ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467162.1| Oryza sativa (japonica cultivar-group), mRNA 133 5e-28
2dbj|AB120515.1| Oryza sativa (japonica cultivar-group) OsTPP1 mR... 133 5e-28
3dbj|AK103391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
5dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
6dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
7gb|AY109748.1| Zea mays CL426_1 mRNA sequence 98 3e-17
8emb|Z73259.1|SCYLR087C S.cerevisiae chromosome XII reading frame... 44 0.35
9emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4,... 44 0.35
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
11gb|U53880.1|YSCL9449 Saccharomyces cerevisiae chromosome XII cos... 44 0.35
12emb|AL356774.13| Human DNA sequence from clone RP11-203B4 on chr... 42 1.4
13gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 1.4
14ref|XM_958653.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
15ref|XM_332066.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
16gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, comp... 40 5.5
17emb|AL513189.13| Human DNA sequence from clone RP11-339I11 on ch... 40 5.5
18emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on ch... 40 5.5
19emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11... 40 5.5
20gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence 40 5.5
21dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 5.5
22emb|BX247879.5| Zebrafish DNA sequence from clone CH211-195N15, ... 40 5.5
23gb|AF086789.1|AF086789 Homo sapiens mitochondrial aconitase (ACO... 40 5.5
24emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chro... 40 5.5 
>ref|XM_467162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1769

 Score =  133 bits (67), Expect = 5e-28
 Identities = 151/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 97  aacggagctggctttgtatggcttttcatatgcaagaatccagtcttgtgatatagatgt 156
           |||||||||||| || ||||||||||| |||| |  ||||||    | ||||||||||||
Sbjct: 102 aacggagctggcgttttatggcttttcctatgaagcaatccacatctctgatatagatgt 161

                                                                       
Query: 157 gtcatctctctcagcatgacaagttcttaggtattctgctgttgatgaacttccaccaca 216
           ||  ||  ||| | ||||||||||||| |||||||   ||||||||||||| || |||||
Sbjct: 162 gtactcgttctgaacatgacaagttctcaggtatttctctgttgatgaactgcctccaca 221

                                                                      
Query: 217 cctgcagcgacaagaaaacgctgaagaagtggttcttcatcgacaagacagtgggctaa 275
           ||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 222 cctgcagtgacaagaagacactgaagaagtggtttttcatcgacaagacagttggctaa 280



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 338 atggatttgagcaacagctcaccggtcatcaccga 372
           |||||||||||||| |||||||| |||||||||||
Sbjct: 355 atggatttgagcaatagctcacctgtcatcaccga 389
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>dbj|AB120515.1| Oryza sativa (japonica cultivar-group) OsTPP1 mRNA for
           trehalose-6-phosphate phosphatase, complete cds
          Length = 1770

 Score =  133 bits (67), Expect = 5e-28
 Identities = 151/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 97  aacggagctggctttgtatggcttttcatatgcaagaatccagtcttgtgatatagatgt 156
           |||||||||||| || ||||||||||| |||| |  ||||||    | ||||||||||||
Sbjct: 92  aacggagctggcgttttatggcttttcctatgaagcaatccacatctctgatatagatgt 151

                                                                       
Query: 157 gtcatctctctcagcatgacaagttcttaggtattctgctgttgatgaacttccaccaca 216
           ||  ||  ||| | ||||||||||||| |||||||   ||||||||||||| || |||||
Sbjct: 152 gtactcgttctgaacatgacaagttctcaggtatttctctgttgatgaactgcctccaca 211

                                                                      
Query: 217 cctgcagcgacaagaaaacgctgaagaagtggttcttcatcgacaagacagtgggctaa 275
           ||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 212 cctgcagtgacaagaagacactgaagaagtggtttttcatcgacaagacagttggctaa 270



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 338 atggatttgagcaacagctcaccggtcatcaccga 372
           |||||||||||||| |||||||| |||||||||||
Sbjct: 345 atggatttgagcaatagctcacctgtcatcaccga 379
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>dbj|AK103391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127L03, full
           insert sequence
          Length = 1769

 Score =  125 bits (63), Expect = 1e-25
 Identities = 150/179 (83%)
 Strand = Plus / Plus

                                                                       
Query: 97  aacggagctggctttgtatggcttttcatatgcaagaatccagtcttgtgatatagatgt 156
           |||||||||||| || ||||||||||| ||||    ||||||    | ||||||||||||
Sbjct: 102 aacggagctggcgttttatggcttttcctatgaggcaatccacatctctgatatagatgt 161

