ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal4e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468121.1| Oryza sativa (japonica cultivar-group), mRNA 230 5e-57
2dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 5e-57
3gb|AY107865.1| Zea mays PCO073209 mRNA sequence 167 6e-38
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
5dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
6dbj|AK111076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
8dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
9gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosom... 42 2.3
10gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 42 2.3
11gb|AY376435.1| Paracoccidioides brasiliensis thioredoxin mRNA, c... 42 2.3
12emb|AL096755.1|HS477J10A Human DNA sequence from clone RP3-477J1... 42 2.3
13gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, com... 42 2.3
14gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, co... 42 2.3
15gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.3
16gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, co... 42 2.3
17emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chr... 42 2.3
18dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
19ref|XM_479940.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
20ref|XM_450920.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
21ref|NM_193195.1| Oryza sativa (japonica cultivar-group), predic... 40 8.9
22ref|XM_472350.1| Oryza sativa (japonica cultivar-group), predic... 40 8.9
23gb|AC113100.12| Mus musculus chromosome 1, clone RP23-317I17, co... 40 8.9
24gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.9
25gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
26ref|XM_367702.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 8.9
27gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome... 40 8.9
28ref|XM_709319.1| Candida albicans SC5314 hypothetical protein (C... 40 8.9
29ref|XM_709279.1| Candida albicans SC5314 hypothetical protein (C... 40 8.9
30gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.9
31gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, comple... 40 8.9
32gb|CP000059.1| Pseudomonas syringae pv. phaseolicola 1448A large... 40 8.9
33gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 8.9
34gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete se... 40 8.9
35gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosom... 40 8.9
36gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 40 8.9
37gb|AC099618.4| Mus musculus chromosome 1, clone RP23-455H15, com... 40 8.9
38emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 8.9
39emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chr... 40 8.9
40emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11... 40 8.9
41emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4,... 40 8.9
42emb|AL645623.13| Mouse DNA sequence from clone RP23-391K14 on ch... 40 8.9
43emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 40 8.9
44dbj|AB252990.1| Tricholoma matsutake DNA, microsatellite marker ... 40 8.9
45gb|AE005676.1| Caulobacter crescentus CB15 section 2 of 359 of t... 40 8.9
46gb|AF462346.1|AF462346 Pantoea agglomerans pv. gypsophilae plasm... 40 8.9
47emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 ... 40 8.9
48gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 8.9
49gb|AC161423.1| Mus musculus BAC clone RP23-291E12 from chromosom... 40 8.9
50gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.9
51ref|NG_004818.1| Gallus gallus cadherin-related neuronal recepto... 40 8.9
52dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
53gb|M55224.1|CCRDNAK Caulobacter crescentus heat shock protein (d... 40 8.9
54dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
55dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
58gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 8.9
59dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
60dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
61dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
62dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
63dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
64dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
65dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
66dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
67dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
68dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
69dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
70emb|AJ439731.1|PSA439731 Pseudomonas syringae pv. glycinea avrPp... 40 8.9
71emb|AJ439730.1|PSA439730 Pseudomonas syringae pv. savastanoi avr... 40 8.9
72ref|XM_319393.2| Anopheles gambiae str. PEST ENSANGP00000006189 ... 40 8.9
73dbj|AK105282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
74dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
75dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
76dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
77ref|NM_212417.1| Eremothecium gossypii AFR733Wp (AFR733W), mRNA 40 8.9
78dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
79emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.9
80gb|AC003038.1|AC003038 Human DNA from chromosome 19-specific cos... 40 8.9
81gb|DQ332585.1| Synthetic construct Saccharomyces cerevisiae clon... 40 8.9
82gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 8.9
83gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
84gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet... 40 8.9
85gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping c... 40 8.9
86gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, compl... 40 8.9
87gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromosome VIII co... 40 8.9
88emb|AJ277494.1|PSY277494 Pseudomonas syringae pv. phaseolicola a... 40 8.9
89gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene,... 40 8.9
90emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chr... 40 8.9
91gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene,... 40 8.9
92gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (UPF2) gene,... 40 8.9
93emb|AL603706.13| Mouse DNA sequence from clone RP23-407I21 on ch... 40 8.9
94emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chro... 40 8.9
95emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chr... 40 8.9
96emb|AL928730.7| Mouse DNA sequence from clone RP23-186A19 on chr... 40 8.9 
>ref|XM_468121.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1404

 Score =  230 bits (116), Expect = 5e-57
 Identities = 323/392 (82%)
 Strand = Plus / Plus

                                                                       
Query: 46  gtcctctccgacgccaacaagcggttcctctacgacgtgggggtgtaccaagaagaagaa 105
           |||||||| ||| | ||||||||||||||||||||||||||||| ||  | || || || 
Sbjct: 602 gtcctctcagactcaaacaagcggttcctctacgacgtgggggtatatgatgatgacgac 661

