>gb|AY105784.1| Zea mays PCO113764 mRNA sequence
          Length = 588

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 239 gcttcggacttcatcaagcgtaagcacatgtcttgggcactccagaagagcacaaccatg 298
           |||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||
Sbjct: 271 gcttcggacttcatcaagctgaagcacaaggcttgggcactccagaagagcacaaccatg 330

             
Query: 299 ta 300
           ||
Sbjct: 331 ta 332

>ref|NM_189452.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 240

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 224 gatgtggattcggtggcttcggacttcatcaagcgtaagcacatgtcttgggcactccag 283
           ||||| ||||| || ||||| |||||||||||||  ||||||| | |||||||||| |||
Sbjct: 151 gatgtagattcagtagcttcagacttcatcaagctcaagcacagggcttgggcactgcag 210

                                         
Query: 284 aagagcacaaccatgtatccatcttcttaa 313
           |||||| ||| |||||||| | ||||||||
Sbjct: 211 aagagcgcaagcatgtatcaaccttcttaa 240

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                            
Query: 224      gatgtggattcggtggcttcggacttcatcaagcgtaagcacatgtcttgggcactccag 283
                ||||| ||||| || ||||| |||||||||||||  ||||||| | |||||||||| |||
Sbjct: 42831542 gatgtagattcagtagcttcagacttcatcaagctcaagcacagggcttgggcactgcag 42831601

                                              
Query: 284      aagagcacaaccatgtatccatcttcttaa 313
                |||||| ||| |||||||| | ||||||||
Sbjct: 42831602 aagagcgcaagcatgtatcaaccttcttaa 42831631

>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                         
Query: 224   gatgtggattcggtggcttcggacttcatcaagcgtaagcacatgtcttgggcactccag 283
             ||||| ||||| || ||||| |||||||||||||  ||||||| | |||||||||| |||
Sbjct: 25276 gatgtagattcagtagcttcagacttcatcaagctcaagcacagggcttgggcactgcag 25335

                                           
Query: 284   aagagcacaaccatgtatccatcttcttaa 313
             |||||| ||| |||||||| | ||||||||
Sbjct: 25336 aagagcgcaagcatgtatcaaccttcttaa 25365

>dbj|AK120145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028J10, full
           insert sequence
          Length = 533

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 224 gatgtggattcggtggcttcggacttcatcaagcgtaagcacatgtcttgggcactccag 283
           ||||| ||||| || ||||| |||||||||||||  ||||||| | |||||||||| |||
Sbjct: 210 gatgtagattcagtagcttcagacttcatcaagctcaagcacagggcttgggcactgcag 269

                                         
Query: 284 aagagcacaaccatgtatccatcttcttaa 313
           |||||| ||| |||||||| | ||||||||
Sbjct: 270 aagagcgcaagcatgtatcaaccttcttaa 299

>dbj|AK061660.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E01, full
           insert sequence
          Length = 535

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 224 gatgtggattcggtggcttcggacttcatcaagcgtaagcacatgtcttgggcactccag 283
           ||||| ||||| || ||||| |||||||||||||  ||||||| | |||||||||| |||
Sbjct: 212 gatgtagattcagtagcttcagacttcatcaagctcaagcacagggcttgggcactgcag 271

                                         
Query: 284 aagagcacaaccatgtatccatcttcttaa 313
           |||||| ||| |||||||| | ||||||||
Sbjct: 272 aagagcgcaagcatgtatcaaccttcttaa 301

>gb|U50300.1| Caenorhabditis elegans cosmid R03H4, complete sequence
          Length = 24384

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 121   gaaagaagtagcagtgggagcaaac 145
             |||||||||||||| ||||||||||
Sbjct: 23315 gaaagaagtagcagagggagcaaac 23291

>emb|AL035411.28|HS592A1 Human DNA sequence from clone RP4-592A1 on chromosome 1p31.2-32.3
              Contains the 3' end of a novel gene (KIAA1915), an
              adenylate kinase 2 (AK2) pseudogene, the TACSTD2 gene for
              tumor-associated calcium signal transducer 2 and a CpG
              island, complete sequence
          Length = 146112

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 488    actgtatgatattcttatata 508
              |||||||||||||||||||||
Sbjct: 137447 actgtatgatattcttatata 137427

>emb|CR627323.1| Homo sapiens mRNA; cDNA DKFZp779J1554 (from clone DKFZp779J1554)
          Length = 4480

