Clone Information

BLAST Search Result

Clone Name	baal4j22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_464252.1\| Oryza sativa (japonica cultivar-group), mRNA	359	6e-96
2	dbj\|AK069128.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	359	6e-96
3	gb\|BT024113.1\| Zea mays clone EL01N0515B10 mRNA sequence	264	3e-67
4	gb\|AY107910.1\| Zea mays PCO130814 mRNA sequence	212	9e-52
5	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	210	3e-51
6	dbj\|AP005071.3\| Oryza sativa (japonica cultivar-group) genomic D...	210	3e-51
7	dbj\|AP005804.2\| Oryza sativa (japonica cultivar-group) genomic D...	210	3e-51
8	gb\|AC146786.1\| Pan troglodytes BAC clone RP43-34C4 from UL, comp...	42	1.8
9	gb\|AC004869.1\| Homo sapiens PAC clone RP4-732C22 from 7, complet...	42	1.8
10	emb\|AL159974.21\| Human DNA sequence from clone RP11-255E21 on ch...	42	1.8
11	gb\|AC079853.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	7.2
12	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	40	7.2
13	gb\|AC123056.4\| Mus musculus BAC clone RP23-182H4 from chromosome...	40	7.2
14	gb\|AC116575.4\| Mus musculus BAC clone RP23-263I24 from 9, comple...	40	7.2
15	gb\|AC102567.8\| Mus musculus chromosome 9, clone RP23-224F1, comp...	40	7.2
16	emb\|AL512593.9\| Human DNA sequence from clone RP11-508N12 on chr...	40	7.2
17	emb\|AL646101.7\| Mouse DNA sequence from clone RP23-145E14 on chr...	40	7.2
18	gb\|AC121763.1\| Genomic sequence for Glycine max (soybean), clone...	40	7.2
19	gb\|AF391290.1\| Branchiostoma floridae cosmid MPMGc117C0475, part...	40	7.2
20	gb\|AC097279.5\| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom...	40	7.2
21	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.2
22	dbj\|BA000028.3\| Oceanobacillus iheyensis HTE831 DNA, complete ge...	40	7.2
23	emb\|CR847539.12\| Zebrafish DNA sequence from clone DKEY-96K10 in...	40	7.2
24	gb\|AC007059.1\|AC007059 Homo sapiens chromosome 19, cosmid R26549...	40	7.2
25	gb\|AC006128.1\|AC006128 Homo sapiens chromosome 19, cosmid F20900...	40	7.2
26	gb\|AC145929.4\| Gallus gallus BAC clone CH261-31A6 from chromosom...	40	7.2
27	dbj\|AP002358.3\| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	7.2

>ref|XM_464252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4275

 Score =  359 bits (181), Expect = 6e-96
 Identities = 439/525 (83%), Gaps = 3/525 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 64
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 2322 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 2380

                                                                        
Query: 65   tcatcctcttatgaaacgatattaactgaactttctactctcataagcgacgtcgatttg 124
              ||||||||||||||| ||  |  ||||||||||||| ||||| || ||| | ||||||
Sbjct: 2381 --atcctcttatgaaactattattgctgaactttctacgctcattagtgacatggatttg 2438

                                                                        
Query: 125  catatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaagatccgtt 184
            || ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |||| | 
Sbjct: 2439 cacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaatccatc 2498

                                                                        
Query: 185  aaaaatgttggnttagctgtgatacataaagntttgcctgaggcccttactttgatcagg 244
             ||||||||||  | || ||||   | || | ||||||  ||||||||| ||||||||||
Sbjct: 2499 caaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttgatcagg 2558

                                                                        
Query: 245  agtgctctgttgcaaggacaagcactacaggcgctccagaagttttttgctgcactggtg 304
            |||||||| |||||||| || ||||||||||| || ||||  ||||||||| ||||||| 
Sbjct: 2559 agtgctctcttgcaagggcaggcactacaggcactgcagagattttttgcttcactggtc 2618

                                                                        
Query: 305  cagtctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaacca 364
            ||||||||||||| ||||||||| ||||||||| | || |||||||| ||||| ||||||
Sbjct: 2619 cagtctgcaaatacaagctttgacactttgttggattctcttatttctactgctaaacca 2678

