ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal4a18 |
|---|---|
| Clone Library Name | barley_pub |
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 38.9 bits (89), Expect = 0.010 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 2/163 (1%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAG--APQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 +S SSS S + P A + AG AP + +SSS S S FS + Sbjct: 1183 SSSSSSSDSSKSPHKHGGAKRQHAGHGAPHLGPQSHSSSSSSSSSSSSSSASKSFSTVKP 1242 Query: 206 QFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCLEDLPKK 385 PAR S D SS + S S S+S + E ++D+ + Sbjct: 1243 PMTRKPRPARSSSSSSSSDSSSSSSSSSSSSSSSSSSSSSSSESKSL--EWLAVKDVNQS 1300 Query: 386 RPYNKKMKPCRSHVEIDGDQRACPAPGSNNSSKGVAKQTSGSS 514 YN K P R + +R PA S++SS + +S SS Sbjct: 1301 AFYNFKYVPQR---KPQTSRRHTPASSSSSSSSSSSSSSSSSS 1340
>OCLN_CANFA (Q28269) Occludin| Length = 521 Score = 35.8 bits (81), Expect = 0.087 Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 22/151 (14%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SSS P P+ GR+ +P++ ++D +ET + +S DE E+ ++ Sbjct: 368 SSSGHLEPPSKRAPSKGRTG---RPKRLEQDHYETDYTTGGESCDEL-----EEDWIREY 419 Query: 224 PPA---------RRLVSEGVYDLSSMKAELSVKKGGLSKY-------------YDGKSQS 337 PP +R G+ + S++AEL LS+ Y + Sbjct: 420 PPITSDQQRQLYKRNFDTGLQEYKSLQAELDEINKELSRLDKELDDYREESEEYMAAADE 479 Query: 338 FACMSEVRCLEDLPKKRPYNKKMKPCRSHVE 430 + + +V+ D KR Y K++K SH++ Sbjct: 480 YNRLKQVKGSPDYKNKRNYCKQLKSKLSHIK 510
>OCLN_PONPY (Q5RFS5) Occludin| Length = 522 Score = 35.0 bits (79), Expect = 0.15 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 12/137 (8%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SSS ++ P PA GR+A + + Q+ + T+ SCD +E D ++ P + Sbjct: 369 SSSGNFETPSKRAPAKGRAAKSKRTEQDHYETDYTTGGESCDELEE----DWIREYPPIT 424 Query: 224 PPARRLVSEGVYD------------LSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCL 367 +R + + +D L + ELS L Y + + A E L Sbjct: 425 SDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRL 484 Query: 368 EDLPKKRPYNKKMKPCR 418 + + Y K C+ Sbjct: 485 KQVKGSADYKSKKNHCK 501
>CAR11_HUMAN (Q9BXL7) Caspase recruitment domain-containing protein 11| (CARD-containing MAGUK protein 3) (Carma 1) Length = 1147 Score = 34.7 bits (78), Expect = 0.19 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Frame = +2 Query: 8 NSKXKEYITSIDSSSLSYRKPRNLQPAM-GRSAGAPQPRQEDEDLFETSSSFSCDSDDEA 184 N + K S DS++L PRNL + + G PR ++ ++S+S D + Sbjct: 423 NLESKLRRLSKDSNNLDQSLPRNLPVTIISQDFGDASPRTNGQEADDSSTSEESPEDSK- 481 Query: 185 RFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKK 298 F+P PP RR+ +G+ L K+ +S+K+ Sbjct: 482 -------YFLPYHPPQRRMNLKGI-QLQRAKSPISLKR 511
>PERC_AEDAE (P82600) Chorion peroxidase precursor (EC 1.11.1.7) [Contains:| Chorion peroxidase light chain; Chorion peroxidase heavy chain] Length = 791 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/71 (26%), Positives = 34/71 (47%) Frame = +2 Query: 320 DGKSQSFACMSEVRCLEDLPKKRPYNKKMKPCRSHVEIDGDQRACPAPGSNNSSKGVAKQ 499 D Q+ CM+ + C+ D KK +KPC + +DG CP+ N +S V + Sbjct: 51 DACEQNEVCMAPIECILDAKKK----AILKPCSTVPSVDG--ICCPSSEHNGTSSRVQQS 104 Query: 500 TSGSSCANLMM 532 + + +L++ Sbjct: 105 SEEHAADHLVL 115
