ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal4j19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468840.1| Oryza sativa (japonica cultivar-group), mRNA 165 8e-38
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 8e-38
3gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 165 8e-38
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 8e-38
5dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
6dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
7dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
8dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
9gb|AY111531.1| Zea mays CL29427_-2 mRNA sequence 143 3e-31
10gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.049
11gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.049
12dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.049
13emb|AL096772.5|HSJ365O12 Human DNA sequence from clone RP3-365O1... 42 0.77
14dbj|AB065679.1| Homo sapiens gene for seven transmembrane helix ... 42 0.77
15gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosom... 40 3.0
16gb|BC006631.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 3.0
17gb|BC049791.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 3.0
18gb|BC004667.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 3.0
19ref|NM_133947.2| Mus musculus nuclear mitotic apparatus protein ... 40 3.0
20gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, comp... 40 3.0
21ref|XM_818290.1| Trypanosoma brucei TREU927 pumilio RNA-binding ... 40 3.0
22emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, co... 40 3.0
23gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete... 40 3.0
24emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 o... 40 3.0
25dbj|AB212761.1| Nephila clavata spKv1.1 mRNA for potassium chann... 40 3.0
26dbj|AK144141.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 3.0
27gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, comple... 40 3.0 
>ref|XM_468840.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 942

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
           |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 645 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 704

                                                                       
Query: 61  gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
            ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 705 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 764

                                                                       
Query: 121 tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
           |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 765 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 824

                                                              
Query: 181 tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
            ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 825 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 875
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
                |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 18263634 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 18263575

                                                                            
Query: 61       gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
                 ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 18263574 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 18263515

                                                                            
Query: 121      tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
                |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 18263514 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 18263455

                                                                   
Query: 181      tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
                 ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 18263454 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 18263404



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 1       ggagttcagccgaactctcttcaacattcgcccagacat 39
               |||||||||||| || ||||||||||| ||||| |||||
Sbjct: 5391446 ggagttcagccgcaccctcttcaacatgcgcccggacat 5391484
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>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete
             sequence
          Length = 159579

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Minus

                                                                         
Query: 1     ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
             |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 30065 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 30006

                                                                         
Query: 61    gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
              ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 30005 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 29946

                                                                         
Query: 121   tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
             |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 29945 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 29886

                                                                
Query: 181   tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
              ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 29885 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 29835
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
                |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 18257175 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 18257116

                                                                            
Query: 61       gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
                 ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 18257115 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 18257056

                                                                            
Query: 121      tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
                |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 18257055 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 18256996

                                                                   
Query: 181      tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
                 ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 18256995 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 18256945



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 1       ggagttcagccgaactctcttcaacattcgcccagacat 39
               |||||||||||| || ||||||||||| ||||| |||||
Sbjct: 5390661 ggagttcagccgcaccctcttcaacatgcgcccggacat 5390699
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>dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E03, full
           insert sequence
          Length = 1175

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
           |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 667 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 726

                                                                       
Query: 61  gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
            ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 727 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 786

                                                                       
Query: 121 tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
           |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 787 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 846

                                                              
Query: 181 tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
            ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 847 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 897
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>dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H10, full
           insert sequence
          Length = 1172

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
           |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 664 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 723

                                                                       
Query: 61  gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
            ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 724 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 783

                                                                       
Query: 121 tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
           |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 784 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 843

                                                              
Query: 181 tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
            ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 844 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 894
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>dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G08, full
           insert sequence
          Length = 1070

 Score =  165 bits (83), Expect = 8e-38
 Identities = 194/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
           |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 567 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 626

                                                                       
Query: 61  gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
            ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 627 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 686

                                                                       
Query: 121 tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
           |||||||||||| || || || ||||| ||||||||||| |||||| |||||||||| ||
Sbjct: 687 tcagagcaccaaagatcttgctgtgccggttgtggtgtctgagtacctgcacaagcacct 746

                                                              
Query: 181 tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
            ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 747 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 797
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>dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A08, full
           insert sequence
          Length = 1245

 Score =  157 bits (79), Expect = 2e-35
 Identities = 193/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacatagccctgagcgttgcacaaac 60
           |||||| ||||| || ||||||||||| || ||||||||||||||||| || || || ||
Sbjct: 666 ggagtttagccgcacactcttcaacatacgtccagacatagccctgagtgtcgcccagac 725

                                                                       
Query: 61  gatcttccagagcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgt 120
            ||||||||||| |||||||| | |||||||||||| ||| | || |||||||| || ||
Sbjct: 726 aatcttccagagtgatgtgcgaagcctcctaccacttgtcaccgtaccatgccacattgt 785

                                                                       
Query: 121 tcagagcaccaaggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatct 180
           |||||||||||| || || || ||| | ||||||||||| |||||| |||||||||| ||
Sbjct: 786 tcagagcaccaaagatcttgctgtggcggttgtggtgtctgagtacctgcacaagcacct 845

                                                              
Query: 181 tggtagcgattccatcgttgaggtgatgccctccgaaggccatctccccca 231
            ||| |||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 846 cggtggcgactcaatcgtcgaggtaatgccgtctgagggccatctacccca 896
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>gb|AY111531.1| Zea mays CL29427_-2 mRNA sequence
          Length = 471

 Score =  143 bits (72), Expect = 3e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                       
Query: 72  gcgatgtgcgcaccctcctaccactcgtctcggtcccatgccatatcgttcagagcacca 131
           |||||||||||| |||||| || | |||    ||||||||||| || |||||||||||||
Sbjct: 467 gcgatgtgcgcagcctcctcccgcacgttagtgtcccatgccacattgttcagagcacca 408

