ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal3n20 |
|---|---|
| Clone Library Name | barley_pub |
>YDQ4_SCHPO (O14197) Hypothetical protein C5D6.04 in chromosome I| Length = 452 Score = 56.6 bits (135), Expect = 7e-08 Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 6/176 (3%) Frame = +1 Query: 94 SVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLG 273 +V S+L+ + +V + G+++A K L + +K+++ L PCL+F ++G Sbjct: 11 NVWSLLRPIIESDLEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVG 68 Query: 274 SAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPL 453 + + L+ L+ +PV V+ + + LI F++A + R F PL Sbjct: 69 NGLNLKMLIDLSLLPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPL 128 Query: 454 VLIAALCRDPSN------PFGDSEKCSQDGNAYISFGQWVGAIIVYTYVFKMLSPP 603 L+++L + P +K + G Y+ +G + ++Y +++L P Sbjct: 129 ALVSSLATTVKDLLWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSP 184
>YB8B_YEAST (P38355) Protein YBR287W| Length = 427 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 7/182 (3%) Frame = +1 Query: 88 DTSVLSMLKYAVLP-IAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFS 264 +T + L Y V + +V + GF A+ +L +K+++ L L PCLIFS Sbjct: 3 ETFSFAHLAYLVFESVLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFS 60 Query: 265 QLGSAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXX 444 +L ++++ K+ + IP+ + + G +++ I+ F V Sbjct: 61 KLAKSLSMAKIFEIAIIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNS 120 Query: 445 XPLVLIAALCRDPSN------PFGDSEKCSQDGNAYISFGQWVGAIIVYTYVFKMLSPPP 606 P+ L +L N P + + + G Y+ Q +G ++ +++ + L Sbjct: 121 LPVSLTLSLAYTLPNLTWDQIPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKLMKWS 180 Query: 607 GE 612 GE Sbjct: 181 GE 182
>ECM3_YEAST (Q99252) Extracellular matrix protein 3| Length = 613 Score = 39.7 bits (91), Expect = 0.009 Identities = 24/91 (26%), Positives = 48/91 (52%) Frame = +1 Query: 118 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 297 +V PI K++ + +GF + +NIL + ++ +V ++LLPCL F+++ + I + Sbjct: 13 SVRPIIKIYLIIGVGFGLCK--MNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDI 70 Query: 298 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPP 390 I + V+ +G F+V S++ P Sbjct: 71 KDVGIICLTSVILFATGLGFAFIVRSVLPVP 101
>YNJ5_YEAST (P53932) Hypothetical 71.2 kDa protein in RPS7B-YPT53 intergenic| region Length = 642 Score = 37.7 bits (86), Expect = 0.033 Identities = 24/95 (25%), Positives = 51/95 (53%) Frame = +1 Query: 118 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 297 +V PI K++ + +GFLMA + IL ++++ +V ++LLP L F+++ + I + + Sbjct: 13 SVKPIIKIYLIIGVGFLMAK--MGILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKDI 70 Query: 298 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYF 402 I ++ ++ SG +VV + P ++ Sbjct: 71 KSVGIICLSALLIFGSGFFFAYVVRLFLPVPKQWY 105
>YL152_YEAST (P54072) Protein YLR152C| Length = 576 Score = 37.4 bits (85), Expect = 0.043 Identities = 18/56 (32%), Positives = 36/56 (64%) Frame = +1 Query: 118 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAIT 285 A+ PI K++T+ +G+L+A +I+ K ++ +V + +LPCL F+++ S I+ Sbjct: 12 ALKPIFKIYTIMLVGYLVAK--FDIVSMENAKGISNMVVNAILPCLTFNKIVSNIS 65
>UDA1_RAT (P36510) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| (UDPGT) (UGT-OLF) Length = 527 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W RY +P + N++L WI ++D H K Sbjct: 322 IASALAQIPQKVLW----------RYKGKIPATLGSNTRLFDWIPQNDLLGHPKTRAFIT 371 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY IP + + +D+ + KA+ Sbjct: 372 HGGTNGIYEAIYHGIPMVGVPMFADQPDNIAHMKAK 407
