ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4e19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB098063.1| Oryza sativa (japonica cultivar-group) OsSPDS2 mRNA for aminopropyl transferase, complete cds Length = 1560 Score = 517 bits (261), Expect = e-143 Identities = 507/589 (86%) Strand = Plus / Plus Query: 13 tgcctccttgctgtgtcaaggcgcaagctgctgtggcagaatctgaggccaagtgccacg 72 |||| ||||||||| |||||||| | ||||| | ||||| |||||||| || ||||| | Sbjct: 200 tgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatg 259 Query: 73 ctactgtggtgtccgggtggttcacaggaacccgctcgcgctctggtaaaccaagcaaag 132 | || |||||||| ||||||||||| | | ||||||||| |||||||||| ||||||||| Sbjct: 260 ccacagtggtgtcagggtggttcacggaaccccgctcgcactctggtaaaacaagcaaag 319 Query: 133 cgcagtacttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaaga 192 |||||||||||||||||||||||||||||| || |||||||| ||||||||||||| | Sbjct: 320 tgcagtacttcaacaatccaatgtggcctggagaagctcattctctgaaagtagagaata 379 Query: 193 ttttgtaccagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatg 252 || |||| || || ||||| |||||||||||| | ||||| || ||||| |||||||||| Sbjct: 380 ttctgtatcaagggaaatcaccataccaagaaatcttagtttttgagtcctcaacctatg 439 Query: 253 ggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcatacc 312 ||||||| || ||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 440 ggaatgttctggtgcttgatggtattgtgcagctgaccgaaaaggatgaatgtgcatacc 499 Query: 313 aggaaatggttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttg 372 |||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||| Sbjct: 500 aggaaatggttactcaccttccactgtgctcgattccatcccccaaaagtgttttggttg 559 Query: 373 tcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattcagtggagagta 432 |||||||||||||||||||||| ||| |||||||||||| |||| |||||||||| | Sbjct: 560 tcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctcagtggagaaca 619 Query: 433 tagacatatgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtc 492 | || |||||||| || || ||||||||||||||||| ||||||||||| ||||||| | Sbjct: 620 tcgatatatgtgaaatagaccagctagttattgatgtctgtaaagatttcttcccacaac 679 Query: 493 tatatgttggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttct 552 ||| |||||||| ||||| || ||||| |||||||||||| || ||||| || |||| Sbjct: 680 tatctgttggattcaaagatccccgtgttcaacttcatgttggtgacgctgtggatttct 739 Query: 553 tgagaaattctccagaaggaaaatacgatgccattattgttgattcatc 601 |||||||| | || ||||| ||||| ||||| || |||||||||||||| Sbjct: 740 tgagaaatgcccctgaagggaaatatgatgctatcattgttgattcatc 788
>dbj|AK068518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G09, full insert sequence Length = 1614 Score = 517 bits (261), Expect = e-143 Identities = 507/589 (86%) Strand = Plus / Plus Query: 13 tgcctccttgctgtgtcaaggcgcaagctgctgtggcagaatctgaggccaagtgccacg 72 |||| ||||||||| |||||||| | ||||| | | ||| |||||||| || ||||| | Sbjct: 222 tgccgccttgctgtctcaaggcgaaggctgcggcagtagagtctgaggcaaaatgccatg 281 Query: 73 ctactgtggtgtccgggtggttcacaggaacccgctcgcgctctggtaaaccaagcaaag 132 | || |||||||| ||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 282 ccacagtggtgtcagggtggttcacggaaccccgctcgcgctctggtaaaacaagcaaag 341 Query: 133 cgcagtacttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaaga 192 |||||||||||||||||||||||||||||| || |||||||| ||||||||||||| | Sbjct: 342 tgcagtacttcaacaatccaatgtggcctggagaagctcattctctgaaagtagagaata 401 Query: 193 ttttgtaccagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatg 252 || |||| || || ||||| |||||||||||| | ||||| || ||||| |||||||||| Sbjct: 402 ttctgtatcaagggaaatcaccataccaagaaatcttagtttttgagtcctcaacctatg 461 Query: 253 ggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcatacc 312 ||||||| || ||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 462 ggaatgttctggtgcttgatggtattgtgcagctgaccgaaaaggatgaatgtgcatacc 521 Query: 313 aggaaatggttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttg 372 |||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||| Sbjct: 522 aggaaatggttactcaccttccactgtgctcgattccatcccccaaaagtgttttggttg 581 Query: 373 tcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattcagtggagagta 432 |||||||||||||||||||||| ||| |||||||||||| |||| |||||||||| | Sbjct: 582 tcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctcagtggagaaca 641 Query: 433 tagacatatgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtc 492 | || |||||||| || || ||||||||||||||||| ||||||||||| ||||||| | Sbjct: 642 tcgatatatgtgaaatagaccagctagttattgatgtctgtaaagatttcttcccacaac 701 Query: 493 tatatgttggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttct 552 ||| |||||||| ||||| || ||||| |||||||||||| || ||||| || |||| Sbjct: 702 tatctgttggattcaaagatccccgtgttcaacttcatgttggtgacgctgtggatttct 761 Query: 553 tgagaaattctccagaaggaaaatacgatgccattattgttgattcatc 601 |||||||| | || ||||| ||||| ||||| || |||||||||||||| Sbjct: 762 tgagaaatgcccctgaagggaaatatgatgctatcattgttgattcatc 810
>dbj|AK067301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105J05, full insert sequence Length = 1593 Score = 517 bits (261), Expect = e-143 Identities = 507/589 (86%) Strand = Plus / Plus Query: 13 tgcctccttgctgtgtcaaggcgcaagctgctgtggcagaatctgaggccaagtgccacg 72 |||| ||||||||| |||||||| | ||||| | ||||| |||||||| || ||||| | Sbjct: 224 tgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatg 283 Query: 73 ctactgtggtgtccgggtggttcacaggaacccgctcgcgctctggtaaaccaagcaaag 132 | || |||||||| ||||||||||| | | ||||||||| |||||||||| ||||||||| Sbjct: 284 ccacagtggtgtcagggtggttcacggaaccccgctcgcactctggtaaaacaagcaaag 343 Query: 133 cgcagtacttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaaga 192 |||||||||||||||||||||||||||||| || |||||||| ||||||||||||| | Sbjct: 344 tgcagtacttcaacaatccaatgtggcctggagaagctcattctctgaaagtagagaata 403 Query: 193 ttttgtaccagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatg 252 || |||| || || ||||| |||||||||||| | ||||| || ||||| |||||||||| Sbjct: 404 ttctgtatcaagggaaatcaccataccaagaaatcttagtttttgagtcctcaacctatg 463 Query: 253 ggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcatacc 312 ||||||| || ||||||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 464 ggaatgttctggtgcttgatggtattgtgcagctgaccgaaaaggatgaatgtgcatacc 523 Query: 313 aggaaatggttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttg 372 |||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||| Sbjct: 524 aggaaatggttactcaccttccactgtgctcgattccatcccccaaaagtgttttggttg 583 Query: 373 tcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattcagtggagagta 432 |||||||||||||||||||||| ||| |||||||||||| |||| |||||||||| | Sbjct: 584 tcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctcagtggagaaca 643 Query: 433 tagacatatgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtc 492 | || |||||||| || || ||||||||||||||||| ||||||||||| ||||||| | Sbjct: 644 tcgatatatgtgaaatagaccagctagttattgatgtctgtaaagatttcttcccacaac 703 Query: 493 tatatgttggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttct 552 ||| |||||||| ||||| || ||||| |||||||||||| || ||||| || |||| Sbjct: 704 tatctgttggattcaaagatccccgtgttcaacttcatgttggtgacgctgtggatttct 763 Query: 553 tgagaaattctccagaaggaaaatacgatgccattattgttgattcatc 601 |||||||| | || ||||| ||||| ||||| || |||||||||||||| Sbjct: 764 tgagaaatgcccctgaagggaaatatgatgctatcattgttgattcatc 812
