 Contains the 5' end of a novel gene, the PRDX3 gene for peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22), the 5' end of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5), a novel gene and four CpG islands, complete sequence Length = 168528 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 15408 ttggtgcttttcttctatcctttg 15385
>emb|AL354685.17| Human DNA sequence from clone RP13-75G22 on chromosome Xq21.33-22.2 Contains the gene for a novel protein similar to envelope protein (LOC139302), a pseuodgene similar to part of NCK-associated protein 1 (NCKAP1) and a CpG island, complete sequence Length = 155166 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 ccctcccccataccaccaccacca 192 |||| ||||||||||||||||||| Sbjct: 144153 ccctgccccataccaccaccacca 144176
>emb|CR857380.1| Pongo pygmaeus mRNA; cDNA DKFZp468N2116 (from clone DKFZp468N2116) Length = 1592 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 306 ttggtgcttttcttctatcctttg 329
>emb|CR450344.1| Homo sapiens full open reading frame cDNA clone RZPDo834F012D for gene PRDX3, peroxiredoxin 3; complete cds; without stopcodon Length = 768 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 15516 ccctcctcctccgccgcccg 15535
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 ctcccctccgccccgcccttcgcc 160 ||||||||||||||| |||||||| Sbjct: 25158 ctcccctccgccccggccttcgcc 25135
>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence Length = 134892 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cataccaccaccaccactac 196 |||||||||||||||||||| Sbjct: 113382 cataccaccaccaccactac 113401
>gb|AC114668.12| Mus musculus chromosome 3, clone RP24-176P19, complete sequence Length = 183890 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 145568 ttctcccctcctcctccgcc 145587
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 3758 ccctcctcctccgccgcccg 3739
>emb|CR625139.1| full-length cDNA clone CS0DI079YP21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1539 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 308 ttggtgcttttcttctatcctttg 331
>emb|CR623202.1| full-length cDNA clone CS0DA003YO10 of Neuroblastoma of Homo sapiens (human) Length = 1502 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 304 ttggtgcttttcttctatcctttg 327
>emb|CR622960.1| full-length cDNA clone CS0DE006YC01 of Placenta of Homo sapiens (human) Length = 1488 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 248 ttggtgcttttcttctatcctttg 271
>emb|CR622286.1| full-length cDNA clone CS0DI040YL04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1541 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 308 ttggtgcttttcttctatcctttg 331
>emb|CR621242.1| full-length cDNA clone CS0DI081YJ14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1528 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 294 ttggtgcttttcttctatcctttg 317
>emb|CR621101.1| full-length cDNA clone CS0DA002YG21 of Neuroblastoma of Homo sapiens (human) Length = 1436 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 248 ttggtgcttttcttctatcctttg 271
>emb|CR618914.1| full-length cDNA clone CS0DI052YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1528 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 289 ttggtgcttttcttctatcctttg 312
>emb|CR616834.1| full-length cDNA clone CS0DH002YJ12 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1151 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 248 ttggtgcttttcttctatcctttg 271
>emb|CR614087.1| full-length cDNA clone CS0DA011YO20 of Neuroblastoma of Homo sapiens (human) Length = 1541 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 308 ttggtgcttttcttctatcctttg 331
>emb|CR612566.1| full-length cDNA clone CS0DI026YH16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1538 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 304 ttggtgcttttcttctatcctttg 327
>emb|CR609757.1| full-length cDNA clone CS0DI067YK22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1562 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 306 ttggtgcttttcttctatcctttg 329
>emb|CR609024.1| full-length cDNA clone CS0DJ015YG05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1487 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 273 ttggtgcttttcttctatcctttg 296
>emb|CR605883.1| full-length cDNA clone CS0DI008YF13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1506 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 289 ttggtgcttttcttctatcctttg 312
>emb|CR604854.1| full-length cDNA clone CS0DI004YN15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1542 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 308 ttggtgcttttcttctatcctttg 331
>emb|CR604835.1| full-length cDNA clone CS0DI065YA24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1467 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 248 ttggtgcttttcttctatcctttg 271