>UDC1_RABIT (P36514) UDP-glucuronosyltransferase 2C1 (EC 2.4.1.17) (UDPGT)| (Fragment) Length = 502 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W RY P + N++L WI ++D H K Sbjct: 297 IASALAQIPQKVLW----------RYTGKKPATLGPNTRLFEWIPQNDLLGHPKTRAFIT 346 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY +P + L D+ + + KA+ Sbjct: 347 HGGTNGLYEAIYHGVPMVGIPLFGDQPDNIARVKAK 382
>UDB7_HUMAN (P16662) UDP-glucuronosyltransferase 2B7 precursor (EC 2.4.1.17)| (UDPGT) (3,4-catechol estrogen specific) (UDPGTh-2) Length = 529 Score = 34.7 bits (78), Expect = 0.28 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 324 IASALAQIPQKVLW----------RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY IP + L +D+ + KAR Sbjct: 374 HGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR 409
>UDB4_HUMAN (P06133) UDP-glucuronosyltransferase 2B4 precursor (EC 2.4.1.17)| (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) Length = 528 Score = 34.3 bits (77), Expect = 0.36 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 324 IASALAKIPQKVLW----------RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY IP + L +D+ + KA+ Sbjct: 374 HGGANGIYEAIYHGIPMVGVPLFADQPDNIAHMKAK 409
>UDB33_MACMU (Q9GLD9) UDP-glucuronosyltransferase 2B33 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 33.1 bits (74), Expect = 0.80 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 324 IASALAQIPQKVLW----------RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY +P + L +D+ + K R Sbjct: 374 HGGANGIYEAIYHGVPMVGIPLFADQPDNIAHMKTR 409
>UDB23_MACFA (Q9TSL6) UDP-glucuronosyltransferase 2B23 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 33.1 bits (74), Expect = 0.80 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 324 IASALAQIPQKVLW----------RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY +P + L +D+ + K R Sbjct: 374 HGGANGIYEAIYHGVPMVGIPLFADQPDNIAHMKTR 409
>UDA1_HUMAN (Q9Y4X1) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| Length = 527 Score = 33.1 bits (74), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W RY P + +N++L WI ++D H K Sbjct: 322 IASALAQIPQKVLW----------RYKGKKPATLGNNTQLFDWIPQNDLLGHPKTKAFIT 371 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY +P + + +D+ + KA+ Sbjct: 372 HGGTNGIYEAIYHGVPMVGVPMFADQPDNIAHMKAK 407
>UDB11_HUMAN (O75310) UDP-glucuronosyltransferase 2B11 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 324 IATALAKIPQKVLW----------RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY IP + L D+ + KA+ Sbjct: 374 HGGANGIYEAIYHGIPMVGIPLFFDQPDNIAHMKAK 409
>UDB10_HUMAN (P36537) UDP-glucuronosyltransferase 2B10 precursor (EC 2.4.1.17)| (UDPGT) Length = 528 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I A ++P+++ W R+ N P + N++L WI ++D H K Sbjct: 323 IATALAKIPQKVLW----------RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFIT 372 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY IP + L D+ + KA+ Sbjct: 373 HGGANGIYEAIYHGIPMVGIPLFFDQPDNIAHMKAK 408
>UDB18_MACFA (O97951) UDP-glucuronosyltransferase 2B18 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 30.8 bits (68), Expect = 4.0 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----N 355 I +A ++P+++ W R+ P + N++L WI ++D H K Sbjct: 324 IASALAQIPQKVLW----------RFDGKKPDTLGLNTRLYKWIPQNDLLGHPKTRAFIT 373 Query: 354 QGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 247 G +G Y IY +P + L +D+ + KA+ Sbjct: 374 HGGSNGIYEAIYHGVPMVGIPLFADQPDNIAHMKAK 409
>UDB8_RAT (Q62789) UDP-glucuronosyltransferase 2B8 precursor (EC 2.4.1.17)| (UDPGT) (UGT2B-RH4) Length = 530 Score = 30.8 bits (68), Expect = 4.0 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Frame = -2 Query: 525 SILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKANQGS 346 +I +A ++P+++ W R+ P + N+++ WI ++D H K Sbjct: 324 TIASALAQIPQKVFW----------RFEGKKPDTLGPNTRVFKWIPQNDLLGHPKTKAFV 373 Query: 345 RHGTYNNIY----WNIPPL 301 HG N IY + IPP+ Sbjct: 374 THGGANGIYESIHYGIPPM 392
