ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal3l21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB025597.1| Hordeum vulgare IDI1 mRNA, complete cds Length = 997 Score = 1263 bits (637), Expect = 0.0 Identities = 637/637 (100%) Strand = Plus / Plus Query: 2 gagaggaaggaaggaaagcagaggagagagcagttgcgcgggagactgcgaggggccgcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 gagaggaaggaaggaaagcagaggagagagcagttgcgcgggagactgcgaggggccgcc 76 Query: 62 gccatggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggat 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gccatggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggat 136 Query: 122 gacagtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctctt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gacagtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctctt 196 Query: 182 gcaaaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 gcaaaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaa 256 Query: 242 gatgagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgat 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gatgagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgat 316 Query: 302 gtatgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 gtatgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacac 376 Query: 362 ttgcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgagg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 ttgcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgagg 436 Query: 422 gaccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 gaccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcct 496 Query: 482 gcaggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 gcaggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctc 556 Query: 542 tttgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctaga 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tttgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctaga 616 Query: 602 aaggagtatgtcgacaagattatcaacagaggtggga 638 ||||||||||||||||||||||||||||||||||||| Sbjct: 617 aaggagtatgtcgacaagattatcaacagaggtggga 653
>dbj|AK099497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027P03, full insert sequence Length = 1112 Score = 737 bits (372), Expect = 0.0 Identities = 522/572 (91%) Strand = Plus / Plus Query: 65 atggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatgac 124 ||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 63 atggagaaccagttccaggatggcaaggaggaggtcatcgaagcttggtacatggatgac 122 Query: 125 agtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgca 184 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 123 agtgaagaggaccagaggcttcctcatcatcgtgagcccaaagaattcattcctcttagc 182 Query: 185 aaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaagat 244 ||||||||||| ||||| | |||||||| ||| ||||||||| |||||||||| ||| Sbjct: 183 aaactttcagagttaggaatattaagctggcgcctgaatgctgatgactgggagaatgat 242 Query: 245 gagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgta 304 ||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 243 gagaacctcaagaaaatccgtgaggccaggggatactcttacatggatatttgtgatgtg 302 Query: 305 tgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacacttg 364 ||||| || ||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 303 tgtccagaaaagctgccaaactatgaggctaagctgaaaaatttctttgaagaacacttg 362 Query: 365 catactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgagggac 424 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 363 catactgatgaagagatacgctattgtcttgagggaagtggatacttcgatgtcagggac 422 Query: 425 caaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgca 484 ||||| || |||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 423 caaaatgatcagtggatccgtgtagcagtgaagaaagggggcatgattgttttgcctgcg 482 Query: 485 ggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctcttt 544 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 ggaatgtatcaccgcttcacattggacagtgacaactacatcaaggcaatgcggctcttt 542 Query: 545 gtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaag 604 ||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 543 gtgggagagcctgtctggacgccgtacaaccgtccccatgaccatctgccagctagaaag 602 Query: 605 gagtatgtcgacaagattatcaacagaggtgg 636 ||||||||||| || ||||||||||| ||||| Sbjct: 603 gagtatgtcgaaaaaattatcaacaggggtgg 634
>gb|AF068332.1| Oryza sativa acireductone dioxygenase 2 (ARD2) mRNA, complete cds Length = 980 Score = 737 bits (372), Expect = 0.0 Identities = 522/572 (91%) Strand = Plus / Plus Query: 65 atggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatgac 124 ||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 139 atggagaaccagttccaggatggcaaggaggaggtcatcgaagcttggtacatggatgac 198 Query: 125 agtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgca 184 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 199 agtgaagaggaccagaggcttcctcatcatcgtgagcccaaagaattcattcctcttagc 258 Query: 185 aaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaagat 244 ||||||||||| ||||| | |||||||| ||| ||||||||| |||||||||| ||| Sbjct: 259 aaactttcagagttaggaatattaagctggcgcctgaatgctgatgactgggagaatgat 318 Query: 245 gagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgta 304 ||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 319 gagaacctcaagaaaatccgtgaggccaggggatactcttacatggatatttgtgatgtg 378 Query: 305 tgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacacttg 364 ||||| || ||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 379 tgtccagaaaagctgccaaactatgaggctaagctgaaaaatttctttgaagaacacttg 438 Query: 365 catactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgagggac 424 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 439 catactgatgaagagatacgctattgtcttgagggaagtggatacttcgatgtcagggac 498 Query: 425 caaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgca 484 ||||| || |||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 499 caaaatgatcagtggatccgtgtagcagtgaagaaagggggcatgattgttttgcctgcg 558 Query: 485 ggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctcttt 544 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 559 ggaatgtatcaccgcttcacattggacagtgacaactacatcaaggcaatgcggctcttt 618 Query: 545 gtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaag 604 ||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 619 gtgggagagcctgtctggacgccgtacaaccgtccccatgaccatctgccagctagaaag 678 Query: 605 gagtatgtcgacaagattatcaacagaggtgg 636 ||||||||||| || ||||||||||| ||||| Sbjct: 679 gagtatgtcgaaaaaattatcaacaggggtgg 710
>gb|AY955841.1| Oryza sativa (japonica cultivar-group) aci-reductone dioxygenase-like protein (ARD) mRNA, complete cds Length = 700 Score = 729 bits (368), Expect = 0.0 Identities = 521/572 (91%) Strand = Plus / Plus Query: 65 atggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatgac 124 ||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 94 atggagaaccagttccaggatggcaaggaggaggtcatcgaagcttggtacatggatgac 153 Query: 125 agtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgca 184 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 154 agtgaagaggaccagaggcttcctcatcatcgtgagcccaaagaattcattcctcttagc 213 Query: 185 aaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaagat 244 ||||||||||| ||||| | |||||||| ||| ||||||||| |||||||||| ||| Sbjct: 214 aaactttcagagttaggaatattaagctggcgcctgaatgctgatgactgggagaatgat 273 Query: 245 gagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgta 304 ||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 274 gagaacctcaagaaaatccgtgaggccaggggatactcttacatggatatttgtgatgtg 333 Query: 305 tgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacacttg 364 ||||| || ||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 334 tgtccagaaaagctgccaaactatgaggctaagctgaaaaatttctttgaagaacacttg 393 Query: 365 catactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgagggac 424 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 394 catactgatgaagagatacgctattgtcttgagggaagtggatacttcgatgtcagggac 453 Query: 425 caaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgca 484 ||||| || |||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 454 caaaatgatcagtggatccgtgtagcagtgaagaaagggggcatgattgttttgcctgcg 513 Query: 485 ggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctcttt 544 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 514 ggaatgtatcaccgcttcacattggacagtgacaactacatcaaggcaatgcggctcttt 573 Query: 545 gtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaag 604 ||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 574 gtgggagagcctgtctggacgccgtacaaccgtccccatgaccatctgccagctagaaag 633 Query: 605 gagtatgtcgacaagattatcaacagaggtgg 636 |||||| |||| || ||||||||||| ||||| Sbjct: 634 gagtatctcgaaaaaattatcaacaggggtgg 665
