| Clone Name | baal4f15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019147.1| Zea mays clone Contig802.F mRNA sequence Length = 902 Score = 258 bits (130), Expect = 6e-66 Identities = 181/198 (91%) Strand = Plus / Minus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 552 atgtttatcctgatggacgtgtttgcatttctattcttcatccacctggtgaagatccca 493 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 ||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 492 atggttatgagcttgcaagcgaacgatggacaccagtgcacacggttgaaagtatagttc 433 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||| Sbjct: 432 tgagcatcatttcgatgctctctagtccaaatgacgagtctccagcgaatatcgaagctg 373 Query: 181 ctaaggactggagagaaa 198 | ||||| |||||||||| Sbjct: 372 ccaaggattggagagaaa 355
>gb|AF032468.1|AF032468 Zea mays ubiquitin-conjugating enzyme protein E2 (ubc7) mRNA, complete cds Length = 776 Score = 258 bits (130), Expect = 6e-66 Identities = 181/198 (91%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 271 atgtttatcctgatggacgtgtttgcatttctattcttcatccacctggtgaagatccca 330 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 ||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 331 atggttatgagcttgcaagcgaacgatggacaccagtgcacacggttgaaagtatagttc 390 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||| Sbjct: 391 tgagcatcatttcgatgctctctagtccaaatgacgagtctccagcgaatatcgaagctg 450 Query: 181 ctaaggactggagagaaa 198 | ||||| |||||||||| Sbjct: 451 ccaaggattggagagaaa 468
>ref|NM_190524.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 222 bits (112), Expect = 3e-55 Identities = 175/196 (89%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 251 atgtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatccca 310 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 |||||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 311 atggttatgagcttgcgagtgagcgttggacaccagtgcatacggttgagagcatagttc 370 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||| ||| ||||||| || || || ||||||||||||||||| | Sbjct: 371 tgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcag 430 Query: 181 ctaaggactggagaga 196 ||||||| |||||||| Sbjct: 431 ctaaggaatggagaga 446
>dbj|AK112030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E11, full insert sequence Length = 1158 Score = 222 bits (112), Expect = 3e-55 Identities = 175/196 (89%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 492 atgtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatccca 551 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 |||||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 552 atggttatgagcttgcgagtgagcgttggacaccagtgcatacggttgagagcatagttc 611 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||| ||| ||||||| || || || ||||||||||||||||| | Sbjct: 612 tgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcag 671 Query: 181 ctaaggactggagaga 196 ||||||| |||||||| Sbjct: 672 ctaaggaatggagaga 687
>dbj|AK104148.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B05, full insert sequence Length = 1123 Score = 222 bits (112), Expect = 3e-55 Identities = 175/196 (89%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 404 atgtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatccca 463 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 |||||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 464 atggttatgagcttgcgagtgagcgttggacaccagtgcatacggttgagagcatagttc 523 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||| ||| ||||||| || || || ||||||||||||||||| | Sbjct: 524 tgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcag 583 Query: 181 ctaaggactggagaga 196 ||||||| |||||||| Sbjct: 584 ctaaggaatggagaga 599
>dbj|AK099038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135H01, full insert sequence Length = 1111 Score = 222 bits (112), Expect = 3e-55 Identities = 175/196 (89%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || || ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 447 atgtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatccca 506 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 |||||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 507 atggttatgagcttgcgagtgagcgttggacaccagtgcatacggttgagagcatagttc 566 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||| ||| ||||||| || || || ||||||||||||||||| | Sbjct: 567 tgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcag 626 Query: 181 ctaaggactggagaga 196 ||||||| |||||||| Sbjct: 627 ctaaggaatggagaga 642
>ref|XM_475366.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 218 bits (110), Expect = 5e-54 Identities = 176/198 (88%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || ||||| || ||||||||||| |||||||||||||| || ||||||| Sbjct: 251 atgtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatccca 310 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | |||||||||||||| || ||||||||||| || ||||| || ||||| |||||||||| Sbjct: 311 acggttatgagcttgcgagcgaacggtggacacctgtgcatacagttgaaagtatagttc 370 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct: 371 tgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcgg 430 Query: 181 ctaaggactggagagaaa 198 ||||||| |||||||||| Sbjct: 431 ctaaggattggagagaaa 448
