ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal3o06 |
|---|---|
| Clone Library Name | barley_pub |
>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit beta-4) Length = 212 Score = 130 bits (326), Expect(2) = 1e-30 Identities = 65/75 (86%), Positives = 69/75 (92%) Frame = +1 Query: 49 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKD 228 I+KGAFGYGSYFCLSLMDKLY PDM+VEEAVDLVDKCIKEIRLRLVVAPQNF IKIVDK+ Sbjct: 126 IEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVDKE 185 Query: 229 GARDYARREIGGDSP 273 GAR+YARR DSP Sbjct: 186 GAREYARRAY-TDSP 199 Score = 22.3 bits (46), Expect(2) = 1e-30 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +2 Query: 11 MYYIDYIAT 37 +YYIDYIAT Sbjct: 114 LYYIDYIAT 122
>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-1) (Proteasome component GB) Length = 204 Score = 110 bits (275), Expect(2) = 3e-25 Identities = 54/73 (73%), Positives = 60/73 (82%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 216 T +DKGAFGYGSYF LS MD+ Y DM+VEEA++LVDKCI EIR RLVVAP NF IKI Sbjct: 122 TLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKI 181 Query: 217 VDKDGARDYARRE 255 VDKDGARDYA R+ Sbjct: 182 VDKDGARDYAWRQ 194 Score = 23.9 bits (50), Expect(2) = 3e-25 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2 Query: 11 MYYIDYIATL 40 +YYIDYIATL Sbjct: 114 LYYIDYIATL 123
>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-2) (Proteasome component GA) Length = 199 Score = 106 bits (264), Expect(2) = 5e-24 Identities = 51/72 (70%), Positives = 58/72 (80%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 216 T +DKGAFGYGSYF LS MD+ Y DM+VEEA++LVDKCI EIR RLV+AP NF IKI Sbjct: 122 TLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKI 181 Query: 217 VDKDGARDYARR 252 VDKDGAR+Y R Sbjct: 182 VDKDGAREYGWR 193 Score = 23.9 bits (50), Expect(2) = 5e-24 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2 Query: 11 MYYIDYIATL 40 +YYIDYIATL Sbjct: 114 LYYIDYIATL 123
>PSB2_SCHPO (Q09720) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 194 Score = 64.3 bits (155), Expect = 2e-10 Identities = 26/68 (38%), Positives = 43/68 (63%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 216 T + GY S++CLS+ D+ Y PD+T++EAV ++ C E++ R+ + + F K+ Sbjct: 124 TCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFICKV 183 Query: 217 VDKDGARD 240 VDKDG R+ Sbjct: 184 VDKDGIRE 191
>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit| C11) (Proteinase YSCE subunit 11) (Multicatalytic endopeptidase complex subunit C11) Length = 198 Score = 62.4 bits (150), Expect = 6e-10 Identities = 28/67 (41%), Positives = 41/67 (61%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 216 T + GA GY ++ SL+D Y PDMT EE +DL+ C++E+ R+ + + +KI Sbjct: 124 TKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKI 183 Query: 217 VDKDGAR 237 VDKDG R Sbjct: 184 VDKDGIR 190
>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 58.5 bits (140), Expect(2) = 4e-09 Identities = 23/60 (38%), Positives = 43/60 (71%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 240 A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F+++I+DK+G D Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHD 190 Score = 21.2 bits (43), Expect(2) = 4e-09 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +2 Query: 11 MYYIDYIATLPQXSTREH 64 +YY+DY+A L + H Sbjct: 115 LYYMDYLAALAKAPFAAH 132
>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 58.2 bits (139), Expect(2) = 5e-09 Identities = 22/57 (38%), Positives = 42/57 (73%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 231 A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F+++++DKDG Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187 Score = 21.2 bits (43), Expect(2) = 5e-09 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +2 Query: 11 MYYIDYIATLPQXSTREH 64 +YY+DY+A L + H Sbjct: 115 LYYMDYLAALAKAPFAAH 132
>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 58.2 bits (139), Expect(2) = 5e-09 Identities = 22/57 (38%), Positives = 42/57 (73%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 231 A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F+++++DKDG Sbjct: 131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187 Score = 21.2 bits (43), Expect(2) = 5e-09 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +2 Query: 11 MYYIDYIATLPQXSTREH 64 +YY+DY+A L + H Sbjct: 115 LYYMDYLAALAKAPFAAH 132
>PSB2_NEUCR (Q9P6U7) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 203 Score = 58.9 bits (141), Expect = 7e-09 Identities = 24/60 (40%), Positives = 39/60 (65%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 240 A GY Y+CLS++DK +HPD+T+ + + L++ C E++ RL + + +K V KDG D Sbjct: 132 AHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTKDGIID 191
>PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome subunit beta-4) Length = 206 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/75 (33%), Positives = 45/75 (60%) Frame = +1 Query: 7 SHVLH*LHRDTATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLV 186 +H+ + + T + G GYG+ F +++D+++ P++T +E V+L+ KC E+ R+V Sbjct: 124 AHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVV 183 Query: 187 VAPQNFAIKIVDKDG 231 V+ F K V KDG Sbjct: 184 VSNNTFICKAVPKDG 198
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 54.3 bits (129), Expect = 2e-07 Identities = 23/66 (34%), Positives = 41/66 (62%) Frame = +1 Query: 40 ATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIV 219 A I+ G+GS FC S++ + ++ ++ E+A L+ KC+ EI+ RL++ +NF + +V Sbjct: 126 AQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVV 185 Query: 220 DKDGAR 237 D G R Sbjct: 186 DSKGMR 191
>PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| subunit beta 4) Length = 199 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = +1 Query: 67 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGAR 237 G+ FC ++MD+ Y DMT E + L++KCI E + R V + + I+DK G R Sbjct: 136 GFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYR 192
>PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 224 Score = 47.0 bits (110), Expect = 3e-05 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 216 T + A G G Y LS MDK ++ DM +E VDL+ KCI E RL + +F + Sbjct: 124 TKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFNCIL 182 Query: 217 VDKDG 231 +DK+G Sbjct: 183 IDKNG 187
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 39.3 bits (90), Expect = 0.006 Identities = 22/66 (33%), Positives = 34/66 (51%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 240 A G G L + ++ Y DMT++EA++L + + E R N I +VDK G R Sbjct: 166 AIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEAS-REETTADNLEIAVVDKQGFRK 224 Query: 241 YARREI 258 R++I Sbjct: 225 LERKKI 230
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 34.3 bits (77), Expect = 0.19 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 240 A G GS +++ Y DM+VEE + L +K R + ++ ++ KDG + Sbjct: 135 ATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKI 194 Query: 241 YARREI 258 + EI Sbjct: 195 FEDEEI 200
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 33.5 bits (75), Expect = 0.32 Identities = 17/61 (27%), Positives = 33/61 (54%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARD 240 A G GS +S+++ Y PD+ EA++LV + I+ + + N + ++D++ A Sbjct: 161 ALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATP 220 Query: 241 Y 243 Y Sbjct: 221 Y 221
>PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 7) (20S proteasome beta subunit G-1) (Proteasome component H) Length = 246 Score = 32.3 bits (72), Expect = 0.71 Identities = 15/60 (25%), Positives = 32/60 (53%) Frame = +1 Query: 52 DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 231 D A G+G++ ++ +H D++ E+ V L++KC++ + R A I + ++G Sbjct: 158 DHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIAKITEEG 217
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 67 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 180 G GS + +MD+ Y D+ VEEA DL + I + R Sbjct: 133 GSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYR 170
>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome subunit alpha-5) Length = 246 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +1 Query: 37 TATXIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 171 T T D A G G+ ++ + YH +MTVEEA +L + ++++ Sbjct: 161 TYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQV 205
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 67 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 180 G GS + +MD+ Y D+ VEEA DL + I + R Sbjct: 133 GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYR 170
>FASTK_HUMAN (Q14296) Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST| kinase) Length = 549 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -1 Query: 142 LPLPRQSCQGGTTCPSATNRSTTRTQMLPCRXLWQ-CRD 29 LP P +SC G SAT R + +L R W CRD Sbjct: 452 LPYPPRSCPQGQAASSATTRDPAQRVVLVLRERWHFCRD 490
>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 242 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTV--EEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDG 231 A G+G+Y L+ ++ T+ EEA LVD+C+K + R + F I V + G Sbjct: 161 ATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEITTVTESG 219
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 67 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 180 G GS F +++ Y MTV+E VDLV + I + R Sbjct: 136 GSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQR 173
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = +1 Query: 67 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARDYA 246 G GS + ++D Y DMTVEEA +L + I R + ++ V DG + Sbjct: 184 GSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVT 243 Query: 247 RREIG 261 ++G Sbjct: 244 GDDVG 248
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 52 DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 180 D+ + G GS + ++D Y DM+VEEA +L + I R Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFR 223
>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 247 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 171 A G GS S + K +H DMT+EEA L+ K ++++ Sbjct: 170 AIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQV 206
>Y244_BUCAP (Q8K9R6) UPF0125 protein BUsg244| Length = 95 Score = 29.3 bits (64), Expect = 6.0 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = -2 Query: 489 FFNHEKGVINRLVHAWENLQHSSQTETYCDYIV 391 F+ + G+ N+LVH EN+++ + E Y + I+ Sbjct: 47 FYKNNVGIYNKLVHLNENVKNGDRIEIYRNLII 79
>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 244 Score = 29.3 bits (64), Expect = 6.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 61 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 171 A G GS + L+ PD+T++EA+D+ +K++ Sbjct: 171 AIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQV 207
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 52 DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 180 D+ + G GS + ++D Y DM+VEEA +L + I R Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFR 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,286,123 Number of Sequences: 219361 Number of extensions: 1198116 Number of successful extensions: 3628 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3511 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3627 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