>gb|AY103746.1| Zea mays PCO075536 mRNA sequence Length = 1097 Score = 607 bits (306), Expect = e-170 Identities = 498/562 (88%) Strand = Plus / Plus Query: 75 agttccaggatggcaaggagcaggtcatccaagcatggtacatggatgacagtgaagagg 134 ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 215 agttccaggttggcaaggaggaggtcatccaagcatggtacatggacgacagtgaagagg 274 Query: 135 accagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgcaaaactttcag 194 ||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| | Sbjct: 275 accagaggcttcctcatcatcgtgagcccaaagaattcattcctctcgacaaactttccg 334 Query: 195 aattaggtgttgtaagctggaacctaaatgctgataactgggagaaagatgagaatctca 254 || |||| | |||||||| ||||||||||||| | |||||||| |||||||| |||| Sbjct: 335 aactaggaatattaagctggcgcctaaatgctgatgattgggagaatgatgagaacctca 394 Query: 255 agaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgtatgtccggaga 314 ||||||| ||||| |||||||| |||||||| |||||||||| ||||| || || |||| Sbjct: 395 agaaaattcgtgaagccaggggttactcttacatggacatttgtgatgtgtgcccagaga 454 Query: 315 agttgccaaactacgaggccaagctgaagaatttctttgaagaacacttgcatactgatg 374 |||||||||| |||||||| ||| | |||||||||||||||||||||||||||||||||| Sbjct: 455 agttgccaaattacgaggctaagataaagaatttctttgaagaacacttgcatactgatg 514 Query: 375 aagagatacgctattgtcttgagggcagtggatactttgatgtgagggaccaaaacgaac 434 |||||||||| ||||| |||||||| || || ||||||||||||||||||||| | || | Sbjct: 515 aagagatacgatattgccttgagggtagcggctactttgatgtgagggaccaagatgatc 574 Query: 435 agtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgcaggaatgtatc 494 ||||||||||| |||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 575 agtggatccgtgtagcggtaaagaaagggggcatgatcgttttgcctgcaggaatgtatc 634 Query: 495 accgctttacattggatagtgacaactacatcaaggcaatgcggctctttgtgggagagc 554 | |||||||| |||||||||||||||||||||||||||||||| || |||||||| |||| Sbjct: 635 atcgctttacgttggatagtgacaactacatcaaggcaatgcgtctatttgtgggtgagc 694 Query: 555 ccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaaggagtatgtcg 614 | ||||||| || |||||||| || |||||||||||||| ||||| |||||||| |||| Sbjct: 695 ctgtctggacaccatacaatcgtccgcatgaccatctcccggctaggaaggagtacgtcg 754 Query: 615 acaagattatcaacagaggtgg 636 | || || |||||| ||||||| Sbjct: 755 agaaaatcatcaaccgaggtgg 776
>gb|AF050200.1| Oryza sativa acireductone dioxygenase 1 (ARD1) mRNA, complete cds Length = 872 Score = 406 bits (205), Expect = e-110 Identities = 460/545 (84%) Strand = Plus / Plus Query: 64 catggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatga 123 |||||||||||| ||||||||||| ||| | |||| || ||||||||||||||||||| Sbjct: 68 catggagaacgaattccaggatggtaagacggaggtgatagaagcatggtacatggatga 127 Query: 124 cagtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgc 183 || ||||||||||||||||||||||||||||| || |||||||| ||||||||| ||| Sbjct: 128 tagcgaagaggaccagaggcttcctcatcaccgcgaacccaaagaattcattcctgttga 187 Query: 184 aaaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaaga 243 || ||| ||||| |||| || | |||||| ||||||| |||||||||||||||| Sbjct: 188 taagcttacagaactaggagtaatcagctggcgcctaaatcctgataactgggagaattg 247 Query: 244 tgagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgt 303 ||||| || |||| |||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 248 cgagaacctgaagagaatccgcgaagccagaggttactcttatgtggacatttgtgatgt 307 Query: 304 atgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacactt 363 || || |||||| ||||||| || || | ||| | |||| |||||||||||||||| | Sbjct: 308 gtgcccagagaagctgccaaattatgaaactaagatcaagagtttctttgaagaacacct 367 Query: 364 gcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgaggga 423 |||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| || Sbjct: 368 gcataccgatgaagaaatacgctattgtcttgaagggagtggatactttgatgtgagaga 427 Query: 424 ccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgc 483 |||||| || |||||||| ||||||||| | |||||||| |||||||||||| ||||||| Sbjct: 428 ccaaaatgatcagtggattcgtatagcactgaagaaaggaggcatgattgttctgcctgc 487 Query: 484 aggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctctt 543 ||| ||||| ||||||||||| ||||| | |||||||| |||||||||||||| || || Sbjct: 488 agggatgtaccaccgctttacgttggacaccgacaactatatcaaggcaatgcgactgtt 547 Query: 544 tgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaa 603 ||| || || || | ||||| || ||||| || |||||||||||||| || || ||||| Sbjct: 548 tgttggcgatcctgtttggacaccctacaaccgtccccatgaccatcttcctgcaagaaa 607 Query: 604 ggagt 608 ||||| Sbjct: 608 ggagt 612
>dbj|AK103834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148E16, full insert sequence Length = 913 Score = 398 bits (201), Expect = e-108 Identities = 459/545 (84%) Strand = Plus / Plus Query: 64 catggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatga 123 |||||||||||| ||||||||||| ||| | |||| || ||||||||||||||||||| Sbjct: 85 catggagaacgaattccaggatggtaagacggaggtgatagaagcatggtacatggatga 144 Query: 124 cagtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgc 183 || ||||||||||||||||||||||||||||| || |||||||| ||||||| | ||| Sbjct: 145 tagcgaagaggaccagaggcttcctcatcaccgcgaacccaaagaattcattcatgttga 204 Query: 184 aaaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaaga 243 || ||| ||||| |||| || | |||||| ||||||| |||||||||||||||| Sbjct: 205 taagcttacagaactaggagtaatcagctggcgcctaaatcctgataactgggagaattg 264 Query: 244 tgagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgt 303 ||||| || |||| |||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 265 cgagaacctgaagagaatccgcgaagccagaggttactcttatgtggacatttgtgatgt 324 Query: 304 atgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacactt 363 || || |||||| ||||||| || || | ||| | |||| |||||||||||||||| | Sbjct: 325 gtgcccagagaagctgccaaattatgaaactaagatcaagagtttctttgaagaacacct 384 Query: 364 gcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgaggga 423 |||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| || Sbjct: 385 gcataccgatgaagaaatacgctattgtcttgaagggagtggatactttgatgtgagaga 444 Query: 424 ccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgc 483 |||||| || |||||||| ||||||||| | |||||||| |||||||||||| ||||||| Sbjct: 445 ccaaaatgatcagtggattcgtatagcactgaagaaaggaggcatgattgttctgcctgc 504 Query: 484 aggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctctt 543 ||| ||||| ||||||||||| ||||| | |||||||| |||||||||||||| || || Sbjct: 505 agggatgtaccaccgctttacgttggacaccgacaactatatcaaggcaatgcgactgtt 564 Query: 544 tgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaa 603 ||| || || || | ||||| || ||||| || |||||||||||||| || || ||||| Sbjct: 565 tgttggcgatcctgtttggacaccctacaaccgtccccatgaccatcttcctgcaagaaa 624 Query: 604 ggagt 608 ||||| Sbjct: 625 ggagt 629
>dbj|AK102331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090N01, full insert sequence Length = 901 Score = 398 bits (201), Expect = e-108 Identities = 459/545 (84%) Strand = Plus / Plus Query: 64 catggagaacgagttccaggatggcaaggagcaggtcatccaagcatggtacatggatga 123 |||||||||||| ||||||||||| ||| | |||| || ||||||||||||||||||| Sbjct: 92 catggagaacgaattccaggatggtaagacggaggtgatagaagcatggtacatggatga 151 Query: 124 cagtgaagaggaccagaggcttcctcatcaccgtgagcccaaagagttcattcctcttgc 183 || ||||||||||||||||||||||||||||| || |||||||| ||||||| | ||| Sbjct: 152 tagcgaagaggaccagaggcttcctcatcaccgcgaacccaaagaattcattcatgttga 211 Query: 184 aaaactttcagaattaggtgttgtaagctggaacctaaatgctgataactgggagaaaga 243 || ||| ||||| |||| || | |||||| ||||||| |||||||||||||||| Sbjct: 212 taagcttacagaactaggagtaatcagctggcgcctaaatcctgataactgggagaattg 271 Query: 244 tgagaatctcaagaaaatccgtgaggccaggggatactcttatgtggacatttgcgatgt 303 ||||| || |||| |||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 272 cgagaacctgaagagaatccgcgaagccagaggttactcttatgtggacatttgtgatgt 331 Query: 304 atgtccggagaagttgccaaactacgaggccaagctgaagaatttctttgaagaacactt 363 || || |||||| ||||||| || || | ||| | |||| |||||||||||||||| | Sbjct: 332 gtgcccagagaagctgccaaattatgaaactaagatcaagagtttctttgaagaacacct 391 Query: 364 gcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgaggga 423 |||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| || Sbjct: 392 gcataccgatgaagaaatacgctattgtcttgaagggagtggatactttgatgtgagaga 451 Query: 424 ccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgcctgc 483 |||||| || |||||||| ||||||||| | |||||||| |||||||||||| ||||||| Sbjct: 452 ccaaaatgatcagtggattcgtatagcactgaagaaaggaggcatgattgttctgcctgc 511 Query: 484 aggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggctctt 543 ||| ||||| ||||||||||| ||||| | |||||||| |||||||||||||| || || Sbjct: 512 agggatgtaccaccgctttacgttggacaccgacaactatatcaaggcaatgcgactgtt 571 Query: 544 tgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagctagaaa 603 ||| || || || | ||||| || ||||| || |||||||||||||| || || ||||| Sbjct: 572 tgttggcgatcctgtttggacaccctacaaccgtccccatgaccatcttcctgcaagaaa 631 Query: 604 ggagt 608 ||||| Sbjct: 632 ggagt 636
>dbj|AK061653.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C08, full insert sequence Length = 612 Score = 398 bits (201), Expect = e-108 Identities = 258/277 (93%) Strand = Plus / Plus Query: 360 acttgcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtga 419 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | Sbjct: 1 acttgcatactgatgaagagatacgctattgtcttgagggaagtggatacttcgatgtca 60 Query: 420 gggaccaaaacgaacagtggatccgtatagcagttaagaaaggcggcatgattgttttgc 479 |||||||||| || |||||||||||| ||||||| |||||||| |||||||||||||||| Sbjct: 61 gggaccaaaatgatcagtggatccgtgtagcagtgaagaaagggggcatgattgttttgc 120 Query: 480 ctgcaggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatgcggc 539 |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 121 ctgcgggaatgtatcaccgcttcacattggacagtgacaactacatcaaggcaatgcggc 180 Query: 540 tctttgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctcccagcta 599 |||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||| Sbjct: 181 tctttgtgggagagcctgtctggacgccgtacaaccgtccccatgaccatctgccagcta 240 Query: 600 gaaaggagtatgtcgacaagattatcaacagaggtgg 636 |||||||||||||||| || ||||||||||| ||||| Sbjct: 241 gaaaggagtatgtcgaaaaaattatcaacaggggtgg 277