>dbj|AK111999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F08, full insert sequence Length = 1037 Score = 218 bits (110), Expect = 5e-54 Identities = 176/198 (88%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || ||||| || ||||||||||| |||||||||||||| || ||||||| Sbjct: 370 atgtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatccca 429 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | |||||||||||||| || ||||||||||| || ||||| || ||||| |||||||||| Sbjct: 430 acggttatgagcttgcgagcgaacggtggacacctgtgcatacagttgaaagtatagttc 489 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct: 490 tgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcgg 549 Query: 181 ctaaggactggagagaaa 198 ||||||| |||||||||| Sbjct: 550 ctaaggattggagagaaa 567
>dbj|AK111857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021F14, full insert sequence Length = 1125 Score = 218 bits (110), Expect = 5e-54 Identities = 176/198 (88%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || ||||| || ||||||||||| |||||||||||||| || ||||||| Sbjct: 360 atgtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatccca 419 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | |||||||||||||| || ||||||||||| || ||||| || ||||| |||||||||| Sbjct: 420 acggttatgagcttgcgagcgaacggtggacacctgtgcatacagttgaaagtatagttc 479 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct: 480 tgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcgg 539 Query: 181 ctaaggactggagagaaa 198 ||||||| |||||||||| Sbjct: 540 ctaaggattggagagaaa 557
>dbj|AK098861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O01, full insert sequence Length = 912 Score = 210 bits (106), Expect = 1e-51 Identities = 175/198 (88%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || ||||| || ||||||||||| |||||||||||||| || ||||||| Sbjct: 371 atgtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatccca 430 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | |||||||||||||| || ||||| ||||| || ||||| || ||||| |||||||||| Sbjct: 431 acggttatgagcttgcgagcgaacgttggacacctgtgcatacagttgaaagtatagttc 490 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct: 491 tgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcgg 550 Query: 181 ctaaggactggagagaaa 198 ||||||| |||||||||| Sbjct: 551 ctaaggattggagagaaa 568
>gb|BT016440.1| Zea mays clone Contig273 mRNA sequence Length = 1135 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||||||||| || ||||| || || || ||||||||||||||||||||||| ||||| | Sbjct: 495 atgtctatcctgatgggcgggtttgtatctctattcttcatccacctggtgaagatccaa 554 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | ||||||||||| |||||||| || ||||| || |||||||| || || || ||||||| Sbjct: 555 acggttatgagctagcaagtgagcgatggacacctgtgcacacagtagaaagcatagttc 614 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 |||||||||| || ||||||||||||||||| || ||||| |||||||| ||||| || | Sbjct: 615 tgagcattatatcaatgctctctagtccaaatgatgagtctccagcaaacattgaggcag 674 Query: 181 ctaaggactggag 193 ||||||| ||||| Sbjct: 675 ctaaggaatggag 687
>emb|AJ002959.1|ZMAJ2959 Zea mays mRNA for ubiquitin carrier protein UBC7 Length = 780 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||||||||| || ||||| || || || ||||||||||||||||||||||| ||||| | Sbjct: 330 atgtctatcctgatgggcgggtttgtatctctattcttcatccacctggtgaagatccaa 389 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | ||||||||||| |||||||| || ||||| || |||||||| || || || ||||||| Sbjct: 390 acggttatgagctcgcaagtgagcgatggacacctgtgcacacagtagaaagcatagttc 449 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 |||||||||| || ||||||||||||||||| || ||||| |||||||| ||||| || | Sbjct: 450 tgagcattatatcaatgctctctagtccaaatgatgagtctccagcaaacattgaggcag 509 Query: 181 ctaaggactggag 193 ||||||| ||||| Sbjct: 510 ctaaggaatggag 522
>gb|AY103605.1| Zea mays PCO117734 mRNA sequence Length = 1205 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||||||||| || ||||| || || || ||||||||||||||||||||||| ||||| | Sbjct: 509 atgtctatcctgatgggcgggtttgtatctctattcttcatccacctggtgaagatccaa 568 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | ||||||||||| |||||||| || ||||| || |||||||| || || || ||||||| Sbjct: 569 acggttatgagctcgcaagtgagcgatggacacctgtgcacacagtagaaagcatagttc 628 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 |||||||||| || ||||||||||||||||| || ||||| |||||||| ||||| || | Sbjct: 629 tgagcattatatcaatgctctctagtccaaatgatgagtctccagcaaacattgaggcag 688 Query: 181 ctaaggactggag 193 ||||||| ||||| Sbjct: 689 ctaaggaatggag 701
>gb|M74077.1|WHTUBICP T.aestivum ubiquitin carrier protein mRNA Length = 802 Score = 163 bits (82), Expect = 3e-37 Identities = 168/196 (85%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| ||||| || ||||| || ||||||||||||| ||||||||||||||||||| | Sbjct: 302 atgtttatccagatgggcgggtatgcatttctattc---atccacctggtgatgatccaa 358 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 | || |||||||| |||||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 359 acggatatgagctcgcaagtgagcgttggacaccagtccatacggttgagagtatagtat 418 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 | ||||| ||||||||||| ||||||||||| || || || || |||||||||||||| | Sbjct: 419 taagcatcatttcgatgctttctagtccaaatgatgaatcaccggcaaatattgaagcag 478 Query: 181 ctaaggactggagaga 196 |||||||||||||||| Sbjct: 479 ctaaggactggagaga 494
