| Clone Name | baal4i23 |
|---|---|
| Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 210 bits (534), Expect = 1e-54 Identities = 101/146 (69%), Positives = 109/146 (74%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 AM+G G IAPE LGK GL+P ETA+ W Q G IPPAGTY YWAD YTLFV EMAL+GFA Sbjct: 107 AMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFA 166 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 EHRR QDW PGSMGKQYFLGLEK LGGSGDPAYPGGP+FNPLGFG Sbjct: 167 EHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFG-KDEKSMKELKLKE 225 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGPF 440 NGRLAMLA LG +QA+ TGVGP+ Sbjct: 226 IKNGRLAMLAILGYFIQALVTGVGPY 251
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 90.1 bits (222), Expect = 2e-18 Identities = 62/147 (42%), Positives = 75/147 (51%), Gaps = 1/147 (0%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVP-PETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGF 179 AM+GV GM+ PE K+G++ PE W AG QY+A TLFV E L + Sbjct: 103 AMLGVAGMLLPEVFTKIGIINVPE----WYDAGK------EQYFASSSTLFVIEFILFHY 152 Query: 180 AEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXX 359 E RR QD NPGS+ + ++Y G+ YPGG IFNPL F Sbjct: 153 VEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGG-IFNPLNFAP-----TQEAKEK 204 Query: 360 XXXNGRLAMLAFLGMSLQAIFTGVGPF 440 NGRLAMLAFLG +Q TG GPF Sbjct: 205 ELANGRLAMLAFLGFVVQHNVTGKGPF 231
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 89.4 bits (220), Expect = 4e-18 Identities = 56/145 (38%), Positives = 72/145 (49%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 AM+G G+ PE L K+G++ + W AG +Y+ D TLFV E+ LIG+A Sbjct: 114 AMLGAAGIFIPEFLTKIGVLNTPS---WYTAGE------QEYFTDTTTLFVIELVLIGWA 164 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 E RR D PG + K G D YPGG F+PLG+G+ Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPAKIKELRTKE 222 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAMLA +G Q I+TG GP Sbjct: 223 IKNGRLAMLAVMGAWFQHIYTGTGP 247
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 89.4 bits (220), Expect = 4e-18 Identities = 55/145 (37%), Positives = 72/145 (49%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 AM+G G+ PE L K+G++ + W AG +Y+ D TLF+ E+ LIG+A Sbjct: 114 AMLGAAGIFIPELLTKIGILNTPS---WYTAGE------QEYFTDTTTLFIVELVLIGWA 164 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 E RR D PG + K G D YPGG F+PLG+G+ Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPAKIKELRTKE 222 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAMLA +G Q I+TG GP Sbjct: 223 IKNGRLAMLAVMGAWFQHIYTGTGP 247
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 55.8 bits (133), Expect = 5e-08 Identities = 53/151 (35%), Positives = 67/151 (44%), Gaps = 6/151 (3%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAG-TYQYWAD--PYTLF---VFEM 164 AM+G G I PEAL K G A+ W + GA+ G T Y+ P L V E+ Sbjct: 121 AMLGAAGFIIPEALNKYGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEV 179 Query: 165 ALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXX 344 L+G AE+ R+ + GL+ D +PGGP F+PLG Sbjct: 180 VLLGGAEYYRITN-------------GLD-----FEDKLHPGGP-FDPLGLAKDPEQGAL 220 Query: 345 XXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM A LG +QA TG GP Sbjct: 221 LKVKEIK-NGRLAMFAMLGFFIQAYVTGEGP 250
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL DP YPGG F+PLG Sbjct: 163 CQVVLMGFVEGYRV----GGGPLGE----GL--------DPIYPGGA-FDPLGLADDPDA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 54.3 bits (129), Expect = 1e-07 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AGA I G Y +P ++ Sbjct: 103 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA 160 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL+K YPGG F+PLG Sbjct: 161 VQVVLMGFVEGYRV----GGGPLGE----GLDK--------VYPGGA-FDPLGLADDPDT 203 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 204 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 236
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 53.9 bits (128), Expect = 2e-07 Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 10/155 (6%) Frame = +3 Query: 3 AMMGVVGMIAPEALGK-VGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTLFV------- 155 AM+G +G + PE L K VG+ E W +AG+ I G Y +P + Sbjct: 106 AMLGALGCVFPEVLQKWVGVEFKEPV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVL 163 Query: 156 -FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXX 332 F++ L+G E R+ GL+ G G+ YPGG F+PLG Sbjct: 164 GFQVLLMGLVEGFRIN--------------GLDGV--GEGNDLYPGGQYFDPLGLADDPV 207 Query: 333 XXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 TFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 241
