ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal4b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103949.1| Zea mays PCO103424 mRNA sequence 139 1e-29
2dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 1e-14
4gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 90 1e-14
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
6gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome ... 42 2.1
7gb|AC122729.23| Medicago truncatula clone mth1-62g18, complete s... 42 2.1
8gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, compl... 42 2.1
9gb|AC105177.5| Homo sapiens chromosome 8, clone RP11-91D24, comp... 42 2.1
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
11dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
12gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, co... 42 2.1
13dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.1
14dbj|AP005368.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.1
15gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, com... 40 8.3
16ref|XM_661903.1| Cryptosporidium hominis TU502 hypothetical prot... 40 8.3
17gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete se... 40 8.3
18emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3 40 8.3
19gb|AC021542.8| Homo sapiens chromosome 15, clone RP11-507B12, co... 40 8.3
20ref|XM_626948.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 8.3
21ref|NM_001018499.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.3
22gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, comp... 40 8.3
23gb|AC099489.2| Homo sapiens chromosome 16 clone CTD-3088G3, comp... 40 8.3
24dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 8.3
25emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on ch... 40 8.3
26emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on ch... 40 8.3
27gb|AC161047.2| Mus musculus BAC clone RP24-189I12 from chromosom... 40 8.3

>gb|AY103949.1| Zea mays PCO103424 mRNA sequence
          Length = 1035

 Score =  139 bits (70), Expect = 1e-29
 Identities = 214/262 (81%)
 Strand = Plus / Plus

                                                                       
Query: 243 cagttcttgaggctgtcatctttctcgagtcgatctttcaatctgagaagcgaattgatt 302
           |||| ||||||||||||||   ||| ||||| || |||| ||  || ||||| |||||||
Sbjct: 73  cagtgcttgaggctgtcattcatctagagtcaatttttccatgcgaaaagcgtattgatt 132

                                                                       
Query: 303 tgttagaatcactggtggagaagtttcttacaactgagcagactcaaggggagctggcaa 362
           | ||||| ||||| |||||||||||| ||||| ||||     |||| || ||| ||||||
Sbjct: 133 ttttagactcacttgtggagaagtttgttacacctgaatcatctcagggagaggtggcaa 192

                                                                       
Query: 363 gcttaaacgacaaagaggaattatcttccatatatttagagtttttggatacctttgggg 422
           |  ||   |||||||||||| |||||||||||| ||||||||||||||||  ||||||||
Sbjct: 193 gtctagttgacaaagaggaaatatcttccatatttttagagtttttggatctctttgggg 252

                                                                       
Query: 423 atatacagttgatcaagaaggctacaactcgacatactattctattttcacgtaaaagga 482
           ||  | |||  ||||||||||||  |||||| ||||| | ||| |||||| |||| || |
Sbjct: 253 atgcaaagtcaatcaagaaggctttaactcggcatacaactcttttttcatgtaagagaa 312

                                 
Query: 483 gcattctgccatcaaagaaacg 504
           ||||||||||||||||||||||
Sbjct: 313 gcattctgccatcaaagaaacg 334



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>dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E12, full
            insert sequence
          Length = 2797

 Score =  119 bits (60), Expect = 1e-23
 Identities = 123/144 (85%)
 Strand = Plus / Plus

                                                                        
Query: 27   ttgtgaagcatgctaatatggagcaccggctgggagataaggaatctgcttgtttagttt 86
            |||| |||||| ||||||||||||||||  |||||||||| ||||||||||| | | |||
Sbjct: 1678 ttgttaagcattctaatatggagcaccgattgggagataaagaatctgcttgctcaattt 1737

                                                                        
Query: 87   atgagaaagccattgctgccgaaaaggaaaaggagcagagccagtttttaccaatgctac 146
            ||||||| |||||||| || |||||||||||||| | ||||||| |||| || |   | |
Sbjct: 1738 atgagaaggccattgccgctgaaaaggaaaaggatcggagccagattttgcctactttgc 1797

                                    
Query: 147  tgattcagtactcacgtttcttat 170
            |||||||||||||||| |||||||
Sbjct: 1798 tgattcagtactcacgattcttat 1821



 Score =  113 bits (57), Expect = 7e-22
 Identities = 186/229 (81%)
 Strand = Plus / Plus

                                                                        
Query: 384  tatcttccatatatttagagtttttggatacctttggggatatacagttgatcaagaagg 443
            |||||||||||| ||||||||||||||||   |||||||||  |||   |||||||||||
Sbjct: 2038 tatcttccatatttttagagtttttggatctatttggggatgcacaagcgatcaagaagg 2097

                                                                        
Query: 444  ctacaactcgacatactattctattttcacgtaaaaggagcattctgccatcaaagaaac 503
            |||| | ||| |||  || ||  ||||| || || || ||||| ||| |||||||||| |
Sbjct: 2098 ctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtcatcaaagaagc 2157