>VE2_RHPV1 (P22156) Regulatory protein E2| Length = 366 Score = 33.1 bits (74), Expect = 0.56 Identities = 20/68 (29%), Positives = 27/68 (39%) Frame = +2 Query: 149 SSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGK 328 SS+ CD G P+ PPA E V+ + + S G + DGK Sbjct: 207 SSATHCDKLPTVEIVSGLQHINPSPPPANPSAKENVWSSPAKRVRRSDSGGDPVRALDGK 266 Query: 329 SQSFACMS 352 S+S C S Sbjct: 267 SRSVLCGS 274
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 32.3 bits (72), Expect = 0.96 Identities = 43/193 (22%), Positives = 69/193 (35%), Gaps = 10/193 (5%) Frame = +2 Query: 5 SNSKXKEYITSIDSSSLSYRKPRNL--QPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDD 178 S+S + +S+ SS S + Q A S + Q + SSS S S Sbjct: 98 SSSSVSDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSS 157 Query: 179 EARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSEV 358 + S Q ++ VS+ S + + +S S SQS + S+V Sbjct: 158 ASDVSSSVSQSASSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDV 217 Query: 359 -----RCLEDLPKKRPYNKKMKPCRSHVEIDGDQRACPAPGSNNS---SKGVAKQTSGSS 514 + + S V G Q A GS++S S A SGS+ Sbjct: 218 SSSVSQSASSTSDVSSSVSQSASSTSGVSSSGSQSVSSASGSSSSFPQSTSSASTASGSA 277 Query: 515 CANLMMARSGSSS 553 +N + + + S+S Sbjct: 278 TSNSLSSITSSAS 290
>OCLN_HUMAN (Q16625) Occludin| Length = 522 Score = 32.0 bits (71), Expect = 1.3 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 12/137 (8%) Frame = +2 Query: 44 SSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPAS 223 SS ++ P PA GR+ + + Q+ + T+ SCD +E D ++ P + Sbjct: 369 SSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEE----DWIREYPPIT 424 Query: 224 PPARRLVSEGVYD------------LSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCL 367 +R + + +D L + ELS L Y + + A E L Sbjct: 425 SDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRL 484 Query: 368 EDLPKKRPYNKKMKPCR 418 + + Y K C+ Sbjct: 485 KQVKGSADYKSKKNHCK 501
>VE1_HPV09 (Q05111) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 605 Score = 32.0 bits (71), Expect = 1.3 Identities = 21/89 (23%), Positives = 42/89 (47%) Frame = +2 Query: 77 LQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGV 256 L P + + +PQ + + LFE S C ++ S+ + + VPA+PP ++G+ Sbjct: 92 LSPQLESISLSPQHKPKRR-LFEQDSGLECSVNEAEDLSETQVEEVPANPPTTAQGTKGL 150 Query: 257 YDLSSMKAELSVKKGGLSKYYDGKSQSFA 343 + + +VK ++K+ + FA Sbjct: 151 GIVKDLLKHSNVKAVLMAKFKEAFGVGFA 179
>HTF4_MOUSE (Q61286) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Class A helix-loop-helix transcription factor ME1) Length = 706 Score = 31.2 bits (69), Expect = 2.1 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P N + + +G+ P +++DE+L E SS Sbjct: 501 NGNHSVLSSTVAASNTELNHKTPENFRGGVQNQSGSVVPTEIKTENKEKDENLHEPPSSD 560 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 561 DMKSDDESSQKD 572
>ENO_MYCGE (P47647) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 458 Score = 31.2 bits (69), Expect = 2.1 Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%) Frame = +2 Query: 293 KKGGLSKYYDGKSQSFACMSEVRCLEDLPKKRPY---------------NKKMKPCRSHV 427 KKG + + K S + LE L KK P N+ K SH+ Sbjct: 273 KKGIKANILNAKDWSLTSKEMIAYLEKLTKKYPIISIEDGLSENDWEGMNQLTKTIGSHI 332 Query: 428 EIDGDQRACPAPGSNNSSKGVAKQTSGSSCANLMMARSGSSSM 556 +I GD C + + KGVA+ T+ S L S S ++ Sbjct: 333 QIVGDDTYC--TNAELAKKGVAQNTTNSILIKLNQIGSISETI 373
>IKBB_HUMAN (Q15653) NF-kappa-B inhibitor beta (NF-kappa-BIB) (I-kappa-B-beta)| (IkappaBbeta) (IKB-beta) (IKB-B) (Thyroid receptor-interacting protein 9) (TR-interacting protein 9) Length = 356 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRL 241 +P + + R+ GAP+P EDE SSS DS DE + +D V +S RL Sbjct: 284 RPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEG--DEYDDIVVHSSRSQTRL 340