>gb|AY730048.1| Zea mays spermidine synthase (spesyn) mRNA, complete cds Length = 1571 Score = 474 bits (239), Expect = e-130 Identities = 475/551 (86%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 57 gaggccaagtgccacgctactgtggtgtccgggtggttcacaggaaccc-gctcgcgctc 115 |||||||| ||||| | ||||||||| || ||||||||||| ||||||| | ||||| | Sbjct: 204 gaggccaactgccatgatactgtggtttcagggtggttcac-ggaacccagatcgcgttt 262 Query: 116 tggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctggggaggctcattc 175 ||||||| ||||||||| |||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 263 tggtaaaacaagcaaagtgcagtacttcaataacccgatgtggcctggagaggcccattc 322 Query: 176 gttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaagttttagtatt 235 |||||||| |||||||| |||| || || |||||||| ||||||||| ||||||| || Sbjct: 323 attgaaagtggagaagatcttgtttcaagggaaatcgccttaccaagaaattttagtttt 382 Query: 236 cgagtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaa 295 ||||||||||||||||| ||||| |||||||||||||| || |||||| |||||||||| Sbjct: 383 tgagtcttcaacctatggaaatgttcttgtgcttgatggtatagttcagttgactgacaa 442 Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | || Sbjct: 443 ggatgaatgcgcataccaggaaatggttactcaccttccactgtgctcaattcctgcacc 502 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagca 415 || |||||||||||||| ||||||||||||||||||||||| | |||||||||| || Sbjct: 503 gaagaatgttttggttgttggaggtggtgatggtggtgtactgcgcgaaatagccagaca 562 Query: 416 tgattcagtggagagtatagacatatgtgagattgatcagctagttattgatgtttgtaa 475 |||||||||||| | ||| || ||||||||||||||||| |||||||||||||||| || Sbjct: 563 tgattcagtggaaactattgatatatgtgagattgatcaactagttattgatgtttccaa 622 Query: 476 agattttttcccacgtctatatgttggatataaagaccctcgtgtcagacttcatgttgg 535 ||| || || ||| ||| |||||| ||||| ||||||||| ||||||||||||| Sbjct: 623 agaattctttccaaacttatccattggattcaaagatcctcgtgtccgacttcatgttgg 682 Query: 536 cgatgctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttga 595 |||||||| || ||| |||| |||||||| ||||||||||| ||||| |||||||| || Sbjct: 683 tgatgctgttgatttcctgaggaattctcccgaaggaaaatatgatgctattattgtaga 742 Query: 596 ttcatcagatc 606 ||||||||||| Sbjct: 743 ttcatcagatc 753
>gb|AY106455.1| Zea mays PCO123401 mRNA sequence Length = 714 Score = 391 bits (197), Expect = e-105 Identities = 363/415 (87%), Gaps = 3/415 (0%) Strand = Plus / Plus Query: 57 gaggccaagtgccacgctactgtggtgtccgggtggttcacaggaaccc-gctcgcgctc 115 |||||||| ||||| | ||||||||| || ||||||||||| ||||||| | ||||| | Sbjct: 268 gaggccaactgccatgatactgtggtttcagggtggttcac-ggaacccagatcgcgttt 326 Query: 116 tggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctggggaggctcattc 175 ||||||| ||||||||| |||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 327 tggtaaaacaagcaaagtgcagtacttcaataacccgatgtggcctggagaggcccattc 386 Query: 176 gttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaagttttagtatt 235 |||||||| |||||||| |||| || || |||||||| ||||||||| ||||||| || Sbjct: 387 attgaaagtggagaagatcttgtttcaagggaaatcgccttaccaagaaattttagtttt 446 Query: 236 cgagtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaa 295 ||||||||||||||||| ||||| |||||||||||||| || |||||| |||||||||| Sbjct: 447 tgagtcttcaacctatggaaatgttcttgtgcttgatggtatagttcagttgactgacaa 506 Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | || Sbjct: 507 ggatgaatgcgcataccaggaaatggttactcaccttccactgtgctcaattcctgcacc 566 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagca 415 || |||||||||||||| ||||||||||||||||||||||| | |||||||||| || Sbjct: 567 gaagaatgttttggttgttggaggtggtgatggtggtgtactgcgcgaaatagccagaca 626 Query: 416 tgattcagtggagagtatagacatatgtgagattgatcagctagttattgatgtt 470 |||||||||||| | ||| || ||||||||||||||||| |||||||| |||||| Sbjct: 627 tgattcagtggaaactatngatatatgtgagattgatca-ctagttatngatgtt 680
>gb|AY107299.1| Zea mays PCO081586 mRNA sequence Length = 609 Score = 230 bits (116), Expect = 4e-57 Identities = 264/312 (84%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 57 gaggccaagtgccacgctactgtggtgtccgggtggttcacaggaacccgctcgcgctct 116 ||||||| ||||||||| || || || || || |||||||| | | | || ||||||| | Sbjct: 298 gaggccaggtgccacgccaccgtcgtttcaggatggttcactgaaccgcgatcgcgctgt 357 Query: 117 ggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctggggaggctcattcg 176 || ||| | ||||||| ||||| | ||| || || |||||||| || ||||| |||| Sbjct: 358 ggcaaagccagcaaagttcagtattacaataacccgatgtggccaggagaggccaattct 417 Query: 177 ttgaaagtag-agaagattttgtaccagggaaaatcgccataccaagaagttttagtatt 235 |||||||| | ||||||| || |||||||| ||||||| |||||||||||| ||||| || Sbjct: 418 ttgaaagtgggagaagatcttataccaggggaaatcgctataccaagaagtcttagtctt 477 Query: 236 cgagtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaa 295 |||||| || |||||||| || ||||||||||||||||| ||||||||| |||||||||| Sbjct: 478 cgagtcgtcgacctatggtaaagtccttgtgcttgatggtattgttcagttgactgacaa 537 Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| || Sbjct: 538 ggatgaatgtgcataccaggaaatgattactcacctgccactttgctcaattccatcccc 597 Query: 356 taaaaatgtttt 367 |||||| ||||| Sbjct: 598 taaaaaagtttt 609
>gb|DQ103516.1| Zea mays spermidine synthase mRNA, partial cds Length = 329 Score = 188 bits (95), Expect = 1e-44 Identities = 149/167 (89%) Strand = Plus / Plus Query: 165 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 ||||| ||||| |||||||| |||||||| |||| || || |||||||| ||||||||| Sbjct: 161 gaggcccattcattgaaagtggagaagatcttgtttcaagggaaatcgccttaccaagaa 220 Query: 225 gttttagtattcgagtcttcaacctatgggaatgtccttgtgcttgatggaattgttcag 284 ||||||| || ||||||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 221 attttagtttttgagtcttcaacctatggaaatgttcttgtgcttgatggtatagttcag 280 Query: 285 ctgactgacaaggatgaatgtgcataccaggaaatggttactcacct 331 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 281 ttgactgacaaggatgaatgcgcataccaggaaatggttactcacct 327 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 57 gaggccaagtgccacgctactgtggtgtccgggtggttcac 97 |||||||| ||||| | ||||||||| || ||||||||||| Sbjct: 98 gaggccaactgccatgatactgtggtttcagggtggttcac 138
>gb|AY105941.1| Zea mays PCO135078 mRNA sequence Length = 1019 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Plus Query: 382 gtgatggtggtgtactaagagaaatagccaagcatgattcagtggagagtatagacatat 441 |||||||||||||||| | |||||||||| |||||||||||||| | ||| || |||| Sbjct: 1 gtgatggtggtgtactgcgcgaaatagccagacatgattcagtggaaactattgatatat 60 Query: 442 gtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgttg 501 ||||||||||||| |||||||||||||||| ||||| || || ||| ||| ||| Sbjct: 61 gtgagattgatcaactagttattgatgtttccaaagaattctttccaaacttatccattg 120 Query: 502 gatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaatt 561 ||| ||||| ||||||||| ||||||||||||| |||||||| || ||| |||| |||| Sbjct: 121 gattcaaagatcctcgtgtccgacttcatgttggtgatgctgttgatttcctgaggaatt 180 Query: 562 ctccagaaggaaaatacgatgccattattgttgattcatcagatc 606 |||| ||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 181 ctcccgaaggaaaatatgatgctattattgtagattcatcagatc 225
