ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4i22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1150 bits (580), Expect = 0.0 Identities = 592/596 (99%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 882 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 883 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 942 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 1002 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 1062 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 1063 ggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttc 1122 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1123 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 1182 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1183 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 1242 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 1302 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 1362 Query: 541 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 1418
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 1150 bits (580), Expect = 0.0 Identities = 592/596 (99%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 627 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 628 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 687 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 747 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 807 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 808 ggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttc 867 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 927 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 987 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 1047 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 1107 Query: 541 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 1163
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 983 bits (496), Expect = 0.0 Identities = 571/596 (95%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 743 ggcgggaccacacagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatc 802 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 803 gccgatgcccccaccaatgtgcagctcccaggcatgtacaacaaggaggagaacccacgt 862 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 863 gtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgat 922 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 923 ggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaag 982 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 983 ggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttc 1042 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1043 ccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtg 1102 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1103 cgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcgg 1162 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 ||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1163 gacggaccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacggg 1222 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 1282 Query: 541 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 596 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1283 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttcta 1338
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 809 bits (408), Expect = 0.0 Identities = 468/488 (95%) Strand = Plus / Plus Query: 109 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 168 |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 1 gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60 Query: 169 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 228 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120 Query: 229 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 288 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180 Query: 289 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 348 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240 Query: 349 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 408 ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300 Query: 409 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 468 ||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360 Query: 469 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420 Query: 529 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 480 Query: 589 tccttcta 596 ||||||| Sbjct: 481 accttcta 488
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 803 bits (405), Expect = 0.0 Identities = 548/596 (91%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 754 ggcgggaccacccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatc 813 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 814 gccgacgcgcccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgt 873 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 || |||||| |||||||||| ||||| ||||||||||| ||||| || || |||||||| Sbjct: 874 gtccccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgac 933 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 |||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 934 ggtcgtatggagaagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaag 993 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 994 ggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttc 1053 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 1054 ccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtg 1113 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1114 cgcaagtgggtgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgg 1173 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 ||||| ||||| |||||||||||||| |||||||| || |||||| |||| |||||||| Sbjct: 1174 gacggacccgtcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggc 1233 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 540 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1234 cacatgcttgtccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatg 1293 Query: 541 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 596 ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 1294 agccaggcagctctgggtgatgcgaacaaggatgccatgaagactggttccttcta 1349
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 755 bits (381), Expect = 0.0 Identities = 542/596 (90%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 764 ggcgggaccacccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatc 823 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 824 gccgacgcgcccaccaacgtgcagcttccggggatgtacaacaaggaggagaacccccgt 883 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 || ||||| | |||||||| ||||| || |||||||| ||||| || || || | ||| Sbjct: 884 gttcccattatngtcaccggcaacgacttttcgacgctgtacgccccccttattcctgac 943 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 944 ggtcgtatggagaagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaag 1003 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1004 ggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttc 1063 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1064 ccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtg 1123 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1124 cgcaagtgggtgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgg 1183 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 ||||| ||||| |||||||||||||| |||||||| || |||||| |||| |||||||| Sbjct: 1184 gacggacccgtcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggc 1243 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 540 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1244 cacatgcttgtccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatg 1303 Query: 541 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttcta 596 ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 1304 agccaggcagctctgggtgatgcgaacaaggatgccatgaagactggttccttcta 1359
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 611 bits (308), Expect = e-171 Identities = 314/316 (99%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6565 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 6624 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 6625 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 6684 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6685 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 6744 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6745 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 6804 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6805 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 6864 Query: 301 ccaggacaatccattg 316 |||||||||||||||| Sbjct: 6865 ccaggacaatccattg 6880 Score = 557 bits (281), Expect = e-155 Identities = 281/281 (100%) Strand = Plus / Plus Query: 316 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 376 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 556 ggtgatgctaaccaggatgcgatgaagactggttccttcta 596 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttcta 7301 Score = 355 bits (179), Expect = 1e-94 Identities = 326/375 (86%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 3438 ggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 3497 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 || || || |||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 3498 gcggacgcgcccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgc 3557 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 3558 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgac 3617 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 3618 gggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaag 3677 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||||| ||| |||||| | || || | | | || ||||||||| Sbjct: 3678 ggcatcttccgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttc 3737 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || || ||||| ||||| ||||| || ||||| || |||||||||||||| |||||| Sbjct: 3738 ccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtg 3797 Query: 361 cgcaagtgggtcggc 375 ||||||||||||||| Sbjct: 3798 cgcaagtgggtcggc 3812 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 496 gagcaggacaatgtcaagcgtgtgcagct 524 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 478 bits (241), Expect = e-131 Identities = 271/281 (96%) Strand = Plus / Plus Query: 316 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 375 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 376 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 435 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 556 ggtgatgctaaccaggatgcgatgaagactggttccttcta 596 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttcta 282
