ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal3i24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 680 bits (343), Expect = 0.0 Identities = 460/499 (92%) Strand = Plus / Plus Query: 4 gtaccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatga 63 ||||||||||||||| |||||||| |||||||| |||||||| ||||| || |||||||| Sbjct: 930 gtaccgtggagagttcgaagaaagactgaagaaacttatggaggaaatcaaacaaaatga 989 Query: 64 tgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaagg 123 ||| ||||| |||||||||||||||||||||||| | || ||||||||||| |||||||| Sbjct: 990 tgacattattctctttattgatgaagtgcacacgctaattggagcaggtgctgctgaagg 1049 Query: 124 tgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcat 183 ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1050 tgcaattgatgctgccaacatcttgaaaccagctcttgctagaggtgaactgcagtgcat 1109 Query: 184 tggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1110 tggtgccacaacacttgatgagtacaggaaacatattgagaaagatccagctttagagcg 1169 Query: 244 aaggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaag 303 | ||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 1170 acggtttcaaccagttaaggttccagagccaactgttgatgaaacaatacaaatcttaag 1229 Query: 304 aggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagt 363 ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| | Sbjct: 1230 aggacttcgtgagcgatatgaactgcatcataagctgcgatacacagatgattctttaat 1289 Query: 364 tgctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctat 423 ||||||||| || || || || ||||||||||||||||||||||||||||| |||||||| Sbjct: 1290 tgctgcagcacaattgtcataccagtatatcagtgatcgcttcctgcctgataaggctat 1349 Query: 424 tgacttgattgatgaagcggggtcccgtgttaggctcaggcatgcacagctacctgatga 483 |||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| Sbjct: 1350 tgacttgattgatgaagcaggatctcgtgttaggctcaggcatgcacagctccctgatga 1409 Query: 484 ggccaaggagctggacaaa 502 |||||||||||||||||| Sbjct: 1410 agccaaggagctggacaaa 1428
>gb|AY103877.1| Zea mays PCO122935 mRNA sequence Length = 1798 Score = 345 bits (174), Expect = 9e-92 Identities = 288/326 (88%) Strand = Plus / Plus Query: 177 agtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctt 236 ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| | Sbjct: 854 agtgcattggtgccacaacactggatgagtataggaagcatatagagaaagatcctgcct 913 Query: 237 tggagcgaaggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaa 296 |||| |||||||||||||||| |||||||| ||||| ||| | || ||| ||||||| | Sbjct: 914 tggaaagaaggtttcaaccagttaaggttcctgagcctactatggatgaaacaatacaga 973 Query: 297 tcttaagaggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatg 356 |||||||||| || ||||||||||||||||||||||| || ||| ||||||||||||||| Sbjct: 974 tcttaagagggctccgtgagagatatgaacttcatcacaaactgagatacacagatgatg 1033 Query: 357 ctttagttgctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgaca 416 ||||| ||||||| || ||| | || |||||||||||||| ||||| || |||||||||| Sbjct: 1034 ctttaattgctgctgcacagctgtcttatcagtatatcagcgatcgttttctgcctgaca 1093 Query: 417 aggctattgacttgattgatgaagcggggtcccgtgttaggctcaggcatgcacagctac 476 | || |||||||||||||||||||| || || ||||||||||| |||||||| ||||| | Sbjct: 1094 aagccattgacttgattgatgaagctggatctcgtgttaggctgaggcatgcccagctcc 1153 Query: 477 ctgatgaggccaaggagctggacaaa 502 ||||||| ||||| |||||||||||| Sbjct: 1154 ctgatgaagccaaagagctggacaaa 1179 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 652 taccgtggagagtttgaagtgagactaaagaaacttatggaggaaattaagcaaaatgaa 711 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || ||||| |||||||||||| |||||||||| |||| |||||||||||||| |||||| Sbjct: 712 gacattattctctttattgattaagtgcacacactgattggagcaggtgcagcagaaggt 771 Query: 125 gcaattgatgctgctaa 141 | ||||||||||||||| Sbjct: 772 gtaattgatgctgctaa 788
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 295 bits (149), Expect = 7e-77 Identities = 203/221 (91%) Strand = Plus / Minus Query: 176 cagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgct 235 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 19613137 cagtgcattggtgccacaacacttgatgagtacaggaaacatattgagaaagatccagct 19613078 Query: 236 ttggagcgaaggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaa 295 || |||||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||| Sbjct: 19613077 ttagagcgacggtttcaaccagttaaggttccagagccaactgttgatgaaacaatacaa 19613018 Query: 296 atcttaagaggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgat 355 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 19613017 atcttaagaggacttcgtgagcgatatgaactgcatcataagctgcgatacacagatgat 19612958 Query: 356 gctttagttgctgcagcgcagttatcgtatcagtatatcag 396 ||||| |||||||||| || || || || ||||||||||| Sbjct: 19612957 