>ref|NM_196524.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein ID1 (OSJNBa0006I13.11), mRNA Length = 693 Score = 381 bits (192), Expect = e-102 Identities = 426/504 (84%) Strand = Plus / Plus Query: 105 aagcatggtacatggatgacagtgaagaggaccagaggcttcctcatcaccgtgagccca 164 ||||||||||||||||||| || ||||||||||||||||||||||||||||| || |||| Sbjct: 134 aagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaaccca 193 Query: 165 aagagttcattcctcttgcaaaactttcagaattaggtgttgtaagctggaacctaaatg 224 |||| ||||||| | ||| || ||| ||||| |||| || | |||||| ||||||| Sbjct: 194 aagaattcattcatgttgataagcttacagaactaggagtaatcagctggcgcctaaatc 253 Query: 225 ctgataactgggagaaagatgagaatctcaagaaaatccgtgaggccaggggatactctt 284 |||||||||||||||| ||||| || |||| |||||| || ||||| || ||||||| Sbjct: 254 ctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagaggttactctt 313 Query: 285 atgtggacatttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaaga 344 ||||||||||||| ||||| || || |||||| ||||||| || || | ||| | |||| Sbjct: 314 atgtggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaaga 373 Query: 345 atttctttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtg 404 |||||||||||||||| ||||||| |||||||| ||||||||||||||||| || |||| Sbjct: 374 gtttctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtg 433 Query: 405 gatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggcg 464 |||||||||||||||| |||||||| || |||||||| ||||||||| | |||||||| | Sbjct: 434 gatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaaggag 493 Query: 465 gcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactaca 524 ||||||||||| |||||||||| ||||| ||||||||||| ||||| | |||||||| | Sbjct: 494 gcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactata 553 Query: 525 tcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatg 584 ||||||||||||| || ||||| || || || | ||||| || ||||| || ||||||| Sbjct: 554 tcaaggcaatgcgactgtttgttggcgatcctgtttggacaccctacaaccgtccccatg 613 Query: 585 accatctcccagctagaaaggagt 608 ||||||| || || |||||||||| Sbjct: 614 accatcttcctgcaagaaaggagt 637
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 |||||||| ||||| ||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 3321679 ggatacttcgatgtcagggaccaaaatgatcagtggatccgtgtagcagtgaagaaaggg 3321738 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 3321739 ggcatgattgttttgcctgcgggaatgtatcaccgcttcacattggacagtgacaactac 3321798 Query: 524 atcaagg 530 ||||||| Sbjct: 3321799 atcaagg 3321805 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 81 aggatggcaaggagcaggtcatccaagcatggtacatggatgacagtgaagaggaccaga 140 |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 3321044 aggatggcaaggaggaggtcatcgaagcttggtacatggatgacagtgaagaggaccaga 3321103 Query: 141 ggcttcctcatcaccgtgagcccaaagagttcattcctcttgcaaaactttcag 194 ||||||||||||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 3321104 ggcttcctcatcatcgtgagcccaaagaattcattcctcttagcaaactttcag 3321157 Score = 153 bits (77), Expect = 8e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 293 atttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaatttcttt 352 ||||| ||||| ||||| || ||| |||||||||| ||||| |||||||| ||||||||| Sbjct: 3321449 atttgtgatgtgtgtccagaaaagctgccaaactatgaggctaagctgaaaaatttcttt 3321508 Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3321509 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggaagtgg 3321561 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 207 taagctggaacctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtg 266 |||||||| ||| ||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 3321290 taagctggcgcctgaatgctgatgactgggagaatgatgagaacctcaagaaaatccgtg 3321349 Query: 267 aggccaggggatactctta 285 ||||||||||||||||||| Sbjct: 3321350 aggccaggggatactctta 3321368 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 528 aggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgacc 587 |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 3322032 aggcaatgcggctctttgtgggagagcctgtctggacgccgtacaaccgtccccatgacc 3322091 Query: 588 atctcccagctag 600 |||| |||||||| Sbjct: 3322092 atctgccagctag 3322104 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 599 agaaaggagtatgtcgacaagattatcaacagaggtgg 636 ||||||||||||||||| || ||||||||||| ||||| Sbjct: 3322195 agaaaggagtatgtcgaaaaaattatcaacaggggtgg 3322232
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Minus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 |||||||| ||||| ||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 107535 ggatacttcgatgtcagggaccaaaatgatcagtggatccgtgtagcagtgaagaaaggg 107476 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 107475 ggcatgattgttttgcctgcgggaatgtatcaccgcttcacattggacagtgacaactac 107416 Query: 524 atcaagg 530 ||||||| Sbjct: 107415 atcaagg 107409 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Minus Query: 81 aggatggcaaggagcaggtcatccaagcatggtacatggatgacagtgaagaggaccaga 140 |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 108170 aggatggcaaggaggaggtcatcgaagcttggtacatggatgacagtgaagaggaccaga 108111 Query: 141 ggcttcctcatcaccgtgagcccaaagagttcattcctcttgcaaaactttcag 194 ||||||||||||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 108110 ggcttcctcatcatcgtgagcccaaagaattcattcctcttagcaaactttcag 108057 Score = 153 bits (77), Expect = 8e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 293 atttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaatttcttt 352 ||||| ||||| ||||| || ||| |||||||||| ||||| |||||||| ||||||||| Sbjct: 107765 atttgtgatgtgtgtccagaaaagctgccaaactatgaggctaagctgaaaaatttcttt 107706 Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107705 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggaagtgg 107653 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 207 taagctggaacctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtg 266 |||||||| ||| ||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 107924 taagctggcgcctgaatgctgatgactgggagaatgatgagaacctcaagaaaatccgtg 107865 Query: 267 aggccaggggatactctta 285 ||||||||||||||||||| Sbjct: 107864 aggccaggggatactctta 107846 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 528 aggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgacc 587 |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 107182 aggcaatgcggctctttgtgggagagcctgtctggacgccgtacaaccgtccccatgacc 107123 Query: 588 atctcccagctag 600 |||| |||||||| Sbjct: 107122 atctgccagctag 107110 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 599 agaaaggagtatgtcgacaagattatcaacagaggtgg 636 ||||||||||||||||| || ||||||||||| ||||| Sbjct: 107019 agaaaggagtatgtcgaaaaaattatcaacaggggtgg 106982
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 |||||||| ||||| ||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 3321790 ggatacttcgatgtcagggaccaaaatgatcagtggatccgtgtagcagtgaagaaaggg 3321849 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 3321850 ggcatgattgttttgcctgcgggaatgtatcaccgcttcacattggacagtgacaactac 3321909 Query: 524 atcaagg 530 ||||||| Sbjct: 3321910 atcaagg 3321916 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 81 aggatggcaaggagcaggtcatccaagcatggtacatggatgacagtgaagaggaccaga 140 |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 3321155 aggatggcaaggaggaggtcatcgaagcttggtacatggatgacagtgaagaggaccaga 3321214 Query: 141 ggcttcctcatcaccgtgagcccaaagagttcattcctcttgcaaaactttcag 194 ||||||||||||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 3321215 ggcttcctcatcatcgtgagcccaaagaattcattcctcttagcaaactttcag 3321268 Score = 153 bits (77), Expect = 8e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 293 atttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaatttcttt 352 ||||| ||||| ||||| || ||| |||||||||| ||||| |||||||| ||||||||| Sbjct: 3321560 atttgtgatgtgtgtccagaaaagctgccaaactatgaggctaagctgaaaaatttcttt 3321619 Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3321620 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggaagtgg 3321672 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 207 taagctggaacctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtg 266 |||||||| ||| ||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 3321401 taagctggcgcctgaatgctgatgactgggagaatgatgagaacctcaagaaaatccgtg 3321460 Query: 267 aggccaggggatactctta 285 ||||||||||||||||||| Sbjct: 3321461 aggccaggggatactctta 3321479 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 528 aggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgacc 587 |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 3322143 aggcaatgcggctctttgtgggagagcctgtctggacgccgtacaaccgtccccatgacc 3322202 Query: 588 atctcccagctag 600 |||| |||||||| Sbjct: 3322203 atctgccagctag 3322215 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 599 agaaaggagtatgtcgacaagattatcaacagaggtgg 636 ||||||||||||||||| || ||||||||||| ||||| Sbjct: 3322306 agaaaggagtatgtcgaaaaaattatcaacaggggtgg 3322343
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 133 bits (67), Expect = 8e-28 Identities = 112/127 (88%) Strand = Plus / Minus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 ||||||||||||||||| |||||||| || |||||||| ||||||||| | |||||||| Sbjct: 14238732 ggatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaagga 14238673 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||| |||||||||| ||||| ||||||||||| ||||| | |||||||| Sbjct: 14238672 ggcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactat 14238613 Query: 524 atcaagg 530 ||||||| Sbjct: 14238612 atcaagg 14238606 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 105 aagcatggtacatggatgacagtgaagaggaccagaggcttcctcatcaccgtgagccca 164 ||||||||||||||||||| || ||||||||||||||||||||||||||||| || |||| Sbjct: 14239371 aagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaaccca 14239312 Query: 165 aagagttcattc 176 |||| ||||||| Sbjct: 14239311 aagaattcattc 14239300 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 289 ggacatttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaattt 348 ||||||||| ||||| || || |||||| ||||||| || || | ||| | |||| ||| Sbjct: 14238957 ggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaagagttt 14238898 Query: 349 ctttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 14238897 ctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtgg 14238841 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 217 cctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtgaggccagggg 276 ||||||| |||||||||||||||| ||||| || |||| |||||| || ||||| || Sbjct: 14239148 cctaaatcctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagagg 14239089 Query: 277 atactcttatgtgg 290 ||||||||||||| Sbjct: 14239088 ttactcttatgtgg 14239075