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 375 bits (189), Expect = e-100 Identities = 321/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 812 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 813 aacccaaccaacgtgcagctccctgggatgtacaacaaggaggacaacccccgtgtcccc 872 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 873 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 932 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 933 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 992 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 993 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1052 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1053 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1112 Query: 367 tgggt 371 ||||| Sbjct: 1113 tgggt 1117 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttcta 1342
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 781 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 782 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 841 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 842 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 901 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 902 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 961 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 962 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1021 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1022 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1081 Query: 367 tgggt 371 ||||| Sbjct: 1082 tgggt 1086 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttcta 1311
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 776 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 777 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 836 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 837 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 896 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 897 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 956 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 957 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1016 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1017 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1076 Query: 367 tgggt 371 ||||| Sbjct: 1077 tgggt 1081 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttcta 1306
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 824 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 825 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 884 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 885 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 944 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 945 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 1004 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 1005 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1064 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1065 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1124 Query: 367 tgggt 371 ||||| Sbjct: 1125 tgggt 1129 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttcta 1354
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 775 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 776 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 835 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 836 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 895 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 896 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 955 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 956 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1015 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1016 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1075 Query: 367 tgggt 371 ||||| Sbjct: 1076 tgggt 1080 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttcta 1305
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 813 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 814 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 873 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 874 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 933 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 934 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 993 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 994 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1053 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1054 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1113 Query: 367 tgggt 371 ||||| Sbjct: 1114 tgggt 1118 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttcta 1343
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 596 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 597 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 656 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 657 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 716 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 717 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 776 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 777 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 836 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 837 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 896 Query: 367 tgggt 371 ||||| Sbjct: 897 tgggt 901 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttcta 1126
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 817 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 818 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 877 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 878 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 937 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 938 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 997 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 998 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1057 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1058 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1117 Query: 367 tgggt 371 ||||| Sbjct: 1118 tgggt 1122 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttcta 1347
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 367 bits (185), Expect = 3e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 811 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 812 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 871 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 872 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 931 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 932 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 991 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 992 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1051 Query: 307 caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 366 |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||||||| Sbjct: 1052 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1111 Query: 367 tgggt 371 ||||| Sbjct: 1112 tgggt 1116 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttcta 1341
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 357 bits (180), Expect = 3e-95 Identities = 438/524 (83%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 719 ggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 778 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 || || || ||||||||||||||| |||| || ||||||||||||||||||||||| || Sbjct: 779 gcggacgcgcccaccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgc 838 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||||||||| ||||| || || ||||| || Sbjct: 839 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggac 898 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 899 ggccgcatggagaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaag 958 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||||| ||| |||||| | || || | | | || ||||||||| Sbjct: 959 ggcatcttccgcaccgacaacgtccccgacgaggccgtggtgaggctggtggacaccttc 1018 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || || ||||| ||||| ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1019 ccggggcagtccatcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtg 1078 Query: 361 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 420 ||||||||||||||| | ||| |||||||||| |||| |||| || ||||| || Sbjct: 1079 cgcaagtgggtcggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccagg 1138 Query: 421 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 480 || ||||| ||| ||||| ||||| |||||||| |||||||||| | |||||||| Sbjct: 1139 gaggggccgccgacgttcgaccagcccaagatgaccatcgagaagctcatggagtacggc 1198 Query: 481 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagct 524 |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 1199 cacatgctggtccaggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 