                                                                        
Query: 504  gaagagccgatgatgctgttatgtctggtagagataaaatggctaaaaccggagatggca 563
            ||||||| ||||||| | | ||||| |  ||||||||| ||||||  |  || ||||| |
Sbjct: 2158 gaagagctgatgatgttatcatgtcagacagagataaattggctaggattggggatggta 2217

                                                             
Query: 564  cccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 612
            | || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 2218 ctcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 2266



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 269  gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 328
            ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 1923 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 1982

                       
Query: 329  cttacaactga 339
            |||||| ||||
Sbjct: 1983 cttacagctga 1993



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 58      gggagataaggaatctgcttgtttagtttatgagaaagccattgctgccgaaaaggaaaa 117
               ||||||||| ||||||||||| | | |||||||||| |||||||| || |||||||||||
Sbjct: 5731385 gggagataaagaatctgcttgctcaatttatgagaaggccattgccgctgaaaaggaaaa 5731326

                                                                    
Query: 118     ggagcagagccagtttttaccaatgctactgattcagtactcacgtttcttat 170
               ||| | ||||||| |||| || |   | ||||||||||||||||| |||||||
Sbjct: 5731325 ggatcggagccagattttgcctactttgctgattcagtactcacgattcttat 5731273



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 146/180 (81%)
 Strand = Plus / Minus

                                                                           
Query: 433     gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 492
               ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 5730199 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 5730140

                                                                           
Query: 493     atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 552
               ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 5730139 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 5730080

                                                                           
Query: 553     cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 612
                || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 5730079 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 5730020



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 269     gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 328
               ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 5730730 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 5730671

                          
Query: 329     cttacaactga 339
               |||||| ||||
Sbjct: 5730670 cttacagctga 5730660



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 27      ttgtgaagcatgctaatatggagcaccg 54
               |||| |||||| ||||||||||||||||
Sbjct: 5731497 ttgttaagcattctaatatggagcaccg 5731470



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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                         
Query: 58    gggagataaggaatctgcttgtttagtttatgagaaagccattgctgccgaaaaggaaaa 117
             ||||||||| ||||||||||| | | |||||||||| |||||||| || |||||||||||
Sbjct: 99786 gggagataaagaatctgcttgctcaatttatgagaaggccattgccgctgaaaaggaaaa 99845

                                                                  
Query: 118   ggagcagagccagtttttaccaatgctactgattcagtactcacgtttcttat 170
             ||| | ||||||| |||| || |   | ||||||||||||||||| |||||||
Sbjct: 99846 ggatcggagccagattttgcctactttgctgattcagtactcacgattcttat 99898



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 146/180 (81%)
 Strand = Plus / Plus

                                                                          
Query: 433    gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 492
              ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 100972 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 101031

                                                                          
Query: 493    atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 552
              ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 101032 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 101091

                                                                          
Query: 553    cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 612
               || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 101092 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 101151



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 269    gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 328
              ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 100441 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 100500

                         
Query: 329    cttacaactga 339
              |||||| ||||
Sbjct: 100501 cttacagctga 100511



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 27    ttgtgaagcatgctaatatggagcaccg 54
             |||| |||||| ||||||||||||||||
Sbjct: 99674 ttgttaagcattctaatatggagcaccg 99701



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 58      gggagataaggaatctgcttgtttagtttatgagaaagccattgctgccgaaaaggaaaa 117
               ||||||||| ||||||||||| | | |||||||||| |||||||| || |||||||||||
Sbjct: 5730598 gggagataaagaatctgcttgctcaatttatgagaaggccattgccgctgaaaaggaaaa 5730539

                                                                    
Query: 118     ggagcagagccagtttttaccaatgctactgattcagtactcacgtttcttat 170
               ||| | ||||||| |||| || |   | ||||||||||||||||| |||||||
Sbjct: 5730538 ggatcggagccagattttgcctactttgctgattcagtactcacgattcttat 5730486



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 146/180 (81%)
 Strand = Plus / Minus

                                                                           
Query: 433     gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 492
               ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 5729412 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 5729353

                                                                           
Query: 493     atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 552
               ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 5729352 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 5729293

                                                                           
Query: 553     cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 612
                || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 5729292 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 5729233



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 269     gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 328
               ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 5729943 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 5729884

                          
Query: 329     cttacaactga 339
               |||||| ||||
Sbjct: 5729883 cttacagctga 5729873



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 27      ttgtgaagcatgctaatatggagcaccg 54
               |||| |||||| ||||||||||||||||
Sbjct: 5730710 ttgttaagcattctaatatggagcaccg 5730683



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>gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome 3, complete sequence
          Length = 180558

