ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal3m08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E12, full insert sequence Length = 620 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 75 ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 134 |||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 63 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 122 Query: 135 cctccgcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcgg 194 |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 123 cctccgcttcggatgctgcagcatggagttctgcatctgcttgcttctcaccatccttgg 182 Query: 195 ctacatccccggcatcatctacgcggtctacgtgct 230 ||| |||| |||||||||||||| ||||| ||||| Sbjct: 183 ctatgtccctggcatcatctacgcagtctatgtgct 218
>dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypeptide, complete cds Length = 740 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 75 ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 134 |||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 189 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 248 Query: 135 cctccgcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcgg 194 |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 249 cctccgcttcggatgctgcagcatggagttctgcatctgcttgcttctcaccatccttgg 308 Query: 195 ctacatccccggcatcatctacgcggtctacgtgct 230 ||| |||| |||||||||||||| ||||| ||||| Sbjct: 309 ctatgtccctggcatcatctacgcagtctatgtgct 344
>gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence Length = 610 Score = 194 bits (98), Expect = 2e-46 Identities = 176/202 (87%) Strand = Plus / Minus Query: 80 gctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctcc 139 ||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 426 gctgcaccttcctggagatcctcttcgccatcatcctcccgcccctcggcgtcttcctcc 367 Query: 140 gcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctaca 199 | |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||| Sbjct: 366 gattcggctgctgcagaatagagttctgcatctgcctgctgctcacaatccttggctacg 307 Query: 200 tccccggcatcatctacgcggtctacgtgctcgtcgcgctcggctcggaggaccgcgata 259 ||||||| |||||||||||| |||| || || || || |||| ||| || | | ||| | Sbjct: 306 tccccggaatcatctacgcgatctatgtccttgttgctctcgactctgaccagcacgaga 247 Query: 260 gggactacgacacccttgctta 281 |||| ||| ||||||||||||| Sbjct: 246 gggaatactacacccttgctta 225
>gb|AY108684.1| Zea mays PCO116945 mRNA sequence Length = 626 Score = 194 bits (98), Expect = 2e-46 Identities = 176/202 (87%) Strand = Plus / Plus Query: 80 gctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctcc 139 ||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 144 gctgcaccttcctggagatcctcttcgccatcatcctcccgcccctcggcgtcttcctcc 203 Query: 140 gcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctaca 199 | |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||| Sbjct: 204 gattcggctgctgcagaatagagttctgcatctgcctgctgctcacaatccttggctacg 263 Query: 200 tccccggcatcatctacgcggtctacgtgctcgtcgcgctcggctcggaggaccgcgata 259 ||||||| |||||||||||| |||| || || || || |||| ||| || | | ||| | Sbjct: 264 tccccggaatcatctacgcgatctatgtccttgttgctctcgactctgaccagcacgaga 323 Query: 260 gggactacgacacccttgctta 281 |||| ||| ||||||||||||| Sbjct: 324 gggaatactacacccttgctta 345
>gb|AY823550.1| Pennisetum glaucum low temperature and salt responsive protein mRNA, complete cds Length = 520 Score = 178 bits (90), Expect = 1e-41 Identities = 138/154 (89%) Strand = Plus / Plus Query: 88 ttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggc 147 ||||| |||||||| |||||||| |||| ||||||||||||||||||||||| |||||| Sbjct: 72 ttcctggagatcctcctcgccatcgtcctcccgccgctcggcgtcttcctccgattcggc 131 Query: 148 tgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggc 207 ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| || Sbjct: 132 tgctgcagcatggagttctgcatctgcttgctgctcacaatcctcggctatatccctgga 191 Query: 208 atcatctacgcggtctacgtgctcgtcgcgctcg 241 || ||||||||| ||||||| || ||||| |||| Sbjct: 192 atgatctacgcgatctacgtccttgtcgctctcg 225
>gb|AY131234.1| Triticum aestivum putative low temperature and salt responsive protein mRNA, partial cds Length = 207 Score = 131 bits (66), Expect = 2e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 153 |||||||||| ||||||| |||| ||||| |||||||||| ||||||| |||||||||| Sbjct: 13 gagatcctgtgcgccatcctcctcccgcccctcggcgtctgcctccgccacggctgctgc 72 Query: 154 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 213 |||||||||||| ||| || ||||||||||||||||||||||| |||||||| || || Sbjct: 73 tccatggagttctggatcagcgtgctgctcaccatcctcggctacctccccggcgtcctc 132 Query: 214 tacgcggtctacgt 227 ||||| | |||||| Sbjct: 133 tacgccgcctacgt 146
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 75 ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 134 |||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 85816 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 85875 Query: 135 cctccgcttcggctgctgcagc 156 |||||||||||| ||||||||| Sbjct: 85876 cctccgcttcggatgctgcagc 85897 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 |||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||||| Sbjct: 86774 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 86833 Query: 217 gcggtctacgtgct 230 || ||||| ||||| Sbjct: 86834 gcagtctatgtgct 86847