355 bits (179), Expect = 1e-94 Identities = 326/375 (86%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 869 ggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 928 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 || || || |||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 929 gcggacgcgcccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgc 988 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 989 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgac 1048 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 1049 gggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaag 1108 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||||| ||| |||||| | || || | | | || ||||||||| Sbjct: 1109 ggcatcttccgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttc 1168 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || || ||||| ||||| ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1169 ccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtg 1228 Query: 361 cgcaagtgggtcggc 375 ||||||||||||||| Sbjct: 1229 cgcaagtgggtcggc 1243 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 496 gagcaggacaatgtcaagcgtgtgcagct 524 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 331 bits (167), Expect = 2e-87 Identities = 293/335 (87%) Strand = Plus / Plus Query: 37 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 96 ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| Sbjct: 1 gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60 Query: 97 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 156 |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||| Sbjct: 61 tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120 Query: 157 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 216 || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180 Query: 217 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 276 ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240 Query: 277 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 336 |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| ||| Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300 Query: 337 gctcgggtgtacgacgatgaggtgcgcaagtgggt 371 || || || |||||||| ||||||||||||||||| Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttcta 560
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 325 bits (164), Expect = 9e-86 Identities = 272/308 (88%) Strand = Plus / Minus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 108995 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 108936 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 108935 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 108876 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 108875 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 108816 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 108815 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 108756 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 108755 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 108696 Query: 307 caatccat 314 |||||||| Sbjct: 108695 caatccat 108688 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttcta 108314 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 112678 ggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatc 112619 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaac 102 || || ||||||||||||||||||||| || ||||||||| Sbjct: 112618 gcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 247 ttcc 250 |||| Sbjct: 112459 ttcc 112456 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 322 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 371 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactc 416 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 325 bits (164), Expect = 9e-86 Identities = 272/308 (88%) Strand = Plus / Minus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 30872 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 30813 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 30812 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 30753 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 30752 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 30693 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 30692 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 30633 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 30632 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 30573 Query: 307 caatccat 314 |||||||| Sbjct: 30572 caatccat 30565 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttcta 30191 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 34555 ggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatc 34496 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaac 102 || || ||||||||||||||||||||| || ||||||||| Sbjct: 34495 gcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 247 ttcc 250 |||| Sbjct: 34336 ttcc 34333 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 322 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 371 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactc 416 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 325 bits (164), Expect = 9e-86 Identities = 272/308 (88%) Strand = Plus / Minus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28304134 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 28304075 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 28304074 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 28304015 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 28304014 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 28303955 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 28303954 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 28303895 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 28303894 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 28303835 Query: 307 caatccat 314 |||||||| Sbjct: 28303834 caatccat 28303827 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttcta 28303453 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 28307817 ggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatc 28307758 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaac 102 || || ||||||||||||||||||||| || ||||||||| Sbjct: 28307757 gcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 247 ttcc 250 |||| Sbjct: 28307598 ttcc 28307595 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 322 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 371 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactc 416 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 325 bits (164), Expect = 9e-86 Identities = 272/308 (88%) Strand = Plus / Minus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28286583 accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 28286524 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 28286523 aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 28286464 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||| Sbjct: 28286463 atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 28286404 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 28286403 atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 28286344 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 |||| |||||||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 28286343 ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 28286284 Query: 307 caatccat 314 |||||||| Sbjct: 28286283 caatccat 28286276 Score = 113 bits (57), Expect = 7e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 447 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 448 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 507 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 508 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 567 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 568 caggatgcgatgaagactggttccttcta 596 || || |||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttcta 28285902 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 28290266 ggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatc 28290207 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaac 102 || || ||||||||||||||||||||| || ||||||||| Sbjct: 28290206 gcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 247 ttcc 250 |||| Sbjct: 28290047 ttcc 28290044 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 322 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 371 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 gagaacattggcaagaggctggtgaactc 416 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 319 bits (161), Expect = 6e-84 Identities = 317/369 (85%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 405 ggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatc 464 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||| Sbjct: 465 gccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgc 524 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 525 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 584 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 585 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 644 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 ||||||||| | ||||||| ||| | ||| |||| ||||| |||||||||||||| Sbjct: 645 ggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttc 704 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || |||||||||||||| |||||||| ||| | || |||| |||||||| |||||| Sbjct: 705 cccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtg 764 Query: 361 cgcaagtgg 369 | |||||| Sbjct: 765 aggaagtgg 773 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 397 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 456 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 457 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 516 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 517 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 576 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 577 atgaagactggttccttcta 596 || |||||||| |||||||| Sbjct: 981 atcaagactggatccttcta 1000