tctttaattgctgcagcacaattgtcataccagtatatcag 19612917 Score = 228 bits (115), Expect = 1e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 4 gtaccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatga 63 ||||||||||||||| |||||||| |||||||| |||||||| ||||| || |||||||| Sbjct: 19613507 gtaccgtggagagttcgaagaaagactgaagaaacttatggaggaaatcaaacaaaatga 19613448 Query: 64 tgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaagg 123 ||| ||||| |||||||||||||||||||||||| | || ||||||||||| |||||||| Sbjct: 19613447 tgacattattctctttattgatgaagtgcacacgctaattggagcaggtgctgctgaagg 19613388 Query: 124 tgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcag 178 ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 19613387 tgcaattgatgctgccaacatcttgaaaccagctcttgctagaggtgaactgcag 19613333 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 393 tcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtg 452 |||||||||||||||||||||| |||||||||||||||||||||||||| || || |||| Sbjct: 19612080 tcagtgatcgcttcctgcctgataaggctattgacttgattgatgaagcaggatctcgtg 19612021 Query: 453 ttaggctcaggcatgcacag 472 |||||||||||||||||||| Sbjct: 19612020 ttaggctcaggcatgcacag 19612001 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 470 cagctacctgatgaggccaaggagctggacaaa 502 ||||| |||||||| |||||||||||||||||| Sbjct: 19611922 cagctccctgatgaagccaaggagctggacaaa 19611890
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 295 bits (149), Expect = 7e-77 Identities = 203/221 (91%) Strand = Plus / Minus Query: 176 cagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgct 235 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 63863 cagtgcattggtgccacaacacttgatgagtacaggaaacatattgagaaagatccagct 63804 Query: 236 ttggagcgaaggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaa 295 || |||||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||| Sbjct: 63803 ttagagcgacggtttcaaccagttaaggttccagagccaactgttgatgaaacaatacaa 63744 Query: 296 atcttaagaggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgat 355 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 63743 atcttaagaggacttcgtgagcgatatgaactgcatcataagctgcgatacacagatgat 63684 Query: 356 gctttagttgctgcagcgcagttatcgtatcagtatatcag 396 ||||| |||||||||| || || || || ||||||||||| Sbjct: 63683 tctttaattgctgcagcacaattgtcataccagtatatcag 63643 Score = 228 bits (115), Expect = 1e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 4 gtaccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatga 63 ||||||||||||||| |||||||| |||||||| |||||||| ||||| || |||||||| Sbjct: 64233 gtaccgtggagagttcgaagaaagactgaagaaacttatggaggaaatcaaacaaaatga 64174 Query: 64 tgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaagg 123 ||| ||||| |||||||||||||||||||||||| | || ||||||||||| |||||||| Sbjct: 64173 tgacattattctctttattgatgaagtgcacacgctaattggagcaggtgctgctgaagg 64114 Query: 124 tgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcag 178 ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 64113 tgcaattgatgctgccaacatcttgaaaccagctcttgctagaggtgaactgcag 64059 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 393 tcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtg 452 |||||||||||||||||||||| |||||||||||||||||||||||||| || || |||| Sbjct: 62806 tcagtgatcgcttcctgcctgataaggctattgacttgattgatgaagcaggatctcgtg 62747 Query: 453 ttaggctcaggcatgcacag 472 |||||||||||||||||||| Sbjct: 62746 ttaggctcaggcatgcacag 62727 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 470 cagctacctgatgaggccaaggagctggacaaa 502 ||||| |||||||| |||||||||||||||||| Sbjct: 62648 cagctccctgatgaagccaaggagctggacaaa 62616
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 268 bits (135), Expect = 2e-68 Identities = 366/443 (82%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||||||||| || ||||| |||||||||||||||| ||||| | ||||| |||| Sbjct: 1208 taccgtggagagttcgaggaaagattgaagaagcttatggaggaaatcaggcaaagtgat 1267 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || || ||||||||||||||||||||| | ||||| ||||| || ||||||||| Sbjct: 1268 gagataattctgtttattgatgaagtgcacacgctcatcggtgcaggagccgctgaaggt 1327 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || |||||||||||||||||||| |||||||| |||||||||||| ||||||| ||| Sbjct: 1328 gcgatcgatgctgctaacatcttaaagccagctctagcaagaggtgaattgcagtgtatt 1387 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 ||||| |||||| | ||||||||||||||||| || |||||||||||||| |||||| || Sbjct: 1388 ggtgcaacaacaattgatgagtacaggaaacacattgagaaagatcctgcattggagaga 1447 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaaga 304 |||| || || || || || || || || ||||| |||||| | ||||| || || | Sbjct: 1448 cggttccagcctgtgaaagtacctgaaccaactgtagaagaagctatacagattttgcaa 1507 Query: 305 ggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagtt 364 || || |||||| | ||||| | || || || || |||||||| ||||| || || ||| Sbjct: 1508 ggtctgcgtgagcgctatgagatccaccacaaacttcgatacactgatgaagccttggtt 1567 Query: 365 gctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctatt 424 ||||| || || || || ||||||| ||||||||||| || || || ||||| || ||| Sbjct: 1568 gctgctgcacaattgtcacatcagtacatcagtgatcggtttcttcccgacaaagcgatt 1627 Query: 425 gacttgattgatgaagcggggtc 447 ||||||||||||||||| ||||| Sbjct: 1628 gacttgattgatgaagctgggtc 1650