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 157 bits (79), Expect = 5e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||| ||||||||||||||||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 19268650 agtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaagg 19268709 Query: 298 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 352 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 19268710 atgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatc 19268764 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 363 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattca 422 |||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| Sbjct: 19269029 gttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctca 19269088 Query: 423 gtggagagtatagacatatgtgagattgatcagctagttattgatgt 469 ||||||| || || |||||||| || || ||||||||||||||||| Sbjct: 19269089 gtggagaacatcgatatatgtgaaatagaccagctagttattgatgt 19269135 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 117 ggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctgg 163 |||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 19267798 ggtaaaacaagcaaagtgcagtacttcaacaatccaatgtggcctgg 19267844 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 13 tgcctccttgctgtgtcaaggcgcaagctgctgtggcagaatctgaggccaagtgccacg 72 |||| ||||||||| |||||||| | ||||| | ||||| |||||||| || ||||| | Sbjct: 19267573 tgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatg 19267632 Query: 73 ctactgtggtgtccgggtggttcacaggaacccgctcgcgctctggta 120 | || |||||||| ||||||||||| | | ||||||||| |||||||| Sbjct: 19267633 ccacagtggtgtcagggtggttcacggaaccccgctcgcactctggta 19267680 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 540 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 599 ||||| || |||||||||||| | || ||||| ||||| ||||| || |||||||||||| Sbjct: 19269587 gctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattca 19269646 Query: 600 tc 601 || Sbjct: 19269647 tc 19269648 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 168 gctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 |||||||| ||||||||||||| ||| |||| || || ||||| |||||||||||| Sbjct: 19268471 gctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaa 19268527 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 471 tgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagacttcat 530 ||||||||||| ||||||| |||| |||||||| ||||| || ||||| ||||||| Sbjct: 19269220 tgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcat 19269279 Query: 531 gttgg 535 ||||| Sbjct: 19269280 gttgg 19269284
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 157 bits (79), Expect = 5e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||| ||||||||||||||||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 106414 agtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaagg 106473 Query: 298 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 352 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 106474 atgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatc 106528 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 363 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattca 422 |||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| Sbjct: 106793 gttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctca 106852 Query: 423 gtggagagtatagacatatgtgagattgatcagctagttattgatgt 469 ||||||| || || |||||||| || || ||||||||||||||||| Sbjct: 106853 gtggagaacatcgatatatgtgaaatagaccagctagttattgatgt 106899 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 117 ggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctgg 163 |||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 105562 ggtaaaacaagcaaagtgcagtacttcaacaatccaatgtggcctgg 105608 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 13 tgcctccttgctgtgtcaaggcgcaagctgctgtggcagaatctgaggccaagtgccacg 72 |||| ||||||||| |||||||| | ||||| | ||||| |||||||| || ||||| | Sbjct: 105337 tgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatg 105396 Query: 73 ctactgtggtgtccgggtggttcacaggaacccgctcgcgctctggta 120 | || |||||||| ||||||||||| | | ||||||||| |||||||| Sbjct: 105397 ccacagtggtgtcagggtggttcacggaaccccgctcgcactctggta 105444 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 540 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 599 ||||| || |||||||||||| | || ||||| ||||| ||||| || |||||||||||| Sbjct: 107351 gctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattca 107410 Query: 600 tc 601 || Sbjct: 107411 tc 107412 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 168 gctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 |||||||| ||||||||||||| ||| |||| || || ||||| |||||||||||| Sbjct: 106235 gctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaa 106291 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 471 tgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagacttcat 530 ||||||||||| ||||||| |||| |||||||| ||||| || ||||| ||||||| Sbjct: 106984 tgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcat 107043 Query: 531 gttgg 535 ||||| Sbjct: 107044 gttgg 107048
>gb|DQ247922.1| Zea mays spermidine synthase 2 gene, partial cds Length = 892 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||||||||||||||| ||||| |||||||||||||| || |||||| |||||||||||| Sbjct: 797 agtcttcaacctatggaaatgttcttgtgcttgatggtatagttcagttgactgacaagg 856 Query: 298 atgaatgtgcataccaggaaatggttactcacct 331 ||||||| |||||||||||||||||||||||||| Sbjct: 857 atgaatgcgcataccaggaaatggttactcacct 890 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 117 ggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctgg 163 |||||| ||||||||| |||||||||||| || || ||||||||||| Sbjct: 306 ggtaaaacaagcaaagtgcagtacttcaataacccgatgtggcctgg 352 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 57 gaggccaagtgccacgctactgtggtgtccgggtggttcac 97 |||||||| ||||| | ||||||||| || ||||||||||| Sbjct: 98 gaggccaactgccatgatactgtggtttcagggtggttcac 138
>gb|AY110118.1| Zea mays CL7038_1 mRNA sequence Length = 1039 Score = 135 bits (68), Expect = 2e-28 Identities = 146/172 (84%) Strand = Plus / Minus Query: 435 gacatatgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtcta 494 ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| | Sbjct: 1037 gacatatgtgagattgatcagctggttattgatgtgtgcaaagatttcttcccacacttg 978 Query: 495 tatgttggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttg 554 | |||||||| | |||| |||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 977 tctgttggatttcaagatcctcgtgttcaacttcatgtcggcgatgctgtggagttcttg 918 Query: 555 agaaattctccagaaggaaaatacgatgccattattgttgattcatcagatc 606 |||||| |||| || || | ||| ||||| || ||||||||||| ||||||| Sbjct: 917 agaaatgctcctgaggggacatatgatgctatcattgttgattcgtcagatc 866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 8728626 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 8728567 Query: 298 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 352 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 8728566 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 8728512 