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 75 ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 134 |||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 21880382 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 21880441 Query: 135 cctccgcttcggctgctgcagc 156 |||||||||||| ||||||||| Sbjct: 21880442 cctccgcttcggatgctgcagc 21880463 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 |||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||||| Sbjct: 21881340 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 21881399 Query: 217 gcggtctacgtgct 230 || ||||| ||||| Sbjct: 21881400 gcagtctatgtgct 21881413
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 75 ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 134 |||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 11099 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 11158 Query: 135 cctccgcttcggctgctgcagc 156 |||||||||||| ||||||||| Sbjct: 11159 cctccgcttcggatgctgcagc 11180 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 |||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||||| Sbjct: 12057 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 12116 Query: 217 gcggtctacgtgct 230 || ||||| ||||| Sbjct: 12117 gcagtctatgtgct 12130
>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full insert sequence Length = 577 Score = 115 bits (58), Expect = 1e-22 Identities = 115/134 (85%) Strand = Plus / Plus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 153 |||||||| | ||||||| |||| || ||||||||||||| ||||||| ||||||||| Sbjct: 85 gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 144 Query: 154 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 213 | |||||||||||| || || ||||||||||||||||||| ||| |||||||| || || Sbjct: 145 accatggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctc 204 Query: 214 tacgcggtctacgt 227 ||||| |||||||| Sbjct: 205 tacgccgtctacgt 218
>gb|AY107179.1| Zea mays PCO146860 mRNA sequence Length = 698 Score = 115 bits (58), Expect = 1e-22 Identities = 123/144 (85%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 153 ||||||||| | |||||| | ||||||||| |||||||||||||||||| ||| | | Sbjct: 176 gagatcctgctggccatcctgctgccgccggtcggcgtcttcctccgctacgg---catc 232 Query: 154 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 213 | | |||||||| ||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 233 ggggttgagttctggatctgcctgctgctcaccatcctgggatacatcccgggcatcatc 292 Query: 214 tacgcggtctacgtgctcgtcgcg 237 ||||| |||||||| ||||||||| Sbjct: 293 tacgccgtctacgtcctcgtcgcg 316
>gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic protein (DRR2) mRNA, complete cds Length = 547 Score = 111 bits (56), Expect = 2e-21 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||| ||| | ||||| ||| Sbjct: 155 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 211 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 212 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 266
>gb|AF503583.2| Oryza sativa (indica cultivar-group) early drought induced protein (R1G1B) mRNA, complete cds Length = 649 Score = 111 bits (56), Expect = 2e-21 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||| ||| | ||||| ||| Sbjct: 180 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 236 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 237 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 291
>dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G07, full insert sequence Length = 622 Score = 111 bits (56), Expect = 2e-21 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||| ||| | ||||| ||| Sbjct: 183 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 239 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 240 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 294
>gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temperature-induced low molecular weight integral membrane protein LTI6b mRNA, complete cds Length = 630 Score = 111 bits (56), Expect = 2e-21 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||| ||| | ||||| ||| Sbjct: 162 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 218 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 219 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 273
>ref|XM_479247.1| Oryza sativa (japonica cultivar-group), mRNA Length = 171 Score = 107 bits (54), Expect = 3e-20 Identities = 104/120 (86%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 |||||||||||||||||||||||||||||||| || ||||||||| | | | |||| Sbjct: 38 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 94 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| |||| Sbjct: 95 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 154
>gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic protein (DRR1) mRNA, complete cds Length = 571 Score = 107 bits (54), Expect = 3e-20 Identities = 104/120 (86%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 |||||||||||||||||||||||||||||||| || ||||||||| | | | |||| Sbjct: 140 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 196 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| |||| Sbjct: 197 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 256
>gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, partial sequence Length = 2248 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1172 gagttctggatctgcctgctgctcaccatcctgggatacatcccgggcatcatctacgcc 1231 Query: 220 gtctacgtgctcgtcgcg 237 |||||||| ||||||||| Sbjct: 1232 gtctacgtcctcgtcgcg 1249 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccg 140 ||||||||| | |||||| | ||||||||| |||||||||||||||| Sbjct: 1109 gagatcctgctggccatcctgctgccgccggtcggcgtcttcctccg 1155
>dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065L15, full insert sequence Length = 636 Score = 107 bits (54), Expect = 3e-20 Identities = 104/120 (86%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 |||||||||||||||||||||||||||||||| || ||||||||| | | | |||| Sbjct: 165 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 221 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| |||| Sbjct: 222 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 281
>gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temperature-induced low molecular weight integral membrane protein LTI6a mRNA, complete cds Length = 616 Score = 107 bits (54), Expect = 3e-20 Identities = 104/120 (86%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 |||||||||||||||||||||||||||||||| || ||||||||| | | | |||| Sbjct: 150 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 206 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| |||| Sbjct: 207 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 266
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 95.6 bits (48), Expect = 1e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 151 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 210 ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 29098 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 29040 Query: 211 atctacgc 218 |||||||| Sbjct: 29039 atctacgc 29032 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| ||||| ||||||||||||||| Sbjct: 29259 tcgccatcatcctcccgcccctcggcgtcttcctc 29225
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 1e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 151 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 210 ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 2159869 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 2159811 Query: 211 atctacgc 218 |||||||| Sbjct: 2159810 atctacgc 2159803 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 ||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||| Sbjct: 1186322 atggagttctggatcgccctgctgctcaccatcctgggatacttacccggcatcatctac 1186263 Query: 217 gc 218 || Sbjct: 1186262 gc 1186261 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggc 147 |||||| | |||||||||||||||||||||||||||| |||| Sbjct: 1186442 gccatcctgctgccgccgctcggcgtcttcctccgctacggc 1186401 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| ||||| ||||||||||||||| Sbjct: 2160030 tcgccatcatcctcccgcccctcggcgtcttcctc 2159996
>dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057O07, full insert sequence Length = 1507 Score = 95.6 bits (48), Expect = 1e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 151 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 210 ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 350 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 408 Query: 211 atctacgc 218 |||||||| Sbjct: 409 atctacgc 416 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| ||||| ||||||||||||||| Sbjct: 189 tcgccatcatcctcccgcccctcggcgtcttcctc 223
>ref|XM_475521.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 165 Score = 93.7 bits (47), Expect = 5e-16 Identities = 97/113 (85%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagttc 165 |||||| | |||||||||||||||||||||||||||| |||| | ||| |||||||| Sbjct: 34 gccatcctgctgccgccgctcggcgtcttcctccgctacggcatcggca---tggagttc 90 Query: 166 tgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 || ||| |||||||||||||||||| || ||| | ||||||||||||||||| Sbjct: 91 tggatcgccctgctgctcaccatcctgggatacttacccggcatcatctacgc 143
>dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membrane protein 3, complete cds Length = 579 Score = 87.7 bits (44), Expect = 3e-14 Identities = 99/115 (86%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||| Sbjct: 110 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggctgcgg--gcatg-agt 166 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| |||||||| |||||||| ||||||| |||||||| || ||||||||||| Sbjct: 167 tctggatctgcctcttgctcaccttcctcgggtacatcccgggtatcatctacgc 221
>dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G21, full insert sequence Length = 1039 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 151 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 210 ||||||||| ||||||| |||||| || |||||||| ||||||||||||||||||||||| Sbjct: 353 tgcagcatg-agttctggatctgcttgttgctcaccttcctcggctacatccccggcatc 411 Query: 211 atctacgc 218 |||||||| Sbjct: 412 atctacgc 419 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| ||||| ||||||||||||||| Sbjct: 192 tcgccatcatcctcccgcccctcggcgtcttcctc 226
>gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA Length = 220 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 15 gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatctacgc 73
>gb|AY111401.1| Zea mays CL37957_1 mRNA sequence Length = 478 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 311 gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatctacgc 253 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 atcctgttcgccatcatcctgccgccgct 125 |||||| |||||||||||||||| ||||| Sbjct: 371 atcctgatcgccatcatcctgcctccgct 343
>gb|AY103848.1| Zea mays PCO061754 mRNA sequence Length = 846 Score = 83.8 bits (42), Expect = 5e-13 Identities = 101/120 (84%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||||||||||||||| |||||| || ||||||||| | | |||| Sbjct: 176 tcgccatcatcctgccgccgctcggggtcttcttcaagttcggctgcgggg---ttgagt 232 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||||| | |||||| ||||||||||| ||||||||||||||||||| |||| Sbjct: 233 tctggatctgccttatcctcaccttcctcggctacctccccggcatcatctacgccgtct 292
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 26350425 gagttctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgct 26350484 Query: 220 gtct 223 |||| Sbjct: 26350485 gtct 26350488 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttc 135 |||||||||||||||||||||||||||||||| Sbjct: 26350257 tcgccatcatcctgccgccgctcggcgtcttc 26350288
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 4665 gagttctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgct 4724 Query: 220 gtct 223 |||| Sbjct: 4725 gtct 4728 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttc 135 |||||||||||||||||||||||||||||||| Sbjct: 4497 tcgccatcatcctgccgccgctcggcgtcttc 4528
>gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence Length = 472 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||||||| |||||||| || |||||| ||||||||||||||||||||||||| ||||| Sbjct: 174 gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatttacgc 232
>gb|AY823549.1| Pennisetum glaucum low temperature and salt responsive protein mRNA, complete cds Length = 565 Score = 75.8 bits (38), Expect = 1e-10 Identities = 100/120 (83%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||||||||||||||| |||||| || ||||||||| | | |||| Sbjct: 175 tcgccatcatcctgccgccgctcggggtcttcttcaagttcggctgcgggg---ttgagt 231 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||||||| | |||||| || |||||||| ||||||||||||||||||| |||| Sbjct: 232 tctggatctgcctcgtcctcaccttcttcggctacctccccggcatcatctacgccgtct 291
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 ||||||||||| || || ||||||||||||||||||| ||| |||||||| || ||||| Sbjct: 4275670 atggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctctac 4275611 Query: 217 gcggtctacgt 227 || |||||||| Sbjct: 4275610 gccgtctacgt 4275600 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 118 ccgccgctcggcgtcttcctccgcttcggctgctgcagc 156 |||||||||||||||||| |||||| ||||| ||||||| Sbjct: 26293258 ccgccgctcggcgtcttcttccgctacggcttctgcagc 26293296 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 153 |||||||| | ||||||| |||| || ||||||||||||| ||||||| ||||||||| Sbjct: 4275848 gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 4275789 Query: 154 a 154 | Sbjct: 4275788 a 4275788
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 ||||||||||| || || ||||||||||||||||||| ||| |||||||| || ||||| Sbjct: 120891 atggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctctac 120832 Query: 217 gcggtctacgt 227 || |||||||| Sbjct: 120831 gccgtctacgt 120821 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 94 gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 153 |||||||| | ||||||| |||| || ||||||||||||| ||||||| ||||||||| Sbjct: 121069 gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 121010 Query: 154 a 154 | Sbjct: 121009 a 121009
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 157 atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 216 ||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||| Sbjct: 36608 atggagttctggatcgccctgctgctcaccatcctgggatacttacccggcatcatctac 36549 Query: 217 gc 218 || Sbjct: 36548 gc 36547 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggc 147 |||||| | |||||||||||||||||||||||||||| |||| Sbjct: 36728 gccatcctgctgccgccgctcggcgtcttcctccgctacggc 36687
>gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydrophobic peptide (ESI3) gene, complete cds Length = 652 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||||| ||||||||||| || || |||||||||| Sbjct: 283 tggagttctggatctgtctcttgctgaccatactcggctacataccggggatcatctacg 342 Query: 218 cggtctacgtgct 230 |||| |||||||| Sbjct: 343 cggtgtacgtgct 355
>dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membrane protein 3, complete cds Length = 513 Score = 63.9 bits (32), Expect = 5e-07 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| ||||| ||| | |||| |||| Sbjct: 113 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcat-gagt 169 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 |||| |||||||| |||||||| ||||||| | |||||| || || |||||||| Sbjct: 170 tctggatctgcctcttgctcaccttcctcgggttcatcccgggtattatctacgc 224