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 268 bits (135), Expect = 2e-68 Identities = 366/443 (82%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||||||||| || ||||| |||||||||||||||| ||||| | ||||| |||| Sbjct: 1193 taccgtggagagttcgaggaaagattgaagaagcttatggaggaaatcaggcaaagtgat 1252 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || || ||||||||||||||||||||| | ||||| ||||| || ||||||||| Sbjct: 1253 gagataattctgtttattgatgaagtgcacacgctcatcggtgcaggagccgctgaaggt 1312 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || |||||||||||||||||||| |||||||| |||||||||||| ||||||| ||| Sbjct: 1313 gcgatcgatgctgctaacatcttaaagccagctctagcaagaggtgaattgcagtgtatt 1372 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 ||||| |||||| | ||||||||||||||||| || |||||||||||||| |||||| || Sbjct: 1373 ggtgcaacaacaattgatgagtacaggaaacacattgagaaagatcctgcattggagaga 1432 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaaga 304 |||| || || || || || || || || ||||| |||||| | ||||| || || | Sbjct: 1433 cggttccagcctgtgaaagtacctgaaccaactgtagaagaagctatacagattttgcaa 1492 Query: 305 ggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagtt 364 || || |||||| | ||||| | || || || || |||||||| ||||| || || ||| Sbjct: 1493 ggtctgcgtgagcgctatgagatccaccacaaacttcgatacactgatgaagccttggtt 1552 Query: 365 gctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctatt 424 ||||| || || || || ||||||| ||||||||||| || || || ||||| || ||| Sbjct: 1553 gctgctgcacaattgtcacatcagtacatcagtgatcggtttcttcccgacaaagcgatt 1612 Query: 425 gacttgattgatgaagcggggtc 447 ||||||||||||||||| ||||| Sbjct: 1613 gacttgattgatgaagctgggtc 1635
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 260 bits (131), Expect = 4e-66 Identities = 365/443 (82%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||||||||| || ||||| |||||||||||||||| ||||| | ||||| |||| Sbjct: 1208 taccgtggagagttcgaggaaagattgaagaagcttatggaggaaatcaggcaaagtgat 1267 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || || ||||||||||||||||||||| | ||||| ||||| || ||||||||| Sbjct: 1268 gagataattctgtttattgatgaagtgcacacgctcatcggtgcaggagccgctgaaggt 1327 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || |||||||||||||||||||| |||||||| |||||||||||| ||||||| ||| Sbjct: 1328 gcgatcgatgctgctaacatcttaaagccagctctagcaagaggtgaattgcagtgtatt 1387 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 ||||| |||||| | ||||||||||||||||| || |||||||||||||| |||||| || Sbjct: 1388 ggtgcaacaacaattgatgagtacaggaaacacattgagaaagatcctgcattggagaga 1447 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaaga 304 |||| || || || || || || || || ||||| |||| | | ||||| || || | Sbjct: 1448 cggttccagcctgtgaaagtacctgaaccaactgtagaaggagctatacagattttgcaa 1507 Query: 305 ggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagtt 364 || || |||||| | ||||| | || || || || |||||||| ||||| || || ||| Sbjct: 1508 ggtctgcgtgagcgctatgagatccaccacaaacttcgatacactgatgaagccttggtt 1567 Query: 365 gctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctatt 424 ||||| || || || || ||||||| ||||||||||| || || || ||||| || ||| Sbjct: 1568 gctgctgcacaattgtcacatcagtacatcagtgatcggtttcttcccgacaaagcgatt 1627 Query: 425 gacttgattgatgaagcggggtc 447 ||||||||||||||||| ||||| Sbjct: 1628 gacttgattgatgaagctgggtc 1650
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 240 bits (121), Expect = 4e-60 Identities = 358/437 (81%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || ||| ||||||| || ||||||||||| || |||| |||| Sbjct: 1084 taccgtggtgagtttgaggagaggttgaagaaactgatggaagaaatcaaacaaagtgat 1143 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 ||||||||||| ||||| |||||||||||||| | || |||||||| |||||||||||| Sbjct: 1144 gatattatactttttatcgatgaagtgcacactctaattggagcaggagcagctgaaggt 1203 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| Sbjct: 1204 gctattgatgctgctaacatactaaaaccagctcttgcaagaggtgaactacagtgtatt 1263 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 || ||||||||| |||| || |||||||| ||||| || ||||| || | ||||||| || Sbjct: 1264 ggggccacaacattggacgaatacaggaagcatattgaaaaagacccagatttggagaga 