ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4a22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197204.1| Oryza sativa (japonica cultivar-group) putative PKCq-interacting protein (OSJNBa0078O01.9), mRNA Length = 1840 Score = 476 bits (240), Expect = e-131 Identities = 336/368 (91%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 188 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 247 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 126 ||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 248 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 307 Query: 127 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 186 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 308 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 367 Query: 187 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 246 | |||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||| Sbjct: 368 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 427 Query: 247 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 306 |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| || Sbjct: 428 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 487 Query: 307 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 366 || |||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| Sbjct: 488 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 547 Query: 367 tcttctgc 374 ||||||| Sbjct: 548 gcttctgc 555 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 590 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 649 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 650 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 709 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 710 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 769 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 770 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 828
>dbj|AK105626.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C12, full insert sequence Length = 1441 Score = 476 bits (240), Expect = e-131 Identities = 336/368 (91%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 154 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 213 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 126 ||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 214 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 273 Query: 127 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 186 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 274 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 333 Query: 187 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 246 | |||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||| Sbjct: 334 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 393 Query: 247 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 306 |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| || Sbjct: 394 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 453 Query: 307 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 366 || |||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| Sbjct: 454 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 513 Query: 367 tcttctgc 374 ||||||| Sbjct: 514 gcttctgc 521 Score = 260 bits (131), Expect = 5e-66 Identities = 212/239 (88%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 556 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 615 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 616 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 675 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 676 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 735 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 736 tggccgacttttcctcagctctactgcaaaggtgagctgcttggcggatgtgatattgt 794
>dbj|AK059628.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H12, full insert sequence Length = 1815 Score = 476 bits (240), Expect = e-131 Identities = 336/368 (91%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 198 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 257 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 126 ||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 258 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 317 Query: 127 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 186 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 318 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 377 Query: 187 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 246 | |||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||| Sbjct: 378 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 437 Query: 247 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 306 |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| || Sbjct: 438 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 497 Query: 307 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 366 || |||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| Sbjct: 498 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 557 Query: 367 tcttctgc 374 ||||||| Sbjct: 558 gcttctgc 565 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 600 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 659 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 660 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 719 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 720 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 779 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 780 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 838