                                                                       
Query: 157 gtcatctctctcagcatgacaagttcttaggtattctgctgttgatgaacttccaccaca 216
           ||  ||  ||| | ||||||||||||| |||||||   ||||||||||||| || |||||
Sbjct: 162 gtactcgttctgaacatgacaagttctcaggtatttctctgttgatgaactgcctccaca 221

                                                                      
Query: 217 cctgcagcgacaagaaaacgctgaagaagtggttcttcatcgacaagacagtgggctaa 275
           ||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 222 cctgcagtgacaagaagacactgaagaagtggtttttcatcgacaagacagttggctaa 280



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 338 atggatttgagcaacagctcaccggtcatcaccga 372
           |||||||||||||| |||||||| |||||||||||
Sbjct: 355 atggatttgagcaatagctcacctgtcatcaccga 389
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                            
Query: 178      agttcttaggtattctgctgttgatgaacttccaccacacctgcagcgacaagaaaacgc 237
                |||||| |||||||   ||||||||||||| || |||||||||||| |||||||| || |
Sbjct: 26788675 agttctcaggtatttctctgttgatgaactgcctccacacctgcagtgacaagaagacac 26788616

                                                      
Query: 238      tgaagaagtggttcttcatcgacaagacagtgggctaa 275
                ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 26788615 tgaagaagtggtttttcatcgacaagacagttggctaa 26788578



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 338      atggatttgagcaacagctcaccggtcatcaccga 372
                |||||||||||||| |||||||| |||||||||||
Sbjct: 26788503 atggatttgagcaatagctcacctgtcatcaccga 26788469



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 97       aacggagctggctttgtatggcttttcatatg 128
                |||||||||||| || ||||||||||| ||||
Sbjct: 26788848 aacggagctggcgttttatggcttttcctatg 26788817
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>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0708H12
          Length = 162381

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                          
Query: 178    agttcttaggtattctgctgttgatgaacttccaccacacctgcagcgacaagaaaacgc 237
              |||||| |||||||   ||||||||||||| || |||||||||||| |||||||| || |
Sbjct: 150705 agttctcaggtatttctctgttgatgaactgcctccacacctgcagtgacaagaagacac 150646

                                                    
Query: 238    tgaagaagtggttcttcatcgacaagacagtgggctaa 275
              ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 150645 tgaagaagtggtttttcatcgacaagacagttggctaa 150608



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 338    atggatttgagcaacagctcaccggtcatcaccga 372
              |||||||||||||| |||||||| |||||||||||
Sbjct: 150533 atggatttgagcaatagctcacctgtcatcaccga 150499



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 97     aacggagctggctttgtatggcttttcatatg 128
              |||||||||||| || ||||||||||| ||||
Sbjct: 150878 aacggagctggcgttttatggcttttcctatg 150847
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>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516F12
          Length = 146364

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                         
Query: 178   agttcttaggtattctgctgttgatgaacttccaccacacctgcagcgacaagaaaacgc 237
             |||||| |||||||   ||||||||||||| || |||||||||||| |||||||| || |
Sbjct: 54728 agttctcaggtatttctctgttgatgaactgcctccacacctgcagtgacaagaagacac 54669

                                                   
Query: 238   tgaagaagtggttcttcatcgacaagacagtgggctaa 275
             ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 54668 tgaagaagtggtttttcatcgacaagacagttggctaa 54631



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 338   atggatttgagcaacagctcaccggtcatcaccga 372
             |||||||||||||| |||||||| |||||||||||
Sbjct: 54556 atggatttgagcaatagctcacctgtcatcaccga 54522



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 97    aacggagctggctttgtatggcttttcatatg 128
             |||||||||||| || ||||||||||| ||||
Sbjct: 54901 aacggagctggcgttttatggcttttcctatg 54870
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>gb|AY109748.1| Zea mays CL426_1 mRNA sequence
          Length = 1620

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 caagttcttaggtattctgctgttgatgaacttccaccacacctgcagcgacaagaaaac 235
           |||||||| ||||| || || ||||||||||| || |||||||||| |||||||||| ||
Sbjct: 65  caagttctcaggtactccgccgttgatgaactgcctccacacctgcggcgacaagaagac 124

                                                   
Query: 236 gctgaagaagtggttcttcatcgacaagacagtgggctaa 275
           |||||||||||||     ||||||||||||||| ||||||
Sbjct: 125 gctgaagaagtggnnnnncatcgacaagacagtaggctaa 164
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>emb|Z73259.1|SCYLR087C S.cerevisiae chromosome XII reading frame ORF YLR087c
          Length = 13097