1323 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaaga 304 | || || ||||| || || ||||| || ||||| || ||| | |||||||| | | | Sbjct: 1324 cgattccagccagttaaagtaccagaaccaactgtagatgaaaccatacaaatactgaaa 1383 Query: 305 ggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagtt 364 |||||| | || | ||||| |||| || ||||| || || || ||||| ||| | | Sbjct: 1384 ggacttagagaacgttatgagattcaccacaagctccgctatactgatgaggctcttata 1443 Query: 365 gctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctatt 424 ||||| ||||| | ||||| ||||||||||||||||| || |||||||||| ||||| Sbjct: 1444 gctgctgcgcaactttcgtaccagtatatcagtgatcgatttttgcctgacaaagctata 1503 Query: 425 gacttgattgatgaagc 441 || ||| |||||||||| Sbjct: 1504 gatttggttgatgaagc 1520
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 226 bits (114), Expect = 6e-56 Identities = 354/434 (81%) Strand = Plus / Plus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 ||||||||||||||||| || |||| ||||||||||| |||||||| || | || || Sbjct: 885 cgtggagagtttgaagagagagtgaaaaagcttatggaggaaattaaacagagcgacgag 944 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || || | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 945 atcatcttgtttatcgatgaagtgcacactttgattggagcaggagcagcagaaggtgca 1004 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggt 187 ||||| || |||||||| |||||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1005 attgacgcagctaacattttaaaacccgctctcgctagaggtgaattgcagtgcattgga 1064 Query: 188 gccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcgaagg 247 || |||||| | || || |||||||| || || |||||||| ||||| ||||| |||| Sbjct: 1065 gcgacaacattagacgaatacaggaagcacattgagaaagaccctgcattggaaagaaga 1124 Query: 248 tttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaagagga 307 || || ||||| || || || ||||| ||||| || ||| | || || ||| ||| || Sbjct: 1125 ttccagccagtgaaagtacctgagcctactgtggatgaaacgattcagatcctaaagggt 1184 Query: 308 cttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagttgct 367 || || ||| |||||||| ||||||||||||| || ||||| || || ||||||| || Sbjct: 1185 ctgcgagagcgatatgaaattcatcataagcttcgttacactgacgagtctttagtagca 1244 Query: 368 gcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctattgac 427 || || ||||| || || ||||||||||||||||| ||||| ||||||| ||| |||||| Sbjct: 1245 gctgcacagttgtcataccagtatatcagtgatcgtttcctacctgacagggcaattgac 1304 Query: 428 ttgattgatgaagc 441 ||||| |||||||| Sbjct: 1305 ttgatggatgaagc 1318
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | |||| Sbjct: 1153 taccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgat 1212 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| | || |||||||| |||||||| ||| Sbjct: 1213 gagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggt 1272 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || ||||| ||||||||||| ||||| ||||| | |||||||| ||||| ||||| ||| Sbjct: 1273 gctattgacgctgctaacattttaaagccagcattagcaagaggagaactacagtgtatt 1332 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaaga 228 || ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct: 1333 ggagccaccacacttgatgaatacaggaagcatattgagaaaga 1376 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 378 tatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatg 437 |||| ||||| || ||||||||||| ||||| || || || || ||||| |||||||||| Sbjct: 1526 tatcttatcaatacatcagtgatcgtttcctcccagataaagcaattgatttgattgatg 1585 Query: 438 aagcggggtcccgtgttaggct 459 |||| || || ||||| ||||| Sbjct: 1586 aagcaggttcacgtgtaaggct 1607
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||||||||| || ||||| |||||||||||||||| ||||| | ||||| |||| Sbjct: 72934 taccgtggagagttcgaggaaagattgaagaagcttatggaggaaatcaggcaaagtgat 72875 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || || ||||||||||||||||||||| | ||||| ||||| || ||||||||| Sbjct: 72874 gagataattctgtttattgatgaagtgcacacgctcatcggtgcaggagccgctgaaggt 72815 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcag 178 || || |||||||||||||||||||| |||||||| |||||||||||| ||||| Sbjct: 72814 gcgatcgatgctgctaacatcttaaagccagctctagcaagaggtgaattgcag 72761 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 177 agtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctt 236 |||| |||||||| |||||| | ||||||||||||||||| || |||||||||||||| | Sbjct: 72654 agtgtattggtgcaacaacaattgatgagtacaggaaacacattgagaaagatcctgcat 72595 Query: 237 tggag 241 ||||| Sbjct: 72594 tggag 72590 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtc 447 ||||||||| || || || ||||| || |||||||||||||||||||| ||||| Sbjct: 72336 cagtgatcggtttcttcccgacaaagcgattgacttgattgatgaagctgggtc 72283