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 165 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 8728804 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 8728745 Query: 225 gttttagt 232 |||||||| Sbjct: 8728744 gttttagt 8728737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 51 gaatctgaggccaagtgccacgctactgtggtgtccgggtggttcacaggaacccgctcg 110 ||||| ||||||||||||||||| || ||||||||||| |||||||| | |||||||| Sbjct: 8729280 gaatccgaggccaagtgccacgccaccgtggtgtccggatggttcaccgagccccgctcg 8729221 Query: 111 cgc 113 ||| Sbjct: 8729220 cgc 8729218 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 438 atatgtgagattgatcagctagttattgatgt 469 |||||||| ||||||||||||||||||||||| Sbjct: 8728269 atatgtgaaattgatcagctagttattgatgt 8728238 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 468 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 527 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 8728159 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 8728100 Query: 528 catgttggcgatg 540 |||||||| |||| Sbjct: 8728099 catgttggtgatg 8728087 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 540 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 599 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 8727966 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 8727907 Query: 600 tcaga 604 ||||| Sbjct: 8727906 tcaga 8727902 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 363 gttttggttgtcggaggtggtgatggtgg 391 ||||||||| | ||||||||||||||||| Sbjct: 8728344 gttttggttattggaggtggtgatggtgg 8728316
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 135673 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 135614 Query: 298 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 352 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 135613 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 135559 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 165 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 135851 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 135792 Query: 225 gttttagt 232 |||||||| Sbjct: 135791 gttttagt 135784 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 51 gaatctgaggccaagtgccacgctactgtggtgtccgggtggttcacaggaacccgctcg 110 ||||| ||||||||||||||||| || ||||||||||| |||||||| | |||||||| Sbjct: 136327 gaatccgaggccaagtgccacgccaccgtggtgtccggatggttcaccgagccccgctcg 136268 Query: 111 cgc 113 ||| Sbjct: 136267 cgc 136265 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 438 atatgtgagattgatcagctagttattgatgt 469 |||||||| ||||||||||||||||||||||| Sbjct: 135316 atatgtgaaattgatcagctagttattgatgt 135285 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 468 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 527 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 135206 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 135147 Query: 528 catgttggcgatg 540 |||||||| |||| Sbjct: 135146 catgttggtgatg 135134 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 540 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 599 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 135013 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 134954 Query: 600 tcaga 604 ||||| Sbjct: 134953 tcaga 134949 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 363 gttttggttgtcggaggtggtgatggtgg 391 ||||||||| | ||||||||||||||||| Sbjct: 135391 gttttggttattggaggtggtgatggtgg 135363
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 238 agtcttcaacctatgggaatgtccttgtgcttgatggaattgttcagctgactgacaagg 297 |||| ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| |||| Sbjct: 27705 agtcctcaacctatggaaaagttcttgtccttgatggtattgtccagttgactgataagg 27646 Query: 298 atgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatc 352 |||||||||| |||||||||||| ||||||||||| | || |||||||||||||| Sbjct: 27645 atgaatgtgcgtaccaggaaatgattactcaccttccgctttgctcaattccatc 27591 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 165 gaggctcattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaa 224 ||||| ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 27883 gaggcccattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaa 27824 Query: 225 gttttagt 232 |||||||| Sbjct: 27823 gttttagt 27816 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 51 gaatctgaggccaagtgccacgctactgtggtgtccgggtggttcacaggaacccgctcg 110 ||||| ||||||||||||||||| || ||||||||||| |||||||| | |||||||| Sbjct: 28359 gaatccgaggccaagtgccacgccaccgtggtgtccggatggttcaccgagccccgctcg 28300 Query: 111 cgc 113 ||| Sbjct: 28299 cgc 28297 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 438 atatgtgagattgatcagctagttattgatgt 469 |||||||| ||||||||||||||||||||||| Sbjct: 27348 atatgtgaaattgatcagctagttattgatgt 27317 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 468 gtttgtaaagattttttcccacgtctatatgttggatataaagaccctcgtgtcagactt 527 |||||||||||||| |||||| | ||| |||||||| ||||| |||||||| | ||| Sbjct: 27238 gtttgtaaagatttcttcccagatttatctgttggattcaaagatcctcgtgttcggctt 27179 Query: 528 catgttggcgatg 540 |||||||| |||| Sbjct: 27178 catgttggtgatg 27166 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 540 gctgtagagttcttgagaaattctccagaaggaaaatacgatgccattattgttgattca 599 ||||| |||||||| || ||| |||| ||||| | ||| ||||| |||||||| |||||| Sbjct: 27045 gctgtggagttcttaaggaatgctcctgaagggacatatgatgctattattgtcgattca 26986 Query: 600 tcaga 604 ||||| Sbjct: 26985 tcaga 26981 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 363 gttttggttgtcggaggtggtgatggtgg 391 ||||||||| | ||||||||||||||||| Sbjct: 27423 gttttggttattggaggtggtgatggtgg 27395
>dbj|AK065153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B15, full insert sequence Length = 1293 Score = 109 bits (55), Expect = 1e-20 Identities = 158/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 51 gaatctgaggccaagtgccacgctactgtggtgtccgggtggttcacaggaacccgctcg 110 ||||| ||||||||||||||||| || ||||||||||| |||||||| | |||||||| Sbjct: 290 gaatccgaggccaagtgccacgccaccgtggtgtccggatggttcaccgagccccgctcg 349 Query: 111 cgctctggtaaaccaagcaaagcgcagtacttcaacaatccaatgtggcctggggaggct 170 ||| |||||| | ||||| | |||||| | ||| || || |||||||| || ||||| Sbjct: 350 cgcggcggtaaaacgagcaa-gtgcagtattacaataacccgatgtggccaggagaggcc 408 Query: 171 cattcgttgaaagtagagaagattttgtaccagggaaaatcgccataccaagaagtttta 230 ||||| ||||||| |||||||| ||||| ||||| || || |||||||||||||||||| Sbjct: 409 cattcactgaaagttgagaagatcttgtatcaggggaagtcaccataccaagaagtttta 468 Query: 231 gtattcgagtc 241 || || ||||| Sbjct: 469 gtttttgagtc 479 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 525 cttcatgttggcgatgctgtagagttcttgagaaattctccagaaggaaaatacgatgcc 584 ||||||||||| |||||||| |||||||| || ||| |||| ||||| | ||| ||||| Sbjct: 491 cttcatgttggtgatgctgtggagttcttaaggaatgctcctgaagggacatatgatgct 550 Query: 585 attattgttgattcatcaga 604 |||||||| ||||||||||| Sbjct: 551 attattgtcgattcatcaga 570
>gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence Length = 1353 Score = 107 bits (54), Expect = 4e-20 Identities = 216/270 (80%) Strand = Plus / Plus Query: 137 gtacttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaagatttt 196 |||||||||||||||||||||||| || || || ||||| |||||||||| ||| |||| Sbjct: 517 gtacttcaacaatccaatgtggccaggagaagcacattccctgaaagtagaaaaggtttt 576 Query: 197 gtaccagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatgggaa 256 || | ||||||| || || ||| || ||||| || || |||||| || ||||||| || Sbjct: 577 gttcaagggaaagtcagaattccaggaggttttggtttttgagtctgcatcctatggaaa 636 Query: 257 tgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 || || ||||| ||||| ||||||||| ||||||| || ||||||||||| || ||||| Sbjct: 637 agttctagtgctagatggcattgttcagttgactgagaaagatgaatgtgcctatcagga 696 Query: 317 aatggttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcgg 376 ||| | | || ||| | || || ||||| ||||||||| || ||| ||||||| || Sbjct: 697 gatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggttctggttgttgg 756 Query: 377 aggtggtgatggtggtgtactaagagaaat 406 |||||||||||||| || ||||| ||||| Sbjct: 757 gggtggtgatggtggagttctaagggaaat 786 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 513 cctcgtgtcagacttcatgttggcgatgctgt 544 |||||||||| ||||||||||| |||||||| Sbjct: 893 cctcgtgtcaatcttcatgttggtgatgctgt 924
>gb|AY335900.1| Lycopersicon esculentum putative spermine synthase (SPM1) mRNA, complete cds Length = 1162 Score = 107 bits (54), Expect = 4e-20 Identities = 216/270 (80%) Strand = Plus / Plus Query: 137 gtacttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaagatttt 196 |||||||||||||||||||||||| || || || ||||| |||||||||| ||| |||| Sbjct: 202 gtacttcaacaatccaatgtggccaggagaagcacattccctgaaagtagaaaaggtttt 261 Query: 197 gtaccagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatgggaa 256 || | ||||||| || || ||| || ||||| || || |||||| || ||||||| || Sbjct: 262 gttcaagggaaagtcagaattccaggaggttttggtttttgagtctgcatcctatggaaa 321 Query: 257 tgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 || || ||||| ||||| ||||||||| ||||||| || ||||||||||| || ||||| Sbjct: 322 agttctagtgctagatggcattgttcagttgactgagaaagatgaatgtgcctatcagga 381 Query: 317 aatggttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcgg 376 ||| | | || ||| | || || ||||| ||||||||| || ||| ||||||| || Sbjct: 382 gatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggttctggttgttgg 441 Query: 377 aggtggtgatggtggtgtactaagagaaat 406 |||||||||||||| || ||||| ||||| Sbjct: 442 gggtggtgatggtggagttctaagggaaat 471 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 513 cctcgtgtcagacttcatgttggcgatgctgt 544 |||||||||| ||||||||||| |||||||| Sbjct: 578 cctcgtgtcaatcttcatgttggtgatgctgt 609
>gb|DQ173768.1| Populus maximowiczii x Populus nigra spermidine synthase 1 (spds1) mRNA, partial cds Length = 433 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatg 320 ||||| |||||||| |||||||| ||||||| || |||||||| ||||||||||| ||| Sbjct: 4 cttgttcttgatggtattgttcaattgactgagaaagatgaatgcgcataccaggagatg 63 Query: 321 gttactcaccttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggt 380 | | || ||| | || || || ||||||||||| |||| |||||||||||| || ||| Sbjct: 64 atcgcccatcttcccctttgttcgattccatctcccaaaactgttttggttgttggtggt 123 Query: 381 ggtgatggtggtgt 394 |||||||||||||| Sbjct: 124 ggtgatggtggtgt 137
>dbj|AB204520.1| Malus sylvestris SPMS mRNA for spermine synthase, complete cds Length = 1571 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Plus Query: 141 ttcaacaatccaatgtggcctggggaggctcattcgttgaaagtagagaagattttgtac 200 |||||||| || |||||||| || || |||||||| |||||||||| || ||| |||| Sbjct: 456 ttcaacaaccctatgtggccaggtgaagctcattcactgaaagtagaaaatattctgtat 515 Query: 201 cagggaaaatcgccataccaagaagttttagtattcgagtcttcaacctatgggaatgtc 260 ||||||||| |||||||| |||| || || ||||| |||| ||||| || || Sbjct: 516 aggggaaaatcagagtaccaagagattttggtgtttgagtcctcaatatatggaaaagtg 575 Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| |||||||| ||| | ||||||| ||| || |||||||||||||||||||| Sbjct: 576 cttgttcttgatggcattatccagctgagtgagaaagatgaatgtgcataccagga 631
>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3, complete sequence Length = 116350 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 249 tatgggaatgtccttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgca 308 |||||||| || || || |||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 39104 tatgggaaagttctcgtacttgatgggattgttcagttgactgagaaggatgaatgtgct 39163 Query: 309 taccagga 316 |||||||| Sbjct: 39164 taccagga 39171 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ttcaacaatccaatgtggcc 160 |||||||||||||||||||| Sbjct: 38422 ttcaacaatccaatgtggcc 38441
>emb|AJ251302.1|OSA251302 Oryza sativa partial mRNA for putative aminopropyltransferase (spdSyn gene) Length = 883 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 524 acttcatgttggcgatgctgtagagttcttgagaaattctccagaaggaaaatacgatgc 583 |||||||||||| || ||||| || |||||||||||| | || ||||| ||||| ||||| Sbjct: 26 acttcatgttggtgacgctgtggatttcttgagaaatgcccctgaagggaaatatgatgc 85 Query: 584 cattattgttgattcatc 601 || |||||||||||||| Sbjct: 86 tatcattgttgattcatc 103
>emb|Y08252.1|DSSS1 D.stramonium mRNA for spermidine synthase 1 Length = 1190 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 |||||||||||| ||||| |||||| | ||||| || |||| |||||||||||| || Sbjct: 255 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcaattccaaaccc 314 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgt 394 ||||| || |||||| | ||||| |||||||||||||| Sbjct: 315 caaaaaggtgttggttattggaggaggtgatggtggtgt 353 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atagacatatgtgagattga 451 |||||||||||||||||||| Sbjct: 391 atagacatatgtgagattga 410
>gb|BT014110.1| Lycopersicon esculentum clone 133214F, mRNA sequence Length = 1174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 |||||||||||| ||||| |||||| | ||||| || |||| |||||||||||| || Sbjct: 244 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcaattccaaaccc 303 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgt 394 | ||| || |||||| | ||||| |||||||||||||| Sbjct: 304 cagaaaggtgttggttattggaggaggtgatggtggtgt 342 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atagacatatgtgagattga 451 |||||||||||||||||||| Sbjct: 380 atagacatatgtgagattga 399
>gb|AF043109.1|AF043109 Pisum sativum spermidine synthase 2 (SPDSYN2) mRNA, complete cds Length = 1279 Score = 54.0 bits (27), Expect = 5e-04 Identities = 186/239 (77%) Strand = Plus / Plus Query: 150 ccaatgtggcctggggaggctcattcgttgaaagtagagaagattttgtaccagggaaaa 209 |||||||||||||| || |||||||| ||||| |||| |||||||||| || ||||| Sbjct: 225 ccaatgtggcctggagaagctcattctttgaagatagaaaagattttgtttcaaggaaag 284 Query: 210 tcgccataccaagaagttttagtattcgagtcttcaacctatgggaatgtccttgtgctt 269 || |||||| |||| | || ||| |||| ||||| || || || |||||||| | Sbjct: 285 tctgaataccagaaagtcatggttttccagtcatcaacatacggtaaagtccttgttttg 344 Query: 270 gatggaattgttcagctgactgacaaggatgaatgtgcataccaggaaatggttactcac 329 |||||| || ||||||| || || | ||| |||||||| ||||| |||||| | ||||| Sbjct: 345 gatggagttattcagctcacagaaagggacgaatgtgcctaccaagaaatgatcactcat 404 Query: 330 cttgcactgtgctcaattccatctcctaaaaatgttttggttgtcggaggtggtgatgg 388 ||| | || ||||| |||||| || ||||| ||||||||| | || || |||||||| Sbjct: 405 cttcctctctgctctattccaaaccccaaaaaggttttggttattggtggaggtgatgg 463