>emb|CR603233.1| full-length cDNA clone CS0DG003YH01 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1509 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 278 ttggtgcttttcttctatcctttg 301
>emb|CR601617.1| full-length cDNA clone CS0DM005YE17 of Fetal liver of Homo sapiens (human) Length = 1523 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 289 ttggtgcttttcttctatcctttg 312
>emb|CR597664.1| full-length cDNA clone CS0DI060YK01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1512 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 278 ttggtgcttttcttctatcctttg 301
>emb|CR597520.1| full-length cDNA clone CS0DI054YE21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1518 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 288 ttggtgcttttcttctatcctttg 311
>emb|CR596127.1| full-length cDNA clone CS0DI001YF05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1522 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 287 ttggtgcttttcttctatcctttg 310
>emb|CR595002.1| full-length cDNA clone CS0DI061YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1470 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 248 ttggtgcttttcttctatcctttg 271
>emb|CR590042.1| full-length cDNA clone CS0DM003YC04 of Fetal liver of Homo sapiens (human) Length = 1528 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 308 ttggtgcttttcttctatcctttg 331
>gb|AY072736.1| Antirrhinum majus hirzina (hirz) mRNA, complete cds Length = 1462 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cataccaccaccaccactac 196 |||||||||||||||||||| Sbjct: 129 cataccaccaccaccactac 110
>dbj|AK131979.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610034L06 product:lymphoid enhancer binding factor 1, full insert sequence Length = 2456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 446 ttctcccctcctcctccgcc 465
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtcttggtggagggcctcc 329 |||||||||||||||||||| Sbjct: 137003 ggtcttggtggagggcctcc 136984
>dbj|AK158769.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K330303I08 product:lymphoid enhancer binding factor 1, full insert sequence Length = 3636 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 446 ttctcccctcctcctccgcc 465
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cataccaccaccaccactac 196 |||||||||||||||||||| Sbjct: 1133943 cataccaccaccaccactac 1133924
>gb|AC124042.3| Oryctolagus cuniculus clone LB1-56H19, complete sequence Length = 194657 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cataccaccaccaccactac 196 |||||||||||||||||||| Sbjct: 130993 cataccaccaccaccactac 130974
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 gcaggtacacagcgcacaccacga 69 |||||||||| ||||||||||||| Sbjct: 1128340 gcaggtacaccgcgcacaccacga 1128317
>gb|AC060788.11| Homo sapiens chromosome 8, clone CTD-2008O4, complete sequence Length = 177717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tccagcagcaggtcttggtg 319 |||||||||||||||||||| Sbjct: 150242 tccagcagcaggtcttggtg 150261
>dbj|AK029296.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832416C21 product:unclassifiable, full insert sequence Length = 3074 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 1333 ttctcccctcctcctccgcc 1314
>gb|AC159097.5| Mus musculus chromosome 8, clone RP24-310O9, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 accttctcccctcctcctcc 219 |||||||||||||||||||| Sbjct: 5211 accttctcccctcctcctcc 5192
>dbj|AK028246.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000002B05 product:lymphoid enhancer binding factor 1, full insert sequence Length = 3117 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttctcccctcctcctccgcc 222 |||||||||||||||||||| Sbjct: 86 ttctcccctcctcctccgcc 105
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 4983450 tcccctcctcctccgccgcc 4983431
>gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, complete sequence Length = 168698 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 tttcttttcttgagaatgaa 566 |||||||||||||||||||| Sbjct: 41339 tttcttttcttgagaatgaa 41358
>dbj|AK222659.1| Homo sapiens mRNA for peroxiredoxin 3 isoform a precursor variant, clone: CBL07612 Length = 1178 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 288 ttggtgcttttcttctatcctttg 311
>gb|BC093551.1| Xenopus laevis Sox-D protein, mRNA (cDNA clone MGC:115030 IMAGE:6946836), complete cds Length = 1160 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgccc 226 |||||||||||||||||||| Sbjct: 53 cccctcctcctccgccgccc 34
>gb|AC115584.2| Dictyostelium discoideum chromosome 2 map complement(3622543-3568102) strain AX4, complete sequence Length = 54441 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cccataccaccaccaccact 194 |||||||||||||||||||| Sbjct: 18149 cccataccaccaccaccact 18130