>ref|NM_114513.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G46460 mRNA, complete cds Length = 857 Score = 125 bits (63), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 408 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 467 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || ||||| ||||||||||| | |||| ||||| || ||||||||| |||| Sbjct: 468 acgcctgttcacacagttgagagtatcatgttgagtattatatcaatgctctctggtccc 527 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 528 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 574
>gb|AY094040.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 501 Score = 125 bits (63), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 271 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 330 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || ||||| ||||||||||| | |||| ||||| || ||||||||| |||| Sbjct: 331 acgcctgttcacacagttgagagtatcatgttgagtattatatcaatgctctctggtccc 390 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 391 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 437
>gb|AY050368.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 780 Score = 125 bits (63), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 408 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 467 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || ||||| ||||||||||| | |||| ||||| || ||||||||| |||| Sbjct: 468 acgcctgttcacacagttgagagtatcatgttgagtattatatcaatgctctctggtccc 527 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 528 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 574
>gb|DQ027027.1| Arabidopsis thaliana ubiquitinating enzyme (At3g46460) mRNA, complete cds Length = 501 Score = 125 bits (63), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 271 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 330 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || ||||| ||||||||||| | |||| ||||| || ||||||||| |||| Sbjct: 331 acgcctgttcacacagttgagagtatcatgttgagtattatatcaatgctctctggtccc 390 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 391 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 9e-25 Identities = 82/89 (92%) Strand = Plus / Minus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 36012407 cgtgtatgcatttctattcttcatccgcctggtgatgatcccaatggttatgagcttgcg 36012348 Query: 78 agtgaacggtggacgccagtgcacacggt 106 ||||| || ||||| |||||||| ||||| Sbjct: 36012347 agtgagcgttggacaccagtgcatacggt 36012319 Score = 85.7 bits (43), Expect = 5e-14 Identities = 67/75 (89%) Strand = Plus / Minus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 ||||||||| |||||||||||||| ||||||||||| ||| ||||||| || || || || Sbjct: 36011519 ggttgagagcatagttctgagcatcatttcgatgctttctggtccaaatgatgaatcacc 36011460 Query: 164 agcaaatattgaagc 178 ||||||||||||||| Sbjct: 36011459 agcaaatattgaagc 36011445
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 121 bits (61), Expect = 9e-25 Identities = 82/89 (92%) Strand = Plus / Minus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 25132 cgtgtatgcatttctattcttcatccgcctggtgatgatcccaatggttatgagcttgcg 25073 Query: 78 agtgaacggtggacgccagtgcacacggt 106 ||||| || ||||| |||||||| ||||| Sbjct: 25072 agtgagcgttggacaccagtgcatacggt 25044 Score = 85.7 bits (43), Expect = 5e-14 Identities = 67/75 (89%) Strand = Plus / Minus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 ||||||||| |||||||||||||| ||||||||||| ||| ||||||| || || || || Sbjct: 24244 ggttgagagcatagttctgagcatcatttcgatgctttctggtccaaatgatgaatcacc 24185 Query: 164 agcaaatattgaagc 178 ||||||||||||||| Sbjct: 24184 agcaaatattgaagc 24170
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 121 bits (61), Expect = 9e-25 Identities = 82/89 (92%) Strand = Plus / Minus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111085 cgtgtatgcatttctattcttcatccgcctggtgatgatcccaatggttatgagcttgcg 111026 Query: 78 agtgaacggtggacgccagtgcacacggt 106 ||||| || ||||| |||||||| ||||| Sbjct: 111025 agtgagcgttggacaccagtgcatacggt 110997 Score = 85.7 bits (43), Expect = 5e-14 Identities = 67/75 (89%) Strand = Plus / Minus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 ||||||||| |||||||||||||| ||||||||||| ||| ||||||| || || || || Sbjct: 110197 ggttgagagcatagttctgagcatcatttcgatgctttctggtccaaatgatgaatcacc 110138 Query: 164 agcaaatattgaagc 178 ||||||||||||||| Sbjct: 110137 agcaaatattgaagc 110123
>emb|BX842105.1|CNS09YES Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 117 bits (59), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||| | || ||| Sbjct: 391 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtcagcgttgg 450 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || ||||| ||||||||||| | |||| ||||| || ||||||||| |||| Sbjct: 451 acgcctgttcacacagttgagagtatcatgttgagtattatatcaatgctctctggtccc 510 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 511 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 557
