ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3o22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
2ref|NM_191068.1| Oryza sativa (japonica cultivar-group), predic... 202 7e-49
3dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
5dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
6gb|BT013593.1| Lycopersicon esculentum clone 132356R, mRNA sequence 68 3e-08
7ref|XM_464580.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
8ref|XM_464581.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
9dbj|AK121183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
10dbj|AK070031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
12ref|NM_001035925.1| Arabidopsis thaliana ZIGA4; DNA binding AT1G... 64 4e-07
13ref|NM_100741.3| Arabidopsis thaliana ZIGA4; DNA binding AT1G086... 64 4e-07
14ref|NM_180610.2| Arabidopsis thaliana ZIGA4; DNA binding AT1G086... 64 4e-07
15gb|BT008398.1| Arabidopsis thaliana At1g08690 gene, complete cds 64 4e-07
16gb|AY081303.1| Arabidopsis thaliana unknown protein (At1g08690) ... 64 4e-07
17gb|AF184145.1|AF184145 Arabidopsis thaliana ARF GAP-like zinc fi... 64 4e-07
18gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana... 64 4e-07
19dbj|AK176415.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 64 4e-07
20emb|BX842544.1|CNS0ADXP Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21ref|NM_119415.2| Arabidopsis thaliana unknown protein AT4G32630 ... 50 0.007
22gb|AY735660.1| Arabidopsis thaliana hypothetical protein AT4G326... 50 0.007
23gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 50 0.007
24emb|BX842248.1|CNS09Y3J Arabidopsis thaliana Full-length cDNA Co... 50 0.007
25gb|AY954862.1| Arabidopsis thaliana hypothetical protein (At4g32... 50 0.007
26gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
28gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome... 42 1.6
29gb|AC092903.11| Homo sapiens 3 BAC RP11-666A20 (Roswell Park Can... 42 1.6
30gb|AC009778.11|AC009778 Homo sapiens 12 BAC RP11-103K20 (Roswell... 42 1.6
31dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.6
32dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.6
33gb|AC116612.5| Homo sapiens BAC clone RP13-582L3 from 4, complet... 42 1.6
34gb|AC125073.4| Mus musculus BAC clone RP23-463H17 from chromosom... 40 6.4
35gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, comple... 40 6.4
36gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete s... 40 6.4
37gb|AY145834.1| Xenopus laevis putative chromatin remodelling fac... 40 6.4
38gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence 40 6.4
39gb|AC182249.2| Mus musculus chromosome 3, clone wi1-466K16, comp... 40 6.4
40gb|AC175117.2| Mus musculus chromosome 3, clone wi1-709N8, compl... 40 6.4
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
42ref|XM_223205.3| PREDICTED: Rattus norvegicus PR domain containi... 40 6.4
43dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
44dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
45emb|AL928976.4| Zebrafish DNA sequence from clone CH211-134B16, ... 40 6.4
46gb|AC006925.6|AC006925 Homo sapiens chromosome 17, clone hRPK.81... 40 6.4
47gb|AC123625.22| Mus musculus chromosome 3, clone RP23-227N19, co... 40 6.4
48gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, compl... 40 6.4
49dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.4 
>dbj|AK101729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F19, full
           insert sequence
          Length = 3225

 Score =  547 bits (276), Expect = e-152
 Identities = 426/476 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaagtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacct 60
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 334 gcaagtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggacct 393

                                                                       
Query: 61  ttacatgcttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgt 120
           | | |||||||||||||||||| |||||||| ||||| ||||||||||| || |||||||
Sbjct: 394 tcatatgcttgtcatgcagtggaatacaccgggagtttacccaccgtgtcaagtcagtgt 453

                                                                       
Query: 121 caatggctaaattcactacccaagaagtgcgggctcttgaacagggtggtaaccagcgag 180
           ||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||||
Sbjct: 454 caatggctaaattcactactcaagaagtgcggtctcttgaacagggagggaaccagcgag 513

