ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4j20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA, complete cds Length = 990 Score = 876 bits (442), Expect = 0.0 Identities = 445/446 (99%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 538 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 598 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 658 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 718 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctactaactagctgccatgcgtgcgtgg 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 719 ggcgacctcgtcgtcgacgacgccgacatcggctactaagtagctgccatgcgtgcgtgg 778 Query: 301 ttggctagtcggtcccaagtcagatgggcagcggaggatgagggcttgtggtgtcgatct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 ttggctagtcggtcccaagtcagatgggcagcggaggatgagggcttgtggtgtcgatct 838 Query: 361 gtgtgggcttggtgtaggagctgataggatcatggagaaatggaacctctcttgtattta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 gtgtgggcttggtgtaggagctgataggatcatggagaaatggaacctctcttgtattta 898 Query: 421 agaaactgaacccaatcttgtataac 446 |||||||||||||||||||||||||| Sbjct: 899 agaaactgaacccaatcttgtataac 924
>ref|NM_184976.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 561 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 562 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 621 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 622 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 681 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 682 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 741 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 742 ggcaacctcgtcgtcgacgacgctgacatcggctact 778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 867 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 921
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Minus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31969750 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 31969691 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 31969690 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 31969631 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31969630 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 31969571 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 31969570 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 31969511 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 31969510 ggcaacctcgtcgtcgacgacgctgacatcggctact 31969474 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 31969273 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 31969219
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Minus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61702 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 61643 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 61642 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 61583 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 61582 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 61523 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 61522 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 61463 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 61462 ggcaacctcgtcgtcgacgacgctgacatcggctact 61426 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 61225 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 61171
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Minus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32060262 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 32060203 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 32060202 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 32060143 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32060142 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 32060083 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 32060082 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 32060023 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 32060022 ggcaacctcgtcgtcgacgacgctgacatcggctact 32059986 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 32059785 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 32059731
>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full insert sequence Length = 967 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 525 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 526 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 585 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 586 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 645 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 646 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 705 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 706 ggcaacctcgtcgtcgacgacgctgacatcggctact 742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 836 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 890
>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full insert sequence Length = 997 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 560 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 561 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 620 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 621 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 680 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 681 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 740 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 741 ggcaacctcgtcgtcgacgacgctgacatcggctact 777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 866 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 920