                                                                       
Query: 106 gacagcgacgacagcatgcaggggatgggggacttccttggtgagatggcccatatgatg 165
            |   ||| |||| | |||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 662 aatgacgatgacaacctgcaggggatgggggacttcattggtgagatggcccagatgatg 721

                                                                       
Query: 166 agccagacgcggccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggac 225
           |||||| | |||||| ||||||||||||||||  | || ||||||||||| || || |||
Sbjct: 722 agccaggcacggccaacgaggcaggagagctttaaagaactgcagcagctattcgtagac 781

                                                                       
Query: 226 atgttccagtctgatattgactcgggattttgcaatggacctgccaagggccatcatgac 285
           ||||||||  ||||| |||| ||||| || |||||||||||  | ||| || | |||  |
Sbjct: 782 atgttccaagctgatcttgattcgggtttctgcaatggaccctcaaagtgctaccatacc 841

                                                                       
Query: 286 ccgttccaaagacagactcaaacattctcgacctccccttcctcgccgccatctccacca 345
           | |  |||||| ||||||| ||||| ||| |||||||||||   | | || |||||||| 
Sbjct: 842 caggcccaaagccagactcgaacatcctcaacctccccttcgatgtcaccgtctccaccg 901

                                                                       
Query: 346 cctccgctagctacagaggcagaagcagcctcatgtaacggcattaacaagcgtggctca 405
           |||||  ||||||| ||||||||| |  | |||||||| || ||||| |||||||| |||
Sbjct: 902 cctccagtagctactgaggcagaatcgccatcatgtaatggtattaataagcgtggttca 961

                                           
Query: 406 tcagcaatgggctctgggaagcctccaagagc 437
           |||||||||| |||||||||||||||||||||
Sbjct: 962 tcagcaatggactctgggaagcctccaagagc 993



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 1   gaggaggccaaggagaagttccaggagatccagggcgcctattc 44
           ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaggaagccaaggagaagttccaggagatccagggcgcctattc 431



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                              
Query: 549  gaagcagaagctgtcgtcgaagcacgatgtctcgtccgaggacgagatgc 598
            |||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 1111 gaagcagaaggtgtcgtcgaagcacgacgtctcgtctgaggacgagatgc 1160
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>dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092E02, full
           insert sequence
          Length = 1403

 Score =  230 bits (116), Expect = 5e-57
 Identities = 323/392 (82%)
 Strand = Plus / Plus

                                                                       
Query: 46  gtcctctccgacgccaacaagcggttcctctacgacgtgggggtgtaccaagaagaagaa 105
           |||||||| ||| | ||||||||||||||||||||||||||||| ||  | || || || 
Sbjct: 601 gtcctctcagactcaaacaagcggttcctctacgacgtgggggtatatgatgatgacgac 660

                                                                       
Query: 106 gacagcgacgacagcatgcaggggatgggggacttccttggtgagatggcccatatgatg 165
            |   ||| |||| | |||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 661 aatgacgatgacaacctgcaggggatgggggacttcattggtgagatggcccagatgatg 720

                                                                       
Query: 166 agccagacgcggccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggac 225
           |||||| | |||||| ||||||||||||||||  | || ||||||||||| || || |||
Sbjct: 721 agccaggcacggccaacgaggcaggagagctttaaagaactgcagcagctattcgtagac 780

                                                                       
Query: 226 atgttccagtctgatattgactcgggattttgcaatggacctgccaagggccatcatgac 285
           ||||||||  ||||| |||| ||||| || |||||||||||  | ||| || | |||  |
Sbjct: 781 atgttccaagctgatcttgattcgggtttctgcaatggaccctcaaagtgctaccatacc 840

                                                                       
Query: 286 ccgttccaaagacagactcaaacattctcgacctccccttcctcgccgccatctccacca 345
           | |  |||||| ||||||| ||||| ||| |||||||||||   | | || |||||||| 
Sbjct: 841 caggcccaaagccagactcgaacatcctcaacctccccttcgatgtcaccgtctccaccg 900

                                                                       
Query: 346 cctccgctagctacagaggcagaagcagcctcatgtaacggcattaacaagcgtggctca 405
           |||||  ||||||| ||||||||| |  | |||||||| || ||||| |||||||| |||
Sbjct: 901 cctccagtagctactgaggcagaatcgccatcatgtaatggtattaataagcgtggttca 960

                                           
Query: 406 tcagcaatgggctctgggaagcctccaagagc 437
           |||||||||| |||||||||||||||||||||
Sbjct: 961 tcagcaatggactctgggaagcctccaagagc 992



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 1   gaggaggccaaggagaagttccaggagatccagggcgcctattc 44
           ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaggaagccaaggagaagttccaggagatccagggcgcctattc 430