                                                                       
Query: 181 cacgtgatatctacctaaaagattgggattggcagcgaatgagattgcctgacaacagca 240
           |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 514 cacgtgatatctacctaaaagattgggattggcaacgaatgaggttgcctgacaatagca 573

                                                                       
Query: 241 aaccagagaggataagggaatttatcagaactgtttatatagacaagaagtatgctggtg 300
           | ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 574 atccagacaggataagggaattcatcagagctgtttatgtagacaagaagtatgctggtg 633

                                                                       
Query: 301 cgaagtccaccgacaaaccagccaccgatagtgagagtgtaaagggcaatgaaagtgaaa 360
            ||||||||| |||||||||| ||  |||||||||||||||||| |||  |||| |   |
Sbjct: 634 ggaagtccacggacaaaccagtcaatgatagtgagagtgtaaagagcagcgaaaatctta 693

                                                                       
Query: 361 cgagaagacctgactcctatcattcatactcgcaaagcccaccttatgattttcagtatg 420
           | |||||||||  |||||| ||||| || || |||||||||||||| |||||||| ||||
Sbjct: 694 ctagaagacctagctcctaccattcgtattcccaaagcccaccttacgattttcaatatg 753

                                                                   
Query: 421 aagatagacggtatggtaagcaagttaacacgcttgctcggaggccttcggatagg 476
           |||||||||| |||||||| |||||  |||| ||||| || |||||||| ||||||
Sbjct: 754 aagatagacgatatggtaaacaagtggacacacttgcacgaaggccttcagatagg 809
to top
>ref|NM_191068.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2247

 Score =  202 bits (102), Expect = 7e-49
 Identities = 201/234 (85%)
 Strand = Plus / Plus

                                                                       
Query: 243 ccagagaggataagggaatttatcagaactgtttatatagacaagaagtatgctggtgcg 302
           ||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| |
Sbjct: 163 ccagacaggataagggaattcatcagagctgtttatgtagacaagaagtatgctggtggg 222

                                                                       
Query: 303 aagtccaccgacaaaccagccaccgatagtgagagtgtaaagggcaatgaaagtgaaacg 362
           |||||||| |||||||||| ||  |||||||||||||||||| |||  |||| |   || 
Sbjct: 223 aagtccacggacaaaccagtcaatgatagtgagagtgtaaagagcagcgaaaatcttact 282

                                                                       
Query: 363 agaagacctgactcctatcattcatactcgcaaagcccaccttatgattttcagtatgaa 422
           |||||||||  |||||| ||||| || || |||||||||||||| |||||||| ||||||
Sbjct: 283 agaagacctagctcctaccattcgtattcccaaagcccaccttacgattttcaatatgaa 342

                                                                 
Query: 423 gatagacggtatggtaagcaagttaacacgcttgctcggaggccttcggatagg 476
           |||||||| |||||||| |||||  |||| ||||| || |||||||| ||||||
Sbjct: 343 gatagacgatatggtaaacaagtggacacacttgcacgaaggccttcagatagg 396



 Score =  137 bits (69), Expect = 4e-29
 Identities = 84/89 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaagtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacct 60
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 71  gcaagtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggacct 130

                                        
Query: 61  ttacatgcttgtcatgcagtgggatacac 89
           | | |||||||||||||||||| ||||||
Sbjct: 131 tcatatgcttgtcatgcagtggaatacac 159
to top
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0432B10
          Length = 131918

 Score =  117 bits (59), Expect = 3e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                          
Query: 237    agcaaaccagagaggataagggaatttatcagaactgtttatatagacaagaagtatgct 296
              ||||| ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||
Sbjct: 105538 agcaatccagacaggataagggaattcatcagagctgtttatgtagacaagaagtatgct 105597

                                                     
Query: 297    ggtgcgaagtccaccgacaaaccagccaccgatagtgag 335
              |||| ||||||||| |||||||||| ||  |||||||||
Sbjct: 105598 ggtgggaagtccacggacaaaccagtcaatgatagtgag 105636