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    catcattctgaacattggagtt 96
             ||||||||||||||||||||||
Sbjct: 10623 catcattctgaacattggagtt 10644
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>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 228    aagaaaacgctgaagaagtggttcttcatcgacaagac 265
              |||||||| || ||||||||||| ||||| ||||||||
Sbjct: 132268 aagaaaacactcaagaagtggtttttcattgacaagac 132231
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 228      aagaaaacgctgaagaagtggttcttcatcgacaagac 265
                |||||||| || ||||||||||| ||||| ||||||||
Sbjct: 27701642 aagaaaacactcaagaagtggtttttcattgacaagac 27701605
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>gb|U53880.1|YSCL9449 Saccharomyces cerevisiae chromosome XII cosmid 9449
          Length = 42022

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    catcattctgaacattggagtt 96
             ||||||||||||||||||||||
Sbjct: 29357 catcattctgaacattggagtt 29378
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>emb|AL356774.13| Human DNA sequence from clone RP11-203B4 on chromosome 6 Contains a
             cytochrome b (MTCYB) pseudogene, complete sequence
          Length = 36332

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   tgtgatatagatgtgtcatct 163
             |||||||||||||||||||||
Sbjct: 26480 tgtgatatagatgtgtcatct 26500
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 53      gaggttgaaacccgggcctttgcat 77
               |||| ||||||||||||||||||||
Sbjct: 1985133 gaggctgaaacccgggcctttgcat 1985109
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>ref|XM_958653.1| Neurospora crassa OR74A hypothetical protein (NCU09375.1) partial
           mRNA
          Length = 645

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 209 ccaccacacctgcagcgacaagaa 232
           |||||||||| |||||||||||||
Sbjct: 622 ccaccacaccagcagcgacaagaa 599
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>ref|XM_332066.1| Neurospora crassa OR74A hypothetical protein (NCU09375.1) partial
           mRNA
          Length = 645

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 209 ccaccacacctgcagcgacaagaa 232
           |||||||||| |||||||||||||
Sbjct: 622 ccaccacaccagcagcgacaagaa 599
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>gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, complete sequence
          Length = 134825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   atagatgtgtcatctctctc 168
             ||||||||||||||||||||
Sbjct: 44573 atagatgtgtcatctctctc 44592
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>emb|AL513189.13| Human DNA sequence from clone RP11-339I11 on chromosome 1 Contains part
             of a novel gene, complete sequence
          Length = 59522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   atgtgtcatctctctcagca 172
             ||||||||||||||||||||
Sbjct: 23345 atgtgtcatctctctcagca 23326
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>emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on chromosome 13 Contains a
            CpG island, complete sequence
          Length = 157379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   tttgcatcattctgaacatt 90
            ||||||||||||||||||||
Sbjct: 6021 tttgcatcattctgaacatt 6002
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>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete
             sequence
          Length = 150236

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   agcaaatccagctgaaagag 294
             ||||||||||||||||||||
Sbjct: 74197 agcaaatccagctgaaagag 74178
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>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence
          Length = 157530

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   agcaaatccagctgaaagag 294
             ||||||||||||||||||||
Sbjct: 47288 agcaaatccagctgaaagag 47269
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    caagacagtgggctaagcaa 279
              ||||||||||||||||||||
Sbjct: 671060 caagacagtgggctaagcaa 671079
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>emb|BX247879.5| Zebrafish DNA sequence from clone CH211-195N15, complete sequence
          Length = 184509

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ttgtgatatagatgtgtcat 161
             ||||||||||||||||||||
Sbjct: 92566 ttgtgatatagatgtgtcat 92585
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>gb|AF086789.1|AF086789 Homo sapiens mitochondrial aconitase (ACO2) pseudogene, nuclear
           pseudogene, complete sequence
          Length = 2837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 agcaaatccagctgaaagag 294
           ||||||||||||||||||||
Sbjct: 68  agcaaatccagctgaaagag 87
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>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete
             sequence
          Length = 208363

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttaagtgactctttctgaac 32
             ||||||||||||||||||||
Sbjct: 11244 ttaagtgactctttctgaac 11263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,461,889
Number of Sequences: 3902068
Number of extensions: 3461889
Number of successful extensions: 58303
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58211
Number of HSP's gapped (non-prelim): 89
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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