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                              
Query: 549  gaagcagaagctgtcgtcgaagcacgatgtctcgtccgaggacgagatgc 598
            |||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 1110 gaagcagaaggtgtcgtcgaagcacgacgtctcgtctgaggacgagatgc 1159
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>gb|AY107865.1| Zea mays PCO073209 mRNA sequence
          Length = 974

 Score =  167 bits (84), Expect = 6e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                       
Query: 118 agcatgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcgg 177
           |||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||| |
Sbjct: 158 agcatgcaggggatgggggacttcatcggtgagatggcccagatgatgagccaggcgcag 217

                                                                       
Query: 178 ccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtct 237
           ||  ||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 218 ccgacgaggcaagaaagctttgaggagctgcagcagctttttgtggacatgtttcagtcc 277

                                                       
Query: 238 gatattgactcgggattttgcaatggacctgccaagggccatca 281
           |||||||| || ||||| |||||| |  ||||||||| ||||||
Sbjct: 278 gatattgattcaggattctgcaataggactgccaaggcccatca 321
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 8e-28
 Identities = 208/255 (81%)
 Strand = Plus / Minus

                                                                            
Query: 183      gaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtctgatat 242
                |||||||||||||||  | || ||||||||||| || || |||||||||||  ||||| |
Sbjct: 33190706 gaggcaggagagctttaaagaactgcagcagctattcgtagacatgttccaagctgatct 33190647

                                                                            
Query: 243      tgactcgggattttgcaatggacctgccaagggccatcatgacccgttccaaagacagac 302
                ||| ||||| || |||||||||||  | ||| || | |||  || |  |||||| |||||
Sbjct: 33190646 tgattcgggtttctgcaatggaccctcaaagtgctaccatacccaggcccaaagccagac 33190587

                                                                            
Query: 303      tcaaacattctcgacctccccttcctcgccgccatctccaccacctccgctagctacaga 362
                || ||||| ||| |||||||||||   | | || |||||||| |||||  ||||||| ||
Sbjct: 33190586 tcgaacatcctcaacctccccttcgatgtcaccgtctccaccgcctccagtagctactga 33190527

                                                                            
Query: 363      ggcagaagcagcctcatgtaacggcattaacaagcgtggctcatcagcaatgggctctgg 422
                ||||||| |  | |||||||| || ||||| |||||||| ||||||||||||| ||||||
Sbjct: 33190526 ggcagaatcgccatcatgtaatggtattaataagcgtggttcatcagcaatggactctgg 33190467

                               
Query: 423      gaagcctccaagagc 437
                |||||||||||||||
Sbjct: 33190466 gaagcctccaagagc 33190452



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 122      tgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggcca 180
                |||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||
Sbjct: 33191561 tgcaggggatgggggacttcattggtgagatggcccagatgatgagccaggcacggcca 33191503



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                            
Query: 1        gaggaggccaaggagaagttccaggagatccagggcgcctattc 44
                ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 33191925 gaggaagccaaggagaagttccaggagatccagggcgcctattc 33191882



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                  
Query: 549      gaagcagaagctgtcgtcgaagcacgatgtctcgtccgaggacgagatgc 598
                |||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 33188894 gaagcagaaggtgtcgtcgaagcacgacgtctcgtctgaggacgagatgc 33188845



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 46       gtcctctccgacgccaacaagcggttcctctacgacgtgggggt 89
                |||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 33191711 gtcctctcagactcaaacaagcggttcctctacgacgtgggggt 33191668



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 316      acctccccttcctcgccgcc 335
                ||||||||||||||||||||
Sbjct: 27136723 acctccccttcctcgccgcc 27136704
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>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_D08
          Length = 163702

 Score =  133 bits (67), Expect = 8e-28
 Identities = 208/255 (81%)
 Strand = Plus / Minus

                                                                         
Query: 183   gaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtctgatat 242
             |||||||||||||||  | || ||||||||||| || || |||||||||||  ||||| |
Sbjct: 20015 gaggcaggagagctttaaagaactgcagcagctattcgtagacatgttccaagctgatct 19956

                                                                         
Query: 243   tgactcgggattttgcaatggacctgccaagggccatcatgacccgttccaaagacagac 302
             ||| ||||| || |||||||||||  | ||| || | |||  || |  |||||| |||||
Sbjct: 19955 tgattcgggtttctgcaatggaccctcaaagtgctaccatacccaggcccaaagccagac 19896

                                                                         
Query: 303   tcaaacattctcgacctccccttcctcgccgccatctccaccacctccgctagctacaga 362
             || ||||| ||| |||||||||||   | | || |||||||| |||||  ||||||| ||
Sbjct: 19895 tcgaacatcctcaacctccccttcgatgtcaccgtctccaccgcctccagtagctactga 19836

                                                                         
Query: 363   ggcagaagcagcctcatgtaacggcattaacaagcgtggctcatcagcaatgggctctgg 422
             ||||||| |  | |||||||| || ||||| |||||||| ||||||||||||| ||||||
Sbjct: 19835 ggcagaatcgccatcatgtaatggtattaataagcgtggttcatcagcaatggactctgg 19776