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 133 bits (67), Expect = 8e-28 Identities = 112/127 (88%) Strand = Plus / Minus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 ||||||||||||||||| |||||||| || |||||||| ||||||||| | |||||||| Sbjct: 110805 ggatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaagga 110746 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||| |||||||||| ||||| ||||||||||| ||||| | |||||||| Sbjct: 110745 ggcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactat 110686 Query: 524 atcaagg 530 ||||||| Sbjct: 110685 atcaagg 110679 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 105 aagcatggtacatggatgacagtgaagaggaccagaggcttcctcatcaccgtgagccca 164 ||||||||||||||||||| || ||||||||||||||||||||||||||||| || |||| Sbjct: 111444 aagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaaccca 111385 Query: 165 aagagttcattc 176 |||| ||||||| Sbjct: 111384 aagaattcattc 111373 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 289 ggacatttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaattt 348 ||||||||| ||||| || || |||||| ||||||| || || | ||| | |||| ||| Sbjct: 111030 ggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaagagttt 110971 Query: 349 ctttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 110970 ctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtgg 110914 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 217 cctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtgaggccagggg 276 ||||||| |||||||||||||||| ||||| || |||| |||||| || ||||| || Sbjct: 111221 cctaaatcctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagagg 111162 Query: 277 atactcttatgtgg 290 ||||||||||||| Sbjct: 111161 ttactcttatgtgg 111148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 133 bits (67), Expect = 8e-28 Identities = 112/127 (88%) Strand = Plus / Minus Query: 404 ggatactttgatgtgagggaccaaaacgaacagtggatccgtatagcagttaagaaaggc 463 ||||||||||||||||| |||||||| || |||||||| ||||||||| | |||||||| Sbjct: 14246974 ggatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaagga 14246915 Query: 464 ggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgacaactac 523 |||||||||||| |||||||||| ||||| ||||||||||| ||||| | |||||||| Sbjct: 14246914 ggcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactat 14246855 Query: 524 atcaagg 530 ||||||| Sbjct: 14246854 atcaagg 14246848 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 105 aagcatggtacatggatgacagtgaagaggaccagaggcttcctcatcaccgtgagccca 164 ||||||||||||||||||| || ||||||||||||||||||||||||||||| || |||| Sbjct: 14247613 aagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaaccca 14247554 Query: 165 aagagttcattc 176 |||| ||||||| Sbjct: 14247553 aagaattcattc 14247542 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 289 ggacatttgcgatgtatgtccggagaagttgccaaactacgaggccaagctgaagaattt 348 ||||||||| ||||| || || |||||| ||||||| || || | ||| | |||| ||| Sbjct: 14247199 ggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaagagttt 14247140 Query: 349 ctttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtgg 405 ||||||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 14247139 ctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtgg 14247083 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 217 cctaaatgctgataactgggagaaagatgagaatctcaagaaaatccgtgaggccagggg 276 ||||||| |||||||||||||||| ||||| || |||| |||||| || ||||| || Sbjct: 14247390 cctaaatcctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagagg 14247331 Query: 277 atactcttatgtgg 290 ||||||||||||| Sbjct: 14247330 ttactcttatgtgg 14247317
>gb|BT020561.1| Arabidopsis thaliana At4g14710 gene, complete cds Length = 600 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 515 gacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaat 574 |||||||| ||||||||||||||||| || ||||| || || ||||||| || |||||| Sbjct: 451 gacaactatatcaaggcaatgcggcttttcgtgggtgaaccggtctggacaccatacaat 510 Query: 575 cgcccccatgaccatctcccagctagaaaggagta 609 ||||| || ||||| ||||| || || |||||||| Sbjct: 511 cgcccacacgaccacctccctgcaaggaaggagta 545 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatacttt 412 |||||||| ||||| |||||||||||||| || || || ||| || || || |||||| Sbjct: 289 gaagaacatttgcacactgatgaagagatccgttactgcgttgcaggaagcggttacttt 348 Query: 413 gatgtgaggga 423 ||||||||||| Sbjct: 349 gatgtgaggga 359
>gb|AY159561.1| Vitis vinifera submergence induced protein 2-like (SIP) mRNA, partial cds Length = 581 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagt 514 |||||||| || |||||||| || ||||| ||||| |||||||| || ||| ||||| Sbjct: 64 aagaaaggaggaatgattgtattacctgctggaatttatcaccggttcacactggattcg 123 Query: 515 gacaactacatcaaggcaatgcggctctttgt 546 |||||||||||||||||||| |||| ||||| Sbjct: 124 aacaactacatcaaggcaatgaggctgtttgt 155
>gb|AF462818.1|AF462818 Arabidopsis thaliana AT4g14710/dl3395c mRNA, complete cds Length = 840 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 515 gacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaat 574 |||||||| ||||||||||||||||| || ||||| || || ||||||| || |||||| Sbjct: 498 gacaactatatcaaggcaatgcggcttttcgtgggtgaaccggtctggacaccatacaat 557 Query: 575 cgcccccatgaccatctccc 594 ||||| || ||||| ||||| Sbjct: 558 cgcccacacgaccacctccc 577 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatacttt 412 |||||||| ||||| |||||||||||||| || || || ||| || || || |||||| Sbjct: 336 gaagaacatttgcacactgatgaagagatccgttactgcgttgcaggaagcggttacttt 395 Query: 413 gatgtgaggga 423 ||||||||||| Sbjct: 396 gatgtgaggga 406
>gb|AY086754.1| Arabidopsis thaliana clone 2738 mRNA, complete sequence Length = 991 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 515 gacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaat 574 |||||||| ||||||||||||||||| || ||||| || || ||||||| || |||||| Sbjct: 646 gacaactatatcaaggcaatgcggcttttcgtgggtgaaccggtctggacaccatacaat 705 Query: 575 cgcccccatgaccatctccc 594 ||||| || ||||| ||||| Sbjct: 706 cgcccacacgaccacctccc 725 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagat 381 |||||||| ||||| |||||||||||||| Sbjct: 484 gaagaacatttgcacactgatgaagagat 512
>ref|NM_128197.2| Arabidopsis thaliana metal ion binding AT2G26400 mRNA, complete cds Length = 811 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 350 tttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatac 409 ||||||||||| || |||| |||||||||||| || || || || | || ||||||||| Sbjct: 286 tttgaagaacatttacatattgatgaagagatccgttactgcctcgcaggaagtggatac 345 Query: 410 tttgatgtgaggga 423 |||||||||||||| Sbjct: 346 tttgatgtgaggga 359
>ref|NM_117556.3| Arabidopsis thaliana metal ion binding AT4G14716 mRNA, complete cds Length = 934 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 528 tgacaactatatcaaggcaatgcggctattcgtgggtgaaccggtatggacaccatacaa 587 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 588 tcgcccacacgaccatct 605 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 118 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 164
>gb|BT010499.1| Arabidopsis thaliana At2g26400 gene, complete cds Length = 600 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 350 tttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatac 409 ||||||||||| || |||| |||||||||||| || || || || | || ||||||||| Sbjct: 286 tttgaagaacatttacatattgatgaagagatccgttactgcctcgcaggaagtggatac 345 Query: 410 tttgatgtgaggga 423 |||||||||||||| Sbjct: 346 tttgatgtgaggga 359
>emb|BX828911.1|CNS0A3GD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 833 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 476 tgacaactatatcaaggcaatgcggctattcgtgggtgaaccggtatggacaccatacaa 535 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 536 tcgcccacacgaccatct 553
>gb|BT005440.1| Arabidopsis thaliana clone U50641 unknown protein (At4g14716) mRNA, complete cds Length = 610 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 450 tgacaactatatcaaggcaatgcggctattcgtgggtgaaccggtatggacaccatacaa 509 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 510 tcgcccacacgaccatct 527 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 40 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 86
>gb|BT004801.1| Arabidopsis thaliana At4g14716 gene, complete cds Length = 579 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 450 tgacaactatatcaaggcaatgcggctattcgtgggtgaaccggtatggacaccatacaa 509 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 510 tcgcccacacgaccatct 527 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 40 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 86
>gb|AY089014.1| Arabidopsis thaliana clone 16319 mRNA, complete sequence Length = 925 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 526 tgacaactatatcaaggcaatgcggcttttcgtgggtgaaccggtatggacaccatacaa 585 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 586 tcgcccacacgaccatct 603 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatacttt 412 |||||||| |||||||||||||||||||| || || || ||| || ||||| |||||| Sbjct: 367 gaagaacatttgcatactgatgaagagatccgttactgcgttgcaggaagtggttacttt 426 Query: 413 gatgtgag 420 |||||||| Sbjct: 427 gatgtgag 434 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 118 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 164