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 53.5 bits (127), Expect = 2e-07 Identities = 51/154 (33%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G I PE L K G+ E W +AGA I G Y +P ++ Sbjct: 104 AMLGALGCIFPELLSKNGVQFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA 161 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ GL DP YPGG F+PLG Sbjct: 162 TQVVLMGLIEGYRV----GGGPLGE----GL--------DPLYPGGA-FDPLGLADDPEA 204 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 205 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 53.5 bits (127), Expect = 2e-07 Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTLFV-------- 155 AM+G +G I PE L K V + + W +AG+ I G Y +P + Sbjct: 103 AMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLG 161 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 F++ L+G E R+ PG G G+ YPGG F+PLG Sbjct: 162 FQVVLMGLVEGFRINGL--PGV--------------GEGNDLYPGGQYFDPLGLADDPTT 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 53.1 bits (126), Expect = 3e-07 Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL+K YPGG F+PLG Sbjct: 163 AQVVLMGFVEGYRV----GGGPLGE----GLDKI--------YPGGA-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 53.1 bits (126), Expect = 3e-07 Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 77 AMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA 134 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL+K YPGG F+PLG Sbjct: 135 SQVVLMGFVEGYRV----GGGPLGE----GLDKI--------YPGGA-FDPLGLADDPEA 177 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 178 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 210
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 52.8 bits (125), Expect = 4e-07 Identities = 49/154 (31%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AGA I G Y +P ++ Sbjct: 108 AMLGALGCLTPELLAKSGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA 165 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 166 CQVVLMGAVEGYRVAG--GP--------------LGEVTDPIYPGGS-FDPLGLADDPDT 208 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 209 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 241
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 52.4 bits (124), Expect = 5e-07 Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL+K YPGG F+PLG Sbjct: 163 CQVVLMGFVEGYRV----GGGPLGE----GLDKI--------YPGGA-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 52.4 bits (124), Expect = 5e-07 Identities = 50/154 (32%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCTFPELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+GF E R+ G +G+ GL DP YPGG F+PLG Sbjct: 163 TQVVLMGFVEGYRV----GGGPLGE----GL--------DPLYPGGA-FDPLGLADDPDS 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 1e-06 Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 163 CQVILMGAVEGYRVAG--GP--------------LGEVEDPIYPGGS-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 51.2 bits (121), Expect = 1e-06 Identities = 50/154 (32%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K GL E W +AGA I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G++G+ GL DP PGG F+PLG Sbjct: 164 CQVVLMGLIEGYRV----GGGTLGE----GL--------DPLLPGGA-FDPLGLADDPEA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 207 CAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 51.2 bits (121), Expect = 1e-06 Identities = 48/150 (32%), Positives = 62/150 (41%), Gaps = 5/150 (3%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPY-----TLFVFEMA 167 AM+G +G IA EAL T I W AG + Y P TL E+ Sbjct: 148 AMLGTLGAIAVEAL---------TGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL 198 Query: 168 LIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXX 347 ++G+ E +R + L EK + YPGG F+PLG Sbjct: 199 VVGYIEFQRNSE------------LDPEKRI-------YPGG-YFDPLGLAADPEKLDTL 238 Query: 348 XXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 + RLAM+AFL +LQA FTG GP Sbjct: 239 KLAEIK-HSRLAMVAFLIFALQAAFTGKGP 267
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 50.8 bits (120), Expect = 1e-06 Identities = 49/153 (32%), Positives = 64/153 (41%), Gaps = 9/153 (5%) Frame = +3 Query: 6 MMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTL--------FVF 158 ++G +GM+ PE L + A W +AGA I G Y +P + Sbjct: 113 LLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAV 172 Query: 159 EMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXX 338 ++ L+G E R+ N G G+ GL DP YPG F+PLG Sbjct: 173 QVVLMGLVEGYRV----NGGPAGE----GL--------DPLYPG-EAFDPLGLADDPDTF 215 Query: 339 XXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM A LG +QAI TG GP Sbjct: 216 AELKVKEIK-NGRLAMFACLGFFVQAIVTGKGP 247