                                                                       
Query: 132 aggacctagcagtgccagttgtggtgtcagagtacttgcacaagcatcttggtagcgatt 191
           |||| || || ||||||||||||||||| |||||| |||||| ||| |||||| |||| |
Sbjct: 407 aggatctcgcggtgccagttgtggtgtctgagtacctgcacaggcaccttggtggcgact 348

                                                       
Query: 192 ccatcgttgaggtgatgccctccgaaggccatctcccccagctt 235
           ||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct: 347 ccatcgtggaggtgatgccgtctgaaggccatcttccccagctt 304
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>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 1     ggagttcagccgaactctcttcaacattcgcccagacat 39
             |||||||||||| || ||||||||||| ||||| |||||
Sbjct: 97614 ggagttcagccgcaccctcttcaacatgcgcccggacat 97652
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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 1      ggagttcagccgaactctcttcaacattcgcccagacat 39
              |||||||||||| || ||||||||||| ||||| |||||
Sbjct: 121337 ggagttcagccgcaccctcttcaacatgcgcccggacat 121375
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>dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N24, full
           insert sequence
          Length = 1487

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 1   ggagttcagccgaactctcttcaacattcgcccagacat 39
           |||||||||||| || ||||||||||| ||||| |||||
Sbjct: 871 ggagttcagccgcaccctcttcaacatgcgcccggacat 909
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>emb|AL096772.5|HSJ365O12 Human DNA sequence from clone RP3-365O12 on chromosome 6p11.2-12.3
             Contains the gene for a novel protein similar to KIAA0758
             and two novel genes, complete sequence
          Length = 117636

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    cccagacatagccctgagcgttgca 55
             ||||||||||||||||||| |||||
Sbjct: 12286 cccagacatagccctgagcattgca 12262
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>dbj|AB065679.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_242
          Length = 109156

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    cccagacatagccctgagcgttgca 55
             ||||||||||||||||||| |||||
Sbjct: 62142 cccagacatagccctgagcattgca 62118
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>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence
          Length = 218177

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tagcagtgccagttgtggtg 157
             ||||||||||||||||||||
Sbjct: 11298 tagcagtgccagttgtggtg 11317
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>gb|BC006631.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
            IMAGE:3481703), complete cds
          Length = 2940

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tagcagtgccagttgtggtg 157
            ||||||||||||||||||||
Sbjct: 2170 tagcagtgccagttgtggtg 2151
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>gb|BC049791.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
            MGC:59410 IMAGE:6505037), complete cds
          Length = 7214

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tagcagtgccagttgtggtg 157
            ||||||||||||||||||||
Sbjct: 6397 tagcagtgccagttgtggtg 6378
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>gb|BC004667.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
           IMAGE:3498604), partial cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 tagcagtgccagttgtggtg 157
           ||||||||||||||||||||
Sbjct: 666 tagcagtgccagttgtggtg 647
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>ref|NM_133947.2| Mus musculus nuclear mitotic apparatus protein 1 (Numa1), mRNA
          Length = 7214

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tagcagtgccagttgtggtg 157
            ||||||||||||||||||||
Sbjct: 6397 tagcagtgccagttgtggtg 6378
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>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   tagcagtgccagttgtggtg 157
             ||||||||||||||||||||
Sbjct: 55019 tagcagtgccagttgtggtg 55000
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>ref|XM_818290.1| Trypanosoma brucei TREU927 pumilio RNA-binding protein (Tb10.26.0140)
            partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 198  ttgaggtgatgccctccgaaggcc 221
            |||||||||||||| |||||||||
Sbjct: 1559 ttgaggtgatgccccccgaaggcc 1582
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>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence
          Length = 205764

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    ttgtggtgtcagagtacttg 169
              ||||||||||||||||||||
Sbjct: 153903 ttgtggtgtcagagtacttg 153922
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>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tagcagtgccagttgtggtg 157
              ||||||||||||||||||||
Sbjct: 177777 tagcagtgccagttgtggtg 177796
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>emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 on chromosome Xq21.1-21.33
             Contains a CpG island, complete sequence
          Length = 80730

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   ttgtggtgtcagagtacttg 169
             ||||||||||||||||||||
Sbjct: 74364 ttgtggtgtcagagtacttg 74383
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>dbj|AB212761.1| Nephila clavata spKv1.1 mRNA for potassium channel Kv1.1, complete
           cds
          Length = 2765

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 gaaggccatctcccccagct 234
           ||||||||||||||||||||
Sbjct: 672 gaaggccatctcccccagct 653
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>dbj|AK144141.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:G430036B18 product:Nuclear mitotic apparatus
            protein 1 (Fragment) homolog [Homo sapiens], full insert
            sequence
          Length = 2936

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tagcagtgccagttgtggtg 157
            ||||||||||||||||||||
Sbjct: 2184 tagcagtgccagttgtggtg 2165
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>gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, complete sequence
          Length = 224935

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tagcagtgccagttgtggtg 157
              ||||||||||||||||||||
Sbjct: 151597 tagcagtgccagttgtggtg 151578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,269,695
Number of Sequences: 3902068
Number of extensions: 1269695
Number of successful extensions: 17431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17381
Number of HSP's gapped (non-prelim): 50
length of query: 236
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 214
effective length of database: 17,147,199,772
effective search space: 3669500751208
effective search space used: 3669500751208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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