>dbj|AB006691.1| Hyoscyamus niger mRNA for spermidine synthase 2, complete cds Length = 1263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 |||||||||||| ||||| |||||| | ||||| || |||| ||||| |||||| || Sbjct: 302 ggatgaatgtgcttaccaagaaatgatcactcatctcccactttgctcgattccaaaccc 361 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgt 394 ||||| || |||||| | ||||| |||||||||||||| Sbjct: 362 caaaaaggtgttggttattggaggaggtgatggtggtgt 400 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 156 tggcctggggaggctcattcgttgaaagtagagaagat 193 ||||||||||| || || ||||||||||| |||||||| Sbjct: 162 tggcctggggaagcacactcgttgaaagttgagaagat 199
>ref|XM_641917.1| Dictyostelium discoideum hypothetical protein (DDB0191167), partial mRNA Length = 855 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 362 tgttttggttgtcggaggtggtgatggtggtgtactaagaga 403 ||||||||| || || |||||||||||||||||| ||||||| Sbjct: 252 tgttttggtagttggtggtggtgatggtggtgtattaagaga 293
>dbj|AB240539.1| Vitis vinifera pVvSPMS mRNA for spermine synthase, partial cds Length = 310 Score = 52.0 bits (26), Expect = 0.002 Identities = 131/166 (78%) Strand = Plus / Plus Query: 441 tgtgagattgatcagctagttattgatgtttgtaaagattttttcccacgtctatatgtt 500 |||||||| ||| || | ||||| ||||| ||||| | |||||||||| |||| ||| Sbjct: 144 tgtgagatagataagatggttatagatgtgtgtaagaagtttttcccacagttatacgtt 203 Query: 501 ggatataaagaccctcgtgtcagacttcatgttggcgatgctgtagagttcttgagaaat 560 || | | |||||||||||||| ||||||||||| |||||||| || || | ||| || Sbjct: 204 gggtttgaagaccctcgtgtccagcttcatgttggggatgctgttgaatttcttagacat 263 Query: 561 tctccagaaggaaaatacgatgccattattgttgattcatcagatc 606 || ||||| || || ||||| ||||||||||||||||| |||| Sbjct: 264 gtacctgaagggaagtatgatgcaattattgttgattcatctgatc 309
>gb|AF069757.1|AF069757 Dictyostelium discoideum spermidine synthase gene, complete cds Length = 3280 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 362 tgttttggttgtcggaggtggtgatggtggtgtactaagaga 403 ||||||||| || || |||||||||||||||||| ||||||| Sbjct: 1469 tgttttggtagttggtggtggtgatggtggtgtattaagaga 1510
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaattccatctcc 355 |||||||||||| || || |||||| ||||||| || |||| |||||||||||| ||| Sbjct: 449 ggatgaatgtgcctatcaagaaatgattactcatctcccactctgctcaattccaaatcc 508 Query: 356 taaaaatgttttggttgtcggaggtggtgatggtggtgtact 397 || || ||||||||| | || || || |||||||| ||||| Sbjct: 509 aaagaaggttttggttattggtggaggagatggtggggtact 550 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 151 caatgtggcctggggaggctcattcgttgaaagtagagaagattttgtaccagggaaa 208 |||||||||| || ||||| || || ||||| ||||||||||||||| |||||||| Sbjct: 304 caatgtggccaggagaggcacactccttgaagatagagaagattttgtttcagggaaa 361
>gb|AY646352.1| Cucumis sativus spermidine synthase mRNA, complete cds Length = 1398 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 ccaatgtggcctggggaggctcattcgttgaaagtagagaagattttgt 198 |||||||||||||| |||||||| || ||||| || |||||| |||||| Sbjct: 183 ccaatgtggcctggagaggctcactccttgaaggtggagaaggttttgt 231
>gb|DQ173769.1| Populus maximowiczii x Populus nigra spermidine synthase 2 (spds2) mRNA, partial cds Length = 473 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 296 ggatgaatgtgcataccaggaaatggttactcaccttgcactgtgctcaatt 347 ||||||||||||||| || |||||| | ||||||||| | || ||||||||| Sbjct: 64 ggatgaatgtgcatatcaagaaatgatcactcaccttcctctttgctcaatt 115
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 362 tgttttggttgtcggaggtggtgatggtggtg 393 |||||| ||||| ||||||||||||||||||| Sbjct: 43814 tgttttcgttgttggaggtggtgatggtggtg 43783
>ref|XM_451945.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B09372g predicted mRNA Length = 882 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 363 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattc 421 ||||||||| |||| ||||| ||||| ||||| | |||||||| | |||||||||||| Sbjct: 271 gttttggttatcggtggtggcgatggcggtgtcttgagagaaattgtcaagcatgattc 329
>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1 of 3 of the complete sequence Length = 106598 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 364 ttttggttgtcggaggtggtgatggtggtgt 394 |||||||||| || ||||||||||||||||| Sbjct: 44792 ttttggttgttggtggtggtgatggtggtgt 44762
>emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chromosome 13 Contains the 5' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel) and a CpG island, complete sequence Length = 87397 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 364 ttttggttgtcggaggtggtgatggtggtgt 394 |||||||||| || ||||||||||||||||| Sbjct: 48489 ttttggttgttggtggtggtgatggtggtgt 48459
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 363 gttttggttgtcggaggtggtgatggtggtgtactaagagaaatagccaagcatgattc 421 ||||||||| |||| ||||| ||||| ||||| | |||||||| | |||||||||||| Sbjct: 821658 gttttggttatcggtggtggcgatggcggtgtcttgagagaaattgtcaagcatgattc 821716
>gb|DQ295236.1| Trimastix pyriformis translation elongation factor 2 (EF-2) gene, partial cds Length = 2298 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 gttgtcggaggtggtgatggtg 390 |||||||||||||||||||||| Sbjct: 1047 gttgtcggaggtggtgatggtg 1026
>ref|NM_124691.2| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.3 mRNA, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 648 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 688 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 873 gatgccatcattgttgattcttcagatc 900 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 555 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 610
>ref|NM_180848.1| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.2 mRNA, complete cds Length = 1919 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 674 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 714 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 899 gatgccatcattgttgattcttcagatc 926 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 581 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 636
>ref|NM_180847.1| Arabidopsis thaliana SPDS3 (SPERMIDINE SYNTHASE 3) AT5G53120 (SPDS3) transcript variant AT5G53120.1 mRNA, complete cds Length = 1949 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 704 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 744 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 929 gatgccatcattgttgattcttcagatc 956 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 611 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 666
>gb|AC163452.12| Mus musculus chromosome 19, clone RP23-405C7, complete sequence Length = 185406 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 464 tgatgtttgtaaagattttttccca 488 ||||||| ||||||||||||||||| Sbjct: 10722 tgatgttagtaaagattttttccca 10746
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 360 aatgttttggttgtcggaggtggtgatggtggt 392 |||||||| ||||| || ||||||||||||||| Sbjct: 111058 aatgttttagttgtaggtggtggtgatggtggt 111090
