ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467536.1| Oryza sativa (japonica cultivar-group), mRNA 664 0.0
2gb|AY104650.1| Zea mays PCO104630 mRNA sequence 632 e-178
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
4dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
5dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
6ref|NM_124996.2| Arabidopsis thaliana nucleic acid binding AT5G5... 111 3e-21
7gb|BT000873.1| Arabidopsis thaliana clone C104982 putative RNA-b... 111 3e-21
8gb|AY080852.1| Arabidopsis thaliana putative RNA-binding protein... 111 3e-21
9emb|BX831319.1|CNS09YRQ Arabidopsis thaliana Full-length cDNA Co... 111 3e-21
10dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 101 3e-18
11ref|NM_118781.1| Arabidopsis thaliana nucleic acid binding AT4G2... 68 4e-08
12gb|AY091120.1| Arabidopsis thaliana unknown protein (At4g26480) ... 68 4e-08
13emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 44 0.52
14emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, B... 44 0.52
15emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 ... 44 0.52
16gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete... 42 2.1
17gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, r... 42 2.1
18gb|DQ015703.1| Homo sapiens mitogen-activated protein kinase kin... 42 2.1
19gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28... 42 2.1
20gb|AC004723.1|AC004723 Drosophila melanogaster, chromosome 2L, r... 42 2.1
21gb|AC005244.1|AC005244 Homo sapiens chromosome 17, clone hRPK.47... 42 2.1
22gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
23gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, comple... 40 8.1
24emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 ... 40 8.1
25emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in ... 40 8.1
26gb|AC010125.4| Homo sapiens PAC clone RP5-1075C10 from 7, comple... 40 8.1
27emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 i... 40 8.1
28emb|AL512422.19| Human DNA sequence from clone RP11-472M19 on ch... 40 8.1
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
30gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, comp... 40 8.1
31gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, co... 40 8.1
32emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in... 40 8.1
33dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.1
34emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chro... 40 8.1 
>ref|XM_467536.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1026

 Score =  664 bits (335), Expect = 0.0
 Identities = 511/569 (89%), Gaps = 3/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  agcgccacaagctgaacccgtttgtcccggtgctccctcatagcatccgcttgctgaatc 84
           |||| |||||||||| ||||||  |||| ||||||||| ||||  | ||  |||||||||
Sbjct: 299 agcggcacaagctgagcccgttcatcccagtgctccctaatagtgtacggctgctgaatc 358

                                                                       
Query: 85  aagaaattttacgtgtttccacactattggagaacgcctcccttttaaaccaaagtggct 144
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 359 aagaaattttacgtgtttccacactattggagaacgcgtcccttttaaatcaaagtggcc 418

                                                                       
Query: 145 ttgaacatggtagtccactaacatcgggaggattatattcaaatggagcagcaactgata 204
           ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 419 ttgaacatggtagtccactaacaactggaggattatattcaaatggagcagcagctgata 478

                                                                       
Query: 205 tgaatggatggacatcagcgtttcaatcagaaagttcatcagcagcttatagctggcttg 264
           ||||||| ||||||||||| |||||||||||| ||||| ||||   ||||||||||| ||
Sbjct: 479 tgaatgggtggacatcagcatttcaatcagaaggttcaccagc---ttatagctggcgtg 535

                                                                       
Query: 265 gaggctctcaaggcagctcgtctggactaattgggaagaaaacaatgagggttgatatcc 324
           |||| ||||||||||| || |||||||||||||  |||||||| |||| |||||||||||
Sbjct: 536 gaggttctcaaggcagttcctctggactaattgttaagaaaaccatgaaggttgatatcc 595

                                                                       
Query: 325 cagtagacaaatatccaacatacaattttgttggtcgcatccttggtcccagaggaaatt 384
           |||||||||||||||| |||| |||||| ||||| |||||||||||||| ||||||||||
Sbjct: 596 cagtagacaaatatcccacattcaatttcgttggccgcatccttggtcctagaggaaatt 655