                            
Query: 423   gaagcctccaagagc 437
             |||||||||||||||
Sbjct: 19775 gaagcctccaagagc 19761



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 122   tgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggcca 180
             |||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||
Sbjct: 20870 tgcaggggatgggggacttcattggtgagatggcccagatgatgagccaggcacggcca 20812



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                         
Query: 1     gaggaggccaaggagaagttccaggagatccagggcgcctattc 44
             ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 21234 gaggaagccaaggagaagttccaggagatccagggcgcctattc 21191



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                               
Query: 549   gaagcagaagctgtcgtcgaagcacgatgtctcgtccgaggacgagatgc 598
             |||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 18203 gaagcagaaggtgtcgtcgaagcacgacgtctcgtctgaggacgagatgc 18154



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 46    gtcctctccgacgccaacaagcggttcctctacgacgtgggggt 89
             |||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 21020 gtcctctcagactcaaacaagcggttcctctacgacgtgggggt 20977
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>dbj|AK111076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E11, full
           insert sequence
          Length = 828

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaggccaaggagaagttccaggagatccagggcgcctattcggtcctctccgacgccaac 63
           ||||||||||||   ||||||||||||||||||||||| || || ||||||||| |||||
Sbjct: 71  gaggccaaggagcgattccaggagatccagggcgcctactccgtgctctccgactccaac 130

                               
Query: 64  aagcggttcctctacgacgt 83
           ||||| ||||||||||||||
Sbjct: 131 aagcgcttcctctacgacgt 150



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 92/109 (84%), Gaps = 6/109 (5%)
 Strand = Plus / Plus

                                                                       
Query: 126 ggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggccagcgag 185
           ||||||||| || |||||||| |||||||| || |||||||||||| ||  ||| |||  
Sbjct: 205 ggggatgggcgatttccttggcgagatggcgcagatgatgagccaggcgacgcctgcg-- 262

                                                            
Query: 186 gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 234
               ||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 263 ----gagagcttcgaggagttgcagcagctgttcgtggacatgttccag 307
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                                
Query: 186     gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 234
               ||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 4879585 gcaggagagcttcgaggagttgcagcagctgttcgtggacatgttccag 4879633



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 49      ctctccgacgccaacaagcggttcctctacgacgt 83
               ||||||||| |||||||||| ||||||||||||||
Sbjct: 4879258 ctctccgactccaacaagcgcttcctctacgacgt 4879292



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 4       gaggccaaggagaagttccaggagatccagggcgccta 41
               ||||||||||||   |||||||||||||||||||||||
Sbjct: 4879076 gaggccaaggagcgattccaggagatccagggcgccta 4879113



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 126     ggggatgggggacttccttggtgagatggcccatatgatgagccag 171
               ||||||||| || ||||| || |||||||| || ||||||||||||
Sbjct: 4879439 ggggatgggcgatttcctcggcgagatggcgcagatgatgagccag 4879484
to top
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E04
          Length = 170701

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 186   gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 234
             ||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 67068 gcaggagagcttcgaggagttgcagcagctgttcgtggacatgttccag 67116



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 49    ctctccgacgccaacaagcggttcctctacgacgt 83
             ||||||||| |||||||||| ||||||||||||||
Sbjct: 66741 ctctccgactccaacaagcgcttcctctacgacgt 66775



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 4     gaggccaaggagaagttccaggagatccagggcgccta 41
             ||||||||||||   |||||||||||||||||||||||
Sbjct: 66559 gaggccaaggagcgattccaggagatccagggcgccta 66596



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 126   ggggatgggggacttccttggtgagatggcccatatgatgagccag 171
             ||||||||| || ||||| || |||||||| || ||||||||||||
Sbjct: 66922 ggggatgggcgatttcctcggcgagatggcgcagatgatgagccag 66967
to top
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence
          Length = 197482

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     aagttccaggagatccagggc 36
              |||||||||||||||||||||
Sbjct: 126185 aagttccaggagatccagggc 126205
to top
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 323   cttcctcgccgccatctccaccacc 347
             |||||||||||||||| ||||||||
Sbjct: 11774 cttcctcgccgccatcgccaccacc 11798
to top
>gb|AY376435.1| Paracoccidioides brasiliensis thioredoxin mRNA, complete cds
          Length = 811

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 322 ccttcctcgccgccatctccaccacctcc 350
           ||||| || ||||||||||||||||||||
Sbjct: 327 ccttcgtctccgccatctccaccacctcc 355
to top
>emb|AL096755.1|HS477J10A Human DNA sequence from clone RP3-477J10 on chromosome 22q13.31-13.33,
             complete sequence
          Length = 96678

