ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4f10 |
|---|---|
| Clone Library Name | barley_pub |
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 95.5 bits (236), Expect = 6e-20 Identities = 53/154 (34%), Positives = 81/154 (52%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++HA GW S + PAF G AP L Q RWA G +EIL+SR+ PI Sbjct: 780 DILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWY 839 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 RL+L + + Y+ +P+ + + Y +L FCL+T++ +P S+ + LF Sbjct: 840 GYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLF 899 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 +S + ++E + G+S WW N + I S Sbjct: 900 ISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTS 933
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 92.4 bits (228), Expect = 5e-19 Identities = 54/154 (35%), Positives = 78/154 (50%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++HA GW S + PAF G AP L Q RWA G +EIL+SR+ PI Sbjct: 767 DILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWY 826 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 RL+L + + Y+ +P+ + L Y +L FCL+TN +P S+ + LF Sbjct: 827 GYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLF 886 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 S + ++E K ++ WW N + I S Sbjct: 887 ASIYASAILELKWSDVALEDWWRNEQFWVIGGTS 920
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 88.6 bits (218), Expect = 7e-18 Identities = 54/154 (35%), Positives = 74/154 (48%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++HA GW+S PAF G AP L Q RWA G +EIL SR+ PI Sbjct: 765 DILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWY 824 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 RL+ + Y+ +P+ + L Y L CL TNQ +P S+ ++LF Sbjct: 825 GYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLF 884 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 LS ++E + G+ WW N + I S Sbjct: 885 LSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVS 918
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 84.7 bits (208), Expect = 1e-16 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPI-L 178 DILTG ++H GW+S PAF G AP L Q RWA G +EI SR+SP+ Sbjct: 726 DILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWY 785 Query: 179 GTIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVAL 358 G +L+ + Y +P + L Y +L CLLT++ +P S ++L Sbjct: 786 GYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISL 845 Query: 359 FLSYHIYHLMEYKECGLSARAWWNNHR 439 F+S + ++E + G+S WW N + Sbjct: 846 FMSIIVTGILELRWSGVSIEEWWRNEQ 872
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 84.3 bits (207), Expect = 1e-16 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 1/155 (0%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPI-L 178 DILTG ++H GW+S PAF G AP L Q RWA G +EI +SR+ P+ Sbjct: 683 DILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWY 742 Query: 179 GTIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVAL 358 G RL+L Q L Y+ +P + + Y L CLLT + +PT S+ + + L Sbjct: 743 GCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGL 802 Query: 359 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 F+S + ++E + G+S W N + I S Sbjct: 803 FISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVS 837
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 82.4 bits (202), Expect = 5e-16 Identities = 52/154 (33%), Positives = 74/154 (48%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG R+H GWKS PAF G AP L Q RWA G +EI SR+ P+ Sbjct: 748 DILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWY 807 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 +L++ + L Y+ +P + L Y + CLLT + +PT ++ +ALF Sbjct: 808 AWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALF 867 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 LS ++E + G+S W N + I S Sbjct: 868 LSIIATAILELRWSGVSINDLWRNEQFWVIGGVS 901