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 acagttgctggtatttttgc 507 |||||||||||||||||||| Sbjct: 116931 acagttgctggtatttttgc 116912
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cccctcctcctccgccgccc 226 |||||||||||||||||||| Sbjct: 931792 cccctcctcctccgccgccc 931773
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 133848 tcccctcctcctccgccgcc 133829
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 32249 tcccctcctcctccgccgcc 32230
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence Length = 175075 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 ccctcccccataccaccaccacca 192 |||||||||| ||||||||||||| Sbjct: 67777 ccctcccccagaccaccaccacca 67754
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 cccctccgccccgcccttcgccggcgcc 166 ||||||| ||||||||||||||| |||| Sbjct: 74677 cccctcccccccgcccttcgccgccgcc 74704
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 164264 ccctcctcctccgccgcccg 164283
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 25385 ccctcctcctccgccgcccg 25404
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gctttgttcttactagggtt 396 |||||||||||||||||||| Sbjct: 13408 gctttgttcttactagggtt 13389
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccctttcttttcttgagaat 563 |||||||||||||||||||| Sbjct: 64786 ccctttcttttcttgagaat 64805
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gctttgttcttactagggtt 396 |||||||||||||||||||| Sbjct: 88625 gctttgttcttactagggtt 88606
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 cccctccgccccgcccttcgccggcgcc 166 ||||||| ||||||||||||||| |||| Sbjct: 142641 cccctcccccccgcccttcgccgccgcc 142668
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cttctcccctcctcctccgccgcc 225 |||||| ||||||||||||||||| Sbjct: 44692 cttctcgcctcctcctccgccgcc 44669
>gb|AY888324.1| Synthetic construct Homo sapiens clone FLH008674.01X peroxiredoxin 3 (PRDX3) mRNA, complete cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>dbj|AK109385.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A07, full insert sequence Length = 1579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 88 ccctcctcctccgccgcccg 107
>dbj|AK109336.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C12, full insert sequence Length = 1880 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 15 tcccctcctcctccgccgcc 34
>gb|AY890924.1| Synthetic construct Homo sapiens clone FLH008670.01L peroxiredoxin 3 (PRDX3) mRNA, partial cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>gb|AY890923.1| Synthetic construct Homo sapiens clone FLH008669.01L peroxiredoxin 3 (PRDX3) mRNA, partial cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 283 ttggtgcttttcttctatcctttg 306
>dbj|AK122101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K05, full insert sequence Length = 1584 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 90 ccctcctcctccgccgcccg 109
>dbj|AK121301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110M10, full insert sequence Length = 2216 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 cccctccgccccgcccttcgccggcgcc 166 ||||||| ||||||||||||||| |||| Sbjct: 15 cccctcccccccgcccttcgccgccgcc 42
>dbj|AK120725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L20, full insert sequence Length = 1661 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 104 ccctcctcctccgccgcccg 123
>dbj|AK130897.1| Homo sapiens cDNA FLJ27387 fis, clone UBA09535, highly similar to Mitochondrial thioredoxin-dependent peroxide reductase precursor Length = 1552 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 305 ttggtgcttttcttctatcctttg 328
>dbj|AK110278.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E01, full insert sequence Length = 2170 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gcggcgtcggggtcggctgg 376 |||||||||||||||||||| Sbjct: 746 gcggcgtcggggtcggctgg 765
>dbj|AK107997.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-G02, full insert sequence Length = 1095 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cttctcccctcctcctccgccgcc 225 |||||| ||||||||||||||||| Sbjct: 170 cttctcgcctcctcctccgccgcc 147
>dbj|AK106410.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H10, full insert sequence Length = 1947 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 199 caccttctcccctcctcctccgccgccc 226 ||||| ||| |||||||||||||||||| Sbjct: 418 cacctcctctcctcctcctccgccgccc 445
>dbj|AK106074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H10, full insert sequence Length = 1608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 87 ccctcctcctccgccgcccg 106
>dbj|AK101559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050C24, full insert sequence Length = 1635 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 88 ccctcctcctccgccgcccg 107