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 109 bits (55), Expect = 3e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 |||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 63458 ggttgaaagtatagttctgagcatcatttcgatgctctctagtccaaatgatgagtctcc 63517 Query: 164 agcaaatattgaagc 178 ||||||||||||||| Sbjct: 63518 agcaaatattgaagc 63532 Score = 93.7 bits (47), Expect = 2e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 6 tatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggt 65 ||||| || ||||| || ||||||||||| |||||||||||||| || |||||||| ||| Sbjct: 62839 tatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatcccaacggt 62898 Query: 66 tatgagcttgcaagtgaacggtggacgccagtgca 100 ||||||||||| || ||||||||||| || ||||| Sbjct: 62899 tatgagcttgcgagcgaacggtggacacctgtgca 62933
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 3e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 |||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 22474051 ggttgaaagtatagttctgagcatcatttcgatgctctctagtccaaatgatgagtctcc 22474110 Query: 164 agcaaatattgaagc 178 ||||||||||||||| Sbjct: 22474111 agcaaatattgaagc 22474125 Score = 93.7 bits (47), Expect = 2e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 6 tatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggt 65 ||||| || ||||| || ||||||||||| |||||||||||||| || |||||||| ||| Sbjct: 22473432 tatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatcccaacggt 22473491 Query: 66 tatgagcttgcaagtgaacggtggacgccagtgca 100 ||||||||||| || ||||||||||| || ||||| Sbjct: 22473492 tatgagcttgcgagcgaacggtggacacctgtgca 22473526 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ttatgagcttgcaagtgaa 83 ||||||||||||||||||| Sbjct: 29081039 ttatgagcttgcaagtgaa 29081057
>ref|NM_125320.1| Arabidopsis thaliana UBC7; ubiquitin conjugating enzyme AT5G59300 (UBC7) mRNA, complete cds Length = 597 Score = 95.6 bits (48), Expect = 5e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 355 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 414 Query: 78 agtgaacggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatg 137 || || || ||||| || || || || ||||||||||| | |||| || || || ||| Sbjct: 415 agcgagcgttggactcctgttcatacagttgagagtattatgttgagtatcatatcaatg 474 Query: 138 ctctctagtccaaacgacgagtcgccagcaaatattgaagctgc 181 || ||| |||| ||||| ||||| ||||||||| |||||||||| Sbjct: 475 ctttctggtcctaacgatgagtctccagcaaatgttgaagctgc 518
>gb|AY080733.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, partial cds Length = 852 Score = 95.6 bits (48), Expect = 5e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 323 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 382 Query: 78 agtgaacggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatg 137 || || || ||||| || || || || ||||||||||| | |||| || || || ||| Sbjct: 383 agcgagcgttggactcctgttcatacagttgagagtattatgttgagtatcatatcaatg 442 Query: 138 ctctctagtccaaacgacgagtcgccagcaaatattgaagctgc 181 || ||| |||| ||||| ||||| ||||||||| |||||||||| Sbjct: 443 ctttctggtcctaacgatgagtctccagcaaatgttgaagctgc 486
>gb|AF462205.1| Narcissus pseudonarcissus putative ubiquitin conjugating enzyme mRNA, partial cds Length = 498 Score = 95.6 bits (48), Expect = 5e-17 Identities = 159/196 (81%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatccca 60 |||| |||||||| |||||||| ||||| || || || || ||||||| |||||||| | Sbjct: 35 atgtgtatcccgatgggcgtgtttgcatctcaatcctgcacgcacctggagatgatccaa 94 Query: 61 atggttatgagcttgcaagtgaacggtggacgccagtgcacacggttgagagtatagttc 120 ||| ||||| |||||||||||||| ||||| || ||||| ||||||||||| || || Sbjct: 95 gtggctatgaacttgcaagtgaacgttggacacctgtgcatacggttgagagcattcttt 154 Query: 121 tgagcattatttcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctg 180 |||| ||||| || ||||| || ||||| || || || || || |||||||||||||| | Sbjct: 155 tgagtattatatccatgctttccagtcccaatgatgaatctcctgcaaatattgaagccg 214 Query: 181 ctaaggactggagaga 196 | || || |||||||| Sbjct: 215 ccaaagaatggagaga 230
>emb|BX833817.1|CNS0A23A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 740 Score = 95.6 bits (48), Expect = 5e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 281 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 340 Query: 78 agtgaacggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatg 137 || || || ||||| || || || || ||||||||||| | |||| || || || ||| Sbjct: 341 agcgagcgttggactcctgttcatacagttgagagtattatgttgagtatcatatcaatg 400 Query: 138 ctctctagtccaaacgacgagtcgccagcaaatattgaagctgc 181 || ||| |||| ||||| ||||| ||||||||| |||||||||| Sbjct: 401 ctttctggtcctaacgatgagtctccagcaaatgttgaagctgc 444
>gb|BT005798.1| Arabidopsis thaliana clone C105469 putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, complete cds Length = 643 Score = 95.6 bits (48), Expect = 5e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 370 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 429 Query: 78 agtgaacggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatg 137 || || || ||||| || || || || ||||||||||| | |||| || || || ||| Sbjct: 430 agcgagcgttggactcctgttcatacagttgagagtattatgttgagtatcatatcaatg 489 Query: 138 ctctctagtccaaacgacgagtcgccagcaaatattgaagctgc 181 || ||| |||| ||||| ||||| ||||||||| |||||||||| Sbjct: 490 ctttctggtcctaacgatgagtctccagcaaatgttgaagctgc 533