>gb|AY105302.1| Zea mays PCO074610 mRNA sequence Length = 553 Score = 60.0 bits (30), Expect = 7e-06 Identities = 95/116 (81%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| ||||| ||||||||||||||| |||| |||||| | || | Sbjct: 103 tcgccatcatcctcccgcctctcggcgtcttcctcaagttcg---gctgcaaggtcgaat 159 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||| ||||||| ||||||||| |||||| ||| ||||||| |||||||||||| Sbjct: 160 tctggctctgcctcctgctcaccttcctcgcctatctccccgggatcatctacgcg 215
>dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C08, full insert sequence Length = 850 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 118 ccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagttc 165 |||||||||||||||||| |||||| ||||| ||||||| ||||||| Sbjct: 215 ccgccgctcggcgtcttcttccgctacggcttctgcagctcggagttc 262
>ref|NM_183567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 54.0 bits (27), Expect = 4e-04 Identities = 98/121 (80%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 163 ||||||||||||| || || ||||||||||||||| |||| | |||| |||||| Sbjct: 38 tcgccatcatcctccctcctctcggcgtcttcctcaagttcg---gatgcaaggtggagt 94 Query: 164 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 223 |||| |||| || ||||||||| || ||||||| |||| || |||||||||||||||| Sbjct: 95 tctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacgcggtct 154 Query: 224 a 224 | Sbjct: 155 a 155
>ref|XM_470667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 165 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 34 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 76
>ref|NM_184595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 195 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 |||||||||||||||| || ||||||||||||||| Sbjct: 59 tcgccatcatcctgcctcccctcggcgtcttcctc 93
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 |||||||||||||||| || ||||||||||||||| Sbjct: 14387650 tcgccatcatcctgcctcccctcggcgtcttcctc 14387616 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 9872244 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 9872202 Score = 40.1 bits (20), Expect = 6.6 Identities = 53/64 (82%) Strand = Plus / Minus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| |||||||| ||||||| || | |||||| |||| || ||||||||||| Sbjct: 14387466 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 14387407 Query: 220 gtct 223 |||| Sbjct: 14387406 gtct 14387403 Score = 40.1 bits (20), Expect = 6.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 179 tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 230 |||| ||||| || || |||||||| || |||||||||||||| || ||||| Sbjct: 9872050 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 9871999
>gb|U39649.1| Caenorhabditis elegans cosmid T23F2, complete sequence Length = 26527 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 168 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||| | |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 22624 catctgcattctgctcacaattctcggctacattcccggaatcatctacgc 22574 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 168 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||| | |||||||||||||| || ||||| || |||||||||||||| Sbjct: 19889 catctgcattctgctcaccatcctgggatacattccaggcatcatctacgc 19839
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 |||||||||||||||| || ||||||||||||||| Sbjct: 136879 tcgccatcatcctgcctcccctcggcgtcttcctc 136845 Score = 40.1 bits (20), Expect = 6.6 Identities = 53/64 (82%) Strand = Plus / Minus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| |||||||| ||||||| || | |||||| |||| || ||||||||||| Sbjct: 136695 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 136636 Query: 220 gtct 223 |||| Sbjct: 136635 gtct 136632
>ref|NM_076534.1| Caenorhabditis elegans T23F2.4 (T23F2.4) mRNA, complete cds Length = 234 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 168 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||| | |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 159 catctgcattctgctcacaattctcggctacattcccggaatcatctacgc 209
>ref|NM_076533.3| Caenorhabditis elegans T23F2.3 (T23F2.3) mRNA, complete cds Length = 295 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 168 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||| | |||||||||||||| || ||||| || |||||||||||||| Sbjct: 122 catctgcattctgctcaccatcctgggatacattccaggcatcatctacgc 172
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 |||||||||||||||| || ||||||||||||||| Sbjct: 14382625 tcgccatcatcctgcctcccctcggcgtcttcctc 14382591 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 9870365 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 9870323 Score = 40.1 bits (20), Expect = 6.6 Identities = 53/64 (82%) Strand = Plus / Minus Query: 160 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 219 |||||||| |||||||| ||||||| || | |||||| |||| || ||||||||||| Sbjct: 14382441 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 14382382 Query: 220 gtct 223 |||| Sbjct: 14382381 gtct 14382378 Score = 40.1 bits (20), Expect = 6.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 179 tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 230 |||| ||||| || || |||||||| || |||||||||||||| || ||||| Sbjct: 9870171 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 9870120
