>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 15/91 (16%)
 Frame = +1

Query: 217  EIADPVIKDKAAMPVLKKDKNPKS---------------SGPAKRKRTPTLEDEKAMPYK 351
            E+  P  K+K+     KK+K+P S                 P K++++P   ++   P K
Sbjct: 1426 EVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVK 1485

Query: 352  SEKLQNDSTVIDMGPPADWVKINVRRTVSIS 444
             EK  + + ++++       K     T  ++
Sbjct: 1486 KEKSPDATNIVEVSSETTIEKTETTMTTEMT 1516

>EF1G1_ARATH (O04487) Probable elongation factor 1-gamma 1 (EF-1-gamma 1)|
           (eEF-1B gamma 1)
          Length = 414

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = +1

Query: 217 EIADPVIKDKAAMPVLKKDKNPKSSGPAKRKRTPTLEDEKAMPYKSEKLQNDSTVIDMGP 396
           E   P+   KAA P   K++  K   P      P L +E+  P    K       +D+ P
Sbjct: 210 EAVPPIASKKAAQPAKPKEEPKKKEAPV--AEAPKLAEEEEAPKPKAK-----NPLDLLP 262

Query: 397 PADWVKINVRRTVSISFSKYKIVS 468
           P+  V  + +R  S + S ++ V+
Sbjct: 263 PSPMVLDDWKRLYSNTKSNFREVA 286

>PP28_HCMVA (P13200) Tegument protein UL99 (28 kDa structural phosphoprotein)|
           (PP28)
          Length = 189

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +1

Query: 238 KDKAAMPVLKKDKNPKSSGPAKRKRTPTL---EDEKAMPYKSEKLQNDSTVIDMGPP 399
           K  A     ++DK PK S  +K+K+ P+      + ++  +++ L  + T I + PP
Sbjct: 89  KKNAVRSTFREDKAPKPSKQSKKKKKPSKHHHHQQSSIMQETDDLDEEDTSIYLSPP 145

>EF1G2_ARATH (Q9FVT2) Probable elongation factor 1-gamma 2 (EF-1-gamma 2)|
           (eEF-1B gamma 2)
          Length = 413

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +1

Query: 196 QRLLGNG---EIADPVIKDKAAMPVLKKDKNPKSSGPAKRKRTPTLEDEKAMPYKSEKLQ 366
           +++LG+    E   PV   KA  P   K++ PK + P      P  E+E   P    K +
Sbjct: 200 KKVLGDAKQTEAVPPVPTKKAPQPAKPKEE-PKKAAPVAEAPKPAEEEEAPKP----KAK 254

Query: 367 NDSTVIDMGPPADWVKINVRRTVSISFSKYKIVS 468
           N    +D+ PP+  V  + +R  S + S ++ V+
Sbjct: 255 NP---LDLLPPSPMVLDDWKRLYSNTKSNFREVA 285

>UL16_EBV (P03221) Protein BGLF2|
          Length = 336

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
 Frame = -1

Query: 458 LYLENEILTVLRT-FIFTQSAGGPMSITVESFCSFSDLYG----IAFSSSKVXXXXXXXX 294
           +Y+   + TV R   +FT++  GP S+T+  F  FSD  G    +    + V        
Sbjct: 75  VYINGTLATVARPEVLFTKAVQGPHSLTLMYFGVFSDAVGEAVPVEIRGNPVVTCTDLTT 134

Query: 293 XXXXXXXXXFKTGIAALSLITGSAISPL 210
                     KT +  L  IT S I PL
Sbjct: 135 AHVFTTSTAVKT-VEELQDITPSEIIPL 161

>RENT2_HUMAN (Q9HAU5) Regulator of nonsense transcripts 2 (Nonsense mRNA|
           reducing factor 2) (Up-frameshift suppressor 2 homolog)
           (hUpf2)
          Length = 1272

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 295 PAKRKRTPTLEDEKAMPYKSEK-LQNDSTVIDMGPPADWVKINVRRTVS 438
           PA+RK+  ++E++ ++P   EK      TV     P D +K+  ++ VS
Sbjct: 2   PAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVS 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,024,632
Number of Sequences: 219361
Number of extensions: 1625098
Number of successful extensions: 3809
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3805
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)