>emb|BX825758.1|CNS0A66U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 799 Score = 93.7 bits (47), Expect = 2e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||| ||| || ||| Sbjct: 396 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaaatgagcgttgg 455 Query: 90 acgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctctagtcca 149 ||||| || | || ||||||||||| | |||| ||||| || ||||| ||| |||| Sbjct: 456 acgcctgttaaaacagttgagagtatcatgttgagtattatatcaatgctttctggtccc 515 Query: 150 aacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||||||| || |||||||| |||| |||||||| || |||||||| Sbjct: 516 aacgacgaatctccagcaaacgttgaggctgctaaagaatggagaga 562
>ref|NM_115396.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G55380 mRNA, complete cds Length = 883 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 369 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 428 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 429 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 488 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 489 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 541
>gb|AY117262.1| Arabidopsis thaliana putative E2 ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 535 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 268 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 327 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 328 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 387 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 388 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 440
>emb|X72625.1|ATUCEE2A A.thaliana UbcAT3 mRNA for ubiquitin conjugating enzyme E2 Length = 887 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 363 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 422 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 423 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 482 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 483 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 535
>gb|AY045883.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 898 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 377 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 436 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 437 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 496 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 497 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 549
>emb|BX825254.1|CNS0A53C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 842 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 348 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 407 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 408 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 467 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 468 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 520
>gb|AY086490.1| Arabidopsis thaliana clone 25382 mRNA, complete sequence Length = 785 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 293 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 352 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 353 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 412 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 413 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 465
>gb|DQ027028.1| Arabidopsis thaliana ubiquitinating enzyme (At3g55380) mRNA, complete cds Length = 504 Score = 89.7 bits (45), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 |||||||||||||||||||| |||||||||||||| |||| || |||||||| |||| Sbjct: 268 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgcctctgaa 327 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||||| || || || ||||| || || || || |||| || || ||||||||||| Sbjct: 328 cgttggacccctgtccatacggtagaaagcattgtgttgagtatcatatcgatgctctca 387 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagaga 196 |||| ||||| ||||| ||||| ||| | |||||||| ||||| |||||||| Sbjct: 388 ggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatggagaga 440
>emb|BX833254.1|CNS0A238 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 87.7 bits (44), Expect = 1e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 321 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 380 Query: 78 agtgaacggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatg 137 || || || || || || || || || ||||||||||| | |||| || || || ||| Sbjct: 381 agcgagcgttgaactcctgttcatacagttgagagtattatgttgagtatcatatcaatg 440 Query: 138 ctctctagtccaaacgacgagtcgccagcaaatattgaagctgc 181 || ||| |||| ||||| ||||| ||||||||| |||||||||| Sbjct: 441 ctttctggtcctaacgatgagtctccagcaaatgttgaagctgc 484
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 75.8 bits (38), Expect = 5e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 82775 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 82716 Query: 90 acgccagtgcacac 103 ||||| || ||||| Sbjct: 82715 acgcctgttcacac 82702