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 76.3 bits (186), Expect = 4e-14 Identities = 50/154 (32%), Positives = 73/154 (47%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++H+ GW+S PAF G AP L Q RWA G +EI +SR+ PI Sbjct: 770 DILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWY 829 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 L+ + L Y+ +P + L Y L CLLT + +P S+ + +ALF Sbjct: 830 GYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALF 889 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 S + ++E + + WW N + I S Sbjct: 890 GSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVS 923
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 73.6 bits (179), Expect = 2e-13 Identities = 49/154 (31%), Positives = 72/154 (46%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++H+ GW+S AF G AP L Q RWA G +EI +SR+ PI Sbjct: 785 DILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWY 844 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 L+ + L Y+ +P + + Y L CLLT + +P S+ + +ALF Sbjct: 845 GYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALF 904 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 S I ++E + + WW N + I S Sbjct: 905 SSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVS 938
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 73.6 bits (179), Expect = 2e-13 Identities = 47/154 (30%), Positives = 72/154 (46%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++H GW+S AF G AP L Q RWA G +EI +SR+ PI Sbjct: 784 DILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWY 843 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 L+ + Y+ +P + + Y L CLLT + +P S+ + + +F Sbjct: 844 GYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMF 903 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 +S + ++E + G+ WW N + I AS Sbjct: 904 ISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGAS 937
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 70.5 bits (171), Expect = 2e-12 Identities = 46/154 (29%), Positives = 70/154 (45%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTNPPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSPILG 181 DILTG ++H GW+S AF G AP L Q RWA G +EI +SR+ PI Sbjct: 788 DILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWY 847 Query: 182 TIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALF 361 L+ + Y+ +P + L Y L CLLT + +P S+ + + +F Sbjct: 848 GYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMF 907 Query: 362 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS 463 +S + ++E + + WW N + I S Sbjct: 908 MSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVS 941
>CKR1_CHICK (P30373) Zinc finger protein CKR1| Length = 509 Score = 35.0 bits (79), Expect = 0.095 Identities = 24/74 (32%), Positives = 34/74 (45%) Frame = +1 Query: 79 GMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMPWLSHRRGVAREGAF 258 G+C +R + + +Q G TH+PE+PY A P+L+HRRG A +F Sbjct: 334 GLCGERFSQKAHLLQH------GKTHRPERPYKCGDCGKRFENAPPFLAHRRGHAALKSF 387 Query: 259 RAVLCTIGTFLPSH 300 C G SH Sbjct: 388 TCGDCGKGFAWASH 401
>XFP_BIFAN (Q9AEM9) Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase| (EC 4.1.2.9) (EC 4.1.2.22) Length = 825 Score = 32.0 bits (71), Expect = 0.81 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 122 KRWATGVLEILISRNSPILGTIFQRLQLRQCLGYL 226 K+W G L L+ N + G + ++L QC G+L Sbjct: 452 KQWDNGYLSALVDENMAVTGQVVEQLSEHQCEGFL 486
>ALX4_HUMAN (Q9H161) Homeobox protein aristaless-like 4| Length = 411 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Frame = +1 Query: 97 GTGQLD---PVQE-MGNRGSGDTHQPE----------QPYPRHHLPTPPTPAMPWLSHRR 234 G GQ D P++ G RGS + QP+ QP P+ P P PA P L +R Sbjct: 67 GAGQQDLATPLESGAGARGSFNKFQPQPSTPQPQPSPQPQPQQQQPQPQPPAQPHLYLQR 126 Query: 235 GVAR 246 G + Sbjct: 127 GACK 130
