>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  110 bits (275), Expect = 1e-24
 Identities = 52/55 (94%), Positives = 52/55 (94%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTRD R GVCKGIF TDNVSDESVVKIVDTFPGQSIDFFGALRARVYD
Sbjct: 290 MEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 344

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  105 bits (261), Expect = 4e-23
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTRD R GVCKGIF TDNV DE +VKIVD+FPGQSIDFFGALRARVYD
Sbjct: 290 MEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYD 344

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  103 bits (258), Expect = 1e-22
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TDNV +E+V+KIVDTFPGQSIDFFGALRARVYD
Sbjct: 304 MEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYD 358

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  103 bits (258), Expect = 1e-22
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TDNV DE+VV++VDTFPGQSIDFFGALRARVYD
Sbjct: 287 MEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYD 341

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  102 bits (255), Expect = 2e-22
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TDNV +E+VVKIVD+FPGQSIDFFGALRARVYD
Sbjct: 299 MEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYD 353

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  101 bits (252), Expect = 5e-22
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVY 164
           MEKFYWAPTR+ R GVCKGIF TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVY 353

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  100 bits (250), Expect = 8e-22
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TDNV +E +VK+VD FPGQSIDFFGALRARVYD
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYD 354

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  100 bits (249), Expect = 1e-21
 Identities = 45/55 (81%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTRD R GVCKGIF TD V +E + K+VDTFPGQSIDFFGALRARVYD
Sbjct: 302 MEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYD 356

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TD V +E VV++VDTFPGQSIDFFGALRARVYD
Sbjct: 296 MEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYD 350

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 46/55 (83%), Positives = 47/55 (85%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVC GIF TDNV  E VVKIVD FPGQSIDFFGALRARVYD
Sbjct: 304 MEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYD 358

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVC GIF +DNV+ E +VK+VDTFPGQSIDFFGALRARVYD
Sbjct: 300 MEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYD 354

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TD + DE +V +VD FPGQSIDFFGALRARVYD
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYD 354

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 94.7 bits (234), Expect = 6e-20
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           M+KFYWAPTR+ R G+C GIF TD V  E +VK+VDTFPGQSIDFFGALRARVYD
Sbjct: 297 MDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYD 351

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYWAPTR+ R GVCKGIF TD V ++ +V++VD  PGQSIDFFGALRARVYD
Sbjct: 304 MEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYD 358

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 43/54 (79%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVY 164
           MEKFYWAPTR+ R GVC GIF TD V  E VVK+VD FPGQSIDFFGALRARVY
Sbjct: 298 MEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVY 351

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 87.8 bits (216), Expect = 7e-18
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEK+YW PTR+ R GVC GIF  DNV    V  +VDTFPGQSIDFFGALRARVYD
Sbjct: 273 MEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYD 327

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 33/55 (60%), Positives = 40/55 (72%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYW P RD + G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD
Sbjct: 173 MEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYD 227

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 75.5 bits (184), Expect = 4e-14
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +3

Query: 3   MEKFYWAPTRDXRXGVCKGIFXTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 167
           MEKFYW P RD + G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD
Sbjct: 173 MEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYD 227

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 102 IVDTFPGQSIDFFGALR 152
           +VDTFPGQSIDFFGALR
Sbjct: 1   LVDTFPGQSIDFFGALR 17

>ACS2_ZYGBA (Q96VC7) Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA|
           ligase 2) (Acyl-activating enzyme 2)
          Length = 675

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 72  DNVSDESVVKIVDTFPGQSIDFFGALR 152
           DNVS+ +VV I D   GQS+  F +L+
Sbjct: 556 DNVSESAVVGIADELTGQSVIAFVSLK 582


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,947,317
Number of Sequences: 219361
Number of extensions: 248526
Number of successful extensions: 567
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)