                                                                       
Query: 385 ccttgaagcgagtggaggcaactactgactgccgtgttcttataagaggccgcggtagca 444
           | |||||||||||||| ||||| || ||||||||||| ||||||||||| || || ||||
Sbjct: 656 ctttgaagcgagtggaagcaaccaccgactgccgtgtgcttataagaggtcggggaagca 715

                                                                       
Query: 445 ttaaagatccagctcgggaggacatgatgcgtggaaagccaggatatgaacatcttaatg 504
           ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| ||||
Sbjct: 716 ttaaagatccagctcgggaggacatgatgcgagggaaaccaggttatgaacatctgaatg 775

                                                                       
Query: 505 aacccctacatatattggttgaggcagagctgcctgttgaaattattgatgctcgtctga 564
           ||||||| || ||||||||||||||||| ||||||||||||||||||||| | |||||||
Sbjct: 776 aacccctgcacatattggttgaggcagaactgcctgttgaaattattgatacccgtctga 835

                                        
Query: 565 tgcaagcccgtgagatccttgaggatctg 593
           | ||||||||||| |||||||| ||||||
Sbjct: 836 tccaagcccgtgatatccttgaagatctg 864
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>gb|AY104650.1| Zea mays PCO104630 mRNA sequence
          Length = 1431

 Score =  632 bits (319), Expect = e-178
 Identities = 495/553 (89%), Gaps = 3/553 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  cccgtttgtcccggtgctccctcatagcatccgcttgctgaatcaagaaattttacgtgt 100
           |||||| ||||| ||| |||| |||||  | |||||||||||||||||||||||||||||
Sbjct: 274 cccgttcgtcccagtgatcccgcatagtgtacgcttgctgaatcaagaaattttacgtgt 333

                                                                       
Query: 101 ttccacactattggagaacgcctcccttttaaaccaaagtggctttgaacatggtagtcc 160
           ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||
Sbjct: 334 ttccacactattggagaacgcatcccttttaaatcaaagtggccttgaacatggtagtcc 393

                                                                       
Query: 161 actaacatcgggaggattatattcaaatggagcagcaactgatatgaatggatggacatc 220
           ||||||| | |||||||||||||||||||||||||| ||||| |||||||  ||||||||
Sbjct: 394 actaacaacaggaggattatattcaaatggagcagctactgacatgaatgtgtggacatc 453

                                                                       
Query: 221 agcgtttcaatcagaaagttcatcagcagcttatagctggcttggaggctctcaaggcag 280
           ||| |||||| |||| |||||| ||||   |||||||||||||||||| || || |||||
Sbjct: 454 agcatttcaaccagagagttcaccagc---ttatagctggcttggaggatcccagggcag 510

                                                                       
Query: 281 ctcgtctggactaattgggaagaaaacaatgagggttgatatcccagtagacaaatatcc 340
           ||| |||||||| ||||  ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 511 ctcctctggacttattgtcaagaaaacaatgaaggtcgatatcccagtagacaaatatcc 570

                                                                       
Query: 341 aacatacaattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtgga 400
           ||||| |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 571 aacattcaatttcgttggccgcatccttggtccaagaggaaattccttgaagcgggtgga 630

                                                                       
Query: 401 ggcaactactgactgccgtgttcttataagaggccgcggtagcattaaagatccagctcg 460
           ||||| ||| ||||||||||| || |||||||| || || ||||| ||||||||||| ||
Sbjct: 631 ggcaaatacggactgccgtgtgctaataagaggtcgtggcagcatcaaagatccagcacg 690

                                                                       
Query: 461 ggaggacatgatgcgtggaaagccaggatatgaacatcttaatgaacccctacatatatt 520
           |||||| |||||||| || ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 691 ggaggaaatgatgcgagggaagccaggatatgaacacctgaatgaacccctccatatatt 750

                                                                       
Query: 521 ggttgaggcagagctgcctgttgaaattattgatgctcgtctgatgcaagcccgtgagat 580
           ||||||||||||||| ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 751 ggttgaggcagagctacctgttgaaatcattgatgcgcgcctgatgcaagcccgcgagat 810

                        
Query: 581 ccttgaggatctg 593
           |||||| ||||||
Sbjct: 811 ccttgaagatctg 823
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Plus