>gb|BT015527.1| Arabidopsis thaliana At5g53120 mRNA sequence Length = 1077 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 427 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 467 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 652 gatgccatcattgttgattcttcagatc 679 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 334 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 389
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ggtggtgatggtggtgtacta 398 ||||||||||||||||||||| Sbjct: 37306 ggtggtgatggtggtgtacta 37326
>ref|XM_709747.1| Candida albicans SC5314 spermidine synthase (CaO19.2250), mRNA Length = 894 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 ggtggtgatggtggtgtactaagagaaat 406 ||||||||||||||||| |||||||||| Sbjct: 289 ggtggtgatggtggtgttttaagagaaat 317
>ref|XM_709685.1| Candida albicans SC5314 hypothetical protein (CaO19.9790), mRNA Length = 894 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 ggtggtgatggtggtgtactaagagaaat 406 ||||||||||||||||| |||||||||| Sbjct: 289 ggtggtgatggtggtgttttaagagaaat 317
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ggtggtgatggtggtgtacta 398 ||||||||||||||||||||| Sbjct: 32706601 ggtggtgatggtggtgtacta 32706581
>ref|XM_445476.1| Candida glabrata CBS138, CAGL0D01408g partial mRNA Length = 882 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 378 ggtggtgatggtggtgtactaagagaaatagccaagcatga 418 ||||||||||||||||| || |||||| | | ||||||||| Sbjct: 286 ggtggtgatggtggtgttcttagagaagttgtcaagcatga 326
>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence Length = 221128 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 gaaattctccagaaggaaaat 576 ||||||||||||||||||||| Sbjct: 20212 gaaattctccagaaggaaaat 20232
>gb|BT000742.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1447 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 659 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 699 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 884 gatgccatcattgttgattcttcagatc 911 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 566 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 621
>ref|XM_644424.1| Entamoeba histolytica HM-1:IMSS Niemann-Pick C1 protein, putative (293.t00005) partial mRNA Length = 4020 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 tatatgttggatataaagacc 513 ||||||||||||||||||||| Sbjct: 577 tatatgttggatataaagacc 557
>ref|XM_720267.1| Plasmodium yoelii yoelii str. 17XNL spermidine synthase (PY04977) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 actgacaaggatgaatgtgcataccaggaaatg 320 ||||| || ||||||||||||||||| |||||| Sbjct: 283 actgaaaaagatgaatgtgcataccatgaaatg 315
>ref|XM_671848.1| Plasmodium berghei strain ANKA spermidine synthase (PB000058.03.0) partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 actgacaaggatgaatgtgcataccaggaaatg 320 ||||| || ||||||||||||||||| |||||| Sbjct: 283 actgaaaaagatgaatgtgcataccatgaaatg 315
>emb|AJ271622.1|PFA271622 Plasmodium falciparum mRNA for spermidine synthase (spds gene) Length = 966 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 360 aatgttttggttgtcggaggtggtgatggtggt 392 |||||||| ||||| || ||||||||||||||| Sbjct: 355 aatgttttagttgtaggtggtggtgatggtggt 387
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 ggaggtggtgatggtggtgta 395 ||||||||||||||||||||| Sbjct: 88488 ggaggtggtgatggtggtgta 88508
>gb|AY079367.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1111 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 430 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 470 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 655 gatgccatcattgttgattcttcagatc 682 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 337 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 392
>gb|AY040013.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1464 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 674 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 714 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 899 gatgccatcattgttgattcttcagatc 926 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 581 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 636
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 378 ggtggtgatggtggtgtactaagagaaatagccaagcatga 418 ||||||||||||||||| || |||||| | | ||||||||| Sbjct: 158068 ggtggtgatggtggtgttcttagagaagttgtcaagcatga 158108
>gb|AF424571.1|AF424571 Arabidopsis thaliana AT5g53120/MFH8_5 mRNA, complete cds Length = 1472 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 704 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 744 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 611 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 666
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ggtggtgatggtggtgtacta 398 ||||||||||||||||||||| Sbjct: 32797111 ggtggtgatggtggtgtacta 32797091
>gb|AY087226.1| Arabidopsis thaliana clone 33021 mRNA, complete sequence Length = 1339 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 354 cctaaaaatgttttggttgtcggaggtggtgatggtggtgt 394 |||||||||||| | ||||| || || |||||||||||||| Sbjct: 569 cctaaaaatgttcttgttgttggtggaggtgatggtggtgt 609 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 794 gatgccatcattgttgattcttcagatc 821 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 476 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 531
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 gaaattctccagaaggaaaat 576 ||||||||||||||||||||| Sbjct: 76923 gaaattctccagaaggaaaat 76943
>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 150 ccaatgtggcctggggaggctcattcgttgaaagtagagaagattttgt 198 ||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 260 ccaatgtggccaggagaggcacactccttgaagatagagaagattttgt 308
>emb|AM158913.1| Plantago major partial mRNA for spermidine synthase (spds1 gene) Length = 689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 ttattgttgattcatcagatc 606 ||||||||||||||||||||| Sbjct: 232 ttattgttgattcatcagatc 252
>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence Length = 184017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gatggaattgttcagctgac 289 |||||||||||||||||||| Sbjct: 168460 gatggaattgttcagctgac 168441
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gatggaattgttcagctgac 289 |||||||||||||||||||| Sbjct: 1684 gatggaattgttcagctgac 1665
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 tgtcggaggtggtgatggtggtgt 394 |||||||||||||||||| ||||| Sbjct: 3529599 tgtcggaggtggtgatggcggtgt 3529576
>ref|XM_959586.1| Neurospora crassa OR74A hypothetical protein (NCU09244.1) partial mRNA Length = 3885 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ggttgtcggaggtggtgatg 387 |||||||||||||||||||| Sbjct: 80 ggttgtcggaggtggtgatg 99
>ref|XM_331635.1| Neurospora crassa OR74A hypothetical protein (NCU09244.1) partial mRNA Length = 3885 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ggttgtcggaggtggtgatg 387 |||||||||||||||||||| Sbjct: 80 ggttgtcggaggtggtgatg 99
>gb|AY442259.1| Populus alba x Populus tremula clone cET-1-pop1-506 predicted protein mRNA, complete cds Length = 2450 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 439 cggaggtggtgatggtggtg 420