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                          
Query: 93     gagttcacccaccgtgttaaatcagtgtcaatggctaaattcactacccaagaagtgcgg 152
              ||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct: 105230 gagtttacccaccgtgtcaagtcagtgtcaatggctaaattcactactcaagaagtgcgg 105289

                                      
Query: 153    gctcttgaacagggtggtaaccag 176
               ||||||||||||| || ||||||
Sbjct: 105290 tctcttgaacagggagggaaccag 105313



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                          
Query: 174    cagcgagcacgtgatatctacctaaaagattgggattggcagcgaatgagattgcctgac 233
              ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 105395 cagcgagcacgtgatatctacctaaaagattgggattggcaacgaatgaggttgcctgac 105454

                
Query: 234    aa 235
              ||
Sbjct: 105455 aa 105456



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                          
Query: 363    agaagacctgactcctatcattcatactcgcaaagcccaccttatgattttcagtatgaa 422
              |||||||||  |||||| ||||| || || |||||||||||||| |||||||| ||||||
Sbjct: 105820 agaagacctagctcctaccattcgtattcccaaagcccaccttacgattttcaatatgaa 105879

                                                                    
Query: 423    gatagacggtatggtaagcaagttaacacgcttgctcggaggccttcggatagg 476
              |||||||| |||||||| |||||  |||| ||||| || |||||||| ||||||
Sbjct: 105880 gatagacgatatggtaaacaagtggacacacttgcacgaaggccttcagatagg 105933



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                          
Query: 26     ggggccacaatatgtatgcaccaatttctggacctttacatgcttgtcatgcagtgggat 85
              |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 104463 ggggccacaatatgtatgtaccaatttctggaccttcatatgcttgtcatgcagtggaat 104522

                 
Query: 86     aca 88
              |||
Sbjct: 104523 aca 104525



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 1      gcaagtgcatcaactgcaacagtgtgg 27
              ||||||||||||| |||||||||||||
Sbjct: 103535 gcaagtgcatcaattgcaacagtgtgg 103561
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 3e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                            
Query: 237      agcaaaccagagaggataagggaatttatcagaactgtttatatagacaagaagtatgct 296
                ||||| ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||
Sbjct: 34608244 agcaatccagacaggataagggaattcatcagagctgtttatgtagacaagaagtatgct 34608303

                                                       
Query: 297      ggtgcgaagtccaccgacaaaccagccaccgatagtgag 335
                |||| ||||||||| |||||||||| ||  |||||||||
Sbjct: 34608304 ggtgggaagtccacggacaaaccagtcaatgatagtgag 34608342



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                            
Query: 93       gagttcacccaccgtgttaaatcagtgtcaatggctaaattcactacccaagaagtgcgg 152
                ||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct: 34607936 gagtttacccaccgtgtcaagtcagtgtcaatggctaaattcactactcaagaagtgcgg 34607995

                                        
Query: 153      gctcttgaacagggtggtaaccag 176
                 ||||||||||||| || ||||||
Sbjct: 34607996 tctcttgaacagggagggaaccag 34608019



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                            
Query: 174      cagcgagcacgtgatatctacctaaaagattgggattggcagcgaatgagattgcctgac 233
                ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 34608101 cagcgagcacgtgatatctacctaaaagattgggattggcaacgaatgaggttgcctgac 34608160

                  
Query: 234      aa 235
                ||
Sbjct: 34608161 aa 34608162



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                            
Query: 363      agaagacctgactcctatcattcatactcgcaaagcccaccttatgattttcagtatgaa 422
                |||||||||  |||||| ||||| || || |||||||||||||| |||||||| ||||||
Sbjct: 34608526 agaagacctagctcctaccattcgtattcccaaagcccaccttacgattttcaatatgaa 34608585