                                                                            
Query: 86       agaaattttacgtgtttccacactattggagaacgcctcccttttaaaccaaagtggctt 145
                |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct: 30031661 agaaattttacgtgtttccacactattggagaacgcgtcccttttaaatcaaagtggcct 30031720

                                                                            
Query: 146      tgaacatggtagtccactaacatcgggaggattatattcaaatggagcagcaactgatat 205
                |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 30031721 tgaacatggtagtccactaacaactggaggattatattcaaatggagcagcagctgatat 30031780

                                               
Query: 206      gaatggatggacatcagcgtttcaatcagaa 236
                |||||| ||||||||||| ||||||||||||
Sbjct: 30031781 gaatgggtggacatcagcatttcaatcagaa 30031811



 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                            
Query: 461      ggaggacatgatgcgtggaaagccaggatatgaacatcttaatgaacccctacatatatt 520
                ||||||||||||||| || || ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 30033250 ggaggacatgatgcgagggaaaccaggttatgaacatctgaatgaacccctgcacatatt 30033309

                                                                            
Query: 521      ggttgaggcagagctgcctgttgaaattattgatgctcgtctgatgcaagcccgtgagat 580
                |||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||| ||
Sbjct: 30033310 ggttgaggcagaactgcctgttgaaattattgatacccgtctgatccaagcccgtgatat 30033369

                             
Query: 581      ccttgaggatctg 593
                |||||| ||||||
Sbjct: 30033370 ccttgaagatctg 30033382



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                            
Query: 347      caattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggcaac 406
                |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 30032781 caatttcgttggccgcatccttggtcctagaggaaattctttgaagcgagtggaagcaac 30032840

                                                                        
Query: 407      tactgactgccgtgttcttataagaggccgcggtagcattaaagatccagctcggg 462
                 || ||||||||||| ||||||||||| || || ||||||||||||||||||||||
Sbjct: 30032841 caccgactgccgtgtgcttataagaggtcggggaagcattaaagatccagctcggg 30032896



 Score =  123 bits (62), Expect = 7e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                            
Query: 247      cagcttatagctggcttggaggctctcaaggcagctcgtctggactaattgggaagaaaa 306
                ||||||||||||||| |||||| ||||||||||| || |||||||||||||  |||||||
Sbjct: 30032588 cagcttatagctggcgtggaggttctcaaggcagttcctctggactaattgttaagaaaa 30032647

                                                  
Query: 307      caatgagggttgatatcccagtagacaaatatcc 340
                | |||| |||||||||||||||||||||||||||
Sbjct: 30032648 ccatgaaggttgatatcccagtagacaaatatcc 30032681
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Plus

                                                                         
Query: 86    agaaattttacgtgtttccacactattggagaacgcctcccttttaaaccaaagtggctt 145
             |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct: 11258 agaaattttacgtgtttccacactattggagaacgcgtcccttttaaatcaaagtggcct 11317

                                                                         
Query: 146   tgaacatggtagtccactaacatcgggaggattatattcaaatggagcagcaactgatat 205
             |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 11318 tgaacatggtagtccactaacaactggaggattatattcaaatggagcagcagctgatat 11377

                                            
Query: 206   gaatggatggacatcagcgtttcaatcagaa 236
             |||||| ||||||||||| ||||||||||||
Sbjct: 11378 gaatgggtggacatcagcatttcaatcagaa 11408



 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                         
Query: 461   ggaggacatgatgcgtggaaagccaggatatgaacatcttaatgaacccctacatatatt 520
             ||||||||||||||| || || ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 12847 ggaggacatgatgcgagggaaaccaggttatgaacatctgaatgaacccctgcacatatt 12906

                                                                         
Query: 521   ggttgaggcagagctgcctgttgaaattattgatgctcgtctgatgcaagcccgtgagat 580
             |||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||| ||
Sbjct: 12907 ggttgaggcagaactgcctgttgaaattattgatacccgtctgatccaagcccgtgatat 12966

                          
Query: 581   ccttgaggatctg 593
             |||||| ||||||
Sbjct: 12967 ccttgaagatctg 12979