>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB) Length = 853 Score = 30.8 bits (68), Expect = 2.8 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = +2 Query: 38 IDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVP 217 +D S + + R+L+ SAG P P SS + D D+ + G Q Sbjct: 133 VDESPVEFPATRSLRRRATASAGTPWPS-------PPSSYLTIDLTDDTEDTHGTPQ--S 183 Query: 218 ASPPARRLVSEGVY-DLSSMKAELSVKKGGLSKYYDGK 328 +S P RL + + S + E G S+Y DGK Sbjct: 184 SSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGK 221
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Frame = +2 Query: 5 SNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSA--------GAPQPRQEDEDLFETSSSF 160 S+++ + ITS + + +P + G S+ G+ P+ D+D TS S Sbjct: 656 SDTEDTDRITSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSI 715 Query: 161 SCDSDDEA-RFSDGEDQFVPASPPA 232 D+E+ S + Q + A PPA Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPA 740
>PEA3_BRARE (Q9PUQ1) ETS domain-containing transcription factor PEA3| Length = 494 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 107 APQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVP 217 A P QE EDLF+ S EA+ D ++QFVP Sbjct: 41 AELPPQESEDLFQDLSQLQETWLTEAQVPDSDEQFVP 77
>IKBB_MOUSE (Q60778) NF-kappa-B inhibitor beta (NF-kappa-BIB) (I-kappa-B-beta)| (IkappaBbeta) (IKB-beta) (IKB-B) Length = 359 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEAR 187 +P + + R+ GAP+P ED+ L SSS S DSD + R Sbjct: 284 RPNPILARLLRAHGAPEPEDEDDKLSPCSSSGS-DSDSDNR 323
>CELR1_MOUSE (O35161) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| Length = 3034 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +2 Query: 68 PRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPA 232 PRN + A G + + DE +SS + DS+D+ + ED++ PA PA Sbjct: 2809 PRNSKKAHGPDSDSDSELSLDEHSSSYASSHTSDSEDDG--GEAEDKWNPAGGPA 2861
>P66A_MOUSE (Q8CHY6) Transcriptional repressor p66 alpha (GATA zinc finger| domain-containing protein 2A) Length = 629 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = +2 Query: 350 SEVRCLE-DLPKKRPYNKKMKPCR--SHVEIDGDQRACPAPGSNNSSKGVAKQT 502 S+ R LE DL + NKKMK + S + +DGD R P P S S++G+ + T Sbjct: 10 SQKRTLEPDLTEDDVENKKMKMEKGSSELTVDGDSRVMPEP-SAGSAQGLLRTT 62
>ENO_STAAW (P64079) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAU (O69174) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) (Laminin-binding protein) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSQRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAS (Q6GB54) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAR (Q6GIL4) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAN (P99088) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAM (P64078) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>ENO_STAAC (Q5HHP1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/89 (25%), Positives = 35/89 (39%) Frame = +2 Query: 32 TSIDSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQF 211 T I + S R L+ A+G G + ED ET + + A + GE+ F Sbjct: 185 TEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTEDAVETI----IQAIEAAGYKPGEEVF 240 Query: 212 VPASPPARRLVSEGVYDLSSMKAELSVKK 298 + + GVYD S + E K+ Sbjct: 241 LGFDCASSEFYENGVYDYSKFEGEHGAKR 269