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 319 bits (161), Expect = 6e-84 Identities = 317/369 (85%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 599 ggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatc 658 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||| Sbjct: 659 gccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgc 718 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 719 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 778 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 779 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 838 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 ||||||||| | ||||||| ||| | ||| |||| ||||| |||||||||||||| Sbjct: 839 ggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttc 898 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || |||||||||||||| |||||||| ||| | || |||| |||||||| |||||| Sbjct: 899 cccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtg 958 Query: 361 cgcaagtgg 369 | |||||| Sbjct: 959 aggaagtgg 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 397 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 456 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 457 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 516 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 517 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 576 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 577 atgaagactggttccttcta 596 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 311 bits (157), Expect = 1e-81 Identities = 316/369 (85%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 706 ggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatc 765 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| |||||||||||| |||||||| ||||||||||||||| | ||||||||||| Sbjct: 766 gccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgc 825 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 826 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 885 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 886 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 945 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 ||||||||| | ||||||| ||| | ||| |||| ||||| |||||||||||||| Sbjct: 946 ggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttc 1005 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || |||||||||||||| |||||||| ||| | || |||| |||||||| |||||| Sbjct: 1006 cccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtg 1065 Query: 361 cgcaagtgg 369 | |||||| Sbjct: 1066 aggaagtgg 1074 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 400 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 459 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 460 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 519 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 520 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 579 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 580 aagactggttccttcta 596 |||||||| |||||||| Sbjct: 1285 aagactggatccttcta 1301
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 311 bits (157), Expect = 1e-81 Identities = 316/369 (85%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatc 628 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| |||||||||||| |||||||| ||||||||||||||| | ||||||||||| Sbjct: 629 gccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgc 688 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 689 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 748 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 749 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 808 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 ||||||||| | ||||||| ||| | ||| |||| ||||| |||||||||||||| Sbjct: 809 ggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttc 868 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 || || |||||||||||||| |||||||| ||| | || |||| |||||||| |||||| Sbjct: 869 cccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggtg 928 Query: 361 cgcaagtgg 369 | |||||| Sbjct: 929 aggaagtgg 937 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 400 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 459 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 460 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 519 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 520 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 579 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 580 aagactggttccttcta 596 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 283 bits (143), Expect = 3e-73 Identities = 305/359 (84%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 325 ggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatc 384 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 385 gccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgc 444 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 445 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 504 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 505 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 564 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||| ||| || ||| |||||| || | |||||||||||| Sbjct: 565 ggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttc 624 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 359 || || || ||||| ||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 625 cctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 556 ggtgatgctaaccaggatgcgatgaagactggttccttct 595 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 276 bits (139), Expect = 8e-71 Identities = 304/359 (84%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 720 ggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatc 779 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 780 gccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgc 839 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 840 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 899 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 900 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 959 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||| ||| || ||| |||||| || | |||||||||||| Sbjct: 960 ggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttc 1019 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 359 || || || ||||| || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 1020 cctggccagtccatcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 556 ggtgatgctaaccaggatgcgatgaagactggttccttct 595 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 256 bits (129), Expect = 7e-65 Identities = 297/353 (84%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 266 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 325 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 326 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 385 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 |||||||||||||||||||| ||||| ||||| ||||| ||||| || || || || || Sbjct: 386 gtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgac 445 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 446 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 505 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||| ||| |||||| |||||| || |||||||| ||||| Sbjct: 506 ggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttc 565 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 353 || || || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 566 ccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 256 bits (129), Expect = 7e-65 Identities = 297/353 (84%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 274 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 333 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 334 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 393 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 |||||||||||||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 394 gtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 453 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 454 gggcgcatggacaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaag 513 Query: 241 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 300 || ||||||| |||||| ||| |||||| |||||| || |||||||| ||||| Sbjct: 514 ggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttc 573 Query: 301 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 353 || || || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 574 ccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 626
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 252 bits (127), Expect = 1e-63 Identities = 223/255 (87%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 599 ggaaccacccaatacaccgtcaacaaccagatggttaacgctaccctcatgaacatcgcc 658 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| |||||||||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 659 gataaccccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtc 718 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 |||||| ||||||| |||||||||||||| || || || |||||||| |||||||| ||| Sbjct: 719 cccatcatcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggt 778 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 243 ||||||||||| || |||||||| || || | ||||||||||||||||| ||||| ||| Sbjct: 779 cgtatggagaaattttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggt 838 Query: 244 atcttccagaccgac 258 || ||| ||||||| Sbjct: 839 attttcaggaccgac 853 Score = 48.1 bits (24), Expect = 0.033 Identities = 54/64 (84%) Strand = Plus / Plus Query: 287 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 346 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 347 acga 350 |||| Sbjct: 942 acga 945