>dbj|AK073138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024E01, full insert sequence Length = 1902 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 32 tcccctcctcctccgccgcc 51
>ref|NM_211927.1| Eremothecium gossypii AGR199Wp (AGR199W), mRNA Length = 879 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 gcaggtacacagcgcacaccacga 69 |||||||||| ||||||||||||| Sbjct: 484 gcaggtacaccgcgcacaccacga 461
>dbj|AK072552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B08, full insert sequence Length = 2568 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 ctcccctccgccccgcccttcgcc 160 ||||||||||||||| |||||||| Sbjct: 278 ctcccctccgccccgaccttcgcc 301
>dbj|AK070875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075H05, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 1284 tcccctcctcctccgccgcc 1265
>gb|BC002685.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:3522 IMAGE:3607558), complete cds Length = 1564 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 289 ttggtgcttttcttctatcctttg 312
>gb|BC009601.1| Homo sapiens peroxiredoxin 3, transcript variant 1, mRNA (cDNA clone MGC:14693 IMAGE:4134666), complete cds Length = 1567 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 290 ttggtgcttttcttctatcctttg 313
>dbj|AK060677.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B10, full insert sequence Length = 1645 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccctcctcctccgccgcccg 227 |||||||||||||||||||| Sbjct: 89 ccctcctcctccgccgcccg 108
>gb|AY103539.1| Zea mays PCO103478 mRNA sequence Length = 2010 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 gcaccttctcccctcctcctccgccgcc 225 |||||| ||||||||| ||||||||||| Sbjct: 351 gcacctcctcccctccccctccgccgcc 378
>tpe|BN000565.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx36 gene for class III peroxidase 36 precursor, exons 1-2 Length = 1564 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 1364 tcccctcctcctccgccgcc 1345
>emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chromosome 17, complete sequence Length = 220042 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tcccccataccaccaccacc 191 |||||||||||||||||||| Sbjct: 71368 tcccccataccaccaccacc 71387
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcccctcctcctccgccgcc 225 |||||||||||||||||||| Sbjct: 5002234 tcccctcctcctccgccgcc 5002215
>emb|AL021707.2|HS508I15 Human DNA sequence from clone RP3-508I15 on chromosome 22q12-13, complete sequence Length = 131353 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 95703 ttggtgcttttcttctatcctttg 95680
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 199 caccttctcccctcctcctccgccgccc 226 ||||| ||| |||||||||||||||||| Sbjct: 87947 cacctcctctcctcctcctccgccgccc 87920
>gb|AC134614.4| Mus musculus BAC clone RP23-148D12 from 14, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cataccaccaccaccactac 196 |||||||||||||||||||| Sbjct: 164682 cataccaccaccaccactac 164701
>emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chromosome 4, complete sequence Length = 210380 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 ccctcccccataccaccaccacca 192 ||||||||||| |||||||||||| Sbjct: 113496 ccctcccccatcccaccaccacca 113519
>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence Length = 198471 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accttctcccctcctcctcc 219 |||||||||||||||||||| Sbjct: 8081 accttctcccctcctcctcc 8100
>gb|DQ298752.1| Homo sapiens peroxiredoxin 3 (PRDX3) gene, complete cds Length = 14661 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 5939 ttggtgcttttcttctatcctttg 5962
>emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chromosome 1, complete sequence Length = 187131 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ttttcttgagaatgaatgca 570 |||||||||||||||||||| Sbjct: 86324 ttttcttgagaatgaatgca 86343
>gb|M26238.1|DDISP70A D.discoideum spore coat protein SP70 gene, complete cds Length = 2377 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cccataccaccaccaccact 194 |||||||||||||||||||| Sbjct: 1966 cccataccaccaccaccact 1947
>dbj|D00591.1|HUMRCC1 Homo sapiens RCC1 gene, exons 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, complete cds Length = 34641 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 21200 ttggtgcttttcttctatcctttg 21177
>dbj|D49396.1|HUMAOP1 Human mRNA for Apo1_Human (MER5(Aop1-Mouse)-like protein), complete cds Length = 1542 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 ttggtgcttttcttctattctttg 446 |||||||||||||||||| ||||| Sbjct: 289 ttggtgcttttcttctatcctttg 312 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,005,808 Number of Sequences: 3902068 Number of extensions: 7005808 Number of successful extensions: 264701 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 260363 Number of HSP's gapped (non-prelim): 4325 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