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 50.8 bits (120), Expect = 1e-06 Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AGA I G Y +P ++ Sbjct: 114 AMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA 171 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 172 CQVILMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLGLAEDPEA 214 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 215 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 247
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 50.8 bits (120), Expect = 1e-06 Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ E LG + D YPGG F+PLG T Sbjct: 163 TQVILMGAVEGYRVAG---------------EGPLGEAEDLLYPGGS-FDPLGLATDPEA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 207 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 50.4 bits (119), Expect = 2e-06 Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 3/148 (2%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPE--TAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIG 176 AM+ V G+I PEALG V + AIP QA + G W T+ E I Sbjct: 95 AMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYL---GQPVPWGTLPTILAIEFLAIA 151 Query: 177 FAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXX 356 F EH+R SM K S YPGG F+PLG+ + Sbjct: 152 FVEHQR--------SMEKD-----------SEKKKYPGG-AFDPLGY-SKDPAKFEELKV 190 Query: 357 XXXXNGRLAMLAFLGMSL-QAIFTGVGP 437 NGRLA+LA +G + Q+ + G GP Sbjct: 191 KEIKNGRLALLAIVGFCVQQSAYLGTGP 218
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 50.4 bits (119), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W + G+ I G QY +P ++ Sbjct: 104 AMLGALGCVFPELLARNGVKFGEAV--WFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWA 161 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 162 CQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLADDAEA 204 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 205 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 50.4 bits (119), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 163 VQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGA-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 50.4 bits (119), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 101 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 158 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 159 VQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 201 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 202 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 234
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 50.1 bits (118), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 163 CQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 50.1 bits (118), Expect = 2e-06 Identities = 44/150 (29%), Positives = 60/150 (40%), Gaps = 5/150 (3%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPY-----TLFVFEMA 167 AM+ +G ++ E L T + W AG + Y P TL E+ Sbjct: 147 AMLATLGALSVEWL---------TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVL 197 Query: 168 LIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXX 347 +IG+ E +R + L EK L YPGG F+PLG Sbjct: 198 VIGYIEFQRNAE------------LDSEKRL-------YPGGKFFDPLGLAADPEKTAQL 238 Query: 348 XXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 + RLAM+AFLG ++QA TG GP Sbjct: 239 QLAEIK-HARLAMVAFLGFAVQAAATGKGP 267
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 50.1 bits (118), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 102 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 159 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 160 CQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 202 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 203 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 235
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 50.1 bits (118), Expect = 2e-06 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 95 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 152 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 153 CQVVLMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLGLADDPEA 195 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 196 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 228