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 600   gagcccgcagcagcccagagt 620
             |||||||||||||||||||||
Sbjct: 13721 gagcccgcagcagcccagagt 13741
to top
>gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, complete sequence
          Length = 76050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 330  gccgccatctccaccacctcc 350
            |||||||||||||||||||||
Sbjct: 4906 gccgccatctccaccacctcc 4926
to top
>gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, complete sequence
          Length = 66781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   gccgccatctccaccacctcc 350
             |||||||||||||||||||||
Sbjct: 26274 gccgccatctccaccacctcc 26254
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 37      gcctattcggtcctctccgacgccaacaagcgg 69
               ||||| ||||||||||||||| || ||||||||
Sbjct: 4977549 gcctactcggtcctctccgaccccgacaagcgg 4977517
to top
>gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, complete sequence
          Length = 132211

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    gccgccatctccaccacctcc 350
              |||||||||||||||||||||
Sbjct: 126514 gccgccatctccaccacctcc 126534
to top
>emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chromosome X, complete
              sequence
          Length = 190219

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     aagttccaggagatccagggc 36
              |||||||||||||||||||||
Sbjct: 136657 aagttccaggagatccagggc 136637
to top
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
             sequence
          Length = 190267

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   gccgccatctccaccacctcc 350
             |||||||||||||||||||||
Sbjct: 13183 gccgccatctccaccacctcc 13203
to top
>ref|XM_479940.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 264

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 cccttcctcgccgccatctccacc 344
           ||||||||||||||| ||||||||
Sbjct: 44  cccttcctcgccgccttctccacc 67
to top
>ref|XM_450920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 cccttcctcgccgccatctccacc 344
           ||||||||||||||| ||||||||
Sbjct: 95  cccttcctcgccgccttctccacc 118
to top
>ref|NM_193195.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 cttcctcgccgccatctcca 342
           ||||||||||||||||||||
Sbjct: 117 cttcctcgccgccatctcca 136
to top
>ref|XM_472350.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cctccccttcctcgccgcca 336
           ||||||||||||||||||||
Sbjct: 69  cctccccttcctcgccgcca 50
to top
>gb|AC113100.12| Mus musculus chromosome 1, clone RP23-317I17, complete sequence
          Length = 199991

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     agttccaggagatccagggc 36
              ||||||||||||||||||||
Sbjct: 133922 agttccaggagatccagggc 133903
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ctgcggaagcgggtgcgggt 456
              ||||||||||||||||||||
Sbjct: 828576 ctgcggaagcgggtgcgggt 828595
to top
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   cgccgccatctccaccacctccgc 352
             ||||||||||||||||||| ||||
Sbjct: 71768 cgccgccatctccaccaccgccgc 71745
to top
>ref|XM_367702.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07613.4) partial mRNA
          Length = 7035

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 1    gaggaggccaaggagaagttccaggaga 28
            |||||||||||| |||||||| ||||||
Sbjct: 5140 gaggaggccaagaagaagttcgaggaga 5167
to top
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence
          Length = 197272

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agttccaggagatccagggc 36
              ||||||||||||||||||||
Sbjct: 128285 agttccaggagatccagggc 128304
to top
>ref|XM_709319.1| Candida albicans SC5314 hypothetical protein (CaO19.1767), mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  aagaagaagaagacagcgacgaca 118
           ||||||||||||||| ||||||||
Sbjct: 688 aagaagaagaagacaacgacgaca 711
to top
>ref|XM_709279.1| Candida albicans SC5314 hypothetical protein (CaO19.9336), mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  aagaagaagaagacagcgacgaca 118
           ||||||||||||||| ||||||||
Sbjct: 688 aagaagaagaagacaacgacgaca 711
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    gttccaaagacagactcaaa 307
              ||||||||||||||||||||
Sbjct: 946159 gttccaaagacagactcaaa 946140
to top
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence
          Length = 187517

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    atgggctctgggaagcctcc 431
              ||||||||||||||||||||
Sbjct: 123246 atgggctctgggaagcctcc 123227
to top
>gb|CP000059.1| Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete
            sequence
          Length = 131950

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  gttccaaagacagactcaaa 307
            ||||||||||||||||||||
Sbjct: 7084 gttccaaagacagactcaaa 7065
to top
>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   atcatgacccgttccaaagacaga 301
             ||||||||||| ||||||||||||
Sbjct: 55212 atcatgacccgatccaaagacaga 55189
to top
>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence
          Length = 195266

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   tgactcgggattttgcaatg 262
             ||||||||||||||||||||
Sbjct: 49567 tgactcgggattttgcaatg 49586
to top
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete
             sequence
          Length = 145012

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    aagaagaagaagacagcgacgaca 118
             |||||||||||||| |||||||||
Sbjct: 49418 aagaagaagaagacggcgacgaca 49395
to top
>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    agttccaggagatccagggc 36
             ||||||||||||||||||||
Sbjct: 46852 agttccaggagatccagggc 46871
to top
>gb|AC099618.4| Mus musculus chromosome 1, clone RP23-455H15, complete sequence
          Length = 171215