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 533    agagataaaatggctaaaacc 553
              |||||||||||||||||||||
Sbjct: 171770 agagataaaatggctaaaacc 171790



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>gb|AC122729.23| Medicago truncatula clone mth1-62g18, complete sequence
          Length = 82977

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 576   tgggaactgatccaaatgctc 596
             |||||||||||||||||||||
Sbjct: 33427 tgggaactgatccaaatgctc 33447



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>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence
          Length = 229643

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 245    gttcttgaggctgtcatcttt 265
              |||||||||||||||||||||
Sbjct: 155703 gttcttgaggctgtcatcttt 155723



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>gb|AC105177.5| Homo sapiens chromosome 8, clone RP11-91D24, complete sequence
          Length = 149126

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    atgatctgtgacttggaaaag 193
              |||||||||||||||||||||
Sbjct: 100576 atgatctgtgacttggaaaag 100556



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 294     gaattgatttgttagaatcac 314
               |||||||||||||||||||||
Sbjct: 9615327 gaattgatttgttagaatcac 9615307



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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gaattgatttgttagaatcac 314
             |||||||||||||||||||||
Sbjct: 79545 gaattgatttgttagaatcac 79525



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>gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, complete sequence
          Length = 162643

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gttcttgaggctgtcatcttt 265
              |||||||||||||||||||||
Sbjct: 133162 gttcttgaggctgtcatcttt 133142



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>dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1470F2, complete
             sequence
          Length = 164913

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   atgatctgtgacttggaaaag 193
             |||||||||||||||||||||
Sbjct: 47275 atgatctgtgacttggaaaag 47255



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>dbj|AP005368.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB870F5, complete
              sequence
          Length = 111461

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    atgatctgtgacttggaaaag 193
              |||||||||||||||||||||
Sbjct: 109955 atgatctgtgacttggaaaag 109935



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>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence
          Length = 242587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    gaaaaggaaaaggagcagag 126
              ||||||||||||||||||||
Sbjct: 154841 gaaaaggaaaaggagcagag 154860



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>ref|XM_661903.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30455)
           partial mRNA
          Length = 636

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 agccagtttttaccaatgct 144
           ||||||||||||||||||||
Sbjct: 386 agccagtttttaccaatgct 405



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>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence
          Length = 104866

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   aactgatccaaatgctcata 599
             ||||||||||||||||||||
Sbjct: 47531 aactgatccaaatgctcata 47512



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>emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3
          Length = 41181

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   atcactggtggagaagtttc 329
             ||||||||||||||||||||
Sbjct: 16582 atcactggtggagaagtttc 16563



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>gb|AC021542.8| Homo sapiens chromosome 15, clone RP11-507B12, complete sequence
          Length = 80114

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   aaaaggaaaaggagcagagccagt 131
             |||||||||| |||||||||||||
Sbjct: 13839 aaaaggaaaatgagcagagccagt 13862



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>ref|XM_626948.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_4040),
           partial mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 agccagtttttaccaatgct 144
           ||||||||||||||||||||
Sbjct: 407 agccagtttttaccaatgct 426



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>ref|NM_001018499.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPAC23G3.02c), partial mRNA
          Length = 14775

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 atcactggtggagaagtttc 329
           ||||||||||||||||||||
Sbjct: 157 atcactggtggagaagtttc 176



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>gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, complete sequence
          Length = 204540

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    aattgatttgttagaatcactggt 318
              ||||||||| ||||||||||||||
Sbjct: 195311 aattgatttcttagaatcactggt 195334



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>gb|AC099489.2| Homo sapiens chromosome 16 clone CTD-3088G3, complete sequence
          Length = 204493

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    cttggaaaaggcaagggagg 203
              ||||||||||||||||||||
Sbjct: 110259 cttggaaaaggcaagggagg 110240



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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      cattgctgccgaaaaggaaa 116
               ||||||||||||||||||||
Sbjct: 1761109 cattgctgccgaaaaggaaa 1761090



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>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete
              sequence
          Length = 146713

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 457    tactattctattttcacgtaaaag 480
              |||||||||||||||| |||||||
Sbjct: 105698 tactattctattttcaagtaaaag 105721



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>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete
             sequence
          Length = 155501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   aattgatttgttagaatcac 314
             ||||||||||||||||||||
Sbjct: 71266 aattgatttgttagaatcac 71247



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>gb|AC161047.2| Mus musculus BAC clone RP24-189I12 from chromosome 12, complete
             sequence
          Length = 153447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ttaccaatgctactgattca 153
             ||||||||||||||||||||
Sbjct: 34056 ttaccaatgctactgattca 34037


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,637,396
Number of Sequences: 3902068
Number of extensions: 5637396
Number of successful extensions: 113922
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113723
Number of HSP's gapped (non-prelim): 189
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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