>gb|U33758.1|ATU33758 Arabidopsis ubiquitin conjugating enzyme E2 (UBC13) gene, complete cds Length = 2209 Score = 75.8 bits (38), Expect = 5e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 30 tctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaacggtgg 89 |||||||| ||||| |||||||||||||| | ||| ||||||||||||||||| || ||| Sbjct: 1080 tctattctacatcctcctggtgatgatccaagtggatatgagcttgcaagtgagcgttgg 1139 Query: 90 acgccagtgcacac 103 ||||| || ||||| Sbjct: 1140 acgcctgttcacac 1153 Score = 46.1 bits (23), Expect = 0.040 Identities = 65/79 (82%) Strand = Plus / Plus Query: 104 ggttgagagtatagttctgagcattatttcgatgctctctagtccaaacgacgagtcgcc 163 |||||||||||| | |||| ||||| || ||||||||| |||| |||||||| || || Sbjct: 1269 ggttgagagtatcatgttgagtattatatcaatgctctctggtcccaacgacgaatctcc 1328 Query: 164 agcaaatattgaagctgct 182 |||||| |||| |||||| Sbjct: 1329 agcaaacgttgaggctgct 1347
>dbj|AK102646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100I12, full insert sequence Length = 2666 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagagaaa 198 |||||||| || ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 2250 agtccaaatgatgagtctccagcaaatattgaagcggctaaggattggagagaaa 2304
>gb|DQ284455.1| Solanum tuberosum clone 007A03 putative E2 ubiquitin-conjugating protein UBC7-like mRNA, complete cds Length = 783 Score = 69.9 bits (35), Expect = 3e-09 Identities = 140/175 (80%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 ||||| || |||||||| ||||||||||||||||| ||||| |||||| ||| ||||| Sbjct: 332 tgcatctcaattcttcacccacctggtgatgatccaaatggctatgagtatgctagtgag 391 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||| | || || |||||||| ||||||||| || | ||||| || || ||||| || Sbjct: 392 cgttggtctcctgtccacacggtggagagtataattttaagcatcatatccatgctttca 451 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagagaaa 198 || || || || ||||| || || || | |||||||||||||| ||||| |||| Sbjct: 452 agccctaatgatgagtctcctgctaacgtggaagctgctaaggaatggagggaaa 506
>ref|XM_824383.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme E2 (Tb11.01.5790) partial mRNA Length = 744 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacc 46 |||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 227 atgtttatcccgatggtcgtgtgtgcatttctattcttcatccacc 272
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 59631 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 59572 Query: 78 ag 79 || Sbjct: 59571 ag 59570
>gb|U33757.1|ATU33757 Arabidopsis thaliana ubiquitin conjugating enzyme E2 (UBC7) gene, complete cds Length = 2705 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 18 cgtgtgtgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgca 77 ||||| ||||| |||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 1503 cgtgtttgcatatctattcttcatcctcccggtgatgatcctagcggttatgagcttgca 1562 Query: 78 ag 79 || Sbjct: 1563 ag 1564
>gb|U33759.1|ATU33759 Arabidopsis ubiquitin conjugating enzyme E2 (UBC14) gene, complete cds Length = 2107 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgc 76 |||||||||||||||||||| |||||||||||||| |||| || |||||||| Sbjct: 1034 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgc 1086 Score = 50.1 bits (25), Expect = 0.003 Identities = 55/65 (84%) Strand = Plus / Plus Query: 132 tcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctgctaaggactgg 191 ||||||||||| |||| ||||| ||||| ||||| ||| | |||||||| ||||| ||| Sbjct: 1560 tcgatgctctcaggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatgg 1619 Query: 192 agaga 196 ||||| Sbjct: 1620 agaga 1624
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgc 76 |||||||||||||||||||| |||||||||||||| |||| || |||||||| Sbjct: 14715 tgcatttctattcttcatcctcctggtgatgatcctcatggatacgagcttgc 14767 Score = 50.1 bits (25), Expect = 0.003 Identities = 55/65 (84%) Strand = Plus / Plus Query: 132 tcgatgctctctagtccaaacgacgagtcgccagcaaatattgaagctgctaaggactgg 191 ||||||||||| |||| ||||| ||||| ||||| ||| | |||||||| ||||| ||| Sbjct: 15241 tcgatgctctcaggtcccaacgatgagtcaccagcgaatgtggaagctgcaaaggaatgg 15300 Query: 192 agaga 196 ||||| Sbjct: 15301 agaga 15305
>gb|DQ284482.1| Solanum tuberosum clone 178D03 ubiquitin-conjugating protein 13-like mRNA, complete cds Length = 820 Score = 61.9 bits (31), Expect = 7e-07 Identities = 139/175 (79%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 ||||| || |||||||| || |||||||||||||| ||||| |||||| ||| ||||| Sbjct: 350 tgcatctcaattcttcaccctcctggtgatgatccaaatggctatgagtatgctagtgag 409 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||| | || || |||||||| ||||||||| || | ||||| || || ||||| || Sbjct: 410 cgttggtctcctgtccacacggtggagagtataattttaagcatcatatccatgctttca 469 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagagaaa 198 || || || || ||||| || || || | |||||||||||||| ||||| |||| Sbjct: 470 agccctaatgatgagtctcctgctaacgtggaagctgctaaggaatggagggaaa 524
>gb|DQ252513.1| Solanum tuberosum clone 089D04 ubiquitin-conjugating enzyme E2 7-like mRNA, complete cds Length = 807 Score = 61.9 bits (31), Expect = 7e-07 Identities = 139/175 (79%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctggtgatgatcccaatggttatgagcttgcaagtgaa 83 ||||| || |||||||| || |||||||||||||| ||||| |||||| ||| ||||| Sbjct: 352 tgcatctcaattcttcaccctcctggtgatgatccaaatggctatgagtatgctagtgag 411 Query: 84 cggtggacgccagtgcacacggttgagagtatagttctgagcattatttcgatgctctct 143 || ||| | || || |||||||| ||||||||| || | ||||| || || ||||| || Sbjct: 412 cgttggtctcctgtccacacggtggagagtataattttaagcatcatatccatgctttca 471 Query: 144 agtccaaacgacgagtcgccagcaaatattgaagctgctaaggactggagagaaa 198 || || || || ||||| || || || | |||||||||||||| ||||| |||| Sbjct: 472 agccctaatgatgagtctcctgctaacgtggaagctgctaaggaatggagggaaa 526