>gb|AY108805.1| Zea mays PCO077883 mRNA sequence Length = 2049 Score = 137 bits (69), Expect = 4e-29 Identities = 187/225 (83%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 4 gtaccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatga 63 |||||||||||| || |||||||| | |||||||| ||||| ||||| ||||||| ||| Sbjct: 169 gtaccgtggagaattcgaagaaagattaaagaagctgatggaggaaataaagcaaagtga 228 Query: 64 tgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaagg 123 ||| || |||||||||||||||||||| ||||| |||| |||||||| ||||| | ||| Sbjct: 229 tgagataatactctttattgatgaagttcacactctgataggagcaggagcagc-ggagg 287 Query: 124 tgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcat 183 ||| || ||||||||||| ||||| || || || | || ||||||||| | |||||||| Sbjct: 288 tgctatagatgctgctaatatcttgaagcctgcgttggccagaggtgaattacagtgcat 347 Query: 184 tggtgccacaacactggatgagtacaggaaacatatcgagaaaga 228 ||| ||||| ||||| ||||| || ||||| || || |||||||| Sbjct: 348 tggagccactacactagatgaatataggaagcacattgagaaaga 392 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 383 tatcagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 ||||| |||||||||||||| || || || || ||||| |||||||||||||||||||| Sbjct: 547 tatcaatatatcagtgatcggtttctcccagataaggcaattgacttgattgatgaagca 606 Query: 443 gggtcccgtgttaggctcaggcatgcacag 472 || |||||||||||||| |||||||||| Sbjct: 607 ggttcccgtgttaggctacagcatgcacag 636
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| |||| || || ||||| ||||| || |||| ||| Sbjct: 38562 taccgtggagaatttgaagaaagattgaaaaaactaatggaggaaatcaaacaaagcgat 38503 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| || ||||||||||||||||| | || |||||||| ||||||||||| Sbjct: 38502 gaaataatacttttcattgatgaagtgcacactctaattggagcaggagcagctgaaggg 38443 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 ||||||||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 38442 gcaattgatgcggcaaacatattgaaaccagctcttgctagaggtgaact 38393 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 408 tgcctgacaaggctattgacttgattgatgaagcggggtcccg 450 |||||||||| ||||| || |||||||||||||| || ||||| Sbjct: 37625 tgcctgacaaagctatagatttgattgatgaagctggttcccg 37583
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | |||| Sbjct: 7097675 taccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgat 7097616 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| | || |||||||| |||||||| ||| Sbjct: 7097615 gagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggt 7097556 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || ||||| ||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 7097555 gctattgacgctgctaacattttaaagccagcattagcaagaggagaact 7097506 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtgt 453 ||||||||| ||||| || || || || ||||| |||||||||||||| || || ||||| Sbjct: 7096905 cagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgt 7096846 Query: 454 taggct 459 ||||| Sbjct: 7096845 aaggct 7096840
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | |||| Sbjct: 7097554 taccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgat 7097495 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| | || |||||||| |||||||| ||| Sbjct: 7097494 gagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggt 7097435 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || ||||| ||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 7097434 gctattgacgctgctaacattttaaagccagcattagcaagaggagaact 7097385 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtgt 453 ||||||||| ||||| || || || || ||||| |||||||||||||| || || ||||| Sbjct: 7096784 cagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgt 7096725 Query: 454 taggct 459 ||||| Sbjct: 7096724 aaggct 7096719
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | |||| Sbjct: 65361 taccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgat 65302 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| | || |||||||| |||||||| ||| Sbjct: 65301 gagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggt 65242 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || ||||| ||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 65241 gctattgacgctgctaacattttaaagccagcattagcaagaggagaact 65192 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtgt 453 ||||||||| ||||| || || || || ||||| |||||||||||||| || || ||||| Sbjct: 64591 cagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgt 64532 Query: 454 taggct 459 ||||| Sbjct: 64531 aaggct 64526