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| |||| || ||||||||| || ||||||| |||| || |||||||||| Sbjct: 10331873 tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 10331932 Query: 218 cggtcta 224 ||||||| Sbjct: 10331933 cggtcta 10331939 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 159 ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||||| |||||||| || |||||| ||||||||| | || |||||||||||||| Sbjct: 10317866 ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 10317925 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| || || ||||||||||||||| Sbjct: 10331669 tcgccatcatcctccctcctctcggcgtcttcctc 10331703
>gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, partial sequence Length = 3374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgc 150 |||||||| |||| |||||| ||||||||||||| |||| ||||||| Sbjct: 2024 tcgccatcttcctcccgccggtcggcgtcttcctgcgctacggctgc 2070
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 34633 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 34591 Score = 40.1 bits (20), Expect = 6.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 179 tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 230 |||| ||||| || || |||||||| || |||||||||||||| || ||||| Sbjct: 34439 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 34388
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 2253 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 2295 Score = 40.1 bits (20), Expect = 6.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 179 tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 230 |||| ||||| || || |||||||| || |||||||||||||| || ||||| Sbjct: 2447 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 2498
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| |||| || ||||||||| || ||||||| |||| || |||||||||| Sbjct: 38593 tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 38652 Query: 218 cggtcta 224 ||||||| Sbjct: 38653 cggtcta 38659 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 159 ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||||| |||||||| || |||||| ||||||||| | || |||||||||||||| Sbjct: 24586 ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 24645 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctc 138 ||||||||||||| || || ||||||||||||||| Sbjct: 38389 tcgccatcatcctccctcctctcggcgtcttcctc 38423
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 118 ccgccgctcggcgtcttcctccgcttcggctgctgcagc 156 |||||||||||||||||| |||||| ||||| ||||||| Sbjct: 157798 ccgccgctcggcgtcttcttccgctacggcttctgcagc 157836
>dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K01, full insert sequence Length = 488 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 106 gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 148 |||||| ||||||||||| ||||||||||||| |||| ||||| Sbjct: 129 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 171
>dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D10, full insert sequence Length = 590 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| |||| || ||||||||| || ||||||| |||| || |||||||||| Sbjct: 12 tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 71 Query: 218 cggtcta 224 ||||||| Sbjct: 72 cggtcta 78
>dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane protein, complete cds Length = 596 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||||| || || ||||| || || |||||||||| Sbjct: 252 tggagttctggatctgtctcttgctgaccatactggggtacataccggggatcatctacg 311 Query: 218 cggtctacgtgct 230 |||| |||||||| Sbjct: 312 cggtgtacgtgct 324 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgct 142 |||||||||||||||| || ||||||||||||| |||| Sbjct: 103 tcgccatcatcctgcctcccgtcggcgtcttcctgcgct 141
>dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic polypeptide, complete cds Length = 507 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||||| || || ||||| || || |||||||||| Sbjct: 132 tggagttctggatctgtctcttgctgaccatactggggtacataccggggatcatctacg 191 Query: 218 cggtctacgtgct 230 |||| |||||||| Sbjct: 192 cggtgtacgtgct 204 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgct 142 |||||||||||||||| || ||||||||||||| |||| Sbjct: 81 tcgccatcatcctgcctcccgtcggcgtcttcctgcgct 119
>ref|NM_183563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 159 ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||||| |||||||| || |||||| ||||||||| | || |||||||||||||| Sbjct: 85 ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 26
>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete genome Length = 11746 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 178 ctgctcaccatcctcggctacatccccggcatcatctacgcggt 221 ||||||||| | |||||||||||||| |||||| || ||||||| Sbjct: 218 ctgctcaccctgctcggctacatcccgggcatcgtccacgcggt 261 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcct 137 |||||||| ||||||||||||| ||||| ||||| Sbjct: 147 tcgccatcctcctgccgccgctgggcgtgttcct 180