>HTF4_MESAU (Q60420) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Beta-cell E-box transcriptional activator 1) (BETA1) (Fragment) Length = 437 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P N + + +G P +++DE+L E SS Sbjct: 232 NGNHSVLSSTVAASNTDLNHKTPENYRGGLQNQSGNVVPTEIKTENKEKDENLHEPPSSD 291 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 292 DMKSDDESSQKD 303
>ENO_STAES (Q8CPY3) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = +2 Query: 71 RNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSE 250 R L+ A+G G + ED ET + ++A + GED F+ + Sbjct: 198 RGLETAVGDEGGFAPRFEGTEDAVETIIK----AIEKAGYKPGEDVFLGFDCASSEFYEN 253 Query: 251 GVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 254 GVYDYTKFEGEHGAKR 269
>ENO_STAEQ (Q5HQV0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = +2 Query: 71 RNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSE 250 R L+ A+G G + ED ET + ++A + GED F+ + Sbjct: 198 RGLETAVGDEGGFAPRFEGTEDAVETIIK----AIEKAGYKPGEDVFLGFDCASSEFYEN 253 Query: 251 GVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 254 GVYDYTKFEGEHGAKR 269
>HPS4_HUMAN (Q9NQG7) Hermansky-Pudlak syndrome 4 protein (Light-ear protein| homolog) Length = 708 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = +2 Query: 254 VYDLSSMKAELSVKKGGLSKYYDGKS----QSFAC---MSEVRCLEDLPKKRPYNKKMKP 412 +YD S +K E + G+ +Y ++ Q C VRC+ D+ P +++ Sbjct: 20 LYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLVRLRK 79 Query: 413 CRSHVEIDGD 442 + +++DGD Sbjct: 80 LKFAIKVDGD 89
>WRIP1_RAT (Q8CG07) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +2 Query: 47 SSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 SS RK +PA +AG+ PR DE + D D +A DGED Sbjct: 131 SSSPARKGLGKRPAAAAAAGSASPRSWDETEAQEEEEAGVDGDGDADV-DGED 182
>WRIP1_MOUSE (Q91XU0) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +2 Query: 47 SSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGED 205 SS RK +PA +AG+ PR DE + D D +A DGED Sbjct: 131 SSSPARKGMGKRPAAAAAAGSASPRSWDEAEAQEEEEAGVDGDGDADV-DGED 182
>COA2_POVBK (P03094) Coat protein VP2 [Contains: Coat protein VP3]| Length = 350 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 541 TPRHHQVRAGAPGGLLGDSLAAVVRTRRGAGSLVTVDLDVAPAW 410 TP+ + V AGAPG + G AA+++T G SL V W Sbjct: 63 TPQTYAVIAGAPGAIAG--FAALIQTVSGISSLAQVGYRFFSDW 104
>COA2_POVBA (P14997) Coat protein VP2 [Contains: Coat protein VP3]| Length = 350 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 541 TPRHHQVRAGAPGGLLGDSLAAVVRTRRGAGSLVTVDLDVAPAW 410 TP+ + V AGAPG + G AA+++T G SL V W Sbjct: 63 TPQTYAVIAGAPGAIAG--FAALIQTVTGISSLAQVGYRFFSDW 104
>CAPP_VIBF1 (Q5E2E3) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 876 Score = 29.6 bits (65), Expect = 6.2 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 644 PEPKQEWRDLMEVLSEVSCEA--YRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRN 701 Query: 290 VKKG 301 G Sbjct: 702 PNGG 705
>PRM2_PIG (P19757) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 92 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 183 HGSRTARTSSCRPPRRRAGWFQRASTICRR*RQSSPSRK 299 H S T R SCR RRRA +R CRR R+ R+ Sbjct: 52 HRSHTRRRRSCRRRRRRACRHRRHRRGCRRIRRRRRCRR 90