>Y762_METJA (Q58172) Hypothetical protein MJ0762| Length = 342 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 229 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 357 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 119 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 160
>Y576_METJA (Q57996) Hypothetical protein MJ0576| Length = 347 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 229 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 357 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 126 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 167
>Y1031_METJA (Q58437) Hypothetical protein MJ1031| Length = 308 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/69 (20%), Positives = 36/69 (52%) Frame = +1 Query: 175 TKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKLVQWWYIPVNIVVGAVSGSL 354 +K IL+ K+LN +V + +P IF + ++ +++++ +PV I + + + Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79 Query: 355 IGFVVASII 381 + +++ I Sbjct: 80 LAYLLGKHI 88
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 30.0 bits (66), Expect = 6.8 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -1 Query: 628 LHHQRSLLVVEKAS*THMCKQ*SHQPIDQMKY-THFHLGCIFQSPQKDWMGPD 473 L H++ LLV ++ ++ KQ Q ++Q + F L C+ P+KDW D Sbjct: 735 LIHEKHLLVRRESELIYVFKQ---QNLEQRQADVEFELRCLLNKPEKDWTDED 784
>UDB1_RAT (P09875) UDP-glucuronosyltransferase 2B1 precursor (EC 2.4.1.17)| (UDPGT) (UDPGTr-2) Length = 529 Score = 29.6 bits (65), Expect = 8.9 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKAN---- 355 + +A ++P+++ W R+ P + N++L WI ++D H K Sbjct: 325 VASALAQIPQKVVW----------RFDGKKPDTLGSNTRLYKWIPQNDLLGHPKTKAFVA 374 Query: 354 QGSRHGTYNNIYWNIP 307 G +G Y IY IP Sbjct: 375 HGGTNGIYEAIYHGIP 390
>VP5_AHSV4 (Q02168) Outer capsid protein VP5| Length = 505 Score = 29.6 bits (65), Expect = 8.9 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +2 Query: 461 LQHYVGTHPILLGTLKNAAKMEMRIFHLVNGLVRLLFTH----MCSRCFLHHQERPLM 622 LQ +GTHPI +G++ A E LV+ +RL++ C R L Q R LM Sbjct: 442 LQRSMGTHPIYMGSMDYAISYE----QLVSNAMRLVYDSELQMHCLRGPLKFQRRTLM 495
>UDB14_RABIT (P36513) UDP-glucuronosyltransferase 2B14 precursor (EC 2.4.1.17)| (UDPGT) (EGT12) Length = 530 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = -2 Query: 522 ILAAFFRVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKANQGSR 343 I +AF ++P+++ W R+ P + N+++ WI ++D H K Sbjct: 325 IASAFAQLPQKVIW----------RFDGQKPETLGPNTRIYDWIPQNDLLGHPKTKAFVT 374 Query: 342 HGTYNNIY 319 HG N IY Sbjct: 375 HGGANGIY 382
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 29.6 bits (65), Expect = 8.9 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 12/116 (10%) Frame = +1 Query: 55 ALVTAAQGGSTDTSVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNI-----LQPNGRK-- 213 ALV A+ L+ + Y ++ + VC + L AT + I ++P +K Sbjct: 305 ALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQL 364 Query: 214 LLNGLVFSLLLPCLIFSQLGSAITL-----EKLVQWWYIPVNIVVGAVSGSLIGFV 366 +++ ++ ++ + + F L ++ T+ +K V+ W + + + VG +G +IGFV Sbjct: 365 VISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFV 420 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,943,185 Number of Sequences: 219361 Number of extensions: 2052044 Number of successful extensions: 6322 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 6094 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6318 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