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                         
Query: 347   caattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggcaac 406
             |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 12378 caatttcgttggccgcatccttggtcctagaggaaattctttgaagcgagtggaagcaac 12437

                                                                     
Query: 407   tactgactgccgtgttcttataagaggccgcggtagcattaaagatccagctcggg 462
              || ||||||||||| ||||||||||| || || ||||||||||||||||||||||
Sbjct: 12438 caccgactgccgtgtgcttataagaggtcggggaagcattaaagatccagctcggg 12493



 Score =  123 bits (62), Expect = 7e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                         
Query: 247   cagcttatagctggcttggaggctctcaaggcagctcgtctggactaattgggaagaaaa 306
             ||||||||||||||| |||||| ||||||||||| || |||||||||||||  |||||||
Sbjct: 12185 cagcttatagctggcgtggaggttctcaaggcagttcctctggactaattgttaagaaaa 12244

                                               
Query: 307   caatgagggttgatatcccagtagacaaatatcc 340
             | |||| |||||||||||||||||||||||||||
Sbjct: 12245 ccatgaaggttgatatcccagtagacaaatatcc 12278
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654B04
          Length = 156907

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Plus

                                                                          
Query: 86     agaaattttacgtgtttccacactattggagaacgcctcccttttaaaccaaagtggctt 145
              |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct: 131937 agaaattttacgtgtttccacactattggagaacgcgtcccttttaaatcaaagtggcct 131996

                                                                          
Query: 146    tgaacatggtagtccactaacatcgggaggattatattcaaatggagcagcaactgatat 205
              |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 131997 tgaacatggtagtccactaacaactggaggattatattcaaatggagcagcagctgatat 132056

                                             
Query: 206    gaatggatggacatcagcgtttcaatcagaa 236
              |||||| ||||||||||| ||||||||||||
Sbjct: 132057 gaatgggtggacatcagcatttcaatcagaa 132087



 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                          
Query: 461    ggaggacatgatgcgtggaaagccaggatatgaacatcttaatgaacccctacatatatt 520
              ||||||||||||||| || || ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 133526 ggaggacatgatgcgagggaaaccaggttatgaacatctgaatgaacccctgcacatatt 133585

                                                                          
Query: 521    ggttgaggcagagctgcctgttgaaattattgatgctcgtctgatgcaagcccgtgagat 580
              |||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||| ||
Sbjct: 133586 ggttgaggcagaactgcctgttgaaattattgatacccgtctgatccaagcccgtgatat 133645

                           
Query: 581    ccttgaggatctg 593
              |||||| ||||||
Sbjct: 133646 ccttgaagatctg 133658



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                          
Query: 347    caattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggcaac 406
              |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 133057 caatttcgttggccgcatccttggtcctagaggaaattctttgaagcgagtggaagcaac 133116

                                                                      
Query: 407    tactgactgccgtgttcttataagaggccgcggtagcattaaagatccagctcggg 462
               || ||||||||||| ||||||||||| || || ||||||||||||||||||||||
Sbjct: 133117 caccgactgccgtgtgcttataagaggtcggggaagcattaaagatccagctcggg 133172



 Score =  123 bits (62), Expect = 7e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                          
Query: 247    cagcttatagctggcttggaggctctcaaggcagctcgtctggactaattgggaagaaaa 306
              ||||||||||||||| |||||| ||||||||||| || |||||||||||||  |||||||
Sbjct: 132864 cagcttatagctggcgtggaggttctcaaggcagttcctctggactaattgttaagaaaa 132923

                                                
Query: 307    caatgagggttgatatcccagtagacaaatatcc 340
              | |||| |||||||||||||||||||||||||||
Sbjct: 132924 ccatgaaggttgatatcccagtagacaaatatcc 132957
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>ref|NM_124996.2| Arabidopsis thaliana nucleic acid binding AT5G56140 mRNA, complete
           cds
          Length = 1359

 Score =  111 bits (56), Expect = 3e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 306 acaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcatc 365
           ||||| ||||| ||||| ||||| ||||| ||||| |  | |||||||||||||||| ||
Sbjct: 499 acaatcagggtcgatattccagtcgacaattatccgaatttcaattttgttggtcgcctc 558