>HTF4_RAT (P51514) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (Salivary-specific cAMP response element-binding protein alpha) (SCBP alpha) (DNA-binding protein HTF4) Length = 707 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = +2 Query: 2 NSNSKXKEYITSIDSSSLSYRKPRNLQPAMGRSAGAPQP-------RQEDEDLFETSSSF 160 N N + ++ L+++ P + + + +G+ P +++DE+L E SS Sbjct: 502 NGNHSVLSSTVAASNTELNHKTPESFRGGVQNQSGSVVPTEIKTENKEKDENLHEPPSSD 561 Query: 161 SCDSDDEARFSD 196 SDDE+ D Sbjct: 562 DMKSDDESSQKD 573
>SPL3_ARATH (P93015) Squamosa promoter-binding-like protein 3| Length = 131 Score = 29.3 bits (64), Expect = 8.1 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Frame = +2 Query: 305 LSKYYDGKSQSFACMSEVR-CLEDLPKKRPYNKKMKPCR-----SHVEIDG-DQRAC 454 L K GK+ S + + +V C D+ K + Y+K+ K C+ HV I G QR C Sbjct: 39 LEKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFC 95
>COAT_CERV (P05399) Probable coat protein| Length = 494 Score = 29.3 bits (64), Expect = 8.1 Identities = 31/124 (25%), Positives = 51/124 (41%) Frame = +2 Query: 41 DSSSLSYRKPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPA 220 D S Y+ P+N P++ + A P ++ S F ++ +S G Sbjct: 272 DYESNLYKLPQNEYPSLVKQYLAKIPIVGEK----ASKRFEEEASAATSYSLGF------ 321 Query: 221 SPPARRLVSEGVYDLSSMKAELSVKKGGLSKYYDGKSQSFACMSEVRCLEDLPKKRPYNK 400 A +LV+E + + ELS K+ L ++ +F E C KK+ Y+K Sbjct: 322 ---AHKLVNEELAKI----CELSKKQKKLKRFNKNCCSTFEKPYEYGCKPSYSKKKKYSK 374 Query: 401 KMKP 412 K KP Sbjct: 375 KYKP 378
>SUHW4_HUMAN (Q6N043) Suppressor of hairy wing homolog 4| Length = 979 Score = 29.3 bits (64), Expect = 8.1 Identities = 37/120 (30%), Positives = 46/120 (38%), Gaps = 8/120 (6%) Frame = +2 Query: 179 EARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELSVKKG-GLSKYYDGKSQSFACMSE 355 E+R SD P S P S V S + + + GLS Y G + S A MSE Sbjct: 111 ESRSSDSSVIVQPFSKPGYITNSSRVVSNKSSELLFDLTQDTGLSHYQGGPTLSMAGMSE 170 Query: 356 VRCLEDLPKKRPYN----KKMKPCRSHVEIDGDQRACP---APGSNNSSKGVAKQTSGSS 514 L P N KK KP S V P +P +S +AK T+ SS Sbjct: 171 SSFLSKRPSTSEVNNVNPKKPKPSES-VSGANSSAVLPSVKSPSVTSSQAMLAKGTNTSS 229
>CAPP_VIBVY (Q7MH68) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 29.3 bits (64), Expect = 8.1 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 645 PEPKQEWRDLMEVLSQVSCEA--YRSVVRGEPDFVPYFRQATPELELGKLPLGSRPAKRN 702 Query: 290 VKKG 301 G Sbjct: 703 PNGG 706
>CAPP_VIBVU (Q8DCN2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 29.3 bits (64), Expect = 8.1 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +2 Query: 110 PQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLVSEGVYDLSSMKAELS 289 P+P+QE DL E S SC++ GE FVP A + G L S A+ + Sbjct: 645 PEPKQEWRDLMEVLSQVSCEA--YRSVVRGEPDFVPYFRQATPELELGKLPLGSRPAKRN 702 Query: 290 VKKG 301 G Sbjct: 703 PNGG 706
>ENO_STRMU (Q8DTS9) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 432 Score = 29.3 bits (64), Expect = 8.1 Identities = 20/78 (25%), Positives = 31/78 (39%) Frame = +2 Query: 65 KPRNLQPAMGRSAGAPQPRQEDEDLFETSSSFSCDSDDEARFSDGEDQFVPASPPARRLV 244 K R L+ A+G G ED ET + + A + GE+ F+ + Sbjct: 194 KERGLETAVGDEGGFAPKFDGTEDAVETIIK----AIETAGYKPGEEVFLGFDCASSEFY 249 Query: 245 SEGVYDLSSMKAELSVKK 298 GVYD + + E K+ Sbjct: 250 DNGVYDYTKFEGEKGAKR 267 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,688,823 Number of Sequences: 219361 Number of extensions: 1109191 Number of successful extensions: 4738 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4721 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