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 121 QEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMP 216 Q G+ GS ++ P P+P H P PP P P Sbjct: 25 QHSGSAGSSASYHPHHPHP--HAPPPPPPPPP 54
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 157 QPEQPYPRHHLPTPPTPAMP 216 QP+QP P P PPTPA P Sbjct: 436 QPQQPTPAKPQPQPPTPAKP 455
>SACB_ERWAM (Q46654) Levansucrase (EC 2.4.1.10) (Beta-D-fructofuranosyl| transferase) (Sucrose 6-fructosyl transferase) Length = 415 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +1 Query: 64 PTGILGMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLP----TPPTPAMPW 219 P G+ G SD+ TG P+ G + QP Q Y + +P T ++PW Sbjct: 316 PDGVYGFVSDKLTGPYTPMNSSGLVLGNPSSQPFQTYSHYVMPNGLVTSFIDSVPW 371
>PIVA2_ADE05 (P03271) Maturation protein (Protein IVA2)| Length = 449 Score = 30.4 bits (67), Expect = 2.3 Identities = 31/123 (25%), Positives = 49/123 (39%) Frame = +2 Query: 86 APTGGPASLTQFKRWATGVLEILISRNSPILGTIFQRLQLRQCLGYLIVEAWPVRAPFEL 265 +P P+ L +F T L + IS +L IF+ R C ++I P + Sbjct: 345 SPRMHPSQLNRFVNTYTKGLPLAISL---LLKDIFRHHAQRSCYDWIIYNTTPQHEALQW 401 Query: 266 CYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQ 445 CY L P +G +P+ L + H+YH++E L+ R W+ Sbjct: 402 CY--LHP--------------RDGL-MPMYLNIQSHLYHVLEKIHRTLNDRDRWSRAYRA 444 Query: 446 RIT 454 R T Sbjct: 445 RKT 447
>PIVA2_ADE02 (P03272) Maturation protein (Protein IVA2)| Length = 449 Score = 30.4 bits (67), Expect = 2.3 Identities = 31/123 (25%), Positives = 49/123 (39%) Frame = +2 Query: 86 APTGGPASLTQFKRWATGVLEILISRNSPILGTIFQRLQLRQCLGYLIVEAWPVRAPFEL 265 +P P+ L +F T L + IS +L IF+ R C ++I P + Sbjct: 345 SPRMHPSQLNRFVNTYTKGLPLAISL---LLKDIFRHHAQRSCYDWIIYNTTPQHEALQW 401 Query: 266 CYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQ 445 CY L P +G +P+ L + H+YH++E L+ R W+ Sbjct: 402 CY--LHP--------------RDGL-MPMYLNIQSHLYHVLEKIHRTLNDRDRWSRAYRA 444 Query: 446 RIT 454 R T Sbjct: 445 RKT 447
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 11/64 (17%) Frame = +1 Query: 79 GMCSDRGT-GQLDPVQEMGNRG----------SGDTHQPEQPYPRHHLPTPPTPAMPWLS 225 G D+G GQ+ P+ E G+RG G QP QP P+ TP P L Sbjct: 948 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLP 1007 Query: 226 HRRG 237 +G Sbjct: 1008 GPKG 1011
>ATOH1_HUMAN (Q92858) Atonal protein homolog 1 (Helix-loop-helix protein hATH-1)| Length = 354 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 145 GDTHQPEQPYPRHHLPTPPTPAMP 216 GD H+ QP HHLP PP P P Sbjct: 17 GDHHRQPQP---HHLPQPPPPPQP 37
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 145 GDTHQPEQPYPRHHLPTPPT 204 G H+PE+P P+ H PTPPT Sbjct: 55 GHGHKPEKP-PKEHKPTPPT 73
>KI67_HUMAN (P46013) Antigen KI-67| Length = 3256 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = -3 Query: 256 RRPHGPRLDDEIAKALPELEALED---GAEDRAVPADEYLQNPCCPSLELGQAGRSPGRS 86 RRP PR E A+A+ +L +D G + ++ D+ + PC S EL S R Sbjct: 2785 RRPRAPR---ESAQAIEDLAGFKDPAAGHTEESMTDDKTTKIPCKSSPELEDTATSSKRR 2841 Query: 85 TSQECRWVGVQQGRFPTRRMDPLSGQ 8 + V V++ ++ SG+ Sbjct: 2842 PRTRAQKVEVKEELLAVGKLTQTSGE 2867
>KCNN3_PIG (P58392) Small conductance calcium-activated potassium channel| protein 3 (SK3) Length = 724 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = +1 Query: 79 GMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPP-TPAMP 216 G D G G LD + SGD Q +QP P P PP P P Sbjct: 5 GHFHDSGVGDLDEDPKCPCPSSGDEQQQQQPPPPPPPPAPPAAPQQP 51
>KCNN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium channel| protein 3 (SK3) (SKCa3) Length = 736 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = +1 Query: 79 GMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTP 207 G D G G LD + SGD Q +Q + P PP P Sbjct: 5 GHFHDSGVGDLDEDPKCPCPSSGDEQQQQQQQQQQQQPPPPAP 47
>ATOH1_PANTR (Q5IS79) Atonal protein homolog 1| Length = 356 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 145 GDTHQPEQPYPRHHLPTPPTPAMP 216 GD H+ QP HHLP PP P P Sbjct: 17 GDHHRQPQP---HHLPQPPPPPPP 37
