>ZN511_HUMAN (Q8NB15) Zinc finger protein 511|
          Length = 262

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 57/153 (37%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
 Frame = +2

Query: 173 PNPAEAMEVSAPPE-GEAPKDAGPWLGFWEVSRR-RLTPDDPFFAAGDMERELLAKHVAL 346
           P  AE + V   P  G AP        F  V+R  R   +  FF  GD++R L  + V +
Sbjct: 15  PGAAEPLPVERDPAAGAAP--------FRFVARPVRFPREHQFFEDGDVQRHLYLQDVIM 66

Query: 347 DLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTS 526
            ++D         +   V    C +AGC    D L+D+E HY T H   CS C R +P+ 
Sbjct: 67  QVADVP-------EKPRVPAFACQVAGCCQVFDALDDYEHHYHTLHGNVCSFCKRAFPSG 119

Query: 527 RLLSIHISEAHDSFFQAKVARGFPMYECLVEGC 625
            LL  HI E HDS FQ    R   MY+CLVEGC
Sbjct: 120 HLLDAHILEWHDSLFQILSERQ-DMYQCLVEGC 151

>L2K1_DROME (Q9V574) Protein lethal(2)k10201 (Wunen region protein B)|
          Length = 221

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 464 DHYSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVARG-FPMYECLVEGC 625
           D+     + SC  C ++ PT+ LL +HI+E HD +F A V RG  PM+ C +E C
Sbjct: 66  DNIDKEQSYSCVECRKMLPTAHLLDLHITEQHDCYFAASVERGDKPMFSCFLEEC 120

>TF3A_SCHPO (Q9UTL5) Transcription factor IIIA (Factor A) (TFIIIA)|
          Length = 374

 Score = 37.0 bits (84), Expect = 0.050
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
 Frame = +2

Query: 413 CPIAGCGAH--LDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVA 586
           CP   C  H   +     ++H    H  SCS+C R + T+  L  H+     +  + K  
Sbjct: 177 CPHESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKT- 235

Query: 587 RGFPMYECLVEGC 625
                Y C +EGC
Sbjct: 236 -----YHCPMEGC 243

>YQ23_CAEEL (Q09452) Putative zinc finger protein C09F5.3|
          Length = 359

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +2

Query: 413 CPIAGCGAHLDCLEDFEDHYSTRHTAS------CSVCSRVYPTSRLLSIHISEAHDSF 568
           CPI   G      +   +H +T+H         CS+C   +P+ +  S+H +EAH  +
Sbjct: 152 CPICPVGTPFRDKKSQLEHLTTQHLQIQVTQHICSICDSAFPSPQAQSVHFAEAHKKY 209

>P43_XENBO (P25066) P43 5S RNA-binding protein (42S P43) (Thesaurin-B)|
          Length = 365

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
 Frame = +2

Query: 413 CPIAGCGAHLDCLEDFEDHYSTRH----TASCSV--CSRVYPTSRLLSIHISEAHDSFFQ 574
           CP AGC       +    H   +H       CSV  C R +   R L IH+SE  +    
Sbjct: 77  CPTAGCKMTFSTKKSLSRHKLYKHGDAVPLKCSVPGCKRSFRKKRALRIHVSEHSNE--- 133

Query: 575 AKVARGFPMYECLVEGCG 628
                  P+  C V GCG
Sbjct: 134 -------PLSVCDVPGCG 144

>ZXDB_HUMAN (P98169) Zinc finger X-linked protein ZXDB|
          Length = 803

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = +2

Query: 413 CPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKV 583
           CP  GCG     + + + H   +   ++  C VC   +PT   LS H      S F+ + 
Sbjct: 336 CPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLSAH----QRSHFEPE- 390

Query: 584 ARGFPMYECLVEGC 625
                 Y+C   GC
Sbjct: 391 ----RPYQCAFSGC 400

>TF3A_YEAST (P39933) Transcription factor IIIA (TFIIIA)|
          Length = 429

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
 Frame = +2

Query: 365 RYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYST--RHTASCSVCSRVYPTSRLLS 538
           R QL++ +V    +  CP  GC            H  +   H  +C  C++ +     L 
Sbjct: 120 RQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLR 179

Query: 539 IHISEAHDSFFQAKVARGFPMYECLVEGC 625
            HIS+ HD   +         Y+C   GC
Sbjct: 180 NHISKHHDPEVENP-------YQCTFAGC 201