>ref|XM_387541.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07365.1) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 579 cggaggtggtgatggtggtg 598
>gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-69G12, complete sequence Length = 77713 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccaggaaatggttactcacc 330 |||||||||||||||||||| Sbjct: 28216 ccaggaaatggttactcacc 28197
>gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, complete sequence Length = 187282 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 gatgaatgtgcataccaggaaatggttactca 328 ||||||||||||||||| ||| ||||| |||| Sbjct: 9963 gatgaatgtgcataccatgaattggtttctca 9994
>gb|DQ127553.1| Emiliania huxleyi virus 163 clone new39.seq partial sequence Length = 7701 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 6082 cggaggtggtgatggtggtg 6063
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence Length = 92099 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggaggtggtgatggtggtgt 394 |||||||||||||||||||| Sbjct: 65879 ggaggtggtgatggtggtgt 65860
>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the 5' part of a novel gene, the 5' part of the gene for KIAA0790 protein (KIAA0790) and a CpG island, complete sequence Length = 154288 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ttgatgtttgtaaagatttt 482 |||||||||||||||||||| Sbjct: 40945 ttgatgtttgtaaagatttt 40926
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 tcctaaaaatgttttggttgtcgg 376 ||||||||||||||||||| |||| Sbjct: 715374 tcctaaaaatgttttggttatcgg 715397
>emb|BX842627.1| Neurospora crassa DNA linkage group I BAC clone B8J22 Length = 75335 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ggttgtcggaggtggtgatg 387 |||||||||||||||||||| Sbjct: 50937 ggttgtcggaggtggtgatg 50918
>emb|AL603710.8| Mouse DNA sequence from clone RP23-247B13 on chromosome 11 Contains the 3' end of the Nt5m gene for 5'-3'-nucleotidase (mitochondrial), four novel genes, the Rasd1 gene for RAS dexamethasone-induced 1, the 3' end of the Pemt gene for phosphatidylethanolamine N-methyltransferase and two CpG islands, complete sequence Length = 179124 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gatgtttgtaaagatttttt 484 |||||||||||||||||||| Sbjct: 4819 gatgtttgtaaagatttttt 4800
>gb|AC163614.4| Mus musculus BAC clone RP23-102K8 from chromosome 1, complete sequence Length = 201646 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccttgcctccttgctgtgtc 29 |||||||||||||||||||| Sbjct: 41724 ccttgcctccttgctgtgtc 41705
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 271456 cggaggtggtgatggtggtg 271437
>gb|AC112221.2| Homo sapiens chromosome 3 clone RP11-11C8, complete sequence Length = 151382 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 aagccttgcctccttgctgtgtca 30 ||||||||||||||||| |||||| Sbjct: 108324 aagccttgcctccttgccgtgtca 108347
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence Length = 193100 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ggaggtggtgatggtggtgt 394 |||||||||||||||||||| Sbjct: 66719 ggaggtggtgatggtggtgt 66738
>gb|DQ074728.1| Fragaria x ananassa spermidine synthase mRNA, partial cds Length = 378 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 432 atagacatatgtgagattgatcagctagttattgatgttt 471 ||||| ||||||||||||||| || | ||| ||||||||| Sbjct: 10 atagatatatgtgagattgataagatggttgttgatgttt 49
>emb|BX572079.7| Zebrafish DNA sequence from clone DKEY-35L8 in linkage group 15, complete sequence Length = 192849 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 286 tgactgacaaggatgaatgtgcatacca 313 ||||||| | |||||||||||||||||| Sbjct: 17280 tgactgatatggatgaatgtgcatacca 17253
>gb|AC068808.20|AC068808 Mus musculus 11 BAC RP23-479J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 171146 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gatgtttgtaaagatttttt 484 |||||||||||||||||||| Sbjct: 107508 gatgtttgtaaagatttttt 107527
>emb|BX831219.1|CNS09ZFS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 887 gatgccatcattgttgattcttcagatc 914 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 569 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 624
>gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380F24, complete sequence Length = 134640 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccaggaaatggttactcacc 330 |||||||||||||||||||| Sbjct: 116501 ccaggaaatggttactcacc 116482
>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence Length = 171048 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ccaggaaatggttactcacc 330 |||||||||||||||||||| Sbjct: 85090 ccaggaaatggttactcacc 85109
>gb|AC156446.2| Volvox carteri clone JGIAOBO-29H23, complete sequence Length = 31927 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 24943 cggaggtggtgatggtggtg 24962
>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8 Length = 62420 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 gatgccattattgttgattcatcagatc 606 |||||||| ||||||||||| ||||||| Sbjct: 13548 gatgccatcattgttgattcttcagatc 13575 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 cttgtgcttgatggaattgttcagctgactgacaaggatgaatgtgcataccagga 316 ||||| || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 12739 cttgttctagatggtatcgtacagctgaccgaaaaagatgaatgtgcatatcagga 12794
>emb|AL163032.3|CNS01RI9 Human chromosome 14 DNA sequence BAC C-2303B20 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 130313 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 aaatagccaagcatgattca 422 |||||||||||||||||||| Sbjct: 10662 aaatagccaagcatgattca 10643
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cggaggtggtgatggtggtg 393 |||||||||||||||||||| Sbjct: 56830 cggaggtggtgatggtggtg 56849
>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome Length = 816394 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttgtgcttgatggaattgtt 281 |||||||||||||||||||| Sbjct: 576796 ttgtgcttgatggaattgtt 576815
>gb|AC161420.6| Mus musculus BAC clone RP24-358O9 from chromosome 1, complete sequence Length = 200763 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccttgcctccttgctgtgtc 29 |||||||||||||||||||| Sbjct: 153837 ccttgcctccttgctgtgtc 153818
>emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-33N16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158838 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 aaatagccaagcatgattca 422 |||||||||||||||||||| Sbjct: 122856 aaatagccaagcatgattca 122837
>dbj|AB006690.1| Hyoscyamus niger mRNA for spermidine synthase 1, complete cds Length = 1213 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 156 tggcctggggaggctcattcgttgaaagtagagaagattttgtaccagggaaaatc 211 ||||||||||| || || || ||||| || |||||||| |||| ||||||||||| Sbjct: 155 tggcctggggaagcacactccttgaaggttgagaagatattgtttcagggaaaatc 210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,788,238 Number of Sequences: 3902068 Number of extensions: 5788238 Number of successful extensions: 144715 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144240 Number of HSP's gapped (non-prelim): 469 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