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 50.1 bits (118), Expect = 2e-06 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 46 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 103 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 104 CQVVLMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLGLADDPEA 146 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 147 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 179
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 2e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 49.7 bits (117), Expect = 3e-06 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 103 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 160 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 161 TQVILMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLGLADDPEA 203 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 204 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 236
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKHIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE + G+ E W +AGA I G Y +P ++ Sbjct: 107 AMLGALGCVFPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLAEDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 108 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 165 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 166 TQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 208 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 209 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 241
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 109 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 166 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 167 TQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 209 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 210 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 242
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 49.7 bits (117), Expect = 3e-06 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 96 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 153 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 154 TQVILMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLGLADDPEA 196 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 197 LAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 229
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 49.7 bits (117), Expect = 3e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 164 CQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 207 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 49.3 bits (116), Expect = 4e-06 Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPY--------TLFV 155 AM+G +G + PE L + G+ E W +AGA I G Y P ++ Sbjct: 118 AMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWA 175 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 176 CQVILMGAIEGYRVAG--GP--------------LGEVTDPIYPGGN-FDPLGLADDPDA 218 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 219 FADVKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 49.3 bits (116), Expect = 4e-06 Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPY--------TLFV 155 AM+G +G + PE L + G+ E W +AGA I G Y P ++ Sbjct: 118 AMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWA 175 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 176 CQVILMGAIEGYRVAG--GP--------------LGEVTDPIYPGGN-FDPLGLADDPDA 218 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 219 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 49.3 bits (116), Expect = 4e-06 Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P +++ Sbjct: 104 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWA 161 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 162 TQVILMGAVEGYRVAG----GPLGEIV------------DPLYPGGS-FDPLGLAEDPER 204 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 205 SAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 237