>dbj|AK176649.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-18-I07 Length = 901 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 350 tttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatac 409 ||||||||||| || |||| |||||||||||| || || || || | || ||||||||| Sbjct: 303 tttgaagaacatttacatattgatgaagagatccgttactgcctcgcaggaagtggatac 362 Query: 410 tttgatgtgaggga 423 |||||||||||||| Sbjct: 363 tttgatgtgaggga 376
>dbj|AK118285.1| Arabidopsis thaliana At4g14710 mRNA for unknown protein, complete cds, clone: RAFL19-57-K09 Length = 914 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaa 573 ||||||||| ||||||||||||||||| || ||||| || || | ||||| || ||||| Sbjct: 513 tgacaactatatcaaggcaatgcggctattcgtgggtgaaccggtatggacaccatacaa 572 Query: 574 tcgcccccatgaccatct 591 |||||| || |||||||| Sbjct: 573 tcgcccacacgaccatct 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 103 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 149
>gb|AY701395.1| Brassica juncea ARD/ARD family protein 1 mRNA, partial cds Length = 416 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 476 ttgcctgcaggaatgtatcaccgctttacattggatagtgacaactacatcaaggcaatg 535 |||||||| ||||| ||||| ||||| || ||||| ||||||||| |||||||||||| Sbjct: 6 ttgcctgctggaatctatcatcgcttcaccgtggattctgacaactatatcaaggcaatg 65 Query: 536 cggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgaccatctccca 595 || || || ||||| || || | ||||| || |||||||| || || |||||||| || Sbjct: 66 cgtcttttcgtgggtgaaccggtgtggacaccatacaatcgtccacacgaccatcttcct 125 Query: 596 gctagaaaggagtatgt 612 || || ||||| ||||| Sbjct: 126 gcaaggaaggaatatgt 142
>ref|NM_117554.2| Arabidopsis thaliana metal ion binding AT4G14710 transcript variant AT4G14710.1 mRNA, complete cds Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 515 gacaactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaat 574 |||||||| ||||||||||||||||| || || || || || ||||||| || |||||| Sbjct: 646 gacaactatatcaaggcaatgcggcttttcgttggtgaaccggtctggacaccatacaat 705 Query: 575 cgcccccatgaccatctccc 594 ||||| || ||||| ||||| Sbjct: 706 cgcccacacgaccacctccc 725 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatacttt 412 |||||||| ||||| |||||||||||||| || || || ||| || || || |||||| Sbjct: 484 gaagaacatttgcacactgatgaagagatccgttactgcgttgcaggaagcggttacttt 543 Query: 413 gatgtgaggga 423 ||||||||||| Sbjct: 544 gatgtgaggga 554
>emb|BX826617.1|CNS0A43P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB48ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 514 tgacaactacatcaaggcaatgcggctctttgtggg 549 ||||||||| |||||||||||||||||||| ||||| Sbjct: 462 tgacaactatatcaaggcaatgcggctcttcgtggg 497
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 189511 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 189465 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 353 gaagaacacttgcatactgatgaagagat 381 |||||||| ||||| |||||||||||||| Sbjct: 183481 gaagaacatttgcacactgatgaagagat 183453 Score = 40.1 bits (20), Expect = 8.8 Identities = 53/64 (82%) Strand = Plus / Minus Query: 528 aggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgacc 587 ||||||||||||| || ||||| || || | ||||| || ||||||||||| || |||| Sbjct: 188712 aggcaatgcggctattcgtgggtgaaccggtatggacaccatacaatcgcccacacgacc 188653 Query: 588 atct 591 |||| Sbjct: 188652 atct 188649
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 104 caagcatggtacatggatgacagtgaagaggaccagaggcttcctca 150 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 135007 caagcttggtatatggatgatagtgaagaggatcagagacttcctca 134961 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 353 gaagaacacttgcatactgatgaagagat 381 |||||||| ||||| |||||||||||||| Sbjct: 128977 gaagaacatttgcacactgatgaagagat 128949 Score = 40.1 bits (20), Expect = 8.8 Identities = 53/64 (82%) Strand = Plus / Minus Query: 528 aggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcccccatgacc 587 ||||||||||||| || ||||| || || | ||||| || ||||||||||| || |||| Sbjct: 134208 aggcaatgcggctattcgtgggtgaaccggtatggacaccatacaatcgcccacacgacc 134149 Query: 588 atct 591 |||| Sbjct: 134148 atct 134145
>gb|BT012079.1| Arabidopsis thaliana At2g26400 mRNA sequence Length = 597 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 350 tttgaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatac 409 ||||||||||| || |||| |||||||||||| || || | || | || ||||||||| Sbjct: 283 tttgaagaacatttacatattgatgaagagatccgttaccgcctcgcaggaagtggatac 342 Query: 410 tttgatgtgaggga 423 |||||||||||||| Sbjct: 343 tttgatgtgaggga 356
>gb|AY941749.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7234b allele, partial cds Length = 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttctttgaagaacacctgcacactgatgaggagat 51
>gb|AY941748.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7234a allele, partial cds Length = 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttctttgaagaacacctgcacactgatgaggagat 51
>gb|AY941747.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7233b allele, partial cds Length = 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttctttgaagaacacctgcacactgatgaggagat 51
>gb|AY941745.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7232b allele, partial cds Length = 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttctttgaagaacacctgcacactgatgaggagat 51
>gb|AY941744.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7232a allele, partial cds Length = 771 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttctttgaagaacacctgcacactgatgaggagat 51 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AC096777.1| Mus musculus clone RP23-106L19, complete sequence Length = 209671 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 5 aggaaggaaggaaagcagaggagag 29 ||||||||||||||||||||||||| Sbjct: 65322 aggaaggaaggaaagcagaggagag 65346
>gb|AF414129.1| Musa acuminata submergence induced protein-like protein mRNA, partial cds Length = 532 Score = 48.1 bits (24), Expect = 0.036 Identities = 108/136 (79%) Strand = Plus / Plus Query: 459 aaggcggcatgattgttttgcctgcaggaatgtatcaccgctttacattggatagtgaca 518 |||| |||||||| || || ||||| ||||| ||||| || || ||| | |||| ||| Sbjct: 11 aaggaggcatgatcgtcttacctgctggaatctatcatcgtttcacacttgatacgaaca 70 Query: 519 actacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgcc 578 |||| || ||||| |||||||||||||| || ||||| | ||||| || || || || | Sbjct: 71 actatattaaggcgatgcggctctttgtcggtgagccagtttggacaccctataaccgtc 130 Query: 579 cccatgaccatctccc 594 ||||||| |||||||| Sbjct: 131 cccatgatcatctccc 146
>ref|NM_001036563.1| Arabidopsis thaliana metal ion binding AT4G14710 transcript variant AT4G14710.2 mRNA, complete cds Length = 1015 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 353 gaagaacacttgcatactgatgaagagatacgctattgtcttgagggcagtggatacttt 412 |||||||| ||||| |||||||||||||| || || || ||| || || || |||||| Sbjct: 484 gaagaacatttgcacactgatgaagagatccgttactgcgttgcaggaagcggttacttt 543 Query: 413 gatgtgaggga 423 ||||||||||| Sbjct: 544 gatgtgaggga 554
>gb|DQ103496.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7277b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103495.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7277a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103494.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7276b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103493.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7276a allele, partial cds Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 196 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 242
>gb|DQ103492.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7275b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103491.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7275a allele, partial cds Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 196 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 242
>gb|DQ103490.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7274b allele, partial cds Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 196 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 242
>gb|DQ103489.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7274a allele, partial cds Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 196 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 242
>gb|DQ103488.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7272b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103487.1| Lycopersicon pimpinellifolium putative submergence induced protein 2-like (CT198) gene, CT198-7272a allele, partial cds Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 196 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 242
>gb|DQ103486.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7206b allele, partial cds Length = 772 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 204 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 250
>gb|DQ103485.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7206a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103484.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7205b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103483.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7205a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103482.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7204b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103481.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7204a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103480.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7203b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103479.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7203a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103478.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7201b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103477.1| Lycopersicon chmielewskii putative submergence induced protein 2-like (CT198) gene, CT198-7201a allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|DQ103476.1| Solanum ochranthum putative submergence induced protein 2-like (CT198) gene, partial cds Length = 773 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 341 aagaatttctttgaagaacacttgcatactgatgaagagat 381 ||||| || |||||||||||| |||| |||||||| ||||| Sbjct: 11 aagaacttttttgaagaacacctgcacactgatgaggagat 51