>ref|XM_640423.1| Dictyostelium discoideum hypothetical protein (DDB0168503), partial mRNA Length = 516 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 147 ccaaacgacgagtcgccagcaaatattgaagctgctaa 184 |||||||||||||| ||||||||||| || |||||||| Sbjct: 406 ccaaacgacgagtcaccagcaaatatcgatgctgctaa 443
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 147 ccaaacgacgagtcgccagcaaatattgaagctgctaa 184 |||||||||||||| ||||||||||| || |||||||| Sbjct: 158291 ccaaacgacgagtcaccagcaaatatcgatgctgctaa 158328
>ref|XM_511281.1| PREDICTED: Pan troglodytes similar to ankyrin repeat and FYVE domain containing 1 isoform 1; ankyrin repeat hooked to zinc finger motif (LOC454444), mRNA Length = 1582 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 429 tgtgtgcatttctattcttcat 450
>ref|NM_003342.4| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) (UBE2G1), transcript variant 1, mRNA Length = 4208 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 622 tgtgtgcatttctattcttcat 643
>ref|XM_742845.1| Aspergillus fumigatus Af293 ubiquitin conjugating enzyme UbcH (Afu5g04060) partial mRNA Length = 501 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 atgtctatcccgacgggcgtgtgtgcatttctattcttcatccacctggtgatgatcc 58 ||||||||||| |||| ||| ||||| || ||||||||||| || ||||||||||| Sbjct: 245 atgtctatcccaacggaactgtctgcatatccattcttcatcctcccggtgatgatcc 302
>gb|BC026288.1| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 1, mRNA (cDNA clone MGC:23926 IMAGE:4806647), complete cds Length = 2430 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 430 tgtgtgcatttctattcttcat 451
>gb|BT008255.1| Synthetic construct Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|BT007416.1| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence Length = 168834 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 30478 tgtgtgcatttctattcttcat 30499
>emb|CR623407.1| full-length cDNA clone CS0DC020YA09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1927 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 570 tgtgtgcatttctattcttcat 591
>emb|CR622319.1| full-length cDNA clone CS0DC006YD05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1734 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 362 tgtgtgcatttctattcttcat 383
>dbj|AB169404.1| Macaca fascicularis testis cDNA, clone: QtsA-19729, similar to human ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C.elegans) (UBE2G1), transcript variant 1, mRNA, RefSeq: NM_003342.3 Length = 1888 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 453 tgtgtgcatttctattcttcat 474
>gb|AY892103.1| Synthetic construct Homo sapiens clone FLH026045.01L ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|AY892102.1| Synthetic construct Homo sapiens clone FLH026044.01L ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|AY889645.1| Synthetic construct Homo sapiens clone FLH026049.01X ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|AY889644.1| Synthetic construct Homo sapiens clone FLH026048.01X ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 264 tgtgtgcatttctattcttcat 285
>gb|AY610214.1| Sus scrofa clone Clu_9846.scr.msk.p1.Contig3, mRNA sequence Length = 1984 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 588 tgtgtgcatttctattcttcat 609
>gb|BC002775.2| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast), transcript variant 1, mRNA (cDNA clone MGC:3733 IMAGE:3619626), complete cds Length = 1318 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 521 tgtgtgcatttctattcttcat 542
>dbj|D78514.1| Homo sapiens mRNA for ubiquitin-conjugating enzyme, complete cds Length = 617 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcat 41 |||||||||||||||||||||| Sbjct: 282 tgtgtgcatttctattcttcat 303
>ref|XM_424727.1| PREDICTED: Gallus gallus similar to ubiquitin-conjugating enzyme E2-32k (LOC427134), mRNA Length = 880 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcatccacctg 48 |||||| ||||| |||||||||||||||| Sbjct: 108 tgtgtgtatttccattcttcatccacctg 136
>ref|XM_618072.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 1 (LOC537885), mRNA Length = 1269 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctg 48 |||||||| |||||||||||||||| Sbjct: 102 tgcatttcaattcttcatccacctg 126
>ref|XM_872923.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 3 (LOC537885), mRNA Length = 1126 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctg 48 |||||||| |||||||||||||||| Sbjct: 94 tgcatttcaattcttcatccacctg 118
>ref|XM_843428.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2R 2 (LOC612749), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 tgcatttctattcttcatccacctg 48 |||||||| |||||||||||||||| Sbjct: 286 tgcatttcgattcttcatccacctg 310
>emb|BX931937.2| Gallus gallus finished cDNA, clone ChEST551o16 Length = 1085 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcatccacctg 48 |||||| ||||| |||||||||||||||| Sbjct: 309 tgtgtgtatttccattcttcatccacctg 337