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 131 bits (66), Expect = 2e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | |||| Sbjct: 5975 taccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgat 5916 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| | || |||||||| |||||||| ||| Sbjct: 5915 gagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggt 5856 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || ||||| ||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 5855 gctattgacgctgctaacattttaaagccagcattagcaagaggagaact 5806 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtgt 453 ||||||||| ||||| || || || || ||||| |||||||||||||| || || ||||| Sbjct: 5205 cagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgt 5146 Query: 454 taggct 459 ||||| Sbjct: 5145 aaggct 5140
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 129 bits (65), Expect = 1e-26 Identities = 191/233 (81%) Strand = Plus / Plus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 ||||||||||||||||| || |||| ||||||||||| ||||||| || | ||||| Sbjct: 1197 cgtggagagtttgaagagagattgaaaaagcttatggaggaaattagacagagcgatgag 1256 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || || | ||||| || |||||||| || ||||| || || || ||||| ||||||||| Sbjct: 1257 ataatcttatttatcgacgaagtgcatactttgattggggctggagcagcagaaggtgca 1316 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggt 187 ||||| || |||||||| |||||||||||||| || ||||||||| ||||||||||||| Sbjct: 1317 attgacgcagctaacattttaaaaccagctctcgctagaggtgaattgcagtgcattgga 1376 Query: 188 gccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttgga 240 || |||||| | ||||| ||| | || || || |||||||| ||||| ||||| Sbjct: 1377 gcgacaacattagatgaataccgaaagcacattgagaaagaccctgccttgga 1429 Score = 95.6 bits (48), Expect = 1e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 318 gatatgaacttcatcataagctgcgatacacagatgatgctttagttgctgcagcgcagt 377 |||||||| |||| || ||||| || |||||||| || ||||||| || || || |||| Sbjct: 1507 gatatgaaattcaccacaagcttcgttacacagacgaatctttagtagcagctgcacagt 1566 Query: 378 tatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatg 437 | || || |||||||| |||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 1567 tgtcataccagtatataagtgatcgtttccttcctgacaaggcaattgacttgattgatg 1626 Query: 438 aagc 441 |||| Sbjct: 1627 aagc 1630
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 129 bits (65), Expect = 1e-26 Identities = 191/233 (81%) Strand = Plus / Plus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 ||||||||||||||||| || |||| ||||||||||| ||||||| || | ||||| Sbjct: 1172 cgtggagagtttgaagagagattgaaaaagcttatggaggaaattagacagagcgatgag 1231 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || || | ||||| || |||||||| || ||||| || || || ||||| ||||||||| Sbjct: 1232 ataatcttatttatcgacgaagtgcatactttgattggggctggagcagcagaaggtgca 1291 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggt 187 ||||| || |||||||| |||||||||||||| || ||||||||| ||||||||||||| Sbjct: 1292 attgacgcagctaacattttaaaaccagctctcgctagaggtgaattgcagtgcattgga 1351 Query: 188 gccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttgga 240 || |||||| | ||||| ||| | || || || |||||||| ||||| ||||| Sbjct: 1352 gcgacaacattagatgaataccgaaagcacattgagaaagaccctgccttgga 1404 Score = 95.6 bits (48), Expect = 1e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 318 gatatgaacttcatcataagctgcgatacacagatgatgctttagttgctgcagcgcagt 377 |||||||| |||| || ||||| || |||||||| || ||||||| || || || |||| Sbjct: 1482 gatatgaaattcaccacaagcttcgttacacagacgaatctttagtagcagctgcacagt 1541 Query: 378 tatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatg 437 | || || |||||||| |||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 1542 tgtcataccagtatataagtgatcgtttccttcctgacaaggcaattgacttgattgatg 1601 Query: 438 aagc 441 |||| Sbjct: 1602 aagc 1605
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 129 bits (65), Expect = 1e-26 Identities = 191/233 (81%) Strand = Plus / Plus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 ||||||||||||||||| || |||| ||||||||||| ||||||| || | ||||| Sbjct: 1145 cgtggagagtttgaagagagattgaaaaagcttatggaggaaattagacagagcgatgag 1204 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || || | ||||| || |||||||| || ||||| || || || ||||| ||||||||| Sbjct: 1205 ataatcttatttatcgacgaagtgcatactttgattggggctggagcagcagaaggtgca 1264 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggt 187 ||||| || |||||||| |||||||||||||| || ||||||||| ||||||||||||| Sbjct: 1265 attgacgcagctaacattttaaaaccagctctcgctagaggtgaattgcagtgcattgga 1324 Query: 188 gccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttgga 240 || |||||| | ||||| ||| | || || || |||||||| ||||| ||||| Sbjct: 1325 gcgacaacattagatgaataccgaaagcacattgagaaagaccctgccttgga 1377 Score = 95.6 bits (48), Expect = 1e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 318 gatatgaacttcatcataagctgcgatacacagatgatgctttagttgctgcagcgcagt 377 |||||||| |||| || ||||| || |||||||| || ||||||| || || || |||| Sbjct: 1455 gatatgaaattcaccacaagcttcgttacacagacgaatctttagtagcagctgcacagt 1514 Query: 378 tatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatg 437 | || || |||||||| |||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 1515 tgtcataccagtatataagtgatcgtttccttcctgacaaggcaattgacttgattgatg 1574 Query: 438 aagc 441 |||| Sbjct: 1575 aagc 1578