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 488  actgtatgatattcttatata 508
            |||||||||||||||||||||
Sbjct: 2368 actgtatgatattcttatata 2388

>ref|NM_001028896.1| Caenorhabditis elegans Serpentine Receptor, class SX family member
           (srsx-20) (srsx-20) mRNA, complete cds
          Length = 828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 121 gaaagaagtagcagtgggagcaaac 145
           |||||||||||||| ||||||||||
Sbjct: 694 gaaagaagtagcagagggagcaaac 718

>gb|DQ445623.1| Lycopersicon esculentum clone BAC LE_HBa0181K01 LARD2
            retrotransposon, complete sequence
          Length = 3762

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 348  cttatgctctgtccagcatgaaag 371
            ||||||||||||||||||| ||||
Sbjct: 1768 cttatgctctgtccagcattaaag 1791

>emb|AJ404970.1|DRE404970 Danio rerio mRNA for glycine receptor alphaZ2 subunit (glyR alpha
           gene)
          Length = 2045

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 caaaaaacaagtcaggtttc 179
           ||||||||||||||||||||
Sbjct: 919 caaaaaacaagtcaggtttc 900

>emb|BX571718.9| Zebrafish DNA sequence from clone DKEYP-111A10 in linkage group 14,
             complete sequence
          Length = 168697

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   caaaaaacaagtcaggtttc 179
             ||||||||||||||||||||
Sbjct: 34099 caaaaaacaagtcaggtttc 34118

>gb|AC021761.8| Homo sapiens chromosome 11, clone RP11-361M6, complete sequence
          Length = 182789

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    ttatggtgttcttatttgta 444
              ||||||||||||||||||||
Sbjct: 153389 ttatggtgttcttatttgta 153408

>ref|XM_693181.1| PREDICTED: Danio rerio similar to Glra4a protein (LOC569772), mRNA
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 caaaaaacaagtcaggtttc 179
           ||||||||||||||||||||
Sbjct: 556 caaaaaacaagtcaggtttc 537

>gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    ttcttatttgtaacatgaat 452
              ||||||||||||||||||||
Sbjct: 163116 ttcttatttgtaacatgaat 163097

>gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, complete sequence
          Length = 210320

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     gcccaccatccccatgccaa 90
              ||||||||||||||||||||
Sbjct: 169415 gcccaccatccccatgccaa 169434

>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence
          Length = 179961

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    gcccaccatccccatgccaa 90
             ||||||||||||||||||||
Sbjct: 57749 gcccaccatccccatgccaa 57768

>ref|NM_131782.1| Danio rerio glycine receptor, alpha 4a (glra4a), mRNA
          Length = 2045

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 caaaaaacaagtcaggtttc 179
           ||||||||||||||||||||
Sbjct: 919 caaaaaacaagtcaggtttc 900

>gb|BC090676.1| Danio rerio glycine receptor, alpha 4a, mRNA (cDNA clone MGC:113093
           IMAGE:6894068), complete cds
          Length = 1720

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 caaaaaacaagtcaggtttc 179
           ||||||||||||||||||||
Sbjct: 570 caaaaaacaagtcaggtttc 551

>gb|AC153873.5| Mus musculus 10 BAC RP23-87M12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207864

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tgtcttgggcactccagaag 286
             ||||||||||||||||||||
Sbjct: 78137 tgtcttgggcactccagaag 78156

>emb|AJ330097.1|HSA330097 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XI1R
          Length = 727

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 305 tcttcttaagagaaccagggttcc 328
           |||||||||||||| |||||||||
Sbjct: 507 tcttcttaagagaaacagggttcc 484

>emb|BX005218.6| Zebrafish DNA sequence from clone CH211-127L12 in linkage group 14,
              complete sequence
          Length = 183670

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    caaaaaacaagtcaggtttc 179
              ||||||||||||||||||||
Sbjct: 175116 caaaaaacaagtcaggtttc 175135

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 172     caggtttcaggacaaccatg 191
               ||||||||||||||||||||
Sbjct: 2265622 caggtttcaggacaaccatg 2265603


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,218,860
Number of Sequences: 3902068
Number of extensions: 4218860
Number of successful extensions: 77105
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77033
Number of HSP's gapped (non-prelim): 72
length of query: 520
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 497
effective length of database: 17,143,297,704
effective search space: 8520218958888
effective search space used: 8520218958888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)