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    agttccaggagatccagggc 36
             ||||||||||||||||||||
Sbjct: 23558 agttccaggagatccagggc 23539
to top
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    tgagttttgttttgggacga 487
              ||||||||||||||||||||
Sbjct: 177318 tgagttttgttttgggacga 177337
to top
>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a
              ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl
              isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG
              island, complete sequence
          Length = 199601

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ggccagcgaggcaggagagc 195
              ||||||||||||||||||||
Sbjct: 122604 ggccagcgaggcaggagagc 122623
to top
>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3,
             complete sequence
          Length = 94749

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   agctgcagcagctgtttgtg 222
             ||||||||||||||||||||
Sbjct: 75189 agctgcagcagctgtttgtg 75208
to top
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23,
             complete sequence
          Length = 133759

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   cctccccttcctcgccgcca 336
             ||||||||||||||||||||
Sbjct: 33345 cctccccttcctcgccgcca 33326
to top
>emb|AL645623.13| Mouse DNA sequence from clone RP23-391K14 on chromosome 11 Contains the
             5' end of the Zfp403 gene for zinc finger protein 403, the
             Pigw gene for phosphatidylinositol glycan class W, a novel
             gene, the Myohd1 gene for myosin head domain containing 1
             and a CpG island, complete sequence
          Length = 106008

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    agttccaggagatccagggc 36
             ||||||||||||||||||||
Sbjct: 93696 agttccaggagatccagggc 93677
to top
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 323   cttcctcgccgccatctccaccac 346
             |||||||||||||||| |||||||
Sbjct: 69818 cttcctcgccgccatcgccaccac 69795
to top
>dbj|AB252990.1| Tricholoma matsutake DNA, microsatellite marker Trma13
          Length = 961

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 gagatggcccatatgatgag 167
           ||||||||||||||||||||
Sbjct: 711 gagatggcccatatgatgag 730
to top
>gb|AE005676.1| Caulobacter crescentus CB15 section 2 of 359 of the complete genome
          Length = 10672

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  gcctattcggtcctctccga 56
           ||||||||||||||||||||
Sbjct: 262 gcctattcggtcctctccga 281
to top
>gb|AF462346.1|AF462346 Pantoea agglomerans pv. gypsophilae plasmid pPATHehg virulence
           factor avrPphD gene, complete cds
          Length = 2701

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 gttccaaagacagactcaaa 307
           ||||||||||||||||||||
Sbjct: 133 gttccaaagacagactcaaa 114
to top
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9,
             complete sequence
          Length = 174884

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   tgagttttgttttgggacga 487
             ||||||||||||||||||||
Sbjct: 74344 tgagttttgttttgggacga 74363
to top
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     tgactcgggattttgcaatg 262
               ||||||||||||||||||||
Sbjct: 1184975 tgactcgggattttgcaatg 1184994
to top
>gb|AC161423.1| Mus musculus BAC clone RP23-291E12 from chromosome 16, complete sequence
          Length = 226870

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agttccaggagatccagggc 36
              ||||||||||||||||||||
Sbjct: 139749 agttccaggagatccagggc 139768
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     cagctgtttgtggacatgttccag 234
               |||||||||||||||| |||||||
Sbjct: 1785451 cagctgtttgtggacaagttccag 1785474
to top
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10)
          Length = 98944

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   atgggctctgggaagcctcc 431
             ||||||||||||||||||||
Sbjct: 44787 atgggctctgggaagcctcc 44768
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 323      cttcctcgccgccatctccaccac 346
                |||||||||||||||| |||||||
Sbjct: 34863705 cttcctcgccgccatcgccaccac 34863682



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 317      cctccccttcctcgccgcca 336
                ||||||||||||||||||||
Sbjct: 19744883 cctccccttcctcgccgcca 19744864
to top
>gb|M55224.1|CCRDNAK Caulobacter crescentus heat shock protein (dnaK) gene, complete cds;
            and heat shock protein (dnaJ) gene, partial cds
          Length = 3051

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   gcctattcggtcctctccga 56
            ||||||||||||||||||||
Sbjct: 2632 gcctattcggtcctctccga 2651
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      cgccgccatctccaccacctccgc 352
                ||||||||||||||||||| ||||
Sbjct: 27650205 cgccgccatctccaccaccgccgc 27650228



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 321      cccttcctcgccgccatctccacc 344
                ||||||||||||||| ||||||||
Sbjct: 27288060 cccttcctcgccgccttctccacc 27288037



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 321      cccttcctcgccgccatctccacc 344
                ||||||||||||||| ||||||||
Sbjct: 27287821 cccttcctcgccgccttctccacc 27287798
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 321      cccttcctcgccgccatctccacc 344
                ||||||||||||||| ||||||||
Sbjct: 13753871 cccttcctcgccgccttctccacc 13753848