                                                                        
Query: 365  tcacagtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtg 424
            || |||||||| || ||| |||| || ||| | |  || |||||||||||||||||||||
Sbjct: 2679 tcgcagtcaggtggacttgccaaacaagcattgtcttccattgcacagtgtgttgctgtg 2738

                                                                        
Query: 425  ctatgcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcatc 484
             | |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| 
Sbjct: 2739 ttgtgcttagcagctggggatcagaagtgtgcctcaactattgaaatgcttaaaggcatt 2798

                                                         
Query: 485  ctaaatgatgacagttctactaattctgccaaacaacacatggcc 529
             |||| ||||||||  ||||||||||||| ||||| |||||||||
Sbjct: 2799 ttaaaagatgacagcactactaattctgctaaacagcacatggcc 2843

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>dbj|AK069128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N20, full
            insert sequence
          Length = 4275

 Score =  359 bits (181), Expect = 6e-96
 Identities = 439/525 (83%), Gaps = 3/525 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 64
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 2322 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 2380

                                                                        
Query: 65   tcatcctcttatgaaacgatattaactgaactttctactctcataagcgacgtcgatttg 124
              ||||||||||||||| ||  |  ||||||||||||| ||||| || ||| | ||||||
Sbjct: 2381 --atcctcttatgaaactattattgctgaactttctacgctcattagtgacatggatttg 2438

                                                                        
Query: 125  catatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaagatccgtt 184
            || ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |||| | 
Sbjct: 2439 cacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaatccatc 2498

                                                                        
Query: 185  aaaaatgttggnttagctgtgatacataaagntttgcctgaggcccttactttgatcagg 244
             ||||||||||  | || ||||   | || | ||||||  ||||||||| ||||||||||
Sbjct: 2499 caaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttgatcagg 2558

                                                                        
Query: 245  agtgctctgttgcaaggacaagcactacaggcgctccagaagttttttgctgcactggtg 304
            |||||||| |||||||| || ||||||||||| || ||||  ||||||||| ||||||| 
Sbjct: 2559 agtgctctcttgcaagggcaggcactacaggcactgcagagattttttgcttcactggtc 2618

                                                                        
Query: 305  cagtctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaacca 364
            ||||||||||||| ||||||||| ||||||||| | || |||||||| ||||| ||||||
Sbjct: 2619 cagtctgcaaatacaagctttgacactttgttggattctcttatttctactgctaaacca 2678

                                                                        
Query: 365  tcacagtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtg 424
            || |||||||| || ||| |||| || ||| | |  || |||||||||||||||||||||
Sbjct: 2679 tcgcagtcaggtggacttgccaaacaagcattgtcttccattgcacagtgtgttgctgtg 2738

                                                                        
Query: 425  ctatgcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcatc 484
             | |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| 
Sbjct: 2739 ttgtgcttagcagctggggatcagaagtgtgcctcaactattgaaatgcttaaaggcatt 2798

                                                         
Query: 485  ctaaatgatgacagttctactaattctgccaaacaacacatggcc 529
             |||| ||||||||  ||||||||||||| ||||| |||||||||
Sbjct: 2799 ttaaaagatgacagcactactaattctgctaaacagcacatggcc 2843

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>gb|BT024113.1| Zea mays clone EL01N0515B10 mRNA sequence
          Length = 1856

 Score =  264 bits (133), Expect = 3e-67
 Identities = 320/383 (83%)
 Strand = Plus / Plus

                                                                       
Query: 147 aactgtgttgcacaataatggtcgacagaagatccgttaaaaatgttggnttagctgtga 206
           |||| ||||||||||||||||| ||||||| |||  ||  ||| ||||| |||||||| |
Sbjct: 11  aactttgttgcacaataatggttgacagaaaatctattctaaacgttggtttagctgtta 70

                                                                       
Query: 207 tacataaagntttgcctgaggcccttactttgatcaggagtgctctgttgcaaggacaag 266
            | |||||| ||||||| ||||||||  ||||||||||||||| ||||||||||| || |
Sbjct: 71  gagataaagttttgcctcaggcccttgttttgatcaggagtgccctgttgcaagggcagg 130