                                                                       
Query: 366 cttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttctt 425
           || ||||| |||||||| ||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 559 ctgggtcctagaggaaactccctgaagcgagttgaagcaagtactgattgccgtgttctt 618

                   
Query: 426 ataagagg 433
           ||||||||
Sbjct: 619 ataagagg 626
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>gb|BT000873.1| Arabidopsis thaliana clone C104982 putative RNA-binding protein
           (At5g56140) mRNA, complete cds
          Length = 979

 Score =  111 bits (56), Expect = 3e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 306 acaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcatc 365
           ||||| ||||| ||||| ||||| ||||| ||||| |  | |||||||||||||||| ||
Sbjct: 499 acaatcagggtcgatattccagtcgacaattatccgaatttcaattttgttggtcgcctc 558

                                                                       
Query: 366 cttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttctt 425
           || ||||| |||||||| ||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 559 ctgggtcctagaggaaactccctgaagcgagttgaagcaagtactgattgccgtgttctt 618

                   
Query: 426 ataagagg 433
           ||||||||
Sbjct: 619 ataagagg 626
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>gb|AY080852.1| Arabidopsis thaliana putative RNA-binding protein (At5g56140) mRNA,
           partial cds
          Length = 1205

 Score =  111 bits (56), Expect = 3e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 306 acaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcatc 365
           ||||| ||||| ||||| ||||| ||||| ||||| |  | |||||||||||||||| ||
Sbjct: 334 acaatcagggtcgatattccagtcgacaattatccgaatttcaattttgttggtcgcctc 393

                                                                       
Query: 366 cttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttctt 425
           || ||||| |||||||| ||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 394 ctgggtcctagaggaaactccctgaagcgagttgaagcaagtactgattgccgtgttctt 453

                   
Query: 426 ataagagg 433
           ||||||||
Sbjct: 454 ataagagg 461
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>emb|BX831319.1|CNS09YRQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS78ZD07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1261

 Score =  111 bits (56), Expect = 3e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 306 acaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcatc 365
           ||||| ||||| ||||| ||||| ||||| ||||| |  | |||||||||||||||| ||
Sbjct: 450 acaatcagggtcgatattccagtcgacaattatccgaatttcaattttgttggtcgcctc 509

                                                                       
Query: 366 cttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttctt 425
           || ||||| |||||||| ||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 510 ctgggtcctagaggaaactccctgaagcgagttgaagcaagtactgattgccgtgttctt 569

                   
Query: 426 ataagagg 433
           ||||||||
Sbjct: 570 ataagagg 577
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>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                         
Query: 347   caattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggcaac 406
             |||||||||||||||| |||| ||||| |||||||| ||| |||||||||| || |||| 
Sbjct: 61680 caattttgttggtcgcctcctgggtcctagaggaaactccctgaagcgagttgaagcaag 61739

                                        
Query: 407   tactgactgccgtgttcttataagagg 433
             |||||| ||||||||||||||||||||
Sbjct: 61740 tactgattgccgtgttcttataagagg 61766
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>ref|NM_118781.1| Arabidopsis thaliana nucleic acid binding AT4G26480 mRNA, complete
            cds
          Length = 1668

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Plus

                                                                        
Query: 305  aacaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcat 364
            |||||| ||||| ||||| ||||| |||||||| ||||  ||||||||||| |||||  |
Sbjct: 1221 aacaataagggtggatattccagtcgacaaatacccaaactacaattttgtcggtcgtct 1280

                                                                        
Query: 365  ccttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttct 424
            | | ||||| |||||||| ||| | || ||||| || || | |||||| || ||||||||
Sbjct: 1281 cttgggtcctagaggaaactccctcaaacgagttgaagcgagtactgattgtcgtgttct 1340

                                          
Query: 425  tataagaggccgcggtagcattaaagatcc 454
             ||||| ||  | || ||||||||||||||
Sbjct: 1341 aataaggggtagaggcagcattaaagatcc 1370
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>gb|AY091120.1| Arabidopsis thaliana unknown protein (At4g26480) mRNA, complete cds
          Length = 1567