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 280 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 339 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 340 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 399 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 459 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 520 ggcatcttcc 529
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 286 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 345 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 346 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 405 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 406 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 465 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 466 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 525 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 526 ggcatcttcc 535
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 250 bits (126), Expect = 5e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 284 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 343 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 344 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 403 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 404 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 463 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 464 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 523 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 524 ggcatcttcc 533
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 284 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 343 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 344 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 403 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 404 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 463 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 464 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 523 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 524 ggcatcttcc 533
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 280 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 339 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 340 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 399 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 459 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 520 ggcatcttcc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 280 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 339 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 340 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 399 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 459 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 520 ggcatcttcc 529
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 282 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 341 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 342 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 401 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 461 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 522 ggcatcttcc 531
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 286 ggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatc 345 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||| ||||| ||| ||||| ||| Sbjct: 346 gccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgt 405 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 406 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 465 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 466 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 525 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 526 ggcatcttcc 535
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 236 bits (119), Expect = 7e-59 Identities = 272/323 (84%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| || |||||||| |||||||||||||| ||||||||||| |||||||| || || Sbjct: 842 accacacaatacaccgtgaacaaccagatggttaacgccaccctcatgaacattgctgac 901 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||||||||| || || |||||||| |||||||||||| | |||||| ||||||| ||| Sbjct: 902 aaccccaccaatgtccaactccctggtatgtacaacaagcaagagaacgcccgtgttccc 961 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 || ||||||| |||||||| ||||| || | |||||||| || ||||||||||||||| Sbjct: 962 attatcgtcactggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgt 1021 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 |||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 1022 atggagaagttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatc 1081 Query: 247 ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 306 ||| |||||||||||| ||| || || |||||| |||||||||||||||| || Sbjct: 1082 ttcaggaccgacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggc 1141 Query: 307 caatccattgactttttcggtgc 329 ||||| ||||| || |||||||| Sbjct: 1142 caatctattgatttcttcggtgc 1164
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 236 bits (119), Expect = 7e-59 Identities = 216/250 (86%) Strand = Plus / Plus Query: 1 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 60 ||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 720 ggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatc 779 Query: 61 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 120 ||||| ||||||||||||||||||||| || ||||||||||||||||| || | Sbjct: 780 gccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaannnnngc 839 Query: 121 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 180 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 840 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 899 Query: 181 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 240 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 900 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 959 Query: 241 ggtatcttcc 250 || ||||||| Sbjct: 960 ggcatcttcc 969 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 556 ggtgatgctaaccaggatgcgatgaagactggttccttct 595 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 898 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 957 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 958 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 898 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 957 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 958 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 927 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 986 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 987 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 809 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 868 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 869 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 929 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 724 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 783 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 784 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 843 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 844 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 903 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 904 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Minus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 14390 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 14331 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 14330 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 14271 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 14270 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 14211 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14210 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 812 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 871 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 872 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 932 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 992 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 809 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 868 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 869 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 929 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 812 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 871 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 872 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 932 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 992 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 232 bits (117), Expect = 1e-57 Identities = 207/237 (87%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 2893 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 2952 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 2953 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 3012 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 3013 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 3072 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3073 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 228 bits (115), Expect = 2e-56 Identities = 220/255 (86%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 598 ggaaccacccaatacaccgtcaacaaccagatggttaatgctaccctcatgaacatcgcc 657 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| |||||||||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 658 gataaccccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtc 717 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 ||||| ||||||| |||||||||||||| || || || |||||||| |||||||| ||| Sbjct: 718 cccattatcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggt 777 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 243 ||||||||||| || |||||||| || || | ||||||||| ||||||| ||||| ||| Sbjct: 778 cgtatggagaaattttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggt 837 Query: 244 atcttccagaccgac 258 || ||| ||||||| Sbjct: 838 attttcaggaccgac 852 Score = 48.1 bits (24), Expect = 0.033 Identities = 54/64 (84%) Strand = Plus / Plus Query: 287 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 346 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 347 acga 350 |||| Sbjct: 941 acga 944