>gb|DQ460142.1| Nicotiana tabacum cDNA-AFLP fragment N_BC3M43-261 sequence Length = 161 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 467 atgattgttttgcctgcaggaatgtatcaccgctt 501 ||||||||| ||||||| | ||||||||||||||| Sbjct: 87 atgattgttctgcctgctgcaatgtatcaccgctt 121
>gb|AY941769.1| Solanum habrochaites putative submerged induced protein 2 (CT198) gene, CT198-7219b allele, partial cds Length = 764 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 204 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 250
>gb|AY941768.1| Solanum habrochaites putative submerged induced protein 2 (CT198) gene, CT198-7219a allele, partial cds Length = 764 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 204 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 250
>gb|AY941767.1| Solanum habrochaites putative submerged induced protein 2 (CT198) gene, CT198-7216b allele, partial cds Length = 764 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AY941753.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7236b allele, partial cds Length = 771 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AY941752.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7236a allele, partial cds Length = 762 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AY941750.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7235a allele, partial cds Length = 774 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AY941746.1| Lycopersicon peruvianum putative submerged induced protein 2 (CT198) gene, CT198-7233a allele, partial cds Length = 762 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 455 aagaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 |||||||| || ||||||||| | ||||| ||||| ||||||||||| Sbjct: 203 aagaaaggtggaatgattgttcttcctgctggaatctatcaccgctt 249
>gb|AC020593.6| Homo sapiens BAC clone RP11-317G22 from 4, complete sequence Length = 184206 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 4 gaggaaggaaggaaagcagaggagaga 30 |||||||||||||||| |||||||||| Sbjct: 62842 gaggaaggaaggaaaggagaggagaga 62816
>gb|AY701394.1| Brassica juncea ARD/ARD family protein 2 mRNA, partial cds Length = 401 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Plus Query: 518 aactacatcaaggcaatgcggctctttgtgggagagcccatctggacgccgtacaatcgc 577 ||||| |||||||||||||| || || ||||| || || | |||||||| |||||||| Sbjct: 48 aactatatcaaggcaatgcgtcttttcgtgggtgaaccggtgtggacgccatacaatcgt 107 Query: 578 ccccatgaccatctcccagctagaaaggagtatgt 612 || || |||||||| || || || ||||| ||||| Sbjct: 108 ccacacgaccatcttcctgcaaggaaggaatatgt 142
>ref|XM_471999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 383 cgctattgtcttgagggcagtggatactttgatgtgag 420 |||||||||||||| || ||||| ||||| |||||||| Sbjct: 523 cgctattgtcttgatggtagtggttacttcgatgtgag 560
>gb|DQ460140.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M43-164 sequence Length = 133 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Plus Query: 456 agaaaggcggcatgattgttttgcctgcaggaatgtatcaccgctt 501 ||||||| || ||||||||| ||||||| || || ||||||||||| Sbjct: 47 agaaaggtggaatgattgttctgcctgctgggatttatcaccgctt 92
>gb|AC118546.80| Mus musculus strain C57BL/6J clone rp23-346h22 map 17, complete sequence Length = 223070 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 73999 agaggaaggaaggaaagcagag 73978
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 ggcatgattgttttgcctgcaggaat 489 ||||||||||||||||||||| |||| Sbjct: 149354 ggcatgattgttttgcctgcatgaat 149379
>ref|XM_965184.1| PREDICTED: Tribolium castaneum similar to 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Aci-reductone dioxygenase) (ARD) (Androgen-responsive ARD-like protein 1) (LOC658827), mRNA Length = 801 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 337 gctgaagaatttctttgaagaacacttgcatactgatgaaga 378 |||||| || |||||| ||||||||||||| || |||||||| Sbjct: 489 gctgaaaaaattctttcaagaacacttgcacacagatgaaga 530
>gb|AC147798.30| Mus musculus strain C57BL/6J chromosome 17 clone rp24-129d12, complete sequence Length = 168127 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 167012 agaggaaggaaggaaagcagag 167033
>gb|AC147797.35| Mus musculus strain C57BL/6J clone rp23-223d3, complete sequence Length = 179282 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 84618 agaggaaggaaggaaagcagag 84597
>gb|AC093862.3| Homo sapiens BAC clone RP11-549C16 from 4, complete sequence Length = 172195 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 338 ctgaagaatttctttgaagaac 359 |||||||||||||||||||||| Sbjct: 155287 ctgaagaatttctttgaagaac 155266
>gb|AC166099.2| Mus musculus BAC clone RP24-254H22 from chromosome 17, complete sequence Length = 164625 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 71641 agaggaaggaaggaaagcagag 71620
>gb|AC173344.2| Mus musculus BAC clone RP23-222L16 from chromosome 17, complete sequence Length = 191106 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 96407 agaggaaggaaggaaagcagag 96386
>gb|AC166360.4| Mus musculus BAC clone RP24-497L5 from chromosome 17, complete sequence Length = 201109 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 48428 agaggaaggaaggaaagcagag 48407
>gb|AC166110.3| Mus musculus BAC clone RP23-130A4 from chromosome 17, complete sequence Length = 209815 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 agaggaaggaaggaaagcagag 24 |||||||||||||||||||||| Sbjct: 160984 agaggaaggaaggaaagcagag 161005
>emb|AL928700.7| Mouse DNA sequence from clone RP23-388J20 on chromosome 2, complete sequence Length = 158364 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 ggagaggaaggaaggaaagcagagga 26 ||||||||||||||||||| |||||| Sbjct: 46099 ggagaggaaggaaggaaaggagagga 46074
>ref|XM_630082.1| Dictyostelium discoideum ARD/ARD' family protein (DDB0230998), partial mRNA Length = 444 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 tttctttgaagaacacttgcatactgatgaaga 378 |||||||||||||||||| ||| ||||||||| Sbjct: 207 tttctttgaagaacacttacatgatgatgaaga 239
>gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete sequence Length = 132557 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 49458 ctgaagaatttctttgaagaa 49478
>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence Length = 191336 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 86815 ctgaagaatttctttgaagaa 86835
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 gcatgattgttttgcctgcag 485 ||||||||||||||||||||| Sbjct: 166957 gcatgattgttttgcctgcag 166937
>gb|AC127344.3| Mus musculus BAC clone RP23-212H18 from chromosome 7, complete sequence Length = 182487 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggcaaggagcaggtcatccaa 106 ||||||||||||||||||||| Sbjct: 138073 ggcaaggagcaggtcatccaa 138053
>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence Length = 214318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggcaaggagcaggtcatccaa 106 ||||||||||||||||||||| Sbjct: 7931 ggcaaggagcaggtcatccaa 7911
>gb|AC122365.4| Mus musculus BAC clone RP23-447A7 from chromosome 5, complete sequence Length = 195492 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 gttttgcctgcaggaatgtat 493 ||||||||||||||||||||| Sbjct: 60174 gttttgcctgcaggaatgtat 60154
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence Length = 215769 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 gttttgcctgcaggaatgtat 493 ||||||||||||||||||||| Sbjct: 12812 gttttgcctgcaggaatgtat 12792
>gb|AC109603.8| Mus musculus strain 129/Sv clone ct7-534h6 map 5, complete sequence Length = 81390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 gttttgcctgcaggaatgtat 493 ||||||||||||||||||||| Sbjct: 65989 gttttgcctgcaggaatgtat 66009
>emb|AL157762.13| Human DNA sequence from clone RP11-153I24 on chromosome 13q33.1-34 Contains the LIG4 gene for ligase IV, DNA, ATP-dependent, a novel gene (FLJ14906), the TNFSF13B gene for tumor necrosis factor (ligand) superfamily, member 13b and a CpG island, complete sequence Length = 185229 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 154179 ctgaagaatttctttgaagaa 154159
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence Length = 242759 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gagaggaaggaaggaaagcag 22 ||||||||||||||||||||| Sbjct: 114250 gagaggaaggaaggaaagcag 114230
>gb|AC153135.5| Mus musculus BAC clone RP24-181M6 from chromosome 13, complete sequence Length = 164002 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 gttttgcctgcaggaatgtat 493 ||||||||||||||||||||| Sbjct: 75515 gttttgcctgcaggaatgtat 75535
>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence Length = 223640 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gagaggaaggaaggaaagcag 22 ||||||||||||||||||||| Sbjct: 23947 gagaggaaggaaggaaagcag 23967
>gb|AC023678.4| Drosophila melanogaster 3L BAC RP98-14K14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186990 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 151132 gatgagaatctcaagaaaatc 151112
>gb|AC093437.2| Drosophila melanogaster 3L BAC RP98-5P17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 197878 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 68187 gatgagaatctcaagaaaatc 68207