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 49.3 bits (116), Expect = 4e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 163 CQVVLMGAIEGYRVAG----GPLGEVV------------DPLYPGGT-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FADVKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 49.3 bits (116), Expect = 4e-06 Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L K G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ GL+K YPGG F+PLG Sbjct: 163 SQVVLMGLIEGYRV----GGGPLGE----GLDKI--------YPGGA-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 49.3 bits (116), Expect = 4e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 163 CQVILMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 206 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 49.3 bits (116), Expect = 4e-06 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ + LG DP YPGG F+PLG Sbjct: 164 CQVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QA+ TG GP Sbjct: 207 FAELKVKEIK-NGRLAMFSMFGFFVQALVTGKGP 239
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 49.3 bits (116), Expect = 4e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 164 CQVVLMGAVEGYRIAG----GPLGEIV------------DPLYPGGS-FDPLGLAERPQA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 207 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 49.3 bits (116), Expect = 4e-06 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 165 CQVVLMGAIEGYRVAG--GP--------------LGEVTDPLYPGGS-FDPLGLADDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 48.9 bits (115), Expect = 6e-06 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 162 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 163 CQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 205 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 GRLAML+ G +QAI TG GP Sbjct: 206 FGELKVKELK-KGRLAMLSMFGFFVQAIVTGKGP 238
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 48.9 bits (115), Expect = 6e-06 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 7/110 (6%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPY---TLFVFEMALI 173 AM+ V+G+ +A T IPW +AGA P A P+ TL ++ L+ Sbjct: 112 AMLAVLGIFVGQAW---------TGIPWFEAGADPGA------VAPFSFGTLLGTQLLLM 156 Query: 174 GFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 311 G+ E +R D+++P S ++ E + +G+ YPGG F+PL Sbjct: 157 GWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPL 206
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 48.9 bits (115), Expect = 6e-06 Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 5/150 (3%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPY-----TLFVFEMA 167 AM+ +G I E L T + W AG + Y P TL E+ Sbjct: 144 AMLATLGAITVEWL---------TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVL 194 Query: 168 LIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXX 347 +IG+ E +R + L EK L YPGG F+PLG + Sbjct: 195 VIGYIEFQRNAE------------LDSEKRL-------YPGGKFFDPLGLASDPVKKAQL 235 Query: 348 XXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 + RLAM+ FLG ++QA TG GP Sbjct: 236 QLAEIK-HARLAMVGFLGFAVQAAATGKGP 264
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 48.5 bits (114), Expect = 7e-06 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W + G+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAV--WFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ + LG DP YPGG F+PLG Sbjct: 165 CQVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 48.5 bits (114), Expect = 7e-06 Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ LG + D YPGG F+PLG T Sbjct: 164 TQVILMGAVEGYRVAG---------------NGPLGEAEDLLYPGGS-FDPLGLATDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 48.5 bits (114), Expect = 7e-06 Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ LG + D YPGG F+PLG T Sbjct: 164 TQVILMGAVEGYRVAG---------------NGPLGEAEDLLYPGGS-FDPLGLATDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 48.1 bits (113), Expect = 9e-06 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE + G+ E W +AG+ I G Y +P ++ Sbjct: 106 AMLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 163 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 164 CQVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEA 206 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 207 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 47.8 bits (112), Expect = 1e-05 Identities = 50/154 (32%), Positives = 66/154 (42%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTL--------FV 155 A++G +G++ PE L + V + W +AGA I G Y + + Sbjct: 90 ALLGALGILTPELLSQYAGVQFGEPV-WFKAGAQIFADGGLNYLGNESLIHAQSIIATLA 148 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G AE R N GS G FL D YPGGP F+PLG Sbjct: 149 VQVVLMGLAEAYRA----NGGSEG---FLD-------DLDTLYPGGP-FDPLGLADDPDT 193 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + LG +QAI TG GP Sbjct: 194 FAELKVKEIK-NGRLAMFSCLGFFVQAIVTGKGP 226