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 224 bits (113), Expect = 3e-55 Identities = 206/237 (86%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 801 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 860 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| ||||| || || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 861 accaacgtccagcttccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 920 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 921 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 980 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 981 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 224 bits (113), Expect = 3e-55 Identities = 206/237 (86%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| |||||||| |||||||| ||||| || || |||||||| || ||| ||| Sbjct: 927 cagtacactgtcaacaatcagatggttaacgcaacactcatgaacattgctgataaccca 986 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 987 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 220 bits (111), Expect = 4e-54 Identities = 204/235 (86%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||| ||||||||||| |||||||| |||||||| |||||||| || Sbjct: 800 ggaaccacccaatacactgtcaacaaccaaatggtgaatgccaccctcatgaacattgct 859 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| ||| || ||||| ||||| || || ||||||||||||||||||||||||||||| Sbjct: 860 gataacccgacaaacgtccagcttccaggtatgtacaacaaggaggagaacccccgtgtc 919 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 || ||| | |||||||||||||||||||| || | ||||||||||| |||||||| ||| Sbjct: 920 ccaatcattgtcaccggtaacgatttctcaacattgtacgctcctctcatccgtgacggt 979 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 238 |||||||||||||||||||||||||||||||| || || ||||| || ||||||| Sbjct: 980 cgtatggagaagttctactgggctcccacccgcgaagatcgtattggagtctgca 1034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 436 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 495 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 496 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 555 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 556 ggtgatgctaac 567 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Plus Query: 292 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 351 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 352 gatgaggtgcgcaagtgg 369 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 214 bits (108), Expect = 2e-52 Identities = 222/260 (85%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||| || |||||||| |||||||||||||| || ||||||||||| Sbjct: 784 ggaaccacacaatacacagtgaacaaccaaatggtgaacgccacactcatgaacatcgct 843 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| |||||||||||| |||||||| || |||||||||||||| |||||||| ||||| Sbjct: 844 gataaccccaccaacgttcagctccccggtatgtacaacaaggaagagaaccctcgtgtt 903 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 || ||| | |||||||||||||||||||||||||| ||||| || || |||||||| ||| Sbjct: 904 ccgatcattgtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggt 963 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 243 |||||||||||||| |||||||| |||||| | || || | |||||||| |||| ||| Sbjct: 964 cgtatggagaagttttactgggcacccaccagggaagataggatcggtgtttgcacaggt 1023 Query: 244 atcttccagaccgacaatgt 263 || ||| |||||||||||| Sbjct: 1024 attttcaggaccgacaatgt 1043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 292 gacaccttcccaggacaatccattgactttttcggtgctctg 333 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 206 bits (104), Expect = 6e-50 Identities = 212/248 (85%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| || ||||||||||||||||| |||||||| |||||||| || || ||| || Sbjct: 796 tacactgttaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaaca 855 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || ||||||||||| |||||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 856 aatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcattgtc 915 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||| |||||||| | ||||||||||| |||||||||||||||||||| || Sbjct: 916 actggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaaaaa 975 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 255 |||||||||||||| ||| | || |||||||| ||||||||||||||||| ||| ||| Sbjct: 976 ttctactgggctcctaccagggaagaccgtattggtgtctgcaagggtattttcaggact 1035 Query: 256 gacaatgt 263 |||||||| Sbjct: 1036 gacaatgt 1043 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 526 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 575 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 202 bits (102), Expect = 9e-49 Identities = 216/254 (85%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||| || ||||||||||||||||| ||||| || |||||||| || Sbjct: 789 ggaaccacccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgct 848 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| |||||| || |||||||| ||||| |||||||||||||| || ||| |||||||| Sbjct: 849 gataaccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtg 908 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 |||||| | ||||| |||||||||||||| || || || |||||||| |||||||||||| Sbjct: 909 cccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggt 968 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 243 ||||||||||||||||||||||| || || | || ||||| || ||||| |||||||| Sbjct: 969 cgtatggagaagttctactgggcaccaacaagggaagaccgcattggtgtttgcaaggga 1028 Query: 244 atcttccagaccga 257 || |||| |||||| Sbjct: 1029 attttccggaccga 1042
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 194 bits (98), Expect = 2e-46 Identities = 197/230 (85%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| || |||||||| |||||||||||||| |||||||| || |||||||| || || Sbjct: 2584 accacccaatacaccgtaaacaaccagatggttaacgccacactcatgaacattgctgac 2643 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||| || || |||||||| |||||||||||| |||| || ||||||| ||| Sbjct: 2644 aacccaaccaatgtccaactccctggtatgtacaacaagcaggacaatgcccgtgtcccc 2703 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| | || || |||||||||||||| || | |||||||| || ||||||||||||||| Sbjct: 2704 atcattgttactggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgt 2763 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctg 236 |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2764 atggagaagttctactgggctcccacccgtgaggaccgtattggtgtctg 2813
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 188 bits (95), Expect = 1e-44 Identities = 200/235 (85%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||| ||||||||||| |||||||| ||||| || |||||||| || Sbjct: 222 ggaaccacacaatacactgtcaacaaccaaatggtgaatgccacactcatgaacattgct 281 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| ||||||||| || || |||||||| |||||||||||||| || || | |||||| Sbjct: 282 gataaccccaccaatgtccaactccctggtatgtacaacaaggaagacaatgctcgtgtg 341 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 |||||| | ||||||||||| |||||||| || || || |||||||| |||||||||||| Sbjct: 342 cccatcattgtcaccggtaatgatttctcaacactttatgctcctctcatccgtgatggt 401 Query: 184 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 238 |||||||||||||||||||||||||| || | || || ||||| |||||||||| Sbjct: 402 cgtatggagaagttctactgggctcctactagagaagatcgtattggtgtctgca 456 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 280 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 339 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 340 cgggtgtacgacgatgaggtgcgcaagtgggt 371 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 188 bits (95), Expect = 1e-44 Identities = 176/203 (86%) Strand = Plus / Plus Query: 4 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 63 |||||||| || ||||| || ||||||||||||||||| ||||| || |||||||| || Sbjct: 793 ggaaccacccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgct 852 Query: 64 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 123 ||| ||| || || |||||||| ||||| |||||||||||||| |||||| |||||||| Sbjct: 853 gataaccctacaaatgtgcagcttcctggtatgtacaacaaggaagagaacgcccgtgtg 912 Query: 124 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 183 |||||| | ||||||||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 913 cccatcattgtcaccggtaatgatttctcaacgctgtatgctcctctcattcgtgatggg 972 Query: 184 cgtatggagaagttctactgggc 206 ||||||||||||||||||||||| Sbjct: 973 cgtatggagaagttctactgggc 995