>ZXDA_HUMAN (P98168) Zinc finger X-linked protein ZXDA|
          Length = 799

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = +2

Query: 413 CPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKV 583
           CP  GCG     + + + H   +   ++  C VC   +PT   L  H      S F+ + 
Sbjct: 332 CPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLGAH----QRSHFEPE- 386

Query: 584 ARGFPMYECLVEGC 625
                 Y+C   GC
Sbjct: 387 ----RPYQCAFSGC 396

>GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135|
          Length = 494

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 179 PAEAMEVSAPPEGEAPKDA-GPWLGFWEVSR 268
           PA  +++  PP G AP  A GPW GF   SR
Sbjct: 158 PAAFLDLFTPPGGSAPAAAAGPWRGFCAASR 188

>ZN692_MOUSE (Q3U381) Zinc finger protein 692|
          Length = 531

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +2

Query: 410 CCPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIH 544
           CCP   CG   +  +  ++H   +S      C  C+R + TS  L IH
Sbjct: 359 CCPEPACGKSFNFKKHLKEHVKLHSDTRDYICEFCARSFRTSSNLVIH 406

>ZO84_XENLA (P18753) Oocyte zinc finger protein XLCOF8.4 (Fragment)|
          Length = 780

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +2

Query: 428 CGAHLDCLEDFEDHYSTRHTA----SCSVCSRVYPTSRLLSIH 544
           CG       DF  H  T HT     SCS C R +PTS +L+ H
Sbjct: 679 CGKCFTRSSDFNVHRRT-HTGEKPYSCSECGRCFPTSSVLTSH 720

>LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell lineage protein|
            13)
          Length = 2248

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 17/105 (16%)
 Frame = +2

Query: 362  DRYQLEKMDVASVSTVCCPIAGC--------GAHLDCLEDFEDHYSTRHTASCSVCSRVY 517
            D+     +D       CCPI G           H DCL+     +   + +SC  C + +
Sbjct: 2050 DQEHASFLDSNGTDASCCPICGSLSMWSLPKDPHTDCLQSHIIRHGLDYRSSCRQCLKQF 2109

Query: 518  PT--------SRLLSIHISEAHDSFFQAKV-ARGFPMYECLVEGC 625
            P         + +L  H    H + F   +   G    E   E C
Sbjct: 2110 PADVNQDQVIAHILDTHGMSMHGNTFHCNLCTTGTKTVEEFAEHC 2154



 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 443 DCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIH 544
           + +E +  H+   H   C +C RVYP+   L+ H
Sbjct: 344 ETIEHYLGHHDVVHLFGCDICYRVYPSRYELTKH 377

>NIN_MOUSE (Q61043) Ninein|
          Length = 2035

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = +2

Query: 311  MERELLAKHVALDLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHTA 490
            M++    KH   DL D +   L     +SV    C      A LDC  + E+   TR T 
Sbjct: 1122 MKQGPATKHFLSDLGDHEARDLASTGTSSVQRQECKTEASEASLDCFSELENSEDTR-TE 1180

Query: 491  SCSVCSRVYPTSRLLSI 541
            S  + S++      L++
Sbjct: 1181 SWDLKSQISQLREQLTV 1197

>KRUH_DROME (P08155) Krueppel homologous protein 1|
          Length = 845

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +2

Query: 413 CPIAGCGAHLDCLEDFEDHYSTRHTAS----CSVCSRVYPTSRLLSIH 544
           CP  GCG    C +  + H S  HT      C +C R +  + +L +H
Sbjct: 385 CPEPGCGKGFTCSKQLKVH-SRTHTGEKPYHCDICFRDFGYNHVLKLH 431

>CD59B_MOUSE (P58019) CD59B glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 129

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 350 LSD-DDRYQLEKMDVASVSTVCCPIAGCGAHLDCLED 457
           LSD +  Y + ++DVA + + CC    C  +LD LE+
Sbjct: 65  LSDCNSNYIMSRLDVAGIQSKCCQWGLCNKNLDGLEE 101

>YPT9_CAEEL (P41886) Hypothetical protein F37A4.9|
          Length = 418

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
 Frame = +2

Query: 398 VSTVCCPIAGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQ- 574
           + T+ C +   G     +      Y   H+AS +  S   P ++ L I  S AHD+F + 
Sbjct: 166 ILTIGCELTIFGECTTQISSLFKPYQRTHSASSTSRSLSSPNTKCLKIDESSAHDAFTEF 225

Query: 575 ------------AKVARGFPMYECLV 616
                       A   R FP + C++
Sbjct: 226 LSTGEFSDFIIVASCGREFPTHMCIL 251