                                                                       
Query: 267 cactacaggcgctccagaagttttttgctgcactggtgcagtctgcaaatataagctttg 326
           |||| ||||| || |||| |||||||||  |||| || || ||||||||||  |||||||
Sbjct: 131 cactgcaggctcttcagaggttttttgcatcacttgttcaatctgcaaatactagctttg 190

                                                                       
Query: 327 aaactttgttgaactcccttatttccactgccaaaccatcacagtcaggcggtctttcca 386
           |  |||||||| | |||||||||||  |||| || |||||||| |||||  ||||| | |
Sbjct: 191 atgctttgttggagtcccttatttctgctgctaagccatcacattcaggtagtcttgcta 250

                                                                       
Query: 387 agcaggcactattctctattgcacagtgtgttgctgtgctatgcttagcagctggtgata 446
           |||| ||||| |  ||||||||  ||||||||||||| ||||||||||||||||||||  
Sbjct: 251 agcaagcactgtcttctattgctaagtgtgttgctgttctatgcttagcagctggtgacc 310

                                                                       
Query: 447 agaagtgtgcatcaactattgaaatgcttaaaggcatcctaaatgatgacagttctacta 506
           ||||||||||||| || ||||||||||||||||||||  | || || |||||  ||||||
Sbjct: 311 agaagtgtgcatctacaattgaaatgcttaaaggcattttgaaagacgacagcactacta 370

                                  
Query: 507 attctgccaaacaacacatggcc 529
           | ||||| |||||||||||||||
Sbjct: 371 actctgctaaacaacacatggcc 393

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>gb|AY107910.1| Zea mays PCO130814 mRNA sequence
          Length = 1777

 Score =  212 bits (107), Expect = 9e-52
 Identities = 284/341 (83%), Gaps = 2/341 (0%)
 Strand = Plus / Plus

                                                                       
Query: 191 gttggnttagctgtgatacataaagntttgcctgaggcccttactttgatcaggagtgct 250
           ||||| |||||||| | | |||||| ||||||| ||||||||  ||||||||||||||| 
Sbjct: 15  gttggtttagctgttagagataaagttttgcctcaggcccttgttttgatcaggagtgcc 74

                                                                       
Query: 251 ctgttgcaaggacaag-cactacagg-cgctccagaagttttttgctgcactggtgcagt 308
           ||||||||||| | || |||| |||| | || |||| |||||||||  |||| || || |
Sbjct: 75  ctgttgcaagggccaggcactgcagggctcttcagaggttttttgcatcacttgttcaat 134

                                                                       
Query: 309 ctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaaccatcac 368
           |||||||||  ||||||||  |||||||| | |||||||||||  |||| || |||||||
Sbjct: 135 ctgcaaatactagctttgatgctttgttggagtcccttatttctgctgctaagccatcac 194

                                                                       
Query: 369 agtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtgctat 428
           | |||||  ||||| | ||||| ||||| |  ||||||||  ||||||||||||| ||||
Sbjct: 195 attcaggtagtcttgctaagcaagcactgtcttctattgctaagtgtgttgctgttctat 254

                                                                       
Query: 429 gcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcatcctaa 488
           ||||||||||||||||  ||||||||||||| || ||||||||||||||||||||  | |
Sbjct: 255 gcttagcagctggtgaccagaagtgtgcatctacaattgaaatgcttaaaggcattttga 314

                                                    
Query: 489 atgatgacagttctactaattctgccaaacaacacatggcc 529
           | || |||||  ||||||| ||||| |||||||||||||||
Sbjct: 315 aagacgacagcactactaactctgctaaacaacacatggcc 355

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  210 bits (106), Expect = 3e-51
 Identities = 196/226 (86%)
 Strand = Plus / Minus

                                                                           
Query: 287     ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 346
               ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 3662420 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 3662361

                                                                           
Query: 347     atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 406
               ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 3662360 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 3662301

                                                                           
Query: 407     gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 466
               |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 3662300 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 3662241

                                                             
Query: 467     gaaatgcttaaaggcatcctaaatgatgacagttctactaattctg 512
               |||||||||||||||||  |||| ||||||||  ||||||||||||
Sbjct: 3662240 gaaatgcttaaaggcattttaaaagatgacagcactactaattctg 3662195



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                           
Query: 119     gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 178
               |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 3662666 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 3662607