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 186 bits (94), Expect = 6e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| || |||||||| |||||||||||||| |||||||| || ||||||| || || Sbjct: 956 accacccaatacaccgtaaacaaccagatggttaacgccacactcctgaacattgctgac 1015 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| ||||| || || |||||||| |||||||||||| |||| || ||||||| ||| Sbjct: 1016 aacccaaccaatgtccaactccctggtatgtacaacaagcaggacaatgcccgtgtcccc 1075 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 ||| | || || |||||||||||||| || | |||||||| || ||||||||||||||| Sbjct: 1076 atcattgttactggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgt 1135 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctg 236 |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1136 atggagaagttctactgggctcccacccgtgaggaccgtattggtgtctg 1185 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 287 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 346 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 347 acgacgatga 356 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 182 bits (92), Expect = 9e-43 Identities = 209/248 (84%) Strand = Plus / Plus Query: 17 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 76 |||| ||||||||||||||||| ||||||||||| |||||||| || || ||| |||| Sbjct: 1 acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60 Query: 77 acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 136 | || ||||||||||| |||||||||||| |||| || | ||||| |||||| |||| | Sbjct: 61 atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120 Query: 137 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 196 | |||||||| ||||| || | || |||||||| ||||||||||||||||||||||| | Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180 Query: 197 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 256 |||||||||| ||||| ||||| |||||||| ||||| |||| ||||||||| ||| | Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240 Query: 257 acaatgtc 264 |||||||| Sbjct: 241 acaatgtc 248
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| |||||||||||||||||||| ||||| || ||||||||||| ||| ||| || Sbjct: 118 tacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccgaca 177 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||| | |||||| || | || ||||| | ||| Sbjct: 178 aatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattattgtc 237 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||| ||||| || | || |||||||| |||||||||||||||||||||||| Sbjct: 238 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 297 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 255 ||||| ||||| || || | || || | || ||||| ||||||||||| ||| |||| Sbjct: 298 ttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggacc 357 Query: 256 gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 315 ||||| || ||| || |||| || ||||| ||||| |||||||| |||||||| ||| Sbjct: 358 gacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatctatt 417 Query: 316 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 ||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 418 gacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 159 bits (80), Expect = 1e-35 Identities = 188/224 (83%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| || ||||| ||||||||||| |||||||| |||||||| || || ||| || Sbjct: 796 tacactgttaacaatcagatggtgaatgccaccctcatgaacatagctgacaacccaaca 855 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || ||||| |||||||||||||||||||| |||||||| ||||| |||||| | ||| Sbjct: 856 aatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcattgtc 915 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||| ||||| || | || || ||||| ||||||||||| ||||||||||| Sbjct: 916 actggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatggagaaa 975 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 239 ||||||||||| |||||| | || |||||||| ||||||||||| Sbjct: 976 ttctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 8.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 483 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 542 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 543 ccaggcagctctgggtgatgctaa 566 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 159 bits (80), Expect = 1e-35 Identities = 200/240 (83%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| ||| ||| Sbjct: 1622 cagtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataaccct 1681 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||||||||| || ||| ||||||| ||| | ||| |||||||| ||||| ||| Sbjct: 1682 accaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtc 1741 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || || ||||| || || |||||||| || || |||||| Sbjct: 1742 tgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggag 1801 Query: 193 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 252 |||| ||||||| ||||||||||| ||||| ||||| ||||||| ||| ||||||||| Sbjct: 1802 aagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 496 gagcaggacaatgtcaagcgtgtgcagct 524 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 155 bits (78), Expect = 2e-34 Identities = 165/194 (85%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| |||||||| |||||||| || || || || |||||||| || ||| ||| ||| Sbjct: 226 tacacagtcaacaatcagatggttaatgctacactcatgaacattgctgataacccaacc 285 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || || |||||||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 286 aatgtccaactccctggaatgtacgacaaggaggagaacccccgtgtgcccatcatcgtc 345 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || || ||||||||||| | || || ||||| || ||||| |||||||||||||| ||| Sbjct: 346 acaggaaacgatttctcagcactatatgctccccttatccgcgatggtcgtatggaaaag 405 Query: 196 ttctactgggctcc 209 |||||||||||||| Sbjct: 406 ttctactgggctcc 419
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 155 bits (78), Expect = 2e-34 Identities = 204/246 (82%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 66 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 accacccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 746 Query: 67 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 126 ||| |||||||| ||||| || || ||||||| || ||||||| ||| || |||||| Sbjct: 747 aacccgaccaacgtccagctgcccggtgtgtacaagaacgaggagatccctcgcgtgccc 806 Query: 127 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 186 || || ||| || ||||| ||||| || || ||||| || |||||||| ||||| || Sbjct: 807 attgtgtgcacgggcaacgacttctccaccctgtacgcgcccctgatccgcgatggccgc 866 Query: 187 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 246 |||||||||| ||||||| |||||||| || ||||| ||||| || |||| ||| ||| Sbjct: 867 atggagaagtactactggaaccccacccgcgaggaccgcatcggcgtgtgcatgggcatc 926 Query: 247 ttccag 252 |||||| Sbjct: 927 ttccag 932 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 292 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 351 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 352 ga 353 || Sbjct: 1032 ga 1033
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 147 bits (74), Expect = 5e-32 Identities = 194/234 (82%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| || |||||||| |||||||| || ||||| |||||||| || || || ||| Sbjct: 639 tacactgtgaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaacc 698 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||||| ||||| || ||||| || ||| ||||| Sbjct: 699 aatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtc 758 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || ||||| || |||||||| | ||||||||||| || |||||||||||||||||||| Sbjct: 759 acaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaa 818 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 819 ttctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 147 bits (74), Expect = 5e-32 Identities = 194/234 (82%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| || |||||||| |||||||| || ||||| |||||||| || || || ||| Sbjct: 812 tacactgtgaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaacc 871 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||||| ||||| || ||||| || ||| ||||| Sbjct: 872 aatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtc 931 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || ||||| || |||||||| | ||||||||||| || |||||||||||||||||||| Sbjct: 932 acaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaa 991 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 249 ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 992 ttctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 145 bits (73), Expect = 2e-31 Identities = 277/345 (80%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| |||||||||||||||||||| ||||| || |||||||| || ||| ||| || Sbjct: 762 tacactgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgaca 821 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 ||||| |||||||| || |||||||||||| | |||||| || | || ||||| | ||| Sbjct: 822 aacgtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtc 881 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||| ||||| || | || |||||||| |||||||||||||||||||||||| Sbjct: 882 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 941 Query: 196 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 255 ||||| ||||| || || | || || | || ||||| ||||||||||| ||| |||| Sbjct: 942 ttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggacc 1001 Query: 256 gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 315 ||||| || ||| || | || | ||||| ||||| |||||||| |||||||| ||| Sbjct: 1002 gacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctatt 1061 Query: 316 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 360 ||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 1062 gacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 143 bits (72), Expect = 8e-31 Identities = 189/226 (83%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| ||||||||||||||||| ||||| || || |||||||| || ||| ||| Sbjct: 793 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 852 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | Sbjct: 853 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 912 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||| |||||||||||||| || | |||| |||||| |||| |||||| ||||||||| Sbjct: 913 tgcactggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggag 972 Query: 193 aagttct--actgggctcccacccgtgacgaccgtatcggtgtctg 236 ||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 973 aagttcttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 |||||||||||||||||||||||||| |||||||| |||||||| || || ||| || Sbjct: 773 tacaccgtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaaca 832 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||| | |||||| || | || ||||| | ||| Sbjct: 833 aatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattattgtc 892 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||| ||||| || | || |||||||| |||||||||||||||||||||||| Sbjct: 893 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 952 Query: 196 ttctactgggc 206 ||||||||||| Sbjct: 953 ttctactgggc 963