                                                                      
Query: 423      gatagacggtatggtaagcaagttaacacgcttgctcggaggccttcggatagg 476
                |||||||| |||||||| |||||  |||| ||||| || |||||||| ||||||
Sbjct: 34608586 gatagacgatatggtaaacaagtggacacacttgcacgaaggccttcagatagg 34608639



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                            
Query: 26       ggggccacaatatgtatgcaccaatttctggacctttacatgcttgtcatgcagtgggat 85
                |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 34607169 ggggccacaatatgtatgtaccaatttctggaccttcatatgcttgtcatgcagtggaat 34607228

                   
Query: 86       aca 88
                |||
Sbjct: 34607229 aca 34607231



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 1        gcaagtgcatcaactgcaacagtgtgg 27
                ||||||||||||| |||||||||||||
Sbjct: 34606241 gcaagtgcatcaattgcaacagtgtgg 34606267
to top
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score =  117 bits (59), Expect = 3e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                         
Query: 237   agcaaaccagagaggataagggaatttatcagaactgtttatatagacaagaagtatgct 296
             ||||| ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||
Sbjct: 60261 agcaatccagacaggataagggaattcatcagagctgtttatgtagacaagaagtatgct 60320

                                                    
Query: 297   ggtgcgaagtccaccgacaaaccagccaccgatagtgag 335
             |||| ||||||||| |||||||||| ||  |||||||||
Sbjct: 60321 ggtgggaagtccacggacaaaccagtcaatgatagtgag 60359



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                         
Query: 93    gagttcacccaccgtgttaaatcagtgtcaatggctaaattcactacccaagaagtgcgg 152
             ||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct: 59953 gagtttacccaccgtgtcaagtcagtgtcaatggctaaattcactactcaagaagtgcgg 60012

                                     
Query: 153   gctcttgaacagggtggtaaccag 176
              ||||||||||||| || ||||||
Sbjct: 60013 tctcttgaacagggagggaaccag 60036



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 174   cagcgagcacgtgatatctacctaaaagattgggattggcagcgaatgagattgcctgac 233
             ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 60118 cagcgagcacgtgatatctacctaaaagattgggattggcaacgaatgaggttgcctgac 60177

               
Query: 234   aa 235
             ||
Sbjct: 60178 aa 60179



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                         
Query: 363   agaagacctgactcctatcattcatactcgcaaagcccaccttatgattttcagtatgaa 422
             |||||||||  |||||| ||||| || || |||||||||||||| |||||||| ||||||
Sbjct: 60543 agaagacctagctcctaccattcgtattcccaaagcccaccttacgattttcaatatgaa 60602

                                                                   
Query: 423   gatagacggtatggtaagcaagttaacacgcttgctcggaggccttcggatagg 476
             |||||||| |||||||| |||||  |||| ||||| || |||||||| ||||||
Sbjct: 60603 gatagacgatatggtaaacaagtggacacacttgcacgaaggccttcagatagg 60656



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                         
Query: 26    ggggccacaatatgtatgcaccaatttctggacctttacatgcttgtcatgcagtgggat 85
             |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 59186 ggggccacaatatgtatgtaccaatttctggaccttcatatgcttgtcatgcagtggaat 59245

                
Query: 86    aca 88
             |||
Sbjct: 59246 aca 59248



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 1     gcaagtgcatcaactgcaacagtgtgg 27
             ||||||||||||| |||||||||||||
Sbjct: 58258 gcaagtgcatcaattgcaacagtgtgg 58284
to top
>gb|BT013593.1| Lycopersicon esculentum clone 132356R, mRNA sequence
          Length = 2645

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 12  aactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgcttg 71
           ||||| || ||| |||||||||||||||| ||||| ||||||||||| |||   |||   
Sbjct: 166 aactgtaatagtttggggccacaatatgtttgcactaatttctggacatttgtttgcaca 225

                                                                       
Query: 72  tcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatggctaaa 131
            ||||||||||  ||||||| |||||||||||  | || |||||||| || |||||||||
Sbjct: 226 acatgcagtggtttacaccgggagttcacccatagagtgaaatcagtatccatggctaaa 285