>ANLN_XENLA (Q801E2) Actin-binding protein anillin| Length = 1116 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1 Query: 133 NRGSGDTHQPEQPYPRHHLPTPPTPAMPWLSHRRGVAREGAFRAVLCTIGTF 288 N S + P P+ + +PP P +P + + V R G F + TIG++ Sbjct: 151 NNVSPSSSPPAHVPPKDIIVSPPKPQIPDVGNDTPVGRRGRFANLAATIGSW 202
>FURIN_BOVIN (Q28193) Furin precursor (EC 3.4.21.75) (Paired basic amino acid| residue-cleaving enzyme) (PACE) (Dibasic-processing enzyme) (Trans Golgi network protease furin) Length = 797 Score = 29.6 bits (65), Expect = 4.0 Identities = 31/98 (31%), Positives = 38/98 (38%) Frame = +1 Query: 25 PCGGLEIGLVGHQPTGILGMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPT 204 PC G PT L S LDPV++ +R S + + Q P P PP Sbjct: 643 PCHASCATCQGPAPTDCLSCPSH---ASLDPVEQTCSRQSQSSRESHQQQP----PPPPR 695 Query: 205 PAMPWLSHRRGVAREGAFRAVLCTIGTFLPSHKPVLLA 318 P VA E RA L LPSH P ++A Sbjct: 696 PP------PAEVATEPRLRADL------LPSHLPEVVA 721
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 160 PEQPYPRH---HLPTPPTPAMPWLSHRRGVAREGAFR 261 P++P P +PTPP+ +P RR + RE FR Sbjct: 208 PQEPVPVSSPPRVPTPPSTPVPLPEKRRSILREPTFR 244
>RUMB_SHEON (Q8EI67) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)| (23S rRNA(M-5-U747)-methyltransferase) Length = 382 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +2 Query: 188 FQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFLP--TASDEGFR 343 F+R Q + C + + A + LL PF + TN FLP D GFR Sbjct: 6 FERGQCQSCRHIKLPMVQQLAAKTQELQQLLAPFVVSTNTQFLPPVVGEDSGFR 59
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = +1 Query: 16 TTDPCGGLEIGLVGHQPTGILGMCSDRGTGQLDPVQEMGN-RGSGDTHQ---PEQPYPRH 183 T GG+E+G VG P G +C P + + N RG T Q P Q Y Sbjct: 951 TWQESGGVELGRVGPAPPGAASICR--------PTRSVPNSRGDYMTMQIGCPRQSY--- 999 Query: 184 HLPTPPTPAMPWLSHRRGVARE 249 + T P + + R G+A E Sbjct: 1000 -VDTSPVAPVSYADMRTGIAAE 1020
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +1 Query: 46 GLVGHQPTGILGMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAM 213 G GH P + GM G Q+ P Q+ + G + P+ HH P P P M Sbjct: 549 GPPGHGPGPMPGM----GMNQMLPPQQPSHLGPPHPNMMNHPHHPHHHPGGPPPHM 600
>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor| Length = 648 Score = 29.3 bits (64), Expect = 5.2 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 4/109 (3%) Frame = +1 Query: 1 GHFDRTTDPCGGLEIGLVGHQPTGILGMCSDRGTGQLDPVQEMG-NRGSGDTHQPE---Q 168 GH+ + G G GH PT + + + TGQ Q+ G + +G QPE Q Sbjct: 353 GHYPASLQQPGQ---GQQGHYPTSLQQLGQGQQTGQPGQKQQPGQGQQTGQGQQPEQEQQ 409 Query: 169 PYPRHHLPTPPTPAMPWLSHRRGVAREGAFRAVLCTIGTFLPSHKPVLL 315 P P + P ++G ++G + L G H P L Sbjct: 410 PGQGQQGYYPTSLQQPGQGQQQGQGQQGYYPTSLQQPGQGQQGHYPASL 458
>SATB1_MOUSE (Q60611) DNA-binding protein SATB1 (Special AT-rich| sequence-binding protein 1) Length = 764 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 106 QLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMPWLSH 228 ++D + E+ +G+ + +QP P + PP+PA LSH Sbjct: 252 EMDSLSELSQQGANHVNFGQQPVPGNTAEQPPSPAQ--LSH 290
>BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 870 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Frame = +1 Query: 139 GSGDTHQPEQPYPRHHLPTPP----TPAMP 216 GSG P QP P H P PP TP +P Sbjct: 75 GSGPPATPAQPQPGLHAPAPPASQYTPMLP 104
>HMX2_MOUSE (P43687) Homeobox protein HMX2 (Homeobox protein Nkx-5.2)| Length = 273 Score = 28.9 bits (63), Expect = 6.8 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 148 DTHQPEQPYPRHHLPTP 198 D H P++P P+HH P P Sbjct: 69 DPHGPKEPSPKHHTPIP 85
>SATB1_HUMAN (Q01826) DNA-binding protein SATB1 (Special AT-rich| sequence-binding protein 1) Length = 763 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 106 QLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMPWLSH 228 ++D + E+ +G+ + +QP P + PP+PA LSH Sbjct: 252 EMDSLSELSQQGANHVNFGQQPVPGNTAEQPPSPAQ--LSH 290