>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full insert sequence Length = 990 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 548 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 549 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 608 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 609 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 668 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 669 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 728 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 729 ggcaacctcgtcgtcgacgacgctgacatcggctact 765 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 859 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 913
>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA, complete cds Length = 996 Score = 391 bits (197), Expect = e-105 Identities = 257/277 (92%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 ggcctcccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccg 541 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 542 ggcttgctcttcctctacatcgccggctggatcggctgggtcggcaggagctacctcatc 601 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 602 gccatcagcggcgagaagaagccggccatgagggagatcatcatcgacgtcgagctcgcc 661 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 | || | || |||| ||||| |||||||||||||||||||| ||||| |||||||||| | Sbjct: 662 gtcaagctcctcccgagggggttcatctggcccgtcgccgcctaccgtgagctcatcacc 721 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctact 277 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 722 ggcaacctcgtcgtcgacgacgctgacatcggctact 758 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 371 ggtgtaggagctgataggatcatggagaaatggaacctctcttgtatttaagaaa 425 ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| Sbjct: 847 ggtgtagaagctgataggatcatggaggaatggaagatctgttgtacttaagaaa 901
>gb|AY103687.1| Zea mays PCO106710 mRNA sequence Length = 1242 Score = 379 bits (191), Expect = e-102 Identities = 264/287 (91%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 1 ggcctgccccacctcatcgtcagcggcgaccagcggcactggggcgagttcatcaccccc 60 |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 517 ggcctgccgcacctcatcgtcagcggcgaccagcggcactggggcgagttcgtcaccccg 576 Query: 61 ggcgtgctcttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatc 120 ||| |||||||||||||||||||||| |||||||| |||||||| | |||||||||||| Sbjct: 577 ggcctgctcttcctctacatcgccgggtggatcgggtgggtcggcaggagctacctcatc 636 Query: 121 gccgtcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 gccatcagcggcgagaagaagcccgccatgagggagatcatcatcgacgtcgagctcgcc 696 Query: 181 gccaggatcatccccaggggcttcatctggcccgtcgccgcataccgcgagctcatcaac 240 || | || |||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 697 acccgcctcctccccagggggttcatctggcccgtcgcggcctaccgcgagctcatcaac 756 Query: 241 ggcgacctcgtcgtcgacgacgccgacatcggctactaactagctgc 287 || |||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 757 ggagacctcgtcgtcgacgacaaggacatcggctact-actagctgc 802
>gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction center subunit III (CipPsaF) mRNA, complete cds; nuclear gene for chloroplast product Length = 885 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 10 cacctcatcgtcagcggcgaccagcggcactggggcgagttcatcacccccggcgtgctc 69 ||||| ||||| ||||| |||||| |||||||||||||||||||||| || || | || Sbjct: 491 cacctgatcgtgagcggggaccagaggcactggggcgagttcatcactcctgggttccta 550 Query: 70 ttcctctacatcgccggctggatcggctgggtcggacgcagctacctcatcgccgtcagc 129 ||||| ||||||||||| |||||||| ||||| || || |||||||| || ||| |||| Sbjct: 551 ttcctgtacatcgccgggtggatcgggtgggtgggtcggagctaccttattgccatcagg 610 Query: 130 ggcgagaagaagcccgccatgagggagatcatcatcgacgt 170 | ||||| || || | |||| |||||||||||||||||| Sbjct: 611 gatgagaaaaaaccgacgatgaaggagatcatcatcgacgt 651
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 49 ttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgggt 101 ||||||| |||| || |||| ||||||||||||||||||||||| |||||||| Sbjct: 346784 ttcatcatccccagcttgctgttcctctacatcgccggctggattggctgggt 346836
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 49 ttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgggt 101 ||||||| |||| || |||| ||||||||||||||||||||||| |||||||| Sbjct: 1274020 ttcatcatccccagcttgctgttcctctacatcgccggctggattggctgggt 1273968
>emb|BX814457.1|CNS0ADUS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 411 Score = 63.9 bits (32), Expect = 4e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 73 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 132 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| |||| || | || || |||||||| ||||| Sbjct: 133 tggatcgggtgggttggaagaagctacttcatagctattagtggtgagaagaaacccgcg 192 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 193 atgaaagagatcatcatcga 212
>ref|NM_102871.3| Arabidopsis thaliana unknown protein AT1G31330 mRNA, complete cds Length = 925 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 499 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 558 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 559 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 618 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 619 atgaaagagatcatcatcga 638