             
Query: 132 tt 133
           ||
Sbjct: 286 tt 287
to top
>ref|XM_464580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2963

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5   gtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctt 61
           ||||||||||||||||| | |||| ||||||||||| || || ||||||||||||||
Sbjct: 309 gtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggacctt 365
to top
>ref|XM_464581.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3068

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5   gtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctt 61
           ||||||||||||||||| | |||| ||||||||||| || || ||||||||||||||
Sbjct: 271 gtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggacctt 327
to top
>dbj|AK121183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M01, full
           insert sequence
          Length = 2961

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5   gtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctt 61
           ||||||||||||||||| | |||| ||||||||||| || || ||||||||||||||
Sbjct: 307 gtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggacctt 363
to top
>dbj|AK070031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F08, full
           insert sequence
          Length = 1986

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5   gtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctt 61
           ||||||||||||||||| | |||| ||||||||||| || || ||||||||||||||
Sbjct: 271 gtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggacctt 327
to top
>dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F05, full
           insert sequence
          Length = 3068

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5   gtgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctt 61
           ||||||||||||||||| | |||| ||||||||||| || || ||||||||||||||
Sbjct: 271 gtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggacctt 327
to top
>ref|NM_001035925.1| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.3 mRNA, complete cds
          Length = 2566

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 623 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 674



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 259 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 318

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 319 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 375
to top
>ref|NM_100741.3| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.2 mRNA, complete cds
          Length = 2741

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 660 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 711



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 296 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 355

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 356 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 412
to top
>ref|NM_180610.2| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.1 mRNA, complete cds
          Length = 2744

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 660 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 711



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 296 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 355

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 356 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 412
to top
>gb|BT008398.1| Arabidopsis thaliana At1g08690 gene, complete cds
          Length = 1947

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 446 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 497



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 82  atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 141

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 142 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 198
to top
>gb|AY081303.1| Arabidopsis thaliana unknown protein (At1g08690) mRNA, complete cds
          Length = 2392

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 660 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 711



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 296 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 355

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 356 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 412
to top
>gb|AF184145.1|AF184145 Arabidopsis thaliana ARF GAP-like zinc finger-containing protein
           ZiGA4 mRNA, complete cds
          Length = 2325

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 599 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 650



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 235 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 294

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 295 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 351
to top
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 373   actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
             ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 63016 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 63067
to top
>dbj|AK176415.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-14-I23
          Length = 2243

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||
Sbjct: 623 actcctatcattcttactcccaaagccctccttacgattatcagtatgaaga 674



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | ||||||||||||   ||||
Sbjct: 259 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccttcgtatgc 318

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 319 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 375
to top
>emb|BX842544.1|CNS0ADXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS69ZG01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2358

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 373 actcctatcattcatactcgcaaagcccaccttatgattttcagtatgaaga 424
           ||||||||||||| ||||| |||||||| ||||| |||| | ||||||||||
Sbjct: 660 actcctatcattcttactcccaaagccctccttacgattatgagtatgaaga 711



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 81  gggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
           |||||||||||||| ||||| || ||||| | ||| |||||||||
Sbjct: 368 gggatacaccgcgaattcactcatcgtgtgagatctgtgtcaatg 412
to top
>ref|NM_119415.2| Arabidopsis thaliana unknown protein AT4G32630 mRNA, complete cds
          Length = 2352

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 6   tgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggac 58
           |||||||| ||||| ||| |||| ||||||||||||||| | | |||||||||
Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
to top
>gb|AY735660.1| Arabidopsis thaliana hypothetical protein AT4G32630 mRNA, complete
           cds
          Length = 2387

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 6   tgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggac 58
           |||||||| ||||| ||| |||| ||||||||||||||| | | |||||||||
Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
to top
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 30    ccacaatatgtatgcaccaatttctggac 58
             ||||||||||||||||| |||||||||||
Sbjct: 28001 ccacaatatgtatgcacaaatttctggac 27973
to top
>emb|BX842248.1|CNS09Y3J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS86ZB11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 792