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Plus

                                                                       
Query: 305 aacaatgagggttgatatcccagtagacaaatatccaacatacaattttgttggtcgcat 364
           |||||| ||||| ||||| ||||| |||||||| ||||  ||||||||||| |||||  |
Sbjct: 650 aacaataagggtggatattccagtcgacaaatacccaaactacaattttgtcggtcgtct 709

                                                                       
Query: 365 ccttggtcccagaggaaattccttgaagcgagtggaggcaactactgactgccgtgttct 424
           | | ||||| |||||||| ||| | || ||||| || || | |||||| || ||||||||
Sbjct: 710 cttgggtcctagaggaaactccctcaaacgagttgaagcgagtactgattgtcgtgttct 769

                                         
Query: 425 tataagaggccgcggtagcattaaagatcc 454
            ||||| ||  | || ||||||||||||||
Sbjct: 770 aataaggggtagaggcagcattaaagatcc 799
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>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 345   tacaattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggca 404
             ||||||||||| |||||  || | ||||| |||||||| ||| | || ||||| || || 
Sbjct: 70643 tacaattttgtcggtcgtctcttgggtcctagaggaaactccctcaaacgagttgaagcg 70584

                                                               
Query: 405   actactgactgccgtgttcttataagaggccgcggtagcattaaagatcc 454
             | |||||| || |||||||| ||||| ||  | || ||||||||||||||
Sbjct: 70583 agtactgattgtcgtgttctaataaggggtagaggcagcattaaagatcc 70534
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>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA
            project)
          Length = 92657

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 345  tacaattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggca 404
            ||||||||||| |||||  || | ||||| |||||||| ||| | || ||||| || || 
Sbjct: 2507 tacaattttgtcggtcgtctcttgggtcctagaggaaactccctcaaacgagttgaagcg 2448

                                                              
Query: 405  actactgactgccgtgttcttataagaggccgcggtagcattaaagatcc 454
            | |||||| || |||||||| ||||| ||  | || ||||||||||||||
Sbjct: 2447 agtactgattgtcgtgttctaataaggggtagaggcagcattaaagatcc 2398
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>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                         
Query: 345   tacaattttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggca 404
             ||||||||||| |||||  || | ||||| |||||||| ||| | || ||||| || || 
Sbjct: 35765 tacaattttgtcggtcgtctcttgggtcctagaggaaactccctcaaacgagttgaagcg 35824

                                                               
Query: 405   actactgactgccgtgttcttataagaggccgcggtagcattaaagatcc 454
             | |||||| || |||||||| ||||| ||  | || ||||||||||||||
Sbjct: 35825 agtactgattgtcgtgttctaataaggggtagaggcagcattaaagatcc 35874
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>gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete sequence
          Length = 166722

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 325    cagtagacaaatatccaacatacaattttgttg 357
              |||||||||||| |  |||||||||||||||||
Sbjct: 153394 cagtagacaaatgttaaacatacaattttgttg 153362
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>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone
             BACR31D05, complete sequence
          Length = 172633

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 325   cagtagacaaatatccaacatacaattttgttg 357
             |||||||||||| |  |||||||||||||||||
Sbjct: 54151 cagtagacaaatgttaaacatacaattttgttg 54119
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>gb|DQ015703.1| Homo sapiens mitogen-activated protein kinase kinase 4 (MAP2K4) gene,
             complete cds
          Length = 125331

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   ctggactaattgggaagaaaa 306
             |||||||||||||||||||||
Sbjct: 83287 ctggactaattgggaagaaaa 83267
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>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete
             sequence
          Length = 289516

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 325   cagtagacaaatatccaacatacaattttgttg 357
             |||||||||||| |  |||||||||||||||||
Sbjct: 24541 cagtagacaaatgttaaacatacaattttgttg 24509
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>gb|AC004723.1|AC004723 Drosophila melanogaster, chromosome 2L, region 28C4-28D2, P1 clone
             DS00289, complete sequence
          Length = 52277