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 321     cccttcctcgccgccatctccacc 344
               ||||||||||||||| ||||||||
Sbjct: 6587046 cccttcctcgccgccttctccacc 6587069



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 321     cccttcctcgccgccatctccacc 344
               ||||||||||||||| ||||||||
Sbjct: 6586807 cccttcctcgccgccttctccacc 6586830
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 321      cccttcctcgccgccatctccacc 344
                ||||||||||||||| ||||||||
Sbjct: 15328784 cccttcctcgccgccttctccacc 15328807



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 321     cccttcctcgccgccatctccacc 344
               ||||||||||||||| ||||||||
Sbjct: 1772784 cccttcctcgccgccttctccacc 1772807
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 323      cttcctcgccgccatctcca 342
                ||||||||||||||||||||
Sbjct: 19197188 cttcctcgccgccatctcca 19197169



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 328      tcgccgccatctccaccacctccg 351
                ||||||||| ||||||||||||||
Sbjct: 12953556 tcgccgccacctccaccacctccg 12953533
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      gaggaggccaaggagaagttccag 24
              ||||||||||||||| ||||||||
Sbjct: 537516 gaggaggccaaggagcagttccag 537539
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>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0702H08
          Length = 166899

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    cttcctcgccgccatctcca 342
              ||||||||||||||||||||
Sbjct: 162605 cttcctcgccgccatctcca 162586
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>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1619_F12
          Length = 133028

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cttcctcgccgccatctcca 342
             ||||||||||||||||||||
Sbjct: 16809 cttcctcgccgccatctcca 16790
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0062G05
          Length = 152802

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 321    cccttcctcgccgccatctccacc 344
              ||||||||||||||| ||||||||
Sbjct: 114415 cccttcctcgccgccttctccacc 114438
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>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0009H02
          Length = 155388

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   cccttcctcgccgccatctccacc 344
             ||||||||||||||| ||||||||
Sbjct: 55145 cccttcctcgccgccttctccacc 55168
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   acctccccttcctcgccgcc 335
             ||||||||||||||||||||
Sbjct: 33172 acctccccttcctcgccgcc 33153
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>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1140D12
          Length = 139301

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 328    tcgccgccatctccaccacctccg 351
              ||||||||| ||||||||||||||
Sbjct: 104997 tcgccgccacctccaccacctccg 104974
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    acctccccttcctcgccgcc 335
              ||||||||||||||||||||
Sbjct: 108372 acctccccttcctcgccgcc 108353
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>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1151D08
          Length = 152824

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   cccttcctcgccgccatctccacc 344
             ||||||||||||||| ||||||||
Sbjct: 85716 cccttcctcgccgccttctccacc 85739



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   cccttcctcgccgccatctccacc 344
             ||||||||||||||| ||||||||
Sbjct: 85477 cccttcctcgccgccttctccacc 85500
to top
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1655_B12
          Length = 132736

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  cccttcctcgccgccatctccacc 344
            ||||||||||||||| ||||||||
Sbjct: 3355 cccttcctcgccgccttctccacc 3332
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 321    cccttcctcgccgccatctccacc 344
              ||||||||||||||| ||||||||
Sbjct: 151985 cccttcctcgccgccttctccacc 151962
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1790_D02
          Length = 162928

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   cccttcctcgccgccatctccacc 344
             ||||||||||||||| ||||||||
Sbjct: 14360 cccttcctcgccgccttctccacc 14383
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>emb|AJ439731.1|PSA439731 Pseudomonas syringae pv. glycinea avrPphDPgy gene
          Length = 2348

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 gttccaaagacagactcaaa 307
           ||||||||||||||||||||
Sbjct: 48  gttccaaagacagactcaaa 29
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>emb|AJ439730.1|PSA439730 Pseudomonas syringae pv. savastanoi avrPphDPsv gene
          Length = 2450

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 gttccaaagacagactcaaa 307
           ||||||||||||||||||||
Sbjct: 162 gttccaaagacagactcaaa 143
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>ref|XM_319393.2| Anopheles gambiae str. PEST ENSANGP00000006189 (ENSANGG00000004716),
            partial mRNA
          Length = 1212

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  agcgacgacagcatgcaggg 128
            ||||||||||||||||||||
Sbjct: 1183 agcgacgacagcatgcaggg 1202
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>dbj|AK105282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D03, full
           insert sequence
          Length = 1578

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cctccccttcctcgccgcca 336
           ||||||||||||||||||||
Sbjct: 457 cctccccttcctcgccgcca 438
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>dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C04, full
           insert sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 323 cttcctcgccgccatctccaccac 346
           |||||||||||||||| |||||||
Sbjct: 284 cttcctcgccgccatcgccaccac 261
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>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full
           insert sequence
          Length = 3349