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 47.8 bits (112), Expect = 1e-05 Identities = 46/154 (29%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE + G+ E W +AG+ I G Y +P ++ Sbjct: 107 AMLGALGCVFPELFARNGVKFGEAV--WLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PLG Sbjct: 165 CQVLLMGAVEGYRVAG--GP--------------LGVVVDPLYPGGS-FDPLGLAEDPEA 207 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 FAELKVKETK-NGRLAMFSMFGFFIQAIVTGKGP 240
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 47.4 bits (111), Expect = 2e-05 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E W +AG+ I G Y +P ++ Sbjct: 68 AMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 125 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 126 TQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEVPEA 168 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G + AI TG GP Sbjct: 169 FAELKVKELK-NGRLAMFSMFGFFVPAIVTGKGP 201
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 46.6 bits (109), Expect = 3e-05 Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 9/153 (5%) Frame = +3 Query: 6 MMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFVF 158 M+G +G + PE + G+ E W +AG+ I G Y +P ++ Sbjct: 107 MLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWAC 164 Query: 159 EMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXX 338 ++ L+G E R+ G +G+ DP YPGG F+PLG Sbjct: 165 QVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAF 207 Query: 339 XXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 208 AELEVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 45.1 bits (105), Expect = 8e-05 Identities = 49/154 (31%), Positives = 62/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTLFV-------- 155 AM+G +G PE L K G E W +AGA I G Y +P + Sbjct: 93 AMLGALGCQTPELLAKSGTKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSA 150 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ N G G+ GL DP YPG F+PLG Sbjct: 151 VQVILMGLIEGYRV----NGGPAGE----GL--------DPLYPGES-FDPLGLADDPDT 193 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLA + G +QAI TG GP Sbjct: 194 FAELKVKEIK-NGRLASFSMFGFFVQAIVTGKGP 226
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 45.1 bits (105), Expect = 8e-05 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPY---TLFVFEMALI 173 AM V+G+ +A + IPW +AGA P A P+ TL ++ L+ Sbjct: 107 AMAAVLGIFVGQAW---------SGIPWFEAGADPGA------IAPFSFGTLLGTQLILM 151 Query: 174 GFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 311 G+ E +R D+++P S ++ E + +G+ YPGG F+PL Sbjct: 152 GWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPL 201
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 44.7 bits (104), Expect = 1e-04 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM+G +G + PE L + G+ E + W +AG+ I G Y + ++ Sbjct: 85 AMLGALGCVFPELLARNGVKFGEAS--WFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWA 142 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ P LG DP YPGG F+PL Sbjct: 143 TQVILMGAVEGYRIAG--GP--------------LGEVTDPIYPGGS-FDPLALADDPEA 185 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 186 FAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 218
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 44.3 bits (103), Expect = 1e-04 Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADPYTL--------FV 155 A++G +G++ PE L V + W +AGA I G Y P + Sbjct: 95 ALLGALGILTPELLSTYAGVKFGEPV-WFKAGAQIFSEGGLDYLGSPALIHAQNIVATLA 153 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ N G G+ GL DP YPG F+PLG Sbjct: 154 VQVVLMGLIEGYRV----NGGPAGE----GL--------DPLYPGES-FDPLGLADDPDT 196 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM + G +QAI TG GP Sbjct: 197 FAELKVKEIK-NGRLAMFSCFGFFVQAIVTGKGP 229
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 32 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 89
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 4/148 (2%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAG-TYQYWADPYT---LFVFEMAL 170 AM+ +G + EA T + W +AG + G +Y + P++ L E+ L Sbjct: 143 AMLACLGALVAEAT---------TGVSWVEAGKVELDGASYAGLSLPFSITQLIWIEVIL 193 Query: 171 IGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXX 350 +G AE R + NP YPGG +F+PL + Sbjct: 194 VGGAEFYRNSET-NPEKR------------------CYPGG-VFDPLKLASEDEERAFRL 233 Query: 351 XXXXXXNGRLAMLAFLGMSLQAIFTGVG 434 + RLAM++F G +QA+ TG G Sbjct: 234 KTAEIKHARLAMVSFFGYGVQALSTGEG 261