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 96 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 155 ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| || Sbjct: 1 gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60 Query: 156 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 215 | || ||||| || ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 61 cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120 Query: 216 tgacgaccgtatcggtgtctgca 238 ||||| ||||| |||||||||| Sbjct: 121 cgacgatcgtattggtgtctgca 143
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| ||||||||||| |||||||| ||||| || |||||||| || || ||| || Sbjct: 32 tacactgtcaacaaccaaatggtgaatgccactctcatgaacattgctgacaacccgaca 91 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||| | ||||| || | || || || ||||| Sbjct: 92 aatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtc 151 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||||||||| || | || ||||| || |||||||||||||||||||||||| Sbjct: 152 actggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaag 211 Query: 196 ttctactgggc 206 ||||||||||| Sbjct: 212 ttctactgggc 222 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 280 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 329 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| ||||||||||| |||||||| ||||| || |||||||| || || ||| || Sbjct: 792 tacactgtcaacaaccaaatggtgaatgccactctcatgaacattgctgacaacccgaca 851 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || |||||||| || |||||||||||| | ||||| || | || || || ||||| Sbjct: 852 aatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtc 911 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||||||||| || | || ||||| || |||||||||||||||||||||||| Sbjct: 912 actggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaag 971 Query: 196 ttctactgggc 206 ||||||||||| Sbjct: 972 ttctactgggc 982
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccga 65 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 accacccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccga 1957 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 292 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 351 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 352 ga 353 || Sbjct: 2722 ga 2723
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||| Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661 Query: 73 accaacgtgcagct 86 |||||||||||||| Sbjct: 445660 accaacgtgcagct 445647
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 87.7 bits (44), Expect = 4e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| || |||||||||||||| || |||||||| |||||||| || ||| ||| Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 || || || ||| | ||||| |||||||||||||| || || || ||||| || || || Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 || || || || |||||||| || | || ||||| |||| |||||||| ||||||||| Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 667 aagttctactgg 678
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 85.7 bits (43), Expect = 2e-13 Identities = 154/191 (80%) Strand = Plus / Plus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| ||||||||||| |||||||| || || || |||||||| || ||| ||| || Sbjct: 809 tacactgtcaacaaccaaatggtgaatgctacactcatgaacattgctgataacccgacg 868 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || || ||||| || |||||||||||| | ||||| || | || || || | ||| Sbjct: 869 aatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacctattattgtc 928 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || |||||||||||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 929 actggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggagaaa 988 Query: 196 ttctactgggc 206 ||||||||||| Sbjct: 989 ttctactgggc 999 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 280 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 333 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 85.7 bits (43), Expect = 2e-13 Identities = 172/215 (80%) Strand = Plus / Plus Query: 13 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 72 |||||||| || || ||||||||||| || || || || |||||||| || || ||| Sbjct: 804 cagtacacagtgaataaccagatggtaaatgctactcttatgaacattgctgacaaccca 863 Query: 73 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 132 ||||| |||||||| || |||||||| |||||||| || || ||| | || |||||| | Sbjct: 864 accaatgtgcagctaccaggcatgtataacaaggaagaaaatcccagagttcccatcata 923 Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 || || |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| Sbjct: 924 gtaactggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggat 983 Query: 193 aagttctactgggctcccacccgtgacgaccgtat 227 || |||||||||||||| || ||||| || ||||| Sbjct: 984 aaattctactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 289 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 348 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 349 gacgatgaggtgcgcaagtggg 370 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 463 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 522 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 523 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 578 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 75.8 bits (38), Expect = 1e-10 Identities = 164/206 (79%) Strand = Plus / Minus Query: 16 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 75 ||||| ||||||||||||||||| || || ||||| |||||||| || || ||| ||| Sbjct: 7097 tacacagtcaacaaccagatggtaaatgcaaccctcatgaacattgctgacaaccctacc 7038 Query: 76 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 135 || || || || || || ||||||||||| || ||||| |||| || || ||| ||||| Sbjct: 7037 aatgttcaacttcccggtatgtacaacaaagaagagaatgcccgcgtccctatcatcgtc 6978 Query: 136 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 195 || || || || ||||| ||| | || |||||| | || |||||||| |||||||| || Sbjct: 6977 actggcaatgacttctctacgttgtatgctcctttaattcgtgatggacgtatggaaaaa 6918 Query: 196 ttctactgggctcccacccgtgacga 221 ||||||||||| || || |||||||| Sbjct: 6917 ttctactgggcacctactcgtgacga 6892
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 933 aagttctactgg 944
>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence Length = 262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 22 gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 81 ||||| |||||||||||||| || ||||| |||||||| || ||| || || || || Sbjct: 97 gtcaataaccagatggtgaatgcaacccttatgaacattgctgataatccaactaatgtt 156 Query: 82 cagctccctggcatgtacaacaaggaggagaa 113 ||||||||||| ||||||||||| ||||||| Sbjct: 157 cagctccctggtatgtacaacaaacaggagaa 188
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 133 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 192 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 193 aagttctactgg 204 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 142 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 201 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 202 tgg 204 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 163 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 206 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 163 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 206 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 agccaggcagctctgggtgatg 562 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 caagatcgtcgacaccttccc 302 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 2.1 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 133 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 191 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 192 gaagttctactgg 204 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggtgtctgcaagggtatcttccag 252 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 agcgtgtgcagcttgctgac 531 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agtgacgagtctgtcgtcaa 284 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 caggagcaggacaatgtcaa 512 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cgtgacgaccgtatcggtgt 233 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tgatgaacatcgccgatgcc 69 |||||||||||||||||||| Sbjct: 1896 tgatgaacatcgccgatgcc 1877
>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tgatgaacatcgccgatgcc 69 |||||||||||||||||||| Sbjct: 1897 tgatgaacatcgccgatgcc 1878
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 caggagcaggacaatgtcaa 512 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence Length = 42802 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tgatgaacatcgccgatgcc 69 |||||||||||||||||||| Sbjct: 34318 tgatgaacatcgccgatgcc 34337
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 tgagccaggcagctctgggtgatg 562 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA complete cds Length = 2742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tgatgaacatcgccgatgcc 69 |||||||||||||||||||| Sbjct: 1882 tgatgaacatcgccgatgcc 1863 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,363,988 Number of Sequences: 3902068 Number of extensions: 3363988 Number of successful extensions: 63117 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62753 Number of HSP's gapped (non-prelim): 316 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