                                                                           
Query: 179     tccgttaaaaatgttggnttagctgtgatacataaagntttgcctgaggcccttactttg 238
               ||| |  ||||||||||  | || ||||   | || | ||||||  ||||||||| ||||
Sbjct: 3662606 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 3662547

                                                    
Query: 239     atcaggagtgctctgttgcaaggacaagcactacagg 275
               |||||||||||||| |||||||| || ||||||||||
Sbjct: 3662546 atcaggagtgctctcttgcaagggcaggcactacagg 3662510



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                           
Query: 5       aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 64
               |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 3662851 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 3662793

                                                           
Query: 65      tcatcctcttatgaaacgatattaactgaactttctactctcat 108
                 ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 3662792 --atcctcttatgaaactattattgctgaactttctacgctcat 3662751

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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0669G09
          Length = 140067

 Score =  210 bits (106), Expect = 3e-51
 Identities = 196/226 (86%)
 Strand = Plus / Minus

                                                                        
Query: 287  ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 346
            ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 2737 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 2678

                                                                        
Query: 347  atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 406
            ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 2677 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 2618

                                                                        
Query: 407  gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 466
            |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 2617 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 2558

                                                          
Query: 467  gaaatgcttaaaggcatcctaaatgatgacagttctactaattctg 512
            |||||||||||||||||  |||| ||||||||  ||||||||||||
Sbjct: 2557 gaaatgcttaaaggcattttaaaagatgacagcactactaattctg 2512



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                        
Query: 119  gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 178
            |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 2983 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 2924

                                                                        
Query: 179  tccgttaaaaatgttggnttagctgtgatacataaagntttgcctgaggcccttactttg 238
            ||| |  ||||||||||  | || ||||   | || | ||||||  ||||||||| ||||
Sbjct: 2923 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 2864

                                                 
Query: 239  atcaggagtgctctgttgcaaggacaagcactacagg 275
            |||||||||||||| |||||||| || ||||||||||
Sbjct: 2863 atcaggagtgctctcttgcaagggcaggcactacagg 2827



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                        
Query: 5    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 64
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 3168 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 3110

                                                        
Query: 65   tcatcctcttatgaaacgatattaactgaactttctactctcat 108
              ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 3109 --atcctcttatgaaactattattgctgaactttctacgctcat 3068

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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score =  210 bits (106), Expect = 3e-51
 Identities = 196/226 (86%)
 Strand = Plus / Minus

                                                                          
Query: 287    ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 346
              ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 143710 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 143651

                                                                          
Query: 347    atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 406
              ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 143650 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 143591

                                                                          
Query: 407    gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 466
              |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 143590 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 143531

                                                            
Query: 467    gaaatgcttaaaggcatcctaaatgatgacagttctactaattctg 512
              |||||||||||||||||  |||| ||||||||  ||||||||||||
Sbjct: 143530 gaaatgcttaaaggcattttaaaagatgacagcactactaattctg 143485



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                          
Query: 119    gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 178
              |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 143956 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 143897

                                                                          
Query: 179    tccgttaaaaatgttggnttagctgtgatacataaagntttgcctgaggcccttactttg 238
              ||| |  ||||||||||  | || ||||   | || | ||||||  ||||||||| ||||
Sbjct: 143896 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 143837

                                                   
Query: 239    atcaggagtgctctgttgcaaggacaagcactacagg 275
              |||||||||||||| |||||||| || ||||||||||
Sbjct: 143836 atcaggagtgctctcttgcaagggcaggcactacagg 143800



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                          
Query: 5      aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 64
              |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 144141 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 144083

                                                          
Query: 65     tcatcctcttatgaaacgatattaactgaactttctactctcat 108
                ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 144082 --atcctcttatgaaactattattgctgaactttctacgctcat 144041

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>gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, complete sequence
          Length = 167484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   aactttgttgaactcccttat 348
             |||||||||||||||||||||
Sbjct: 58371 aactttgttgaactcccttat 58351

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>gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complete sequence
          Length = 159044

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   aactttgttgaactcccttat 348
             |||||||||||||||||||||
Sbjct: 51954 aactttgttgaactcccttat 51934