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 94/117 (80%)
 Strand = Plus / Plus

                                                                       
Query: 9   atcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggacctttacatgc 68
           ||||||||||| ||  | || || |||||||| ||||| | |||||||||| |   ||||
Sbjct: 289 atcaactgcaatagccttggccctcaatatgtttgcacaactttctggaccgtcgtatgc 348

                                                                    
Query: 69  ttgtcatgcagtgggatacaccgcgagttcacccaccgtgttaaatcagtgtcaatg 125
            || | || || |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 349 atggcttgtagcgggatacaccgcgaattcactcatcgtgtgaaatctgtgtcaatg 405



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                
Query: 373 actcctatcattcatactcgcaaagcccacct-tatgattttcagtatgaaga 424
           ||||||||||||| |||||| ||||||| | | || |||| ||||||||||||
Sbjct: 653 actcctatcattcttactcggaaagccctcgtctacgattatcagtatgaaga 705
to top
>gb|AY954862.1| Arabidopsis thaliana hypothetical protein (At4g32630) mRNA,
           complete cds
          Length = 1884

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 6   tgcatcaactgcaacagtgtggggccacaatatgtatgcaccaatttctggac 58
           |||||||| ||||| ||| |||| ||||||||||||||| | | |||||||||
Sbjct: 67  tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 119
to top
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 93    gagttcacccaccgtgttaaatcagtgtcaatggctaaattcactacccaagaagt 148
             |||||||| || ||||| |||||| | |||||||||||||| ||| | ||||||||
Sbjct: 47165 gagttcactcatcgtgtaaaatcaatatcaatggctaaatttacttctcaagaagt 47220
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 93       gagttcacccaccgtgttaaatcagtgtcaatggctaaattcactacccaagaagt 148
                |||||||| || ||||| |||||| | |||||||||||||| ||| | ||||||||
Sbjct: 26349812 gagttcactcatcgtgtaaaatcaatatcaatggctaaatttacttctcaagaagt 26349867
to top
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence
          Length = 179650

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   agaactgtttatatagacaag 287
             |||||||||||||||||||||
Sbjct: 67468 agaactgtttatatagacaag 67488
to top
>gb|AC092903.11| Homo sapiens 3 BAC RP11-666A20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161141

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    cccaccgtgttaaatcagtgt 120
              |||||||||||||||||||||
Sbjct: 106847 cccaccgtgttaaatcagtgt 106867
to top
>gb|AC009778.11|AC009778 Homo sapiens 12 BAC RP11-103K20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 83187

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   gggcaatgaaagtgaaacgag 364
             |||||||||||||||||||||
Sbjct: 54761 gggcaatgaaagtgaaacgag 54741
to top
>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214,
             complete sequence
          Length = 95881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 30    ccacaatatgtatgcaccaatttctggac 58
             ||||||||||| ||||| |||||||||||
Sbjct: 62606 ccacaatatgtgtgcacaaatttctggac 62578
to top
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b,
             complete sequence
          Length = 92148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 30    ccacaatatgtatgcaccaatttctggac 58
             ||||||||||| ||||| |||||||||||
Sbjct: 22325 ccacaatatgtgtgcacgaatttctggac 22297
to top
>gb|AC116612.5| Homo sapiens BAC clone RP13-582L3 from 4, complete sequence
          Length = 96249

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   aactgtttatatagacaagaa 289
             |||||||||||||||||||||
Sbjct: 31634 aactgtttatatagacaagaa 31614
to top
>gb|AC125073.4| Mus musculus BAC clone RP23-463H17 from chromosome 5, complete sequence
          Length = 164030

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ttgggattggcagcgaatga 222
             ||||||||||||||||||||
Sbjct: 24504 ttgggattggcagcgaatga 24523
to top
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence
          Length = 143840