>dbj|AK067982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121J12, full insert sequence Length = 1949 Score = 468 bits (236), Expect = e-128 Identities = 335/368 (91%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 198 gcgcgggctgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 257 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 126 ||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 258 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 317 Query: 127 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 186 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 318 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 377 Query: 187 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 246 | |||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||| Sbjct: 378 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 437 Query: 247 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 306 |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| || Sbjct: 438 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 497 Query: 307 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 366 || |||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| Sbjct: 498 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 557 Query: 367 tcttctgc 374 ||||||| Sbjct: 558 gcttctgc 565 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 600 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 659 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 660 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 719 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 720 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 779 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 780 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 838
>gb|AY105414.1| Zea mays PCO079032 mRNA sequence Length = 2077 Score = 432 bits (218), Expect = e-118 Identities = 326/362 (90%) Strand = Plus / Plus Query: 22 gtgcacttctgggcggcctggtgcgaggcctccaagcagatggacgaggtcttcgcccac 81 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 329 gtgcacttctgggcgtcctggtgcgaggcgtccaagcagatggacgaggtcttcgcgcac 388 Query: 82 ctcgccgtcgacttcccccacgcgctcttcctcagggttgaagctgaagaacaaccggaa 141 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct: 389 ctcgccgtcgacttcccccacgcggccttcctccgggttgaagctgaagaacaacctgaa 448 Query: 142 atttcagaggcatatggagttacagcagtgccatactttgttttctgcaaggaaggcaaa 201 || |||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 449 atatcagaggcgtatggagttacagcggtgccatattttgttttctgcaaggaaggaaaa 508 Query: 202 cctgttgataccttggagggcgcaaacccagccagcctggccaataaggttgcaaagtta 261 ||| ||||| |||||||| | ||||||||||||||||||||||||||||||||| || Sbjct: 509 attgtcgatactttggagggagtaaacccagccagcctggccaataaggttgcaaaagta 568 Query: 262 gctgggcctgccaatgttgctcagtctgctgtacctgctagcttgggggtggctgccggg 321 ||||||||||| | ||||||| |||||||||||||||||||| | || || ||||| ||| Sbjct: 569 gctgggcctgctagtgttgctgagtctgctgtacctgctagccttggagtcgctgctggg 628 Query: 322 cctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatcttctgctgctgaa 381 ||||||||||| ||||| ||||| | ||||||| || ||||||||||||||||| |||| Sbjct: 629 cctgctgtacttgaaaacatccaaaagatggcacagcgaaatggatcttctgctgttgaa 688 Query: 382 ag 383 || Sbjct: 689 ag 690 Score = 274 bits (138), Expect = 3e-70 Identities = 222/250 (88%) Strand = Plus / Plus Query: 389 tgaagaagcgtttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaa 448 |||| ||||| |||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 720 tgaataagcgattggagcagcttgtcaattcccatcccgtgtttttatttatgaagggaa 779 Query: 449 atccaggagaaccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaag 508 |||| | ||||||||||||| |||||||| | ||| ||||||||||||||||||||| Sbjct: 780 ccccagaacaaccaaggtgtggtttcagccgtaaagtgattgacattttgaagcaggaag 839 Query: 509 gtgttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaaga 568 | || ||||||||||||||||||||||| |||||||||| || |||||||| |||||| Sbjct: 840 gggtgaaatttgggagctttgacatccttacagataatgatgttcgtgaaggtatgaaga 899 Query: 569 agttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggat 628 ||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 900 agttctccaactggcccacttttcctcaactgtactgcaaaggcgagctgcttggtggat 959 Query: 629 gtgatattgt 638 |||||||||| Sbjct: 960 gtgatattgt 969
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 86286 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 86345 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 86346 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 86405 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 86406 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 86465 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 86466 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 86524 Score = 206 bits (104), Expect = 6e-50 Identities = 164/184 (89%) Strand = Plus / Plus Query: 191 aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 250 ||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 86068 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 86127 Query: 251 ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 310 |||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| | Sbjct: 86128 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 86187 Query: 311 tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 370 ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| ||| Sbjct: 86188 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 86247 Query: 371 ctgc 374 |||| Sbjct: 86248 ctgc 86251 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 84047 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 84106 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 119 ||||||||||| |||||||||||||||||| ||||||| |||||||| |||| Sbjct: 84107 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 84159 Score = 117 bits (59), Expect = 5e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 117 ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 176 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 85333 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 85392 Query: 177 ctttgttttct 187 |||||||||| Sbjct: 85393 ttttgttttct 85403
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 18582875 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 18582934 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 18582935 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 18582994 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 18582995 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 18583054 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 18583055 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 18583113 Score = 206 bits (104), Expect = 6e-50 Identities = 164/184 (89%) Strand = Plus / Plus Query: 191 aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 250 ||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 18582657 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 18582716 Query: 251 ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 310 |||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| | Sbjct: 18582717 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 18582776 Query: 311 tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 370 ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| ||| Sbjct: 18582777 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 18582836 Query: 371 ctgc 374 |||| Sbjct: 18582837 ctgc 18582840 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 18580636 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 18580695 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 119 ||||||||||| |||||||||||||||||| ||||||| |||||||| |||| Sbjct: 18580696 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 18580748 Score = 117 bits (59), Expect = 5e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 117 ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 176 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 18581922 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 18581981 Query: 177 ctttgttttct 187 |||||||||| Sbjct: 18581982 ttttgttttct 18581992
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 400 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 459 |||||||||||||||||||||||||| ||| |||||||||||||||||| || | || Sbjct: 18593328 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 18593387 Query: 460 ccaaggtgtgggttcagccgaagggtggttgacattttgaagcaggaaggtgttgaattt 519 ||||||||||| ||||| |||| || |||||| |||||||||||||||| ||||||||| Sbjct: 18593388 ccaaggtgtggtttcagtcgaaaagtagttgacgttttgaagcaggaaggagttgaattt 18593447 Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||| ||| Sbjct: 18593448 gggagctttgacatcctaacagataacgatgtacgtgaaggaatgaaaaagttctcaaac 18593507 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 18593508 tggccgacttttcctcagctctactgcaaaggtgagctgcttggtggatgtgatattgt 18593566 Score = 206 bits (104), Expect = 6e-50 Identities = 164/184 (89%) Strand = Plus / Plus Query: 191 aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 250 ||||||| ||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 18593110 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 18593169 Query: 251 ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 310 |||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| | Sbjct: 18593170 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 18593229 Query: 311 tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 370 ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| ||| Sbjct: 18593230 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 18593289 Query: 371 ctgc 374 |||| Sbjct: 18593290 ctgc 18593293 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Plus Query: 7 gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 66 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 18591089 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 18591148 Query: 67 gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 119 ||||||||||| |||||||||||||||||| ||||||| |||||||| |||| Sbjct: 18591149 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 18591201 Score = 117 bits (59), Expect = 5e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 117 ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 176 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 18592375 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 18592434 Query: 177 ctttgttttct 187 |||||||||| Sbjct: 18592435 ttttgttttct 18592445
