ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4j19 |
|---|---|
| Clone Library Name | barley_pub |
>RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ| Length = 269 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/68 (38%), Positives = 37/68 (54%) Frame = +2 Query: 32 PDIALSVAQTIFQSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMP 211 P IA A+ F SD R L V+VP I+Q D+ P V +Y+H+HL S+ + M Sbjct: 185 PVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQ-ME 243 Query: 212 SEGHLPQL 235 + GH P + Sbjct: 244 ARGHCPHM 251
>BIOH_NEIG1 (Q5F641) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 258 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = +2 Query: 68 QSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGHLPQL 235 ++D R LL + VP +V KD P+ + EYLH+HL +V VM H P L Sbjct: 185 RADARHLLDKIDVPVLLVFGGKDAITPLRMGEYLHRHLKGSRLV-VMEKAAHAPFL 239
>BIOH_NEIMB (Q9K197) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 258 Score = 36.2 bits (82), Expect = 0.023 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +2 Query: 68 QSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGHLPQL 235 ++D R LL + VP +V KD P + EYLH+ L +V VM H P L Sbjct: 185 RADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLV-VMEKAAHAPFL 239
>BIOH_NEIMA (Q9JSN0) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 312 Score = 36.2 bits (82), Expect = 0.023 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +2 Query: 68 QSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGHLPQL 235 ++D R LL + VP +V KD P + EYLH+ L +V VM H P L Sbjct: 185 RADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLV-VMEKAAHAPFL 239
>BPHL_HUMAN (Q86WA6) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase)| (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA) Length = 291 Score = 34.3 bits (77), Expect = 0.089 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +2 Query: 80 RTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGH 223 R LLP V P IV KD VP ++++HKH+ S + +MP H Sbjct: 226 RHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKH 272
>BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 252 Score = 31.6 bits (70), Expect = 0.57 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = +2 Query: 44 LSVAQTIFQSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGH 223 L + QT SD+R L VS P ++ D+ P ++++ +HL +V + P GH Sbjct: 180 LKILQT---SDLRAELNQVSQPVLLIHGRNDVITPAGAADWMQQHLPRARLV-LFPHCGH 235 Query: 224 LPQL 235 P L Sbjct: 236 APFL 239
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.0 bits (66), Expect = 1.7 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Frame = +1 Query: 10 PNSLQHSPRHSPERCTNDLPE---RCAHPPTTRLGPMPYRSEHQGPSSASCG 156 P L+H PRH + LP R + PPT + P +R+ PS+ G Sbjct: 841 PPLLKHGPRHRSLNLPSRLPRTWRRLSEPPTRAVKPWVHRAYPPPPSAGPWG 892
>CP51_MYCTU (P0A512) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) Length = 451 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = -2 Query: 223 MAFGGHHLNDGIATKMLVQVL*HHNWHC*VLGALNDMAWD 104 M F GHH + G A+ L++++ H + + V+ L+++ D Sbjct: 253 MMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD 292
>CP51_MYCBO (P0A513) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) Length = 451 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = -2 Query: 223 MAFGGHHLNDGIATKMLVQVL*HHNWHC*VLGALNDMAWD 104 M F GHH + G A+ L++++ H + + V+ L+++ D Sbjct: 253 MMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD 292
>FBLN2_HUMAN (P98095) Fibulin-2 precursor| Length = 1184 Score = 29.3 bits (64), Expect = 2.8 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 10 PNSLQHSPRHSPERCTNDLPERC 78 PNS+ PR SPE T DL E C Sbjct: 423 PNSVHSIPRSSPEGSTKDLIETC 445
>GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activating protein)| Length = 1163 Score = 28.9 bits (63), Expect = 3.7 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +1 Query: 4 VQPNSLQHSPRHSPERCTNDLPERCAHPPTTRL 102 +QP S+ HS R N P CA PP TRL Sbjct: 421 LQPRSMTHS-----SRSLNATPRSCATPPGTRL 448
>CP51_MYCVN (Q5IZM4) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) Length = 452 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = -2 Query: 223 MAFGGHHLNDGIATKMLVQVL*HHNWHC*VLGALNDMAWDRDE 95 + F GHH + G ++ L+++L H ++ V L+D+ D E Sbjct: 254 LMFAGHHTSSGTSSWTLIELLRHPEFYAKVQQELDDLYADGQE 296
>UBR1_KLULA (O60014) Ubiquitin-protein ligase E3 component N-recognin-1 (EC| 6.-.-.-) (N-end-recognizing protein) Length = 1945 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 131 KDLAVPVVVSEYLHKHLGSDSIVEVMP 211 +DL +P + S +HK + +D +VE+ P Sbjct: 494 QDLIIPTLASSAVHKPMFTDQLVEIFP 520
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 28.1 bits (61), Expect = 6.3 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 28 SPRHSPERCTNDLPERCAHPPTTRLGPMPYRSEHQGPS 141 SP H P T PP T LG +P ++ + PS Sbjct: 320 SPTHYPASATYSFTADFRAPPPTALGALPSLADKESPS 357
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 27.7 bits (60), Expect = 8.3 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +1 Query: 13 NSLQHSPRHSPERCTNDLPERCAHPPTTRLGPMPYRSEHQGPSSA 147 NS HSP S + LP PP+TRL P + +QG SA Sbjct: 108 NSQPHSPTSSLTAGASSLP-LLQSPPSTRLPPGQHLVPNQGDHSA 151
>APTX_DROME (Q8MSG8) Protein aprataxin-like| Length = 662 Score = 27.7 bits (60), Expect = 8.3 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Frame = +1 Query: 1 GVQPNSLQHSPRHSPERCTNDLPERCAHPPTTRLGPMPYRSEHQGPSSASCGVRVLAQAS 180 G N + + ++P R T L + PP R GP +GP + G R Sbjct: 486 GPSVNMMNQNNPNNPFRNTPHLNRQSQKPPHPRSGP-------RGPMAPWTGPRFPCHQQ 538 Query: 181 W*RFHR*G-DALRRPSPP 231 RF G +A R+P PP Sbjct: 539 QNRFRPPGFNACRQPYPP 556
>PIP_PLEBO (O83041) Probable proline iminopeptidase (EC 3.4.11.5) (PIP)| (Prolyl aminopeptidase) (PAP) Length = 321 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 95 LVSVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGH 223 + +P IVQ D+ P+ + LHK L ++ V+P GH Sbjct: 253 IAHIPTVIVQGRYDVVCPMTSAWALHKALPESELI-VVPDAGH 294
>ELH2_ACIAD (P00632) 3-oxoadipate enol-lactonase 2 (EC 3.1.1.24) (3-oxoadipate| enol-lactonase II) (Enol-lactone hydrolase II) (Beta-ketoadipate enol-lactone hydrolase II) Length = 266 Score = 27.7 bits (60), Expect = 8.3 Identities = 11/45 (24%), Positives = 24/45 (53%) Frame = +2 Query: 47 SVAQTIFQSDVRTLLPLVSVPCHIVQSTKDLAVPVVVSEYLHKHL 181 S + + ++DVR L +S+P ++ +D V ++L +H+ Sbjct: 188 SCCEALAEADVRPQLQRISIPVLVIAGAQDPVTTVADGQFLCEHI 232
>Y2734_MYCBO (P0A573) Hypothetical protein Mb2734| Length = 341 Score = 27.7 bits (60), Expect = 8.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 101 SVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGHLP 229 ++P I+ TKD+ +PV + H + S +E+ GH P Sbjct: 236 AIPVQIIWGTKDVVLPVRHAHMAHAAM-PGSQLEIFEGSGHFP 277
>Y2715_MYCTU (P0A572) Hypothetical protein Rv2715/MT2788| Length = 341 Score = 27.7 bits (60), Expect = 8.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 101 SVPCHIVQSTKDLAVPVVVSEYLHKHLGSDSIVEVMPSEGHLP 229 ++P I+ TKD+ +PV + H + S +E+ GH P Sbjct: 236 AIPVQIIWGTKDVVLPVRHAHMAHAAM-PGSQLEIFEGSGHFP 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,985,569 Number of Sequences: 219361 Number of extensions: 771442 Number of successful extensions: 2500 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2500 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