>gb|AC078862.14| Homo sapiens 12 BAC RP11-139B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57000 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagaggagagag 31 ||||||||||||||||| |||||| |||| Sbjct: 47898 agaggaaggaaggaaagaagaggacagag 47870
>ref|NM_140284.1| Drosophila melanogaster CG6793-RA (CG6793), mRNA Length = 1695 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 1624 gatgagaatctcaagaaaatc 1644
>gb|AC010863.10| Homo sapiens chromosome 10 clone RP11-346E7, complete sequence Length = 186902 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggagaggaaggaaggaaagca 21 ||||||||||||||||||||| Sbjct: 91310 ggagaggaaggaaggaaagca 91290
>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence Length = 185819 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggagaggaaggaaggaaagca 21 ||||||||||||||||||||| Sbjct: 177529 ggagaggaaggaaggaaagca 177549
>gb|BT022798.1| Drosophila melanogaster IP13650 full insert cDNA Length = 1776 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 1619 gatgagaatctcaagaaaatc 1639
>gb|BT022774.1| Drosophila melanogaster IP13950 full insert cDNA Length = 1937 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 1802 gatgagaatctcaagaaaatc 1822
>gb|BT022766.1| Drosophila melanogaster IP13850 full insert cDNA Length = 1777 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 1613 gatgagaatctcaagaaaatc 1633
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccgccatggagaacgag 76 ||||||||||||||||||||| Sbjct: 25252059 gccgccgccatggagaacgag 25252039
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgaggggccgccgccatggag 70 ||||||||||||||||||||| Sbjct: 10507875 cgaggggccgccgccatggag 10507855
>gb|AC096652.1| Homo sapiens BAC clone RP11-16N2 from 4, complete sequence Length = 93274 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 91055 ctgaagaatttctttgaagaa 91035
>gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complete sequence Length = 194553 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 122695 ctgaagaatttctttgaagaa 122715
>gb|AC146071.3| Pan troglodytes BAC clone RP43-64L21 from chromosome 7, complete sequence Length = 207055 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctgaagaatttctttgaagaa 358 ||||||||||||||||||||| Sbjct: 121506 ctgaagaatttctttgaagaa 121526
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgaggggccgccgccatggag 70 ||||||||||||||||||||| Sbjct: 75480 cgaggggccgccgccatggag 75460
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgaggggccgccgccatggag 70 ||||||||||||||||||||| Sbjct: 108254 cgaggggccgccgccatggag 108234
>emb|BX004770.12| Zebrafish DNA sequence from clone DKEY-14K21 in linkage group 10, complete sequence Length = 231131 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gagaggaaggaaggaaagcag 22 ||||||||||||||||||||| Sbjct: 89965 gagaggaaggaaggaaagcag 89945
>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence Length = 167116 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggagag 29 ||||||||||||||| ||||||||| Sbjct: 18335 aggaaggaaggaaagaagaggagag 18311
>gb|AE003542.3| Drosophila melanogaster chromosome 3L, section 43 of 83 of the complete sequence Length = 303022 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gatgagaatctcaagaaaatc 262 ||||||||||||||||||||| Sbjct: 35980 gatgagaatctcaagaaaatc 36000
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccgccatggagaacgag 76 ||||||||||||||||||||| Sbjct: 25180235 gccgccgccatggagaacgag 25180215
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgccatggagaacgag 76 ||||||||||||||||||||| Sbjct: 85131 gccgccgccatggagaacgag 85151
>emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chromosome 2, complete sequence Length = 167210 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 attatcaacagaggtgggagc 640 ||||||||||||||||||||| Sbjct: 100880 attatcaacagaggtgggagc 100860
>gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosome 14, complete sequence Length = 161815 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggagag 29 ||||||||||||||| ||||||||| Sbjct: 138109 aggaaggaaggaaagaagaggagag 138085
>gb|AY331382.1| Brassica juncea ARD-like protein (ARD1) mRNA, complete cds Length = 899 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 363 tgcatactgatgaagagatacgctattgtcttgagggcagtggatactttgatgtgaggg 422 |||| |||||||||||||| || || || ||| || ||||| |||||||||||||||| Sbjct: 340 tgcacactgatgaagagatccgttactgcgttgcaggaagtggctactttgatgtgaggg 399 Query: 423 a 423 | Sbjct: 400 a 400 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 tggtacatggatgacagtgaagaggaccagaggcttcctca 150 |||||||||||||| || ||||||| ||||| |||||||| Sbjct: 87 tggtacatggatgatagccaagaggatcagagacttcctca 127
>emb|AL672098.13| Mouse DNA sequence from clone RP23-322M6 on chromosome X, complete sequence Length = 191655 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggagag 29 ||||||||||||||| ||||||||| Sbjct: 86831 aggaaggaaggaaagaagaggagag 86807
>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence Length = 169326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 gcatgattgttttgcctgcag 485 ||||||||||||||||||||| Sbjct: 107436 gcatgattgttttgcctgcag 107456
>gb|BC047772.2| Homo sapiens tuberous sclerosis 1, transcript variant 2, mRNA (cDNA clone IMAGE:5785462), complete cds Length = 1702 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 1277 gaaagcagaggagagagcag 1258
>gb|AC116375.11| Mus musculus chromosome 5, clone RP24-197K18, complete sequence Length = 150306 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagag 24 |||||||||||||||||||| Sbjct: 36872 aggaaggaaggaaagcagag 36853
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 464 ggcatgattgttttgcctgcaggaatgt 491 |||||||||||||| |||||||| |||| Sbjct: 194394 ggcatgattgttttacctgcaggtatgt 194367
>gb|AC114619.9| Mus musculus chromosome 5, clone RP24-86I23, complete sequence Length = 204468 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 133468 agcagaggagagagcagttg 133449
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aggaaagcagaggagagagc 32 |||||||||||||||||||| Sbjct: 137037 aggaaagcagaggagagagc 137018
>gb|BC026571.1| Mus musculus sorting nexin 17, mRNA (cDNA clone MGC:36375 IMAGE:4986268), complete cds Length = 1995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 317 agcagaggagagagcagttg 336
>gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A) gene, complete cds Length = 170869 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aaggaaagcagaggagagag 31 |||||||||||||||||||| Sbjct: 161759 aaggaaagcagaggagagag 161740
>ref|NM_153680.1| Mus musculus sorting nexin 17 (Snx17), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 317 agcagaggagagagcagttg 336
>gb|AC109202.14| Mus musculus chromosome 15, clone RP23-11B7, complete sequence Length = 236690 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ttgttttgcctgcaggaatg 490 |||||||||||||||||||| Sbjct: 171617 ttgttttgcctgcaggaatg 171636
>gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, complete sequence Length = 199065 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 464 ggcatgattgttttgcctgcaggaatgt 491 |||||||||||||| |||||||| |||| Sbjct: 194476 ggcatgattgttttacctgcaggtatgt 194503
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tgggagaaagatgagaatct 252 |||||||||||||||||||| Sbjct: 49724 tgggagaaagatgagaatct 49743
>ref|XM_538259.1| PREDICTED: Canis familiaris similar to Monocarboxylate transporter 2 (MCT 2) (LOC481138), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gaatttctttgaagaacact 362 |||||||||||||||||||| Sbjct: 139 gaatttctttgaagaacact 120
>gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, complete sequence Length = 114070 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gcatgattgttttgcctgca 484 |||||||||||||||||||| Sbjct: 9420 gcatgattgttttgcctgca 9401
>gb|AC118543.30| Mus musculus strain C57BL/6J clone rp23-254b17 map 17, complete sequence Length = 241570 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggagagagc 32 ||||||||||||| |||||| ||||||| Sbjct: 14191 aggaaggaaggaaggcagagaagagagc 14164
>emb|AL589990.9| Human DNA sequence from clone RP11-109M16 on chromosome 1, complete sequence Length = 53890 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aaggaaagcagaggagagag 31 |||||||||||||||||||| Sbjct: 45092 aaggaaagcagaggagagag 45073
>emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chromosome X Contains gene FLJ30058, the 5' end of a novel gene and four CpG islands, complete sequence Length = 146343 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gaaggaaagcagaggagaga 30 |||||||||||||||||||| Sbjct: 68916 gaaggaaagcagaggagaga 68897
>emb|AL590725.5| Human DNA sequence from clone RP11-107L15 on chromosome 6 Contains the gene for G protein-coupled receptor slt (melanin-concentrating hormone 2) (SLT), the 3' end of a novel gene and a CpG island, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ataactgggagaaagatgag 247 |||||||||||||||||||| Sbjct: 151276 ataactgggagaaagatgag 151257
>gb|AC175711.3| Pan troglodytes BAC clone CH251-100H6 from chromosome unknown, complete sequence Length = 169508 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagagga 26 ||||||||||||||||| |||||| Sbjct: 150375 agaggaaggaaggaaaggagagga 150352
>emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chromosome 10 Contains a serine/threonine protein kinase pseudogene, complete sequence Length = 200891 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gataactgggagaaagatga 246 |||||||||||||||||||| Sbjct: 99827 gataactgggagaaagatga 99846
