>ref|XM_947592.1| Theileria annulata strain Ankara hypothetical protein (TA11485)
            partial mRNA
          Length = 5070

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 58   cccatgaatgaatttcccctc 78
            |||||||||||||||||||||
Sbjct: 2205 cccatgaatgaatttcccctc 2185

>emb|AL669897.15| Mouse DNA sequence from clone RP23-78H4 on chromosome 11 Contains the
             Ywhae gene for tyrosine 3-monooxygenase/tryptophan
             5-monooxygenase activation protein epsilon polypeptide,
             the Doc2b gene for double C2 beta, a novl gene, the 3' end
             of the gene for a novel protein similar to rat
             rabphilin-3a related protein and two CpG islands, complete
             sequence
          Length = 178980

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 367   ggcacacacatgatacagaga 387
             |||||||||||||||||||||
Sbjct: 38079 ggcacacacatgatacagaga 38059

>gb|AC025759.4| Homo sapiens chromosome 5 clone CTD-2367B21, complete sequence
          Length = 147404

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 540   agagtttttcttaacgagtgt 560
             |||||||||||||||||||||
Sbjct: 23819 agagtttttcttaacgagtgt 23839

>gb|AC010486.5|AC010486 Homo sapiens chromosome 5 clone CTD-2331D11, complete sequence
          Length = 105234

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 540   agagtttttcttaacgagtgt 560
             |||||||||||||||||||||
Sbjct: 80601 agagtttttcttaacgagtgt 80621

>ref|XM_418309.1| PREDICTED: Gallus gallus similar to Myelin P2 protein (LOC420198),
           mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 caacccctttcatggcacac 373
           ||||||||||||||||||||
Sbjct: 428 caacccctttcatggcacac 409

>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence
          Length = 186561

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 479    tgtgtgtgcgtgttataaatatgt 502
              |||||||| |||||||||||||||
Sbjct: 181892 tgtgtgtgtgtgttataaatatgt 181915

>gb|AC144758.2| Danio rerio, complete sequence
          Length = 177787

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 479   tgtgtgtgcgtgttataaatatgt 502
             |||||||| |||||||||||||||
Sbjct: 93885 tgtgtgtgtgtgttataaatatgt 93862

>gb|AC005248.1| Homo sapiens BAC clone GS1-83B20 from 7, complete sequence
          Length = 68464

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   tgtgtgtgcgtgttataaat 498
             ||||||||||||||||||||
Sbjct: 66526 tgtgtgtgcgtgttataaat 66507

>ref|XM_988847.1| PREDICTED: Mus musculus similar to transmembrane protein SHREW1
           (LOC433810), mRNA
          Length = 1898

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 ggcacacacatgatacagag 386
           ||||||||||||||||||||
Sbjct: 643 ggcacacacatgatacagag 662

>ref|XM_001000455.1| PREDICTED: Mus musculus similar to transmembrane protein SHREW1
           (LOC433810), mRNA
          Length = 1953

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 ggcacacacatgatacagag 386
           ||||||||||||||||||||
Sbjct: 698 ggcacacacatgatacagag 717

>ref|XM_485506.4| PREDICTED: Mus musculus similar to transmembrane protein SHREW1,
           transcript variant 1 (LOC433810), mRNA
          Length = 1898

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 ggcacacacatgatacagag 386
           ||||||||||||||||||||
Sbjct: 643 ggcacacacatgatacagag 662

>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 479    tgtgtgtgcgtgttataaatatgt 502
              |||||||| |||||||||||||||
Sbjct: 151937 tgtgtgtgtgtgttataaatatgt 151914

>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    catggcacacacatgatacagaga 387
              ||||||| ||||||||||||||||
Sbjct: 163540 catggcatacacatgatacagaga 163563

>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a
              prohibitin (Phb) pseudogene and a novel gene, complete
              sequence
          Length = 213383

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gcacgagggcagcacctcat 25
              ||||||||||||||||||||
Sbjct: 185194 gcacgagggcagcacctcat 185213

>gb|AC104982.7| Homo sapiens chromosome 17, clone RP11-338L22, complete sequence
          Length = 164107

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    ccccgctgtcgccaccatcactgg 140
              ||||||||| ||||||||||||||
Sbjct: 126828 ccccgctgtggccaccatcactgg 126851

>gb|AC104996.4| Homo sapiens chromosome 17, clone RP11-1148O4, complete sequence
          Length = 155848

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ccccgctgtcgccaccatcactgg 140
             ||||||||| ||||||||||||||
Sbjct: 20977 ccccgctgtggccaccatcactgg 21000

>emb|CR523331.1| Gallus gallus finished cDNA, clone ChEST879i3
          Length = 668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 caacccctttcatggcacac 373
           ||||||||||||||||||||
Sbjct: 445 caacccctttcatggcacac 426

>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence
          Length = 161984

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 380   tacagagaggccacaggtgaagat 403
             ||||||||||||||||||| ||||
Sbjct: 47215 tacagagaggccacaggtggagat 47238

>emb|BX935863.1| Gallus gallus finished cDNA, clone ChEST164g15
          Length = 778

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 caacccctttcatggcacac 373
           ||||||||||||||||||||
Sbjct: 428 caacccctttcatggcacac 409

>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   gatacagagaggccacaggt 397
             ||||||||||||||||||||
Sbjct: 74840 gatacagagaggccacaggt 74859

>gb|AC121951.3| Mus musculus BAC clone RP24-217M7 from 9, complete sequence
          Length = 163528

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   gcgcccatgtgtgtgcgtgt 491
             ||||||||||||||||||||
Sbjct: 99540 gcgcccatgtgtgtgcgtgt 99521

>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete
              sequence
          Length = 200933

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    ggcacacacatgatacagag 386
              ||||||||||||||||||||
Sbjct: 189438 ggcacacacatgatacagag 189419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,269,279
Number of Sequences: 3902068
Number of extensions: 4269279
Number of successful extensions: 78659
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78627
Number of HSP's gapped (non-prelim): 32
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)