>gb|BT018250.1| Zea mays clone EL01N0563G06.c mRNA sequence Length = 866 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 520 gggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaagttctctaac 579 |||||||||||||||||| |||||||||| | ||||||| ||||||||||||| ||| Sbjct: 14 gggagctttgacatccttacagataatgatgcttgtgaaggtatgaagaagttctccaac 73 Query: 580 tggccaacttttcctcagttgtactgcaaaggtgagctgcttggtggatgtgatattgt 638 ||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||| Sbjct: 74 tggcccacttttcctcaactgtactgcaaaggcgagctgcttgtcggatgtgatattgt 132
>ref|NM_116733.2| Arabidopsis thaliana electron transporter AT4G04950 mRNA, complete cds Length = 1708 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 511 gttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaag 570 ||||| ||||| || |||||||| || || ||||| ||||| || || || ||||||| Sbjct: 605 gttgattttggaagttttgacatactatcggataacgaagtgcgagagggtttgaagaaa 664 Query: 571 ttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtgga 627 ||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 665 ttctctaactggccaacgtttcctcagctgtactgcaacggagagcttcttggtgga 721 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 565 aagaagttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggt 624 ||||| ||||| ||||||||||||||||||||| | |||| |||||||||| | |||| Sbjct: 1370 aagaatttctcaaactggccaacttttcctcagctatactacaaaggtgagttaattgga 1429 Query: 625 ggatgtgatat 635 ||||||||||| Sbjct: 1430 ggatgtgatat 1440
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 511 gttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaag 570 ||||| ||||| || |||||||| || || ||||| ||||| || || || ||||||| Sbjct: 50784 gttgattttggaagttttgacatactatcggataacgaagtgcgagagggtttgaagaaa 50725 Query: 571 ttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtgga 627 ||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 50724 ttctctaactggccaacgtttcctcagctgtactgcaacggagagcttcttggtgga 50668 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 565 aagaagttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggt 624 ||||| ||||| ||||||||||||||||||||| | |||| |||||||||| | |||| Sbjct: 50019 aagaatttctcaaactggccaacttttcctcagctatactacaaaggtgagttaattgga 49960 Query: 625 ggatgtgatat 635 ||||||||||| Sbjct: 49959 ggatgtgatat 49949
>gb|AY142003.1| Arabidopsis thaliana At4g04950/T1J1_6 mRNA, complete cds Length = 1467 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 511 gttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaag 570 ||||| ||||| || |||||||| || || ||||| ||||| || || || ||||||| Sbjct: 580 gttgattttggaagttttgacatactatcggataacgaagtgcgagagggtttgaagaaa 639 Query: 571 ttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtgga 627 ||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 640 ttctctaactggccaacgtttcctcagctgtactgcaacggagagcttcttggtgga 696 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 565 aagaagttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggt 624 ||||| ||||| ||||||||||||||||||||| | |||| |||||||||| | |||| Sbjct: 1345 aagaatttctcaaactggccaacttttcctcagctatactacaaaggtgagttaattgga 1404 Query: 625 ggatgtgatat 635 ||||||||||| Sbjct: 1405 ggatgtgatat 1415
>gb|AY058202.1| Arabidopsis thaliana AT4g04950/T1J1_6 mRNA, complete cds Length = 1648 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 511 gttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaag 570 ||||| ||||| || |||||||| || || ||||| ||||| || || || ||||||| Sbjct: 605 gttgattttggaagttttgacatactatcggataacgaagtgcgagagggtttgaagaaa 664 Query: 571 ttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtgga 627 ||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 665 ttctctaactggccaacgtttcctcagctgtactgcaacggagagcttcttggtgga 721 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 565 aagaagttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggt 624 ||||| ||||| ||||||||||||||||||||| | |||| |||||||||| | |||| Sbjct: 1370 aagaatttctcaaactggccaacttttcctcagctatactacaaaggtgagttaattgga 1429 Query: 625 ggatgtgatat 635 ||||||||||| Sbjct: 1430 ggatgtgatat 1440
>gb|AF128393.1|T1J1 Arabidopsis thaliana BAC T1J1 Length = 53778 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 511 gttgaatttgggagctttgacatcctttcagataatgaagtacgtgaagggctgaagaag 570 ||||| ||||| || |||||||| || || ||||| ||||| || || || ||||||| Sbjct: 42837 gttgattttggaagttttgacatactatcggataacgaagtgcgagagggtttgaagaaa 42778 Query: 571 ttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggtgga 627 ||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 42777 ttctctaactggccaacgtttcctcagctgtactgcaacggagagcttcttggtgga 42721 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 565 aagaagttctctaactggccaacttttcctcagttgtactgcaaaggtgagctgcttggt 624 ||||| ||||| ||||||||||||||||||||| | |||| |||||||||| | |||| Sbjct: 42072 aagaatttctcaaactggccaacttttcctcagctatactacaaaggtgagttaattgga 42013 Query: 625 ggatgtgatat 635 ||||||||||| Sbjct: 42012 ggatgtgatat 42002
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 3 cggcgcgcgggccgccgcggtgca 26 |||||||||||||||||||||||| Sbjct: 3458278 cggcgcgcgggccgccgcggtgca 3458255
>dbj|AK116927.1| Ciona intestinalis cDNA, clone:cits002e20, full insert sequence Length = 1342 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 557 aagggctgaagaagttctctaactggccaacttttcctcagtt 599 |||| |||||| |||| || ||||||||||||| ||||||||| Sbjct: 573 aaggactgaaggagttttcaaactggccaacttatcctcagtt 615