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 155261 gaaagcagaggagagagcag 155280
>emb|AL356752.13| Human DNA sequence from clone RP11-73M11 on chromosome 13 Contains part of the ATP11A gene for ATPase Class VI type 11A (ATPIH ATPIS KIAA1021), a novel gene and four CpG islands, complete sequence Length = 143517 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 agaggaaggaaggaaagcagagga 26 ||||||||||||||||| |||||| Sbjct: 102506 agaggaaggaaggaaaggagagga 102483
>emb|AL160400.20| Human DNA sequence from clone RP11-367G6 on chromosome 6 Contains a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and an argininosuccinate synthetase (ASS) (ASS1,CTLN1) pseudogene, complete sequence Length = 58408 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggagaggaaggaaggaaagcagag 24 ||||||||||||||||||| |||| Sbjct: 35 ggagaggaaggaaggaaagaagag 58
>emb|AL078584.17|HSJ245M18 Human DNA sequence from clone RP1-245M18 on chromosome 6p21.32-22.3 Contains the 5' end of the gene for chromosome 6 open reading frame 32 (PL48, DIFF40, DIFF48, KIAA0386), a cytochrome c oxidase polypeptide II pseudogene and a CpG island, complete sequence Length = 104770 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggagaggaaggaaggaaagcagag 24 ||||||||||||||||||| |||| Sbjct: 65 ggagaggaaggaaggaaagaagag 42
>gb|AC157934.3| Mus musculus chromosome 5, clone RP24-224K15, complete sequence Length = 160733 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagag 24 |||||||||||||||||||| Sbjct: 107456 aggaaggaaggaaagcagag 107437
>emb|AL049698.3|HSJ470B24 Human DNA sequence from clone RP3-470B24 on chromosome 6q26-27 Contains the 3' end of a novel gene and the 3' end of the MLLT4 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) translocated gene protein 4 (AF-6), complete sequence Length = 87780 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggaga 28 ||||| |||||||||||||||||| Sbjct: 12892 aggaaagaaggaaagcagaggaga 12869
>gb|BC070032.1| Homo sapiens tuberous sclerosis 1, transcript variant 2, mRNA (cDNA clone IMAGE:5273541), complete cds Length = 1751 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 1305 gaaagcagaggagagagcag 1286
>emb|CR622174.1| full-length cDNA clone CS0DD001YO24 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1490 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 1246 gaaagcagaggagagagcag 1227
>gb|AC007295.8| Arabidopsis thaliana chromosome 2 clone T4E5 map PR1, complete sequence Length = 62915 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 agatgagaatctcaagaaaa 260 |||||||||||||||||||| Sbjct: 51403 agatgagaatctcaagaaaa 51384
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 350 tttgaagaacacttgcatactgatgaagagat 381 ||||||||||| || |||| |||||||||||| Sbjct: 18346 tttgaagaacatttacatattgatgaagagat 18315 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ggatactttgatgtgaggga 423 |||||||||||||||||||| Sbjct: 18205 ggatactttgatgtgaggga 18186
>dbj|AK156299.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830015I05 product:sorting nexin 17, full insert sequence Length = 1991 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 368 agcagaggagagagcagttg 387
>gb|AC161617.4| Pan troglodytes BAC clone CH251-548L6 from chromosome unknown, complete sequence Length = 218767 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 agaggaaggaaggaaagcagagga 26 ||||||||||||||||| |||||| Sbjct: 46453 agaggaaggaaggaaaggagagga 46476
>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence Length = 199337 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aggaaagcagaggagagagc 32 |||||||||||||||||||| Sbjct: 1054 aggaaagcagaggagagagc 1073
>dbj|AK077780.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830447M19 product:SORTING NEXIN 17 homolog [Homo sapiens], full insert sequence Length = 1752 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 319 agcagaggagagagcagttg 338
>dbj|AK077650.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730503I07 product:SORTING NEXIN 17 homolog [Homo sapiens], full insert sequence Length = 1942 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 319 agcagaggagagagcagttg 338
>gb|AC120377.25| Mus musculus chromosome 3, clone RP24-262L5, complete sequence Length = 158004 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggagaggaaggaaggaaagcagag 24 ||||||||||||||||||| |||| Sbjct: 59572 ggagaggaaggaaggaaaggagag 59549
>dbj|AK047265.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930044C17 product:similar to SORTING NEXIN 17 [Homo sapiens], full insert sequence Length = 2334 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 317 agcagaggagagagcagttg 336
>gb|AC101862.13| Mus musculus chromosome 1, clone RP23-318D9, complete sequence Length = 155322 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aggaaggaaggaaagcagaggaga 28 ||||||||||||| |||||||||| Sbjct: 33559 aggaaggaaggaaggcagaggaga 33582
>gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complete sequence Length = 183515 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gagaggaaggaaggaaagcagagg 25 |||||||||||||||||| ||||| Sbjct: 144211 gagaggaaggaaggaaaggagagg 144234
>emb|BX682533.6| Mouse DNA sequence from clone RP23-108L1 on chromosome 4, complete sequence Length = 160792 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 467 atgattgttttgcctgcaggaatgtatc 494 |||| ||||||||||||| ||||||||| Sbjct: 7476 atgagtgttttgcctgcatgaatgtatc 7449
>gb|AC022236.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-425I8, complete sequence Length = 198392 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gcatgattgttttgcctgca 484 |||||||||||||||||||| Sbjct: 105290 gcatgattgttttgcctgca 105309
>dbj|AK207583.1| Mus musculus cDNA, clone:Y2G0108H12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031029, based on BLAT search Length = 147 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 57 agcagaggagagagcagttg 76
>dbj|AK190219.1| Mus musculus cDNA, clone:Y1G0102B16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031029, based on BLAT search Length = 147 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 57 agcagaggagagagcagttg 76
>gb|BC023732.1| Mus musculus sorting nexin 17, mRNA (cDNA clone MGC:36623 IMAGE:5352355), complete cds Length = 1985 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 333 agcagaggagagagcagttg 352
>gb|AC107808.20| Mus musculus chromosome 9, clone RP23-61B14, complete sequence Length = 188589 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 ctcccagctagaaaggagta 609 |||||||||||||||||||| Sbjct: 64805 ctcccagctagaaaggagta 64786
>dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-673F18, complete sequence Length = 186084 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 225 ctgataactgggagaaagatgagaatct 252 |||| |||||||||||| |||||||||| Sbjct: 117668 ctgagaactgggagaaaaatgagaatct 117641
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete sequence Length = 223662 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gagttccaggatggcaagga 93 |||||||||||||||||||| Sbjct: 24268 gagttccaggatggcaagga 24287
>ref|NM_001008567.1| Homo sapiens tuberous sclerosis 1 (TSC1), transcript variant 2, mRNA Length = 1729 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 1304 gaaagcagaggagagagcag 1285
>gb|AC005284.1|AC005284 Homo sapiens chromosome 17, clone hRPK.795_F_17, complete sequence Length = 192802 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aaggaaagcagaggagagag 31 |||||||||||||||||||| Sbjct: 123072 aaggaaagcagaggagagag 123091
>gb|BC029675.1| Mus musculus cDNA clone IMAGE:5373594, containing frame-shift errors Length = 1939 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcagaggagagagcagttg 37 |||||||||||||||||||| Sbjct: 304 agcagaggagagagcagttg 323
>gb|AC002096.1|AC002096 Homo sapiens chromosome 9q34, clone 63G10, complete sequence Length = 39805 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaagcagaggagagagcag 34 |||||||||||||||||||| Sbjct: 38044 gaaagcagaggagagagcag 38063
>emb|AL844510.10| Mouse DNA sequence from clone RP23-54C21 on chromosome 2, complete sequence Length = 121507 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggaaggaaggaaagcagagg 25 |||||||||||||||||||| Sbjct: 4180 ggaaggaaggaaagcagagg 4161
>gb|AC158530.2| Mus musculus BAC clone RP23-255H12 from chromosome 17, complete sequence Length = 154287 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 5 aggaaggaaggaaagcagaggagagagc 32 ||||||||||||| |||||| ||||||| Sbjct: 46526 aggaaggaaggaaggcagagaagagagc 46499
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete sequence Length = 187541 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aggaaggaaggaaagcagag 24 |||||||||||||||||||| Sbjct: 132093 aggaaggaaggaaagcagag 132112
>dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, complete sequence Length = 331211 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aggaaggaaggaaagcagaggaga 28 ||||| |||||||||||||||||| Sbjct: 270534 aggaaagaaggaaagcagaggaga 270557
>dbj|AB011399.1| Homo sapiens gene for AF-6, complete cds Length = 163974 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aggaaggaaggaaagcagaggaga 28 ||||| |||||||||||||||||| Sbjct: 140105 aggaaagaaggaaagcagaggaga 140128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,702,080 Number of Sequences: 3902068 Number of extensions: 6702080 Number of successful extensions: 187842 Number of sequences better than 10.0: 181 Number of HSP's better than 10.0 without gapping: 181 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 187035 Number of HSP's gapped (non-prelim): 784 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