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 39.7 bits (91), Expect = 0.003 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP Y GG F+PLG G NGRLAM + G +QAI TG GP Sbjct: 180 LGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 39.3 bits (90), Expect = 0.004 Identities = 25/60 (41%), Positives = 28/60 (46%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG DP YPG F+PLG NGRLAM + G +QAI TG GP Sbjct: 66 LGEGLDPLYPGDA-FDPLGLADDPEAKAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 123
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 38.9 bits (89), Expect = 0.006 Identities = 25/55 (45%), Positives = 26/55 (47%) Frame = +3 Query: 273 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 D YPGGP F+PLG NGRLAM LG QAI TG GP Sbjct: 43 DRLYPGGP-FDPLGLADDPDTFPELKVKEIK-NGRLAMSGMLGFYAQAIVTGEGP 95
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 38.9 bits (89), Expect = 0.006 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYT---LFVFEMALI 173 AM V+G+ +A + IPW +AGA P A P++ L ++ L+ Sbjct: 107 AMAAVLGIFVGQAW---------SGIPWFEAGADPGA------IAPFSFGSLLGTQLLLM 151 Query: 174 GFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 311 G+ E +R D+++ S + E + +G+ YPGG F+PL Sbjct: 152 GWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPL 201
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 37.0 bits (84), Expect = 0.022 Identities = 25/60 (41%), Positives = 29/60 (48%) Frame = +3 Query: 258 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 LG + D YPGG F+PL T NGRLAM + G +QAI TG GP Sbjct: 40 LGEAEDLLYPGGS-FDPLASLTDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 97
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 37.0 bits (84), Expect = 0.022 Identities = 41/145 (28%), Positives = 53/145 (36%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 AM+ VG I PE LGK W +AG D L MA+ Sbjct: 236 AMLCTVGCIVPELLGKGA---------WFEAGDS---------VDGLKLGFITMAIAAPT 277 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 E+ R Q +N + G D +YPG F+PL T Sbjct: 278 EYWRGQGGFN--------------WQKGELDRSYPG---FDPLNLTT------DYTRAAE 314 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLA+ A G++ Q + TG P Sbjct: 315 VKNGRLALTAVAGLTAQYLATGESP 339 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = +3 Query: 273 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 437 D +YPG F+PL T NGRLAM G+ +Q+ TG P Sbjct: 479 DQSYPG---FDPLNLTTEYTKEAEIK------NGRLAMNGMFGLEVQSHVTGKSP 524
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 35.8 bits (81), Expect = 0.049 Identities = 39/145 (26%), Positives = 53/145 (36%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 +M+ +VG I PE LGK W + G D L MA+ Sbjct: 208 SMLAIVGSIVPELLGKGA---------WFEVGNS---------VDGIKLGFILMAIAAPT 249 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 E+ R +N + G+ D +YPG F+PL T Sbjct: 250 EYWRGNGGFN--------------WDKGTADRSYPG---FDPLKLTTDYTKREIK----- 287 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM LG++ Q + TG P Sbjct: 288 --NGRLAMTGLLGLTFQYLATGESP 310 Score = 35.4 bits (80), Expect = 0.063 Identities = 40/145 (27%), Positives = 54/145 (37%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFA 182 AM+ +VG + PE LG G+ W ++ W + + ALI Sbjct: 18 AMLAIVGCVYPELLGN-GV--------W-----------FEVWNK---VDFYRFALISLQ 54 Query: 183 EHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXX 362 L+ W G G G EKY D +YPG F+P T Sbjct: 55 VVAPLEYWRGNGGFGWD---GEEKY-----DRSYPG---FDPCNLTTEYTKAAEIK---- 99 Query: 363 XXNGRLAMLAFLGMSLQAIFTGVGP 437 NGRLAM+ G+ +Q T GP Sbjct: 100 --NGRLAMIGMFGLEVQNHVTAQGP 122
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 33.1 bits (74), Expect = 0.31 Identities = 41/148 (27%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Frame = +3 Query: 3 AMMGVVGMIAPEALGKVGLVPPETAIPWXQAGA-IPPAGTYQYWADP--------YTLFV 155 AM +G I PE L +G E W +AGA I G Y +P ++ Sbjct: 109 AMSAALGCIFPELLSVMGQGFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWT 166 Query: 156 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 335 ++ L+G E R+ LG DP YPG F+ LG Sbjct: 167 TKVILMGAVEGYRIA----------------RGPLGEVTDPLYPGS--FDSLGLAEDTEA 208 Query: 336 XXXXXXXXXXXNGRLAMLAFLGMSLQAI 419 NGRLAM + G +QAI Sbjct: 209 FAELKVKELK-NGRLAMFSMFGFFVQAI 235
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 31.6 bits (70), Expect = 0.91 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 10/46 (21%) Frame = +3 Query: 216 GSMGKQYFLGLEKY---LGGSGDPAYPGGPIF-------NPLGFGT 323 GS G+Q G Y GG+G+P YPG P F PLG GT Sbjct: 321 GSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGT 366