>dbj|AK114260.1| Ciona intestinalis cDNA, clone:cicl050b01, full insert sequence Length = 2430 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 557 aagggctgaagaagttctctaactggccaacttttcctcagtt 599 |||| |||||| |||| || ||||||||||||| ||||||||| Sbjct: 576 aaggactgaaggagttttcaaactggccaacttatcctcagtt 618
>gb|AC127689.4| Mus musculus BAC clone RP24-206I5 from chromosome 5, complete sequence Length = 155413 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 gaaaaagtccaagaaatggcac 355 |||||||||||||||||||||| Sbjct: 18372 gaaaaagtccaagaaatggcac 18351
>gb|AC158945.6| Mus musculus chromosome 5, clone RP23-286J20, complete sequence Length = 210182 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 gaaaaagtccaagaaatggcac 355 |||||||||||||||||||||| Sbjct: 5746 gaaaaagtccaagaaatggcac 5767
>gb|AC159012.2| Gallus gallus BAC clone CH261-5N5 from chromosome unknown, complete sequence Length = 231341 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 497 tgaagcaggaaggtgttgaatt 518 |||||||||||||||||||||| Sbjct: 132535 tgaagcaggaaggtgttgaatt 132556
>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14, complete sequence Length = 139631 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 atcttctgctgctgaaagtac 386 ||||||||||||||||||||| Sbjct: 74747 atcttctgctgctgaaagtac 74727
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 agggtggttgacattttgaag 501 ||||||||||||||||||||| Sbjct: 168339 agggtggttgacattttgaag 168359
>emb|Z99107.2|BSUB0004 Bacillus subtilis complete genome (section 4 of 21): from 611631 to 813719 Length = 202089 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 485 tggttgacattttgaagcaggaagg 509 ||||||||||||||||||| ||||| Sbjct: 17346 tggttgacattttgaagcatgaagg 17370
>gb|AF443292.1| Reindeer papillomavirus, complete genome Length = 8090 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 cagttgtactgcaaaggtgag 615 ||||||||||||||||||||| Sbjct: 3755 cagttgtactgcaaaggtgag 3735
>gb|AY278739.1| Rattus norvegicus paraplegin (Spg7) mRNA, complete cds Length = 2479 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 cctcagggttgaagctgaagaacaa 135 ||||||||||||||| ||||||||| Sbjct: 359 cctcagggttgaagcagaagaacaa 383
>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14, complete sequence Length = 128658 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 atcttctgctgctgaaagtac 386 ||||||||||||||||||||| Sbjct: 42691 atcttctgctgctgaaagtac 42711
>gb|S74218.1| E9=transforming gene [reindeer papillomavirus RPV, Genomic, 740 nt] Length = 740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 cagttgtactgcaaaggtgag 615 ||||||||||||||||||||| Sbjct: 54 cagttgtactgcaaaggtgag 34
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0043E10, complete sequence Length = 124591 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cgccgtcgacttcccccacgc 104 ||||||||||||||||||||| Sbjct: 67129 cgccgtcgacttcccccacgc 67149
>gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I14, complete sequence Length = 115932 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 aggcatatggagttacagcagtgcc 173 |||||||||||| |||||||||||| Sbjct: 40140 aggcatatggagatacagcagtgcc 40116
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cgccgtcgacttcccccacgc 104 ||||||||||||||||||||| Sbjct: 22127575 cgccgtcgacttcccccacgc 22127555
>ref|NM_181388.2| Rattus norvegicus spastic paraplegia 7 homolog (human) (Spg7), mRNA Length = 2479 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 cctcagggttgaagctgaagaacaa 135 ||||||||||||||| ||||||||| Sbjct: 359 cctcagggttgaagcagaagaacaa 383
>gb|U18922.1|SCE9163 Saccharomyces cerevisiae chromosome V cosmids 9163 and 9132 Length = 64044 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 563 tgaagaagttctctaactggccaacttttcctcagtt 599 |||||||||| ||| | ||||| |||||||||||||| Sbjct: 28912 tgaagaagttttctgattggcctacttttcctcagtt 28876
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome Length = 641454 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 575 ctaactggccaacttttcctcagtt 599 |||| |||||||||||||||||||| Sbjct: 204052 ctaattggccaacttttcctcagtt 204076
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 gtgttgaatttgggagctttg 529 ||||||||||||||||||||| Sbjct: 197061 gtgttgaatttgggagctttg 197081
>gb|DQ331965.1| Synthetic construct Saccharomyces cerevisiae clone FLH201060.01X GRX4 gene, complete sequence Length = 735 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 563 tgaagaagttctctaactggccaacttttcctcagtt 599 |||||||||| ||| | ||||| |||||||||||||| Sbjct: 608 tgaagaagttttctgattggcctacttttcctcagtt 644
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cgccgtcgacttcccccacgc 104 ||||||||||||||||||||| Sbjct: 22437486 cgccgtcgacttcccccacgc 22437466
>gb|M18176.1|PPRE5A Reindeer papillomavirus E5 ORF region Length = 207 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 cagttgtactgcaaaggtgag 615 ||||||||||||||||||||| Sbjct: 96 cagttgtactgcaaaggtgag 76
>dbj|D88802.1| Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds Length = 36308 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 485 tggttgacattttgaagcaggaagg 509 ||||||||||||||||||| ||||| Sbjct: 15447 tggttgacattttgaagcatgaagg 15471
>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence Length = 156244 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ctgctagcttgggggtggct 315 |||||||||||||||||||| Sbjct: 106649 ctgctagcttgggggtggct 106668