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>emb|AL159974.21| Human DNA sequence from clone RP11-255E21 on chromosome 13 Contains the
             3' end of the C13orf10 gene for chromosome 13 open reading
             frame 10, complete sequence
          Length = 165326

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 339   actcccttatttccactgccaaacc 363
             ||||||||| |||||||||||||||
Sbjct: 75148 actcccttaattccactgccaaacc 75172

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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   taactgaactttctactctc 106
            ||||||||||||||||||||
Sbjct: 3300 taactgaactttctactctc 3319

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       taactgaactttctactctc 106
                ||||||||||||||||||||
Sbjct: 15741500 taactgaactttctactctc 15741519

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>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete
            sequence
          Length = 183076

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  tttgttgaactcccttattt 350
            ||||||||||||||||||||
Sbjct: 9456 tttgttgaactcccttattt 9437

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>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    tgccaaaccatcacagtcag 374
              ||||||||||||||||||||
Sbjct: 203564 tgccaaaccatcacagtcag 203583

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>gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, complete sequence
          Length = 198097

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   tgccaaaccatcacagtcag 374
             ||||||||||||||||||||
Sbjct: 40826 tgccaaaccatcacagtcag 40845

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>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
             novel genes, the gene for a novel zinc finger protein
             (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 148816

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   tgaggcccttactttgatca 242
             ||||||||||||||||||||
Sbjct: 36960 tgaggcccttactttgatca 36941

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>emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chromosome 11, complete
              sequence
          Length = 169742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 482    atcctaaatgatgacagttctactaatt 509
              |||||||||||| |||||||||| ||||
Sbjct: 119546 atcctaaatgattacagttctaccaatt 119573

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>gb|AC121763.1| Genomic sequence for Glycine max (soybean), clone UMb001-26P13,
             complete sequence
          Length = 69692

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     taggcaggcaacattgggaa 23
             ||||||||||||||||||||
Sbjct: 14974 taggcaggcaacattgggaa 14955

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>gb|AF391290.1| Branchiostoma floridae cosmid MPMGc117C0475, partial sequence
          Length = 47933

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 366  cacagtcaggcggtctttcc 385
            ||||||||||||||||||||
Sbjct: 9175 cacagtcaggcggtctttcc 9156

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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
              sequence
          Length = 178748

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     taactgaactttctactctc 106
              ||||||||||||||||||||
Sbjct: 151454 taactgaactttctactctc 151473

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       taactgaactttctactctc 106
                ||||||||||||||||||||
Sbjct: 15736034 taactgaactttctactctc 15736053

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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 172    cagaagatccgttaaaaatgttgg 195
              ||||||||||| ||||||||||||
Sbjct: 986972 cagaagatccggtaaaaatgttgg 986995

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>emb|CR847539.12| Zebrafish DNA sequence from clone DKEY-96K10 in linkage group 7,
             complete sequence
          Length = 104861

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ctggtgcagtctgcaaatat 318
             ||||||||||||||||||||
Sbjct: 59966 ctggtgcagtctgcaaatat 59985

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>gb|AC007059.1|AC007059 Homo sapiens chromosome 19, cosmid R26549, complete sequence
          Length = 32303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   tggttgtcacatatgggagt 55
            ||||||||||||||||||||
Sbjct: 4740 tggttgtcacatatgggagt 4721

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>gb|AC006128.1|AC006128 Homo sapiens chromosome 19, cosmid F20900, complete sequence
          Length = 39852

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tggttgtcacatatgggagt 55
             ||||||||||||||||||||
Sbjct: 26697 tggttgtcacatatgggagt 26678

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>gb|AC145929.4| Gallus gallus BAC clone CH261-31A6 from chromosome unknown, complete
             sequence
          Length = 172539

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gcactggtgcagtctgcaaa 315
             ||||||||||||||||||||
Sbjct: 50512 gcactggtgcagtctgcaaa 50493

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>dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1036E20, complete
              sequences
          Length = 190904

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    tgcatcaactattgaaatgcttaa 477
              ||||||||||||||||||| ||||
Sbjct: 133062 tgcatcaactattgaaatgattaa 133085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,490,779
Number of Sequences: 3902068
Number of extensions: 4490779
Number of successful extensions: 70772
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70640
Number of HSP's gapped (non-prelim): 116
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result