>gb|BT000680.1| Arabidopsis thaliana clone RAFL05-09-F03 (R10152) putative photosystem I reaction centre subunit III precursor (At1g31330) mRNA, complete cds Length = 859 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY051021.1| Arabidopsis thaliana putative photosystem I subunit III precursor (At1g31330) mRNA, complete cds Length = 697 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>gb|AF360251.1| Arabidopsis thaliana putative photosystem I subunit III precursor (At1g31330) mRNA, complete cds Length = 821 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY094015.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>gb|AY062712.1| Arabidopsis thaliana similar to photosystem I reaction centre subunit III precursor (At1g31330; T19E23.12) mRNA, complete cds Length = 805 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AF424564.1|AF424564 Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 859 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY052281.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 1737 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 1352 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 1411 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 1412 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 1471 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 1472 atgaaagagatcatcatcga 1491
>gb|AY048220.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 820 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 488 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 547 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 548 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 607 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 608 atgaaagagatcatcatcga 627
>emb|BX818241.1|CNS0AEDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 438 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 497 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 498 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 557 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 558 atgaaagagatcatcatcga 577
>emb|BX814304.1|CNS0AEI0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 811 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 459 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 518 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 519 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 578 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 579 atgaaagagatcatcatcga 598
>emb|BX815295.1|CNS0ACV1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 480 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 539 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 540 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 599 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 600 atgaaagagatcatcatcga 619
>emb|BX814897.1|CNS0ACW2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 488 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 547 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 548 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 607 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 608 atgaaagagatcatcatcga 627
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 55742 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 55683 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 55682 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 55623 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 55622 atgaaagagatcatcatcga 55603
>gb|BT002099.1| Arabidopsis thaliana similar to photosystem I reaction centre subunit III precursor (At1g31330) mRNA, complete cds Length = 699 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>emb|X63765.1|SSPPSAFJ9 Synechococcus sp. genes psaF, psaJ and rp19 for photosystem I subunit III, subunit X and ribosomal protein RL9 Length = 1592 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 64 gtgctcttcctctacatcgccggctggatcggctgggt 101 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 475 gtgctcttcctgtacatcgctggctggattggctgggt 512
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 43 ggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctggg 100 |||||||| ||| ||| ||| |||| ||||||||||||||||||||| | ||||||| Sbjct: 300358 ggcgagtttctcatccctggcctgcttttcctctacatcgccggctggctgggctggg 300301
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 64 gtgctcttcctctacatcgccggctggatcggctgggt 101 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 2524247 gtgctcttcctgtacatcgctggctggattggctgggt 2524284
>emb|AJ245629.1|ATH245629 Arabidopsis thaliana mRNA for photosystem I subunit III precursor (psaF gene) Length = 865 Score = 48.1 bits (24), Expect = 0.025 Identities = 111/140 (79%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 495 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 554 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 ||||| || ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 555 tggattgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 614 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 615 atgaaagagatcatcatcga 634