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  ttgggattggcagcgaatga 222
            ||||||||||||||||||||
Sbjct: 9243 ttgggattggcagcgaatga 9224
to top
>gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete sequence
          Length = 135050

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   atgattttcagtatgaagat 425
             ||||||||||||||||||||
Sbjct: 90346 atgattttcagtatgaagat 90327
to top
>gb|AY145834.1| Xenopus laevis putative chromatin remodelling factor BAZ2A mRNA,
            complete cds
          Length = 5590

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  tgaaagtgaaacgagaagac 369
            ||||||||||||||||||||
Sbjct: 4224 tgaaagtgaaacgagaagac 4243
to top
>gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence
          Length = 163237

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    actgcaacagtgtggggcca 32
             ||||||||||||||||||||
Sbjct: 88709 actgcaacagtgtggggcca 88690
to top
>gb|AC182249.2| Mus musculus chromosome 3, clone wi1-466K16, complete sequence
          Length = 45364

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 ataagggaatttatcagaac 271
           ||||||||||||||||||||
Sbjct: 348 ataagggaatttatcagaac 329
to top
>gb|AC175117.2| Mus musculus chromosome 3, clone wi1-709N8, complete sequence
          Length = 40863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ataagggaatttatcagaac 271
             ||||||||||||||||||||
Sbjct: 13525 ataagggaatttatcagaac 13506
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 30      ccacaatatgtatgcaccaatttctggacctt 61
               ||||||||||| || || ||||||||||||||
Sbjct: 6111940 ccacaatatgtctgtacaaatttctggacctt 6111971
to top
>ref|XM_223205.3| PREDICTED: Rattus norvegicus PR domain containing 8 (predicted)
           (Prdm8_predicted), mRNA
          Length = 4026

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 ttgggattggcagcgaatga 222
           ||||||||||||||||||||
Sbjct: 435 ttgggattggcagcgaatga 454
to top
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 30    ccacaatatgtatgcaccaatttctggacctt 61
             ||||||||||| || || ||||||||||||||
Sbjct: 77422 ccacaatatgtctgtacaaatttctggacctt 77453
to top
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1003_F05
          Length = 147472

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 30     ccacaatatgtatgcaccaatttctggacctt 61
              ||||||||||| || || ||||||||||||||
Sbjct: 132779 ccacaatatgtctgtacaaatttctggacctt 132810
to top
>emb|AL928976.4| Zebrafish DNA sequence from clone CH211-134B16, complete sequence
          Length = 173937

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   ttgcctgacaacagcaaacc 244
             ||||||||||||||||||||
Sbjct: 20030 ttgcctgacaacagcaaacc 20011
to top
>gb|AC006925.6|AC006925 Homo sapiens chromosome 17, clone hRPK.81_I_9, complete sequence
          Length = 176186

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    tgatatctacctaaaagatt 204
              ||||||||||||||||||||
Sbjct: 120142 tgatatctacctaaaagatt 120123
to top
>gb|AC123625.22| Mus musculus chromosome 3, clone RP23-227N19, complete sequence
          Length = 229546

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    ataagggaatttatcagaac 271
              ||||||||||||||||||||
Sbjct: 228548 ataagggaatttatcagaac 228529



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    ataagggaatttatcagaac 271
              ||||||||||||||||||||
Sbjct: 195186 ataagggaatttatcagaac 195205
to top
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence
          Length = 195911

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    gcaaaccagagaggataagg 257
              ||||||||||||||||||||
Sbjct: 117246 gcaaaccagagaggataagg 117227
to top
>dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-286N3, complete
             sequence
          Length = 213005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   accagagaggataagggaatttat 265
             |||||||||||||||| |||||||
Sbjct: 74863 accagagaggataaggaaatttat 74840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,364,356
Number of Sequences: 3902068
Number of extensions: 3364356
Number of successful extensions: 59060
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58889
Number of HSP's gapped (non-prelim): 169
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top