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||||||||| ||||| |||||||| || ||||| |||||||| |||| |||| Sbjct: 2895 taccgtggagagtttgaggaaagactgaagaaactaatggaggaaattaaacaaagtgat 2954 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| |||||||||||||| ||||| ||||| ||||| || || || || || Sbjct: 2955 gaaataatactgtttattgatgaagtacacacattgattggagctggagctgcagaggga 3014 Query: 125 gcaattgatgctgctaacatcttaaaacc 153 |||||||||||||| |||||||| ||||| Sbjct: 3015 gcaattgatgctgcaaacatcttgaaacc 3043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtgt 453 |||||| ||||| |||||||| || || |||||||||||||||||||| || |||||||| Sbjct: 3765 cagtgaccgctttctgcctgataaagcaattgacttgattgatgaagctggttcccgtgt 3824 Query: 454 t 454 | Sbjct: 3825 t 3825 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 176 cagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgct 235 ||||| ||||| |||||||| |||||||||||||| || || || |||||||| ||||| Sbjct: 3245 cagtgtattggagccacaaccctggatgagtacagaaagcacattgagaaagaccctgca 3304 Query: 236 ttggagcgaaggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaa 295 | ||| ||||||| || ||||| || || || || || |||| || ||| | ||||| Sbjct: 3305 ctagagagaaggttccagccagttaaagtccctgaaccttctgtggatgaaaccatacag 3364 Query: 296 atcttaagaggacttcgtgagagatatgaacttcatcataagct 339 ||||| | ||| ||||| ||||| ||||| ||||||| ||||| Sbjct: 3365 atcttgaaagggcttcgggagaggtatgagattcatcacaagct 3408
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 123 bits (62), Expect = 6e-25 Identities = 350/446 (78%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||| ||||| ||||| |||||||| | ||||| |||||||| |||| |||| Sbjct: 1179 taccgtggagaatttgaggaaagattgaagaagttgatggaggaaattaaacaaagtgat 1238 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || | |||||||||||||| || || ||||| || ||||| ||||| ||||| Sbjct: 1239 gaaataattttatttattgatgaagtacatactttgattggggcaggagcagcagaagga 1298 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || ||| ||| ||||| || |||||| | || ||| |||||| | ||||| ||| Sbjct: 1299 gccatcgatcgtgcaaacattttgaaaccacgttttcgaaggggtgaattacagtgtatt 1358 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 || || || || || ||||||||||| ||||| || ||||||||||| || | ||| || Sbjct: 1359 ggagctaccacccttgatgagtacagaaaacacattgagaaagatccagcacttgagaga 1418 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaaga 304 |||||||| || || || || || ||||| ||||| || ||| | ||||| ||||| | | Sbjct: 1419 aggtttcagcctgttaaagtgcccgagccaactgtagatgaaactatacagatcttgaaa 1478 Query: 305 ggacttcgtgagagatatgaacttcatcataagctgcgatacacagatgatgctttagtt 364 || |||||||| | ||||| | ||||| || || || ||||| ||||| || |||| Sbjct: 1479 gggcttcgtgaacgctatgagatccatcacaaacttcggtacacggatgaagcactagtg 1538 Query: 365 gctgcagcgcagttatcgtatcagtatatcagtgatcgcttcctgcctgacaaggctatt 424 |||||||| || | || || ||||| |||||||| || ||||||||||| || |||||| Sbjct: 1539 gctgcagcacaactctcttaccagtacatcagtgaccgtttcctgcctgataaagctatt 1598 Query: 425 gacttgattgatgaagcggggtcccg 450 ||| | || ||||||||||| ||||| Sbjct: 1599 gaccttatagatgaagcgggttcccg 1624
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 |||||||| ||||| || ||| |||||||||| ||||| ||||| || ||||| ||| || Sbjct: 66684 cgtggagaatttgaggagaggttgaagaagctaatggaggaaatcaaacaaaacgataat 66625 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || ||||| || ||||||||||| ||||| | || ||||| || ||||||||||| || Sbjct: 66624 ataatacttttcattgatgaagttcacacactaattggagctggagcagctgaaggggcg 66565 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 ||||||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct: 66564 attgatgctgcaaacatattaaaacccgctcttgccagaggggaact 66518 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 174 tgcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctg 233 ||||||| || || ||||||||||||||||| |||||||| || || || |||||||| | Sbjct: 65837 tgcagtgtataggagccacaacactggatgaatacaggaagcacattgaaaaagatccag 65778 Query: 234 ctttgga 240 ||||||| Sbjct: 65777 ctttgga 65771 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccg 450 ||||||||| || |||||||||| ||||| || |||||||||||||| || ||||| Sbjct: 65320 cagtgatcggtttttgcctgacaaagctatcgatttgattgatgaagctggttcccg 65264