>gb|AY088009.1| Arabidopsis thaliana clone 40329 mRNA, complete sequence Length = 803 Score = 48.1 bits (24), Expect = 0.025 Identities = 111/140 (79%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 88 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 147 ||||| || ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggattgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 148 atgagggagatcatcatcga 167 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 46.1 bits (23), Expect = 0.100 Identities = 50/59 (84%) Strand = Plus / Plus Query: 42 gggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctggg 100 ||||||||| ||| ||||||| |||| || |||||||||||||| ||| | ||||||| Sbjct: 2927198 gggcgagtttctcatccccggcttgctttttctctacatcgccggttggctgggctggg 2927256
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 67 ctcttcctctacatcgccggctggatcggctgggt 101 |||||||||||||| ||||| |||||||| ||||| Sbjct: 111398 ctcttcctctacattgccggttggatcggttgggt 111364
>ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-like protein (OSJNBb0015I11.17), mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 239 acggcgacctcgtcgtcgacgacgccgacatcgg 272 |||||| ||| ||||||| ||||||||||||||| Sbjct: 353 acggcggccttgtcgtcgccgacgccgacatcgg 386
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 240 cggcgacctcgtcgtcgacgacgccgacatcggc 273 |||||| ||||||||||||| ||| ||||||||| Sbjct: 38065 cggcgagctcgtcgtcgacggcgcggacatcggc 38032
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 240 cggcgacctcgtcgtcgacgacgccgacatcggc 273 |||||| ||||||||||||| ||| ||||||||| Sbjct: 127557 cggcgagctcgtcgtcgacggcgcggacatcggc 127590
>gb|BT023413.1| Arabidopsis thaliana At2g47890 gene, complete cds Length = 1470 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Minus Query: 28 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 87 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 1335 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 1276 Query: 88 tggatcggctgggt 101 |||||||| ||||| Sbjct: 1275 tggatcgggtgggt 1262
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cctcgtcgtcgacgacgccgac 267 |||||||||||||||||||||| Sbjct: 1139213 cctcgtcgtcgacgacgccgac 1139192
>dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F10, full insert sequence Length = 1488 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 239 acggcgacctcgtcgtcgacgacgccgacatcgg 272 |||||| ||| ||||||| ||||||||||||||| Sbjct: 29 acggcggccttgtcgtcgccgacgccgacatcgg 62
>gb|M83119.1|FTRPHOTOI Flaveria trinervia photosystem I subunit III (psaF) gene, complete cds Length = 824 Score = 44.1 bits (22), Expect = 0.39 Identities = 55/66 (83%) Strand = Plus / Plus Query: 40 tggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgg 99 |||||||| || ||||||||||| | || || || |||||||| || |||||||| ||| Sbjct: 477 tggggcgaatttatcacccccgggattctatttctgtacatcgctggatggatcgggtgg 536 Query: 100 gtcgga 105 |||||| Sbjct: 537 gtcgga 542
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcacccccggcgtgctcttcc 73 ||||||||||||||||||||| Sbjct: 3154508 tcacccccggcgtgctcttcc 3154528
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 acctcgtcgtcgacgacgccg 265 ||||||||||||||||||||| Sbjct: 1949429 acctcgtcgtcgacgacgccg 1949449
>gb|BT013202.1| Lycopersicon esculentum clone 134366R, mRNA sequence Length = 824 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 28 gaccagcggcactggggcgagttcatcac 56 |||||| |||||||||| ||||||||||| Sbjct: 473 gaccagaggcactggggtgagttcatcac 501
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcacccccggcgtgctcttcc 73 ||||||||||||||||||||| Sbjct: 299314 tcacccccggcgtgctcttcc 299334
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcacccccggcgtgctcttcc 73 ||||||||||||||||||||| Sbjct: 41261 tcacccccggcgtgctcttcc 41281
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 239 acggcgacctcgtcgtcgacgacgccgacatcg 271 |||||| ||| ||||||| |||||||||||||| Sbjct: 107045 acggcggccttgtcgtcgccgacgccgacatcg 107077
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 cgtcgtcgacgacgccgacatcggc 273 |||||||||||||| |||||||||| Sbjct: 18403072 cgtcgtcgacgacgacgacatcggc 18403096 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cctcgtcgtcgacgacgccg 265 |||||||||||||||||||| Sbjct: 12249167 cctcgtcgtcgacgacgccg 12249186
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 239 acggcgacctcgtcgtcgacgacgccgacatcg 271 |||||| ||| ||||||| |||||||||||||| Sbjct: 20705593 acggcggccttgtcgtcgccgacgccgacatcg 20705625 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgtcgacgacgccga 266 |||||||||||||||||||| Sbjct: 21068367 ctcgtcgtcgacgacgccga 21068348
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 catcaacggcgacctcgtcgtcgac 258 |||| |||||||||||||||||||| Sbjct: 1766734 catcgacggcgacctcgtcgtcgac 1766710
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 239 acggcgacctcgtcgtcgacgacgccgacatcg 271 |||||| ||| ||||||| |||||||||||||| Sbjct: 20716865 acggcggccttgtcgtcgccgacgccgacatcg 20716897 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgtcgacgacgccga 266 |||||||||||||||||||| Sbjct: 21079631 ctcgtcgtcgacgacgccga 21079612
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 cgtcgtcgacgacgccgacatcggc 273 |||||||||||||| |||||||||| Sbjct: 104995 cgtcgtcgacgacgacgacatcggc 105019
>ref|XM_471550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cctcgtcgtcgacgacgccg 265 |||||||||||||||||||| Sbjct: 195 cctcgtcgtcgacgacgccg 214
>ref|NM_197655.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015J15.29), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctcgtcgtcgacgacgccga 266 |||||||||||||||||||| Sbjct: 66 ctcgtcgtcgacgacgccga 85