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 acctccccttcctcgccgcc 335
           ||||||||||||||||||||
Sbjct: 227 acctccccttcctcgccgcc 208
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>dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075F07, full
           insert sequence
          Length = 2028

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 323 cttcctcgccgccatctccaccac 346
           |||||||||||||||| |||||||
Sbjct: 285 cttcctcgccgccatcgccaccac 262
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>ref|NM_212417.1| Eremothecium gossypii AFR733Wp (AFR733W), mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 211 cagctgtttgtggacatgttccag 234
           |||||||||||||||| |||||||
Sbjct: 916 cagctgtttgtggacaagttccag 939
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>dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H09, full
           insert sequence
          Length = 1232

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 323 cttcctcgccgccatctccaccac 346
           |||||||||||||||| |||||||
Sbjct: 319 cttcctcgccgccatcgccaccac 296
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>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 323   cttcctcgccgccatctccaccac 346
             |||||||||||||||| |||||||
Sbjct: 43344 cttcctcgccgccatcgccaccac 43321
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>gb|AC003038.1|AC003038 Human DNA from chromosome 19-specific cosmid R30923, genomic sequence,
             complete sequence
          Length = 40016

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tacagaggcagaagcagcct 376
             ||||||||||||||||||||
Sbjct: 10313 tacagaggcagaagcagcct 10332
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>gb|DQ332585.1| Synthetic construct Saccharomyces cerevisiae clone FLH202938.01X NMD2
            gene, complete sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   aagaagaagaagacagcgac 114
            ||||||||||||||||||||
Sbjct: 2896 aagaagaagaagacagcgac 2915
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 438     tgcggaagcgggtgcgggttacgg 461
               ||||||||||||||||||| ||||
Sbjct: 2229632 tgcggaagcgggtgcgggtgacgg 2229609
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      cgccgccatctccaccacctccgc 352
                ||||||||||||||||||| ||||
Sbjct: 27674193 cgccgccatctccaccaccgccgc 27674216
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>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agttccaggagatccagggc 36
              ||||||||||||||||||||
Sbjct: 103584 agttccaggagatccagggc 103603
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>gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping cosmids R27918 and R33775,
             complete sequence
          Length = 73007

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tacagaggcagaagcagcct 376
             ||||||||||||||||||||
Sbjct: 67296 tacagaggcagaagcagcct 67315
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>gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, complete sequence
          Length = 200615

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agttccaggagatccagggc 36
              ||||||||||||||||||||
Sbjct: 175379 agttccaggagatccagggc 175398
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>gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromosome VIII cosmid 9205
          Length = 39203

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aagaagaagaagacagcgac 114
             ||||||||||||||||||||
Sbjct: 13991 aagaagaagaagacagcgac 13972
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>emb|AJ277494.1|PSY277494 Pseudomonas syringae pv. phaseolicola avrPphD gene
          Length = 2650

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 gttccaaagacagactcaaa 307
           ||||||||||||||||||||
Sbjct: 110 gttccaaagacagactcaaa 91
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>gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, complete cds
          Length = 4883

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   aagaagaagaagacagcgac 114
            ||||||||||||||||||||
Sbjct: 2799 aagaagaagaagacagcgac 2818
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>emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chromosome 11, complete
             sequence
          Length = 178597

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   cagaggcagaagcagcctca 378
             ||||||||||||||||||||
Sbjct: 60540 cagaggcagaagcagcctca 60521
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>gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, complete cds
          Length = 4080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   aagaagaagaagacagcgac 114
            ||||||||||||||||||||
Sbjct: 3257 aagaagaagaagacagcgac 3276
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>gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, complete cds
          Length = 5015

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   aagaagaagaagacagcgac 114
            ||||||||||||||||||||
Sbjct: 4076 aagaagaagaagacagcgac 4095
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>emb|AL603706.13| Mouse DNA sequence from clone RP23-407I21 on chromosome 11, complete
            sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 95   aagaagaagaagacagcgacgaca 118
            ||||||||||||||| ||||||||
Sbjct: 2743 aagaagaagaagacaacgacgaca 2766
to top
>emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chromosome 2, complete
             sequence
          Length = 207718

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    agttccaggagatccagggc 36
             ||||||||||||||||||||
Sbjct: 89733 agttccaggagatccagggc 89752
to top
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete
              sequence
          Length = 221399

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     aagaagaagaagacagcgacgaca 118
              ||||||||||||||| ||||||||
Sbjct: 105445 aagaagaagaagacaacgacgaca 105468
to top
>emb|AL928730.7| Mouse DNA sequence from clone RP23-186A19 on chromosome X, complete
             sequence
          Length = 188862

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    agttccaggagatccagggc 36
             ||||||||||||||||||||
Sbjct: 89975 agttccaggagatccagggc 89994


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,840,280
Number of Sequences: 3902068
Number of extensions: 7840280
Number of successful extensions: 152631
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151516
Number of HSP's gapped (non-prelim): 1111
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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