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 115 bits (58), Expect = 1e-22 Identities = 142/170 (83%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 ||||||||||||||||| |||||||| || ||| | ||||| ||||||||||| | |||| Sbjct: 3062 taccgtggagagtttgaggaaaggctaaaaaagttgatggaggaaattaagcagagtgat 3121 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || ||||| ||||| |||||||||||||| ||||| ||||| || ||||| || || Sbjct: 3122 gaaataatactatttatcgatgaagtgcacacattgattggagctggagcagcagagggg 3181 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || || |||||||| |||||||| ||||| || || || |||||||||| Sbjct: 3182 gccatcgatgctgcaaacatcttgaaacctgccctagctcgaggtgaact 3231 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 194 acactggatgagtacaggaaacatatcgagaaagatcctgctttggagcgaaggtttcaa 253 ||||||||||| ||||| || ||||| |||||||||||||| | ||| | || || ||| Sbjct: 3460 acactggatgaatacagaaagcatattgagaaagatcctgcactagagaggagattccaa 3519 Query: 254 ccagtcaaggttccagagcccactgttgaagaatcaatacaaatcttaagaggacttcgt 313 ||||| ||||| || || || |||||||| ||| | ||||| || | | ||| |||||| Sbjct: 3520 ccagttaaggtccctgaacctactgttgatgaaactatacagattctgaaagggcttcgt 3579 Query: 314 gagagatatgaacttcatca 333 ||||| |||||| ||||||| Sbjct: 3580 gagaggtatgaaattcatca 3599 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 393 tcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgtg 452 ||||||| || || ||||||||||| || ||||| |||||||||||||| || || |||| Sbjct: 3974 tcagtgaccgatttctgcctgacaaagcaattgatttgattgatgaagctggttctcgtg 4033 Query: 453 tt 454 || Sbjct: 4034 tt 4035
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 101 bits (51), Expect = 2e-18 Identities = 141/171 (82%) Strand = Plus / Minus Query: 8 cgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgatgat 67 ||||||||||||||||| || |||| ||||||||||| ||||||| || | ||||| Sbjct: 20299 cgtggagagtttgaagagagattgaaaaagcttatggaggaaattagacagagcgatgag 20240 Query: 68 attatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgca 127 || || | ||||| || |||||||| || ||||| || || || ||||| ||||||||| Sbjct: 20239 ataatcttatttatcgacgaagtgcatactttgattggggctggagcagcagaaggtgca 20180 Query: 128 attgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcag 178 ||||| || |||||||| |||||||||||||| || ||||||||| ||||| Sbjct: 20179 attgacgcagctaacattttaaaaccagctctcgctagaggtgaattgcag 20129 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 394 cagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 19731 cagtgatcgtttccttcctgacaaggcaattgacttgattgatgaagc 19684
>ref|NM_114414.1| Arabidopsis thaliana ATP binding / protein binding AT3G45450 mRNA, complete cds Length = 1026 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 55 gcaaaatgatgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgc 114 ||||| |||||| || || || |||||||||||| ||||| | | ||||| ||||| || Sbjct: 711 gcaaagtgatgacataattctgtttattgatgaaatgcacttgctcatcggtgcaggagc 770 Query: 115 agctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 | ||||||||| || ||||||||||||||||||||||||||||| | |||| ||||| | Sbjct: 771 cgttgaaggtgcgatagatgctgctaacatcttaaaaccagctctagaaagatgtgaatt 830 Query: 175 gcagt 179 ||||| Sbjct: 831 gcagt 835
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 87.7 bits (44), Expect = 3e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 55 gcaaaatgatgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgc 114 ||||| |||||| || || || |||||||||||| ||||| | | ||||| ||||| || Sbjct: 16939 gcaaagtgatgacataattctgtttattgatgaaatgcacttgctcatcggtgcaggagc 16998 Query: 115 agctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 | ||||||||| || ||||||||||||||||||||||||||||| | |||| ||||| | Sbjct: 16999 cgttgaaggtgcgatagatgctgctaacatcttaaaaccagctctagaaagatgtgaatt 17058 Query: 175 gcag 178 |||| Sbjct: 17059 gcag 17062 Score = 44.1 bits (22), Expect = 0.45 Identities = 70/86 (81%) Strand = Plus / Plus Query: 201 atgagtacaggaaacatatcgagaaagatcctgctttggagcgaaggtttcaaccagtca 260 ||||||||||||| || || ||||| |||||||| |||||| || |||| || || || | Sbjct: 17173 atgagtacaggaagcacattgagaatgatcctgcattggagagacggttccagcctgtga 17232 Query: 261 aggttccagagcccactgttgaagaa 286 |||| || || || ||||| |||||| Sbjct: 17233 aggtacctgaaccaactgtagaagaa 17258
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 110 ggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggt 169 ||||| |||||||| || ||||||||| |||||||||||||||||||||| ||| | || Sbjct: 755905 ggtgctgctgaaggagctattgatgcttctaacatcttaaaaccagctctagcacgtgga 755964 Query: 170 gaactgcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagat 229 ||| | ||||| ||||| ||||||||| | ||||| ||| | || ||||| || |||||| Sbjct: 755965 gaaattcagtgtattggagccacaacaattgatgaataccgