>VATI1_TREPA (O83444) V-type ATP synthase subunit I 1 (EC 3.6.3.14) (V-type|
           ATPase subunit I 1)
          Length = 622

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
 Frame = +2

Query: 161 AVFHQSFLLGGLAKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIAL 340
           A F    +LGG+  ++L  ++ +        +V    AG ++N I           R+++
Sbjct: 459 AEFGSLLMLGGMYVVVLNLIVDKERYPLTGMIVGSIIAGFVLNFI-------FVNYRVSV 511

Query: 341 AMWGRKVSSRLGSVTIALLGLSSLFSDVAFYWAVLIFFLQRGPIAPLSEEITEP--ENSY 514
               + V+  + +V  ALLG+ ++F+DV  Y  +    L  G I+    E+T P   N  
Sbjct: 512 R---QSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMTHPLFANFL 568

Query: 515 IGLGVAILFLG 547
             LG+ +L  G
Sbjct: 569 AFLGIVLLLFG 579

>FHUB_SALTY (O87656) Ferrichrome transport system permease protein fhuB|
           (Ferrichrome uptake protein fhuB)
          Length = 685

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +2

Query: 137 GLGIIVDPAVFHQSFLLGGLAK-LILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAG 313
           GLG++    V  Q  L   LA+   LG  +  G QL I    LWA  G L     ++   
Sbjct: 96  GLGLV---GVLFQQVLRNPLAEPTTLG--VATGAQLGITVTTLWAIPGALTTQFAALTGA 150

Query: 314 ELDGGRIALAMWGRKVSSRLGSVTIALLGL 403
            + G  +    WG+    RL  VT+ L GL
Sbjct: 151 CIVGALVFGVAWGK----RLSPVTLILAGL 176

>MFAP1_MOUSE (Q9CQU1) Microfibrillar-associated protein 1|
          Length = 439

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -3

Query: 496 RYLLGEGSDRAPLQ---EEDEHRPVKRNIAEERREPEQRDSDAT 374
           RY+ G+  D AP++   EEDE     +   E+  EPE+++ D++
Sbjct: 38  RYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSS 81

>MFAP1_HUMAN (P55081) Microfibrillar-associated protein 1|
          Length = 439

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -3

Query: 496 RYLLGEGSDRAPLQ---EEDEHRPVKRNIAEERREPEQRDSDAT 374
           RY+ G+  D AP++   EEDE     +   E+  EPE+++ D++
Sbjct: 38  RYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSS 81

>SPY2_MOUSE (Q9QXV8) Sprouty homolog 2 (Spry-2)|
          Length = 315

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
 Frame = -1

Query: 165 TAGSTMIPRPSLGGNMKPSSRRTNP--------RENPATGPAAATLSRSPRLRTILTI 16
           T G T++PRP L    +PS++  +         R+ P   P+    SR+P  R+I T+
Sbjct: 56  TEGPTVVPRPGLKPAPRPSTQHKHERLHGLPEHRQPPRLQPSQVHSSRAPLSRSISTV 113

>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Hyperpolarization-activated
            cation channel 4) (HAC-4)
          Length = 1175

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = -1

Query: 279  RPAQAHNTSGFMDSCVPSFRTSPRISFARPPRRND**NTAGSTMIPRPSLGGNMKPSSRR 100
            R A  H++SG   + +P F  +P     RPP          +  +PR +  G++ P    
Sbjct: 1086 RRASPHSSSGESVAALPPFPRAP----GRPPGAGP--GQHVTLTLPRKASSGSLPPPLSL 1139

Query: 99   TNPRENPATGP 67
              PR  PA GP
Sbjct: 1140 FGPRAAPAGGP 1150

>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7|
          Length = 695

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = -1

Query: 285 IRRPAQAHNTSGFMDSCVPSFRTSPRISFARP-PRRND**NTAGSTMIPRPSLGGNMKPS 109
           I +P  ++ T        P    + +++ A P P +N   N A ST  P PS+     P+
Sbjct: 333 IIQPPSSYGTGSSAGKTNPPVNPTIKVTAAIPSPLQNT--NPAPSTF-PNPSVASPAFPN 389

Query: 108 SRRTNPRENPAT-GPAAATLSRS 43
           S  +NP   PA+  P A+TL  S
Sbjct: 390 SSTSNPSTAPASASPLASTLKPS 412

>Y1582_MYCLE (Q9CBU4) Hypothetical zinc metalloprotease ML1582 (EC 3.4.24.-)|
          Length = 404

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2

Query: 197 AKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGR 355
           A +I GD +  G  ++       A   L++ AIN +P    DGG IA+A++ R
Sbjct: 301 ASIIGGDTVDHGLWVAF--WFFLAQLNLILGAINLVPLLPFDGGHIAIAVFER 351

>EMRY_ECOLI (P52600) Multidrug resistance protein Y|
          Length = 512

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
 Frame = +2

Query: 332 IALAMWGRKVSSRLGSVTIALL-----GLSSLFSDVAFYWAVLIFF-----LQRGPIAPL 481
           IA+ + GR ++ R+G + + LL      LSSL   ++    VLIFF     L  GP+ PL
Sbjct: 68  IAIPVTGR-LAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPL 126

Query: 482 SEEI 493
           S+ +
Sbjct: 127 SQSL 130

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 165  TAGSTMIPRPSLGGNMKPSSRRTNPRENPATGPAAATLSRSPRLRTILTIL 13
            + GST  P  S  G   P    T+P   P    + AT S SPR  T L +L
Sbjct: 4204 STGSTATPS-STPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVL 4253

>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1186

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 469 RAPLQEEDEHRPVKRNIAEERREPEQRDSD 380
           RA  ++ED +RP +R+ + +RR    RD D
Sbjct: 71  RADYRDEDTYRPSRRDRSRDRRRSRDRDDD 100

>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
            light chain LC1]
          Length = 2468

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
 Frame = -3

Query: 541  EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIA---EERREPEQRDSDATK 371
            E++  AEAD  +   R  +  G DRA   EED    +++  A   EE  + E +  DA +
Sbjct: 975  EESAKAEADAYIREKRESVASGDDRA---EEDMDEAIEKGEAEQSEEEADEEDKAEDARE 1031

Query: 370  PR*YLSSPHGERYAAAVKLSCGDAIDGIDQE----TSPSPQ 260
                      E Y  AV     +A  G +++    T+P+ Q
Sbjct: 1032 EEYEPEKMEAEDYVMAVVDKAAEA-GGAEEQYGFLTTPTKQ 1071

>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a)
          Length = 1382

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = -3

Query: 484  GEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKPR*YLSSPHGER 335
            GEG D       DE RP +R   +E REP  R  D   PR  +    G R
Sbjct: 921  GEGRDEDRSHRRDEERP-RRLGDDEDREPSLRPDDDRVPRRGMDDDRGPR 969

>Y9488_RHOBA (Q7ULI3) Hypothetical UPF0324 membrane protein RB9488|
          Length = 543

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/82 (26%), Positives = 42/82 (51%)
 Frame = +2

Query: 233 TQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGRKVSSRLGSVTIALLGLSSL 412
           T + I+P++  AW G  I++  ++ A     G  AL     +V++ +  +   L+G+++ 
Sbjct: 359 TAMGIDPILGGAWLGGTIDSTGAVAAAGAVLGDEAL-----EVAATVKMIQNILIGVTAF 413

Query: 413 FSDVAFYWAVLIFFLQRGPIAP 478
              VA YW   + F++R P  P
Sbjct: 414 C--VAIYW---VTFVERDPAGP 430

>Y392_METJA (Q57837) Hypothetical protein MJ0392 (EC 3.4.24.-)|
          Length = 339

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +2

Query: 182 LLGGLAKLILGDVLKEGTQ---LSINP---LVLWAWAGLLINAINSIPAGELDGGRIALA 343
           + G L   I+G VL   +Q   ++IN    L   +   L++   N IPA  +DGGRI  A
Sbjct: 96  IAGPLVSFIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRA 155

Query: 344 MWGRKVSSRLGSVTIALLGLS 406
           +  +K      +   A +G S
Sbjct: 156 ILSKKYGYLKSTKIAANIGKS 176

>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)|
            [Contains: MAP1 light chain LC1]
          Length = 2459

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 541  EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSD 380
            E+   AEADV +   R  +  G DRA   EED    +++  AE+  E  + + D
Sbjct: 967  EEIAKAEADVHIKEKRESVASGDDRA---EEDMDEALEKGEAEQSEEEGEEEED 1017

>Y344_CHLMU (Q9PKW7) Hypothetical zinc metalloprotease TC0344 (EC 3.4.24.-)|
          Length = 619

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +2

Query: 266 AWAGLL---INAINSIPAGELDGGRIALAMWGRKVSSRLGSVTIALLGLSSLFSDVAFYW 436
           +W GL+   +  +N +P   LDGG I L +W   VS R  ++ +   GL      V F  
Sbjct: 547 SWIGLISINLAVLNLLPIPVLDGGYILLCLW-ESVSRRRLNMRLIEKGL------VPFMI 599

Query: 437 AVLIFFL 457
            +++FF+
Sbjct: 600 LLILFFV 606

>Y2869_MYCTU (O33351) Hypothetical zinc metalloprotease Rv2869c/MT2937 (EC|
           3.4.24.-)
          Length = 404

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 197 AKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGR---KVSS 367
           A +I GD +  G  ++       A   L++ AIN +P    DGG IA+A++ R    V S
Sbjct: 301 ASIIGGDTVDHGLWVAF--WFFLAQLNLILAAINLLPLLPFDGGHIAVAVFERIRNMVRS 358

Query: 368 RLGSVTIA 391
             G V  A
Sbjct: 359 ARGKVAAA 366

>MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (MAP1.2)|
            (MAP1(X)) [Contains: MAP1 light chain LC1]
          Length = 2464

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/88 (27%), Positives = 37/88 (42%)
 Frame = -3

Query: 541  EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKPR* 362
            +++  AEADV +   R  +  G DRA    +D     +   +EE  E E +  DA +   
Sbjct: 972  DESAKAEADVHLKEKRESVVSGDDRAEEDMDDVLEKGEAEQSEEEGEEEDKAEDAREEGY 1031

Query: 361  YLSSPHGERYAAAVKLSCGDAIDGIDQE 278
                   E Y  AV     +A  G+ +E
Sbjct: 1032 EPDKTEAEDYVMAVADKAAEA--GVTEE 1057

>NU5M_MARPO (P26849) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 669

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 326 GRIALAMWGRKVSSR-LGSVTIALLGLSSLFSDVAFYWAVL 445
           G  A   +GR + SR +  VT   + LSS+FS +AFY   L
Sbjct: 12  GSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVAL 52

>Y2253_VIBCH (Q9KPV9) Hypothetical zinc metalloprotease VC2253 (EC 3.4.24.-)|
          Length = 452

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/102 (24%), Positives = 45/102 (44%)
 Frame = +2

Query: 191 GLAKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGRKVSSR 370
           G  K I   V  +GT+ SI+ + L  +  +L   ++ +PA +        ++W R     
Sbjct: 43  GFGKSIWKRVGHDGTEYSISMIPLGGYVKMLDGRVDDVPAEQQAMAFDKQSLWKRSAIVS 102

Query: 371 LGSVTIALLGLSSLFSDVAFYWAVLIFFLQRGPIAPLSEEIT 496
            G +       + LF+  A YW  L+F +    + P+  E+T
Sbjct: 103 AGPI------FNFLFAIFA-YW--LVFMIGVPAVKPVIGEVT 135

>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens|
           fiber cell beaded-filament structural protein CP 115)
           (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
          Length = 665

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 484 GEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKP 368
           G+  D+ P+ +E E    +    EE+RE E+RD ++ +P
Sbjct: 534 GQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRP 572

>CLMN_MOUSE (Q8C5W0) Calmin|
          Length = 1052

 Score = 26.6 bits (57), Expect(2) = 9.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 159 GSTMIPRPSLGGNMKPSSRRTNPRENPATGPAAATLSRSP 40
           GS+  P  +LG    PS     P+E    GP  +  S+ P
Sbjct: 820 GSSEGPTSALGPGSPPSHEDHQPKETKENGPVESQQSQEP 859



 Score = 20.8 bits (42), Expect(2) = 9.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 224 LEHLQG*ALQDHQEEMIDE 168
           LEH +   LQD +EE  DE
Sbjct: 768 LEHPEDSYLQDSREEEADE 786


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,365,888
Number of Sequences: 219361
Number of extensions: 1710705
Number of successful extensions: 5796
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5787
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)