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 325   cagtagacaaatatccaacatacaattttgttg 357
             |||||||||||| |  |||||||||||||||||
Sbjct: 20053 cagtagacaaatgttaaacatacaattttgttg 20021
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>gb|AC005244.1|AC005244 Homo sapiens chromosome 17, clone hRPK.471_L_13, complete sequence
          Length = 127506

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    ctggactaattgggaagaaaa 306
              |||||||||||||||||||||
Sbjct: 118842 ctggactaattgggaagaaaa 118862
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 533    gctgcctgttgaaattattg 552
              ||||||||||||||||||||
Sbjct: 117406 gctgcctgttgaaattattg 117425
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>gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, complete sequence
          Length = 117381

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   atatattggttgaggcagag 533
             ||||||||||||||||||||
Sbjct: 11883 atatattggttgaggcagag 11864
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>emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 in linkage group 21,
             complete sequence
          Length = 176058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   ctgttgaaattattgatgct 557
             ||||||||||||||||||||
Sbjct: 25793 ctgttgaaattattgatgct 25774
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>emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in linkage group 22, complete
              sequence
          Length = 222575

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 296    tgggaagaaaacaatgagggttgatatcccag 327
              ||||||| |||||| | |||||||||||||||
Sbjct: 165642 tgggaaggaaacaaagggggttgatatcccag 165673
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>gb|AC010125.4| Homo sapiens PAC clone RP5-1075C10 from 7, complete sequence
          Length = 171457

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ttgggaagaaaacaatgagg 314
              ||||||||||||||||||||
Sbjct: 113914 ttgggaagaaaacaatgagg 113933
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>emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 in linkage group 16,
             complete sequence
          Length = 214872

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 296   tgggaagaaaacaatgagggttgatatcccag 327
             ||||||| |||||| | |||||||||||||||
Sbjct: 34639 tgggaaggaaacaaagggggttgatatcccag 34608
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>emb|AL512422.19| Human DNA sequence from clone RP11-472M19 on chromosome 6 Contains part
             of the BPAG1 gene for bullous pemphigoid antigen 1
             (230/240kD), a novel gene, a ribosomal protein L17 (RPL17)
             pseudogene and three CpG islands, complete sequence
          Length = 157918

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   tggactaattgggaagaaaa 306
             ||||||||||||||||||||
Sbjct: 63578 tggactaattgggaagaaaa 63559
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 533     gctgcctgttgaaattattg 552
               ||||||||||||||||||||
Sbjct: 2670886 gctgcctgttgaaattattg 2670905
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>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence
          Length = 177317

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   tggtcccagaggaaattccttgaa 391
             ||||||||||||||||| ||||||
Sbjct: 29321 tggtcccagaggaaatttcttgaa 29344
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>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence
          Length = 182865

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 368   tggtcccagaggaaattccttgaa 391
             ||||||||||||||||| ||||||
Sbjct: 97671 tggtcccagaggaaatttcttgaa 97648
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>emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in linkage group 21,
              complete sequence
          Length = 192865

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 538    ctgttgaaattattgatgct 557
              ||||||||||||||||||||
Sbjct: 166793 ctgttgaaattattgatgct 166774
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>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083,
              complete sequence
          Length = 120016

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 86/108 (79%)
 Strand = Plus / Plus

                                                                          
Query: 351    tttgttggtcgcatccttggtcccagaggaaattccttgaagcgagtggaggcaactact 410
              |||||||||||| |||| || || |||||||| ||  | ||||| || || |||| ||||
Sbjct: 103508 tttgttggtcgcctcctaggccctagaggaaactctctaaagcgcgtagaagcaagtact 103567

                                                              
Query: 411    gactgccgtgttcttataagaggccgcggtagcattaaagatccagct 458
              || || |||||  | || || ||||| |||||||| || |||||||||
Sbjct: 103568 gattgtcgtgtcttgatcaggggccgaggtagcataaaggatccagct 103615
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>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete
            sequence
          Length = 201897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  aatatccaacatacaatttt 353
            ||||||||||||||||||||
Sbjct: 4814 aatatccaacatacaatttt 4795


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,114,894
Number of Sequences: 3902068
Number of extensions: 5114894
Number of successful extensions: 89897
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89749
Number of HSP's gapped (non-prelim): 146
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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