>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
 Frame = +2

Query: 308 DMERELLAKHVALDLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHT 487
           +++RE + +    D  DDD +  E +DV     +    +          D ED  + +  
Sbjct: 143 EIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSS----------DGEDRPTKKRV 192

Query: 488 AS-CSVCSRVYPTSRLLSIHISEAH 559
              C+ C +VY +   L  HISE H
Sbjct: 193 KQECTTCGKVYNSWYQLQKHISEEH 217

>HAM_DROME (Q8I7Z8) Transcription factor hamlet|
          Length = 990

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 494 CSVCSRVYPTSRLLSIHISEAHDSFFQAKVARGFPMYECLVEGC 625
           C VC +VYP   LL  H+  AH  F Q +    FP  +C +  C
Sbjct: 223 CEVCDKVYPDLDLLDDHLIGAH-HFKQDE----FPCKQCALRFC 261

>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +2

Query: 179 PAEAMEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD-----DPFFAAG 307
           PA +   SAPP G  P+  GP  G   V  R  TP       PF A+G
Sbjct: 15  PASSPFASAPPPGIPPQSGGPPTGSEAVGFRPFTPSASQPTRPFTASG 62

>RECR_CHLMU (Q9PKF4) Recombination protein recR|
          Length = 200

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
 Frame = +2

Query: 329 AKHVALDLSDDDRYQLEKMDVA----SVSTVCCPIAGCGAHLDCLEDFEDHYSTRHTASC 496
           A+ +A +L + D  Q+E M +A    S S   CP   C               T  T+SC
Sbjct: 26  AEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFC-------------LKTSKTSSC 72

Query: 497 SVCSRVYPTSRLLSIHISEAHDSFFQAKVARG 592
             CS    +S L  +   +   SF ++K+ +G
Sbjct: 73  DFCSESRDSSFLCIVATPKDVFSFEKSKIFKG 104

>PSAE_SPIOL (P12354) Photosystem I reaction center subunit IV, chloroplast|
           precursor (PSI-E)
          Length = 125

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +2

Query: 182 AEAMEVSAPPEGEAPKDAG--PWLGFWEVSRRRLTPDDPFFAAGDMERELLAKHVALDLS 355
           A A   +A PEGEAPK A   P +G    S+ R+   + ++  G      +   VA+D  
Sbjct: 39  AAAAPAAASPEGEAPKAAAKPPPIGPKRGSKVRIMRKESYWYKG------VGSVVAVDQD 92

Query: 356 DDDRY----QLEKMDVASVST 406
              RY    +  K++ A+VST
Sbjct: 93  PKTRYPVVVRFNKVNYANVST 113

>PRDM5_MOUSE (Q9CXE0) PR domain zinc finger protein 5 (PR domain-containing|
           protein 5)
          Length = 599

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/69 (27%), Positives = 27/69 (39%)
 Frame = +2

Query: 422 AGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVARGFPM 601
           AG   HL C EDF          +C  C   +P+  +L+ H+   H          G   
Sbjct: 155 AGSKGHLGCEEDF----------ACPQCESSFPSEEVLTEHLQSLHQK------PTGEKE 198

Query: 602 YECLVEGCG 628
           ++C  E CG
Sbjct: 199 FKC--ENCG 205

>ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4|
           (Ethylene-responsive element-binding factor 4) (Related
           to APETALA-2 protein 5) (EREBP-4) (AtERF4)
          Length = 222

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 43  PTILPSSNQRFPTSLARCPSERRTTEARLP 132
           PT L  S+Q+ PT  AR PS+  T +   P
Sbjct: 81  PTFLELSDQKVPTGFARSPSQSSTLDCASP 110

>NCAP_VSVSJ (P03521) Nucleocapsid protein (Nucleoprotein)|
          Length = 422

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 191 MEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD 286
           +  +APP+G   +D   WLG++E   R+ TPD
Sbjct: 364 LTTNAPPQG---RDVVEWLGWFEDQNRKPTPD 392

>NCAP_VSVIG (P11212) Nucleocapsid protein (Nucleoprotein)|
          Length = 422

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 191 MEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD 286
           +  +APP+G   +D   WLG++E   R+ TPD
Sbjct: 364 LTTNAPPQG---RDVVEWLGWFEDQNRKPTPD 392


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,265,903
Number of Sequences: 219361
Number of extensions: 1468474
Number of successful extensions: 4829
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4819
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)