>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)| (Lysyl endopeptidase) Length = 653 Score = 31.6 bits (70), Expect = 0.91 Identities = 28/95 (29%), Positives = 38/95 (40%) Frame = +3 Query: 21 GMIAPEALGKVGLVPPETAIPWXQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRRLQ 200 G+ P + G P + + G + T +D Y VF G A RL Sbjct: 392 GVTEPGSSGSPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGR-VFTSWTGGGAAASRLS 450 Query: 201 DWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 305 DW +P S G Q+ GL+ G G P P P+ N Sbjct: 451 DWLDPASTGAQFIDGLD---SGGGTPNTP--PVAN 480
>CILP2_HUMAN (Q8IUL8) Cartilage intermediate layer protein 2 precursor (CILP-2)| [Contains: Cartilage intermediate layer protein 2 C1; Cartilage intermediate layer protein 2 C2] Length = 1156 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/32 (46%), Positives = 15/32 (46%) Frame = -2 Query: 225 PWNPGCTSPGAAGALRXRSVPSRTRRACRGRP 130 PW P S G LR R PS AC GRP Sbjct: 154 PWGPCSGSCGPGRRLRRRHCPSPAGDACPGRP 185
>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor| (Cytochrome c-1) Length = 325 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = -2 Query: 216 PGCTSPGAAGALRXRSVPSRTRRA----CRGRPSTGR 118 PG ++PG G R R +P RT +A + PS GR Sbjct: 21 PGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGR 57
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 213 PGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 305 PGS G + F+G G G+P PG P F+ Sbjct: 1032 PGSTGLRGFIGFPGLPGDQGEPGSPGPPGFS 1062 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 Query: 213 PGSMGKQYFLGLEKYLGGSGDPAYPG 290 PG G + LGL +LG GDP PG Sbjct: 508 PGRQGSKGDLGLPGWLGTKGDPGPPG 533
>ZN101_HUMAN (Q8IZC7) Zinc finger protein 101 (Zinc finger protein HZF12)| Length = 436 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/52 (28%), Positives = 20/52 (38%) Frame = -3 Query: 167 CHLEHEERVGVGPVLVGACRRDGARLXPRDRRLRGHQTHLAQGLRGDHAHHP 12 CHL + + GV P C + R DR +R H H G+ P Sbjct: 89 CHLNKKSQTGVKPCKCSVCGKVFLRHSFLDRHMRAHAGHKRSECGGEWRETP 140
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.9 bits (63), Expect = 5.9 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = +2 Query: 188 PAAPGLVQPGFHGEAVLPGSREVXXXXXXXXXXXXAHLQP-TRVRHQEREGDEGAQAQGD 364 P A QP G PG ++ A QP T+ + Q+++ +G Q Sbjct: 3745 PKADTQAQPQMQGRQAAPGPQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQGLGQQAP 3804 Query: 365 QERPSRHARL 394 Q+ PS+ ARL Sbjct: 3805 QQAPSQ-ARL 3813
>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4| Length = 771 Score = 28.9 bits (63), Expect = 5.9 Identities = 26/97 (26%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Frame = +2 Query: 161 DGTDRXRRAPAAPGLVQPGFHGEAVLP-----GSREVXXXXXXXXXXXXAHLQPTR---V 316 +G A AA + P A P SR H P R V Sbjct: 340 NGVPPAAAAAAATAALPPAAAAVAAAPEVPPAASRRESLAASSTAGANDHHEPPVREPPV 399 Query: 317 RHQEREGDEGAQAQGDQERPSRHARLPRHVAAGHLHR 427 RH+ +E ++ SR R RH A GH HR Sbjct: 400 RHERQE------SRSHHRNESRSERADRHGAHGHHHR 430
>GLYA_ANADE (Q2ILI1) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 417 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 15 VVGMIAPEALGKVGLVPPETAIPW 86 + G +A EALGK G+ + IPW Sbjct: 325 LTGKVAEEALGKAGITVNKNMIPW 348
>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II| Length = 510 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -3 Query: 92 LXPRDRRLRGHQTHLAQGLRGDHAHHPHHR 3 + PRD RL + H Q L+ +H H H+ Sbjct: 213 MAPRDMRLTPEEQHHQQQLQAEHHHQQQHQ 242
>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III| Length = 514 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -3 Query: 92 LXPRDRRLRGHQTHLAQGLRGDHAHHPHHR 3 + PRD RL + H Q L+ +H H H+ Sbjct: 213 MAPRDMRLTPEEQHHQQQLQAEHHHQQQHQ 242
>VL1_HPV18 (P06794) Major capsid protein L1| Length = 568 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Frame = +3 Query: 123 QYWADPY--TLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGP 296 Q ADPY ++F FA H W G+MG L Y+ G+G PA PG Sbjct: 297 QMSADPYGDSMFFCLRREQLFARHF----WNRAGTMGDTVPQSL--YIKGTGMPASPGSC 350 Query: 297 IFNPLGFGT 323 +++P G+ Sbjct: 351 VYSPSPSGS 359 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,114,942 Number of Sequences: 219361 Number of extensions: 1051874 Number of successful extensions: 4522 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 3668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4431 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)