>PACS1_HUMAN (Q6VY07) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 963 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 130 GNRGSGDTHQPEQPYPRHHLPTPPTPAMP 216 G RGSG P+QP P+ PP P Sbjct: 19 GQRGSGVAQSPQQPPPQQQQQQPPQQPTP 47
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Frame = +1 Query: 55 GHQPTGILGMCSDRGTGQLDPV---QEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMPWLS 225 G Q G+ + S G G L+P Q+ + HQ YP PP PA S Sbjct: 175 GQQSPGLAALQSGGGGG-LEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSS 233 Query: 226 HRRGVAREGAFRA 264 R G GA A Sbjct: 234 PRGGTPGSGAAAA 246
>VATA_CITUN (Q9SM09) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 28.9 bits (63), Expect = 6.8 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Frame = +2 Query: 2 DILTGQRIHAAGWKSALLDTN---PPAFLGCAPTGGPASLTQFKRWATGVLEILISRNSP 172 D+LTG ++A ++++L+ + PP +G PA K Sbjct: 147 DLLTGGDLYATVFENSLMQHHVALPPDAMGKVTYVAPAGQYSLK--------------DT 192 Query: 173 ILGTIFQRLQLRQCLGYLIVEAWPVRAPFELCYALLGPFCLLTNQSFL 316 +L FQ ++ + +++AWPVR P + L LLT Q L Sbjct: 193 VLELEFQGVKK----SFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVL 236
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = +1 Query: 16 TTDPCGGLEIGLVGHQPTGILGMCSDRGTGQLDPVQEMGN-RGSGDTHQ---PEQPYPRH 183 T GG+E+G +G P G +C P + + N RG T Q P Q Y Sbjct: 947 TWQESGGVELGRIGPAPPGSATVCR--------PTRSVPNSRGDYMTMQIGCPRQSY--- 995 Query: 184 HLPTPPTPAMPWLSHRRGVAREGA 255 + T P + + R G+A E A Sbjct: 996 -VDTSPVAPVSYADMRTGIAAEKA 1018
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/32 (37%), Positives = 13/32 (40%) Frame = +1 Query: 169 PYPRHHLPTPPTPAMPWLSHRRGVAREGAFRA 264 PY RH LP PP P + R R A Sbjct: 351 PYERHPLPPPPAPTSSYYVRERSPVRRAPHEA 382
>VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F)| Length = 479 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +1 Query: 34 GLEIGLVGHQPTGILGMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAM 213 GL +GL G G++ + ++ G+ V G RG+ P P R T PTP Sbjct: 7 GLTVGLWGLLWVGVVVVLANASPGRTITV---GPRGNASNAAPSVPRNRSAPRTTPTPPQ 63 Query: 214 P 216 P Sbjct: 64 P 64
>PCP_BACAM (P46107) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 215 Score = 28.5 bits (62), Expect = 8.9 Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 5/118 (4%) Frame = +1 Query: 58 HQPTGILGMCSDRGTGQLDPVQEMGNRGSGDTHQPEQPYPRHHLPTPPTPAMPW--LSHR 231 HQP I+ + G Q+ P + N E P + PA W L + Sbjct: 61 HQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQGGPAAYWTGLPIK 120 Query: 232 R---GVAREGAFRAVLCTIGTFLPSHKPVLLANGIG*RFSHPSSSILELPHIPLDGVQ 396 R + +EG AV T GTF+ +H L + I H + +P+IP +Q Sbjct: 121 RIVEEIKKEGIPAAVSYTAGTFVCNHLFYGLMDEISRHHPHIRGGFIHIPYIPEQTLQ 178
>GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor| (Epididymis-specific protein 6) (Me6 receptor) Length = 1009 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 239 WPVRAPFELCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSA 415 +P + +LC ALL + S++ + GF I VA+FL H + L+ + GL A Sbjct: 652 YPSKILIQLCAALLLLNLIFLLDSWIALYNTRGFCIAVAVFL--HYFLLVSFTWMGLEA 708
>LAMB2_HUMAN (P55268) Laminin beta-2 chain precursor (S-laminin) (Laminin B1s| chain) Length = 1798 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 437 CGCSTRRGQRARTPCTPSSGICGNSRIEL-LGCENLHP 327 C C+ R TPC P+SG C R+ GC+ P Sbjct: 470 CQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLP 507
>PRIM_BPT3 (P20315) DNA primase/helicase (EC 2.7.7.-)| Length = 566 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +1 Query: 67 TGILG-MCSDRGTGQLDPVQEMGNRGSGDTHQPEQ 168 TGI G M +R TG L+P G G GDT EQ Sbjct: 526 TGIAGYMEYNRETGWLEPSSYTGGEGEGDTGWTEQ 560 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,983,300 Number of Sequences: 219361 Number of extensions: 1954245 Number of successful extensions: 7608 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 6864 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7566 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