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctcc 139 |||||||||||||||||||||| || || ||||||| Sbjct: 5424435 tcgccatcatcctgccgccgctgggggtgttcctcc 5424400
>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence Length = 211305 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 ccttctttctgtgagtctgtaaa 400 ||||||||||||||||||||||| Sbjct: 140202 ccttctttctgtgagtctgtaaa 140224
>emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putative membrane protein Length = 2288 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgct 142 |||||||||| ||||| ||| ||||||||||||| |||| Sbjct: 1443 tcgccatcattctgccaccggtcggcgtcttcctgcgct 1481 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||||| || || ||||| || || |||||||||| Sbjct: 1611 tggagttctggatctgtctcttgctgaccattctggggtacataccggggatcatctacg 1670 Query: 218 cggtctacgtgct 230 |||| || ||||| Sbjct: 1671 cggtgtatgtgct 1683
>emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA Length = 521 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgct 142 |||||||||| ||||| ||| ||||||||||||| |||| Sbjct: 78 tcgccatcattctgccaccggtcggcgtcttcctgcgct 116 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||||| || || ||||| || || |||||||||| Sbjct: 129 tggagttctggatctgtctcttgctgaccattctggggtacataccggggatcatctacg 188 Query: 218 cggtctacgtgct 230 |||| || ||||| Sbjct: 189 cggtgtatgtgct 201
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 196 tacatccccggcatcatctacgcggtctac 225 |||||||||||||||||| ||||| ||||| Sbjct: 5542430 tacatccccggcatcatccacgcgatctac 5542401
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cagagcaagggagagatctccc 43 |||||||||||||||||||||| Sbjct: 115681 cagagcaagggagagatctccc 115660
>emb|CR753900.9| Zebrafish DNA sequence from clone CH211-167B13 in linkage group 10, complete sequence Length = 113731 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cagagcaagggagagatctccc 43 |||||||||||||||||||||| Sbjct: 9872 cagagcaagggagagatctccc 9893
>emb|AL929494.8| Zebrafish DNA sequence from clone CH211-127N19 in linkage group 20, complete sequence Length = 98841 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cagagcaagggagagatctccc 43 |||||||||||||||||||||| Sbjct: 51579 cagagcaagggagagatctccc 51600
>ref|XM_420246.1| PREDICTED: Gallus gallus similar to sushi-repeat protein (LOC422261), mRNA Length = 2261 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 tgctgcagcatggagttctgcatct 172 ||||||||||||||| ||||||||| Sbjct: 1442 tgctgcagcatggagatctgcatct 1418
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 3075674 ccatcattctgccgccgctcggcgt 3075650
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 2951862 ccatcattctgccgccgctcggcgt 2951838
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 2795025 ccatcattctgccgccgctcggcgt 2795001
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 2795659 ccatcattctgccgccgctcggcgt 2795635
>gb|AC093600.3| Homo sapiens BAC clone RP11-333E5 from 4, complete sequence Length = 165536 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 atttcagctctgaagatttat 472 ||||||||||||||||||||| Sbjct: 144990 atttcagctctgaagatttat 144970
>gb|AC084641.1|CBRG45J09 Caenorhabditis briggsae cosmid G45J09, complete sequence Length = 46744 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 178 ctgctcaccatcctcggctacatccccggcatcatctacgc 218 ||||||||||| ||||| |||||||| || |||||| |||| Sbjct: 14952 ctgctcaccattctcggatacatcccaggaatcatccacgc 14992
>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence Length = 184036 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 tgctcaccatcctcggctaca 199 ||||||||||||||||||||| Sbjct: 90056 tgctcaccatcctcggctaca 90076
>ref|XM_552688.1| Anopheles gambiae str. PEST ENSANGP00000028886 (ENSANGG00000024588), partial mRNA Length = 3639 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gctcggctcggaggaccgcga 257 ||||||||||||||||||||| Sbjct: 1767 gctcggctcggaggaccgcga 1787
>emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putative membrane protein Length = 3081 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 158 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 217 |||||||||| ||||| || |||| ||| | || || ||||| || || |||||||||| Sbjct: 634 tggagttctggatctgtctcttgctgaccctactggggtacataccggggatcatctacg 693 Query: 218 cggtctacgtgct 230 |||| |||||||| Sbjct: 694 cggtgtacgtgct 706 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 104 tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggc 147 |||||||||||||||| || | ||||||||||| |||| |||| Sbjct: 502 tcgccatcatcctgcctccagtaggcgtcttcctgcgctacggc 545
>gb|AY105490.1| Zea mays PCO147287 mRNA sequence Length = 727 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 gccgctcggcgtcttcctccgcttc 144 ||||||||||||||||||| ||||| Sbjct: 364 gccgctcggcgtcttcctcggcttc 388
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcctgctgctcaccatcctcg 193 ||||||||||||||||||||| Sbjct: 2274819 gcctgctgctcaccatcctcg 2274839
>dbj|AB053170.3| Homo sapiens genomic DNA, chromosome 4p15.3, BAC clone:395N09, containing QDPR gene for dihydropteridine reductase, complete cds Length = 128800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 atttcagctctgaagatttat 472 ||||||||||||||||||||| Sbjct: 35077 atttcagctctgaagatttat 35097
>gb|AC154269.1| Mus musculus BAC clone RP24-259B17 from 13, complete sequence Length = 170931 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcttcggctgctgcagcatgg 160 ||||||||||||||||||||| Sbjct: 46886 gcttcggctgctgcagcatgg 46866
>gb|AC173209.3| Mus musculus BAC clone RP24-316K19 from chromosome 13, complete sequence Length = 179701 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcttcggctgctgcagcatgg 160 ||||||||||||||||||||| Sbjct: 31649 gcttcggctgctgcagcatgg 31669
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 3586480 ccatcattctgccgccgctcggcgt 3586456
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 3519190 ccatcattctgccgccgctcggcgt 3519166
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 2645127 ccatcattctgccgccgctcggcgt 2645103
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ccatcatcctgccgccgctcggcgt 131 ||||||| ||||||||||||||||| Sbjct: 2857303 ccatcattctgccgccgctcggcgt 2857327
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 ctgctcaccatcctcggctacatccccggcat 209 ||||| ||||||||||| ||||| |||||||| Sbjct: 1811017 ctgctgaccatcctcggttacattcccggcat 1810986
>gb|AC024805.1| Caenorhabditis elegans cosmid Y51H7C, complete sequence Length = 68661 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaataaatttcagctctgaa 465 |||||||||||||||||||| Sbjct: 25004 gaataaatttcagctctgaa 24985
>ref|XM_754159.1| Ustilago maydis 521 hypothetical protein (UM03105.1) partial mRNA Length = 1884 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cctccgcttcggctgctgca 154 |||||||||||||||||||| Sbjct: 47 cctccgcttcggctgctgca 66
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tcatcctgccgccgctcggc 129 |||||||||||||||||||| Sbjct: 149039 tcatcctgccgccgctcggc 149058
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 acgtgctcgtcgcgctcggc 243 |||||||||||||||||||| Sbjct: 35205 acgtgctcgtcgcgctcggc 35224
>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence Length = 160573 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 tgcagcatggagttctgcatctgc 174 ||||| |||||||||||||||||| Sbjct: 146284 tgcaggatggagttctgcatctgc 146261
>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence Length = 161443 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 catctgcctgctgctcacca 187 |||||||||||||||||||| Sbjct: 144695 catctgcctgctgctcacca 144714
>gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, complete sequence Length = 161925 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 catctgcctgctgctcacca 187 |||||||||||||||||||| Sbjct: 66398 catctgcctgctgctcacca 66417
>emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chromosome 14, complete sequence Length = 78271 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 atggagttctgcatctgcct 176 |||||||||||||||||||| Sbjct: 4499 atggagttctgcatctgcct 4480
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cccccgatccgatccgagat 60 |||||||||||||||||||| Sbjct: 663718 cccccgatccgatccgagat 663699
>dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-143J12, complete sequence Length = 155671 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gcgtcccggagctgcacctt 89 |||||||||||||||||||| Sbjct: 136591 gcgtcccggagctgcacctt 136572
>gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complete sequence Length = 206436 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gcatctgcctgctgctcacc 186 |||||||||||||||||||| Sbjct: 45879 gcatctgcctgctgctcacc 45860
>gb|AC134457.4| Mus musculus BAC clone RP23-340O18 from 10, complete sequence Length = 186273 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaataaatttcagctctgaa 465 |||||||||||||||||||| Sbjct: 71000 gaataaatttcagctctgaa 70981
>dbj|AP005263.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-21J18, complete sequence Length = 154926 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gcgtcccggagctgcacctt 89 |||||||||||||||||||| Sbjct: 49486 gcgtcccggagctgcacctt 49467
>emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chromosome 2, complete sequence Length = 46845 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gacgctgtgtgtttccatat 362 |||||||||||||||||||| Sbjct: 24168 gacgctgtgtgtttccatat 24187
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttctttctgtgagtctgtaa 399 |||||||||||||||||||| Sbjct: 124567 ttctttctgtgagtctgtaa 124548
>dbj|D64176.1|HUMNDUFV2 Human NDUFV2 gene for 24-kDa subunit of complex I, exon 1 Length = 780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gcgtcccggagctgcacctt 89 |||||||||||||||||||| Sbjct: 179 gcgtcccggagctgcacctt 160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,383,356 Number of Sequences: 3902068 Number of extensions: 3383356 Number of successful extensions: 72859 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72061 Number of HSP's gapped (non-prelim): 795 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