>gb|BT017401.1| Zea mays clone EL01N0329A09.c mRNA sequence Length = 1199 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atccaggagaaccaaggtgt 468 |||||||||||||||||||| Sbjct: 869 atccaggagaaccaaggtgt 888
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tcttcgcccacctcgccgtc 90 |||||||||||||||||||| Sbjct: 728189 tcttcgcccacctcgccgtc 728170
>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence Length = 168158 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tcccatcctgtcatcttatt 437 |||||||||||||||||||| Sbjct: 126122 tcccatcctgtcatcttatt 126141
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 ctttcagataatgaagtacgtgaa 558 |||||| ||||||||||||||||| Sbjct: 967478 ctttcacataatgaagtacgtgaa 967455
>ref|XM_389623.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09447.1) partial mRNA Length = 2970 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ctccaagcagatggacgagg 70 |||||||||||||||||||| Sbjct: 2895 ctccaagcagatggacgagg 2914
>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence Length = 163978 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 actttgttttctgcaaggaa 195 |||||||||||||||||||| Sbjct: 119332 actttgttttctgcaaggaa 119351
>gb|DQ096844.1| Xenopus laevis lapl06 mRNA, complete sequence Length = 843 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ggaaggcaaacctgttgata 211 |||||||||||||||||||| Sbjct: 556 ggaaggcaaacctgttgata 575
>gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, complete sequence Length = 113199 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gccagcctggccaataaggt 251 |||||||||||||||||||| Sbjct: 23992 gccagcctggccaataaggt 23973
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence Length = 228283 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aagcaggaaggtgttgaatt 518 |||||||||||||||||||| Sbjct: 38132 aagcaggaaggtgttgaatt 38151
>gb|AC099034.1| Drosophila melanogaster, chromosome 2R, region 58B-58C, BAC clone BACR30O14, complete sequence Length = 186432 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 aactggccaacttttcctca 596 |||||||||||||||||||| Sbjct: 73131 aactggccaacttttcctca 73150
>dbj|AK048306.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130048B16 product:unclassifiable, full insert sequence Length = 2785 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 aagcaggaaggtgttgaatt 518 |||||||||||||||||||| Sbjct: 1541 aagcaggaaggtgttgaatt 1560
>emb|BX935083.2| Gallus gallus finished cDNA, clone ChEST74d16 Length = 984 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ttgaatttgggagctttgac 531 |||||||||||||||||||| Sbjct: 839 ttgaatttgggagctttgac 820
>gb|AC158624.4| Mus musculus BAC RP23-299I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174188 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 tctaactggccaacttttcc 593 |||||||||||||||||||| Sbjct: 102463 tctaactggccaacttttcc 102482
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gcgcgcgggccgccgcggtg 24 |||||||||||||||||||| Sbjct: 3290947 gcgcgcgggccgccgcggtg 3290928
>gb|AC120860.7| Mus musculus chromosome 1, clone RP23-26I10, complete sequence Length = 188326 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 aagcaggaaggtgttgaatt 518 |||||||||||||||||||| Sbjct: 108654 aagcaggaaggtgttgaatt 108635
>gb|AY108979.1| Zea mays PCO080401 mRNA sequence Length = 602 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atccaggagaaccaaggtgt 468 |||||||||||||||||||| Sbjct: 519 atccaggagaaccaaggtgt 538
>gb|AE003455.3| Drosophila melanogaster chromosome 2R, section 63 of 73 of the complete sequence Length = 291250 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 aactggccaacttttcctca 596 |||||||||||||||||||| Sbjct: 277099 aactggccaacttttcctca 277118
>gb|AC153968.3| Mus musculus 10 BAC RP24-343C11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151710 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 tctaactggccaacttttcc 593 |||||||||||||||||||| Sbjct: 38163 tctaactggccaacttttcc 38182
>gb|AC004368.1|AC004368 Drosophila melanogaster DNA sequence (P1 DS05295 (D64)), complete sequence Length = 89885 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 aactggccaacttttcctca 596 |||||||||||||||||||| Sbjct: 58176 aactggccaacttttcctca 58157
>emb|CT032251.1| Platynereis dumerilii EST IB0AAA42CD01FM1 Length = 821 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 545 atgaagtacgtgaagggctgaagaagttctctaactggcc 584 |||||||||| |||| |||||||||||||| || ||||| Sbjct: 723 atgaagtacgccaaggtctgaagaagttctccaattggcc 684
>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence Length = 233632 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tcccatcctgtcatcttatt 437 |||||||||||||||||||| Sbjct: 14204 tcccatcctgtcatcttatt 14223
>emb|AL928922.7| Mouse DNA sequence from clone RP23-431J22 on chromosome 2, complete sequence Length = 203047 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 497 tgaagcaggaaggtgttgaatttg 520 |||||||||||||| ||||||||| Sbjct: 185531 tgaagcaggaaggtcttgaatttg 185554 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,524,051 Number of Sequences: 3902068 Number of extensions: 6524051 Number of successful extensions: 167893 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167287 Number of HSP's gapped (non-prelim): 599 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