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aacctctcttgtatttaaga 423 |||||||||||||||||||| Sbjct: 82673 aacctctcttgtatttaaga 82654
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ccgtcagcggcgagaagaag 141 |||||||||||||||||||| Sbjct: 3593454 ccgtcagcggcgagaagaag 3593435
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tcatcgccgtcagcggcgag 135 |||||||||||||||||||| Sbjct: 1323871 tcatcgccgtcagcggcgag 1323852
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cgccggctggatcggctgggtcgg 104 ||||||||||||||||||| |||| Sbjct: 5065988 cgccggctggatcggctggttcgg 5065965
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgtcgtcgacgacgccgaca 268 |||||||||||||||||||| Sbjct: 1625227 cgtcgtcgacgacgccgaca 1625246
>emb|AL445928.8| Human DNA sequence from clone RP11-305E17 on chromosome 1, complete sequence Length = 173580 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 374 gtaggagctgataggatcatggagaaat 401 ||||||| |||| ||||||||||||||| Sbjct: 156348 gtaggaggtgattggatcatggagaaat 156375
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcgccgtcagcggcgagaaga 139 ||||| |||||||||||||||||| Sbjct: 190147 tcatcaccgtcagcggcgagaaga 190124
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcgccgtcagcggcgagaaga 139 ||||| |||||||||||||||||| Sbjct: 103983 tcatcaccgtcagcggcgagaaga 103960
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcgccgtcagcggcgagaaga 139 ||||| |||||||||||||||||| Sbjct: 179712 tcatcaccgtcagcggcgagaaga 179689
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cctcgtcgtcgacgacgccg 265 |||||||||||||||||||| Sbjct: 228112 cctcgtcgtcgacgacgccg 228093
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cctcgtcgtcgacgacgccg 265 |||||||||||||||||||| Sbjct: 74048 cctcgtcgtcgacgacgccg 74067
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 cggcgacctcgtcgtcgacgacgccgac 267 ||||||| ||||||||||||||| |||| Sbjct: 102034 cggcgacgtcgtcgtcgacgacgacgac 102007
>gb|AC087698.5| Homo sapiens chromosome 8, clone RP11-25K19, complete sequence Length = 150750 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 agaaactgaacccaatcttg 440 |||||||||||||||||||| Sbjct: 10998 agaaactgaacccaatcttg 10979
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence Length = 167258 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgtatttaagaaactgaacc 432 |||||||||||||||||||| Sbjct: 17456 tgtatttaagaaactgaacc 17437
>gb|AE012083.1| Xanthomonas axonopodis pv. citri str. 306, section 461 of 469 of the complete genome Length = 10370 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cgccggctggatcggctgggtcgg 104 ||||||||||||||||||| |||| Sbjct: 1228 cgccggctggatcggctggttcgg 1205
>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gcgaccagcggcactggggc 45 |||||||||||||||||||| Sbjct: 154042 gcgaccagcggcactggggc 154061
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctcgtcgtcgacgacgccga 266 |||||||||||||||||||| Sbjct: 137339 ctcgtcgtcgacgacgccga 137358
>gb|AC090152.4| Homo sapiens chromosome 8, clone RP11-554M1, complete sequence Length = 118755 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 agaaactgaacccaatcttg 440 |||||||||||||||||||| Sbjct: 14504 agaaactgaacccaatcttg 14523
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gcgaccagcggcactggggc 45 |||||||||||||||||||| Sbjct: 32926 gcgaccagcggcactggggc 32945
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cgacgtcgagctcgccgcca 184 |||||||||||||||||||| Sbjct: 1823612 cgacgtcgagctcgccgcca 1823593
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgtcgtcgacgacgccgac 267 |||||||||||||||||||| Sbjct: 3776422 tcgtcgtcgacgacgccgac 3776403
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tcgccggctggatcggctgg 99 |||||||||||||||||||| Sbjct: 655777 tcgccggctggatcggctgg 655758
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 cggcgacctcgtcgtcgacgacgccgac 267 ||||||| ||||||||||||||| |||| Sbjct: 4734029 cggcgacgtcgtcgtcgacgacgacgac 4734002
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cgccggctggatcggctggg 100 |||||||||||||||||||| Sbjct: 3034827 cgccggctggatcggctggg 3034808
>emb|AL513406.1|CNS07EFT Human DNA sequence chromosome 8 of Homo sapiens (human) Length = 204955 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 agaaactgaacccaatcttg 440 |||||||||||||||||||| Sbjct: 141225 agaaactgaacccaatcttg 141244
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agctcatcaacggcgacctcgtcg 253 |||||||||||| ||||||||||| Sbjct: 1147974 agctcatcaacgacgacctcgtcg 1147951
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 atggagaaatggaacctctc 411 |||||||||||||||||||| Sbjct: 418713 atggagaaatggaacctctc 418732
>dbj|AB209672.1| Homo sapiens mRNA for Transducin-like enhancer of split 3 splice variant 1 variant protein Length = 7809 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gcgaccagcggcactggggc 45 |||||||||||||||||||| Sbjct: 1760 gcgaccagcggcactggggc 1741
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 cggcgacctcgtcgtcgacgacgccgac 267 ||||||| ||||||||||||||| |||| Sbjct: 6437 cggcgacgtcgtcgtcgacgacgacgac 6410 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,962,456 Number of Sequences: 3902068 Number of extensions: 2962456 Number of successful extensions: 64608 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 62651 Number of HSP's gapped (non-prelim): 1940 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