>emb|BX950383.1| Gallus gallus finished cDNA, clone ChEST146n3 Length = 1535 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcatccacctg 48 |||||| ||||| |||||||||||||||| Sbjct: 286 tgtgtgtatttccattcttcatccacctg 314
>emb|BX933891.1| Gallus gallus finished cDNA, clone ChEST129g2 Length = 1558 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattcttcatccacctg 48 |||||| ||||| |||||||||||||||| Sbjct: 309 tgtgtgtatttccattcttcatccacctg 337
>emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chromosome 9 Contains a CpG island, complete sequence Length = 162837 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgctaaggactggagagaaa 198 |||||||||||||||||||| Sbjct: 7517 tgctaaggactggagagaaa 7498
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gtgtgtgcatttctattctt 38 |||||||||||||||||||| Sbjct: 195502 gtgtgtgcatttctattctt 195521
>gb|BC041871.1| Homo sapiens cDNA clone IMAGE:5271825 Length = 1932 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tgctaaggactggagagaaa 198 |||||||||||||||||||| Sbjct: 1390 tgctaaggactggagagaaa 1409
>ref|XM_625154.1| PREDICTED: Apis mellifera similar to ENSANGP00000019471 (LOC552779), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cacctggtgatgatcccaatggttatga 70 |||||||||||||||||| |||||||| Sbjct: 520 cacctggtgatgatcccatgggttatga 547
>emb|AL442639.2|HS5P15 Homo sapiens chromosome 9 BAC RP11-5P15, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgctaaggactggagagaaa 198 |||||||||||||||||||| Sbjct: 116709 tgctaaggactggagagaaa 116690
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ttatgagcttgcaagtgaa 83 ||||||||||||||||||| Sbjct: 91094 ttatgagcttgcaagtgaa 91112
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ttatgagcttgcaagtgaa 83 ||||||||||||||||||| Sbjct: 7263 ttatgagcttgcaagtgaa 7281
>ref|XM_845587.1| PREDICTED: Canis familiaris similar to nucleoporin 214kDa (LOC608534), mRNA Length = 3720 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 acctggtgatgatcccaat 62 ||||||||||||||||||| Sbjct: 447 acctggtgatgatcccaat 465
>emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chromosome 1 Contains two novel genes, a protein-kinase interferon-inducible double stranded RNA dependent inhibitor repressor of (P58 repressor) (PRKRIR) pseudogene, a riboflavin kinase (RFK) pseudogene and the 3' end of the RGS7 gene for regulator of G-protein signalling 7, complete sequence Length = 173634 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 ttctattcttcatccacct 47 ||||||||||||||||||| Sbjct: 89192 ttctattcttcatccacct 89174
>gb|AC108105.2| Homo sapiens chromosome 5 clone RP11-209B12, complete sequence Length = 162993 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 catttctattcttcatcca 44 ||||||||||||||||||| Sbjct: 845 catttctattcttcatcca 863
>gb|AC093277.3| Homo sapiens chromosome 5 clone RP11-386E5, complete sequence Length = 58894 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 catttctattcttcatcca 44 ||||||||||||||||||| Sbjct: 34566 catttctattcttcatcca 34584
>gb|AC105031.5| Homo sapiens chromosome 8, clone CTD-2272D18, complete sequence Length = 111327 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attgaagctgctaaggact 189 ||||||||||||||||||| Sbjct: 56454 attgaagctgctaaggact 56436
>dbj|AK048831.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230073L03 product:weakly similar to X-LIKE 1 PROTEIN [Homo sapiens], full insert sequence Length = 1566 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattctt 38 ||||||||||||||||||| Sbjct: 1177 tgtgtgcatttctattctt 1195
>gb|DQ306234.1| Takifugu rubripes odorant receptor (OR4208-2) gene, complete cds Length = 762 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 tcttcatccacctggtgat 53 ||||||||||||||||||| Sbjct: 29 tcttcatccacctggtgat 47
>gb|DQ306233.1| Takifugu rubripes odorant receptor (OR4208-1) gene, partial cds Length = 774 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 tcttcatccacctggtgat 53 ||||||||||||||||||| Sbjct: 29 tcttcatccacctggtgat 47
>gb|DQ306149.1| Tetraodon nigroviridis odorant receptor (OR10960-3) gene, complete cds Length = 912 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 tcttcatccacctggtgat 53 ||||||||||||||||||| Sbjct: 179 tcttcatccacctggtgat 197
>emb|CT010507.11| Mouse DNA sequence from clone RP23-259G10 on chromosome 9, complete sequence Length = 213433 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 tgtgtgcatttctattctt 38 ||||||||||||||||||| Sbjct: 129900 tgtgtgcatttctattctt 129918
>gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, complete sequence Length = 174202 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 57 cccaatggttatgagcttgcaagtgaa 83 ||||||||||| |||||||||||||| Sbjct: 86270 cccaatggttaacagcttgcaagtgaa 86244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,396,110 Number of Sequences: 3902068 Number of extensions: 1396110 Number of successful extensions: 88560 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88371 Number of HSP's gapped (non-prelim): 178 length of query: 198 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 176 effective length of database: 17,147,199,772 effective search space: 3017907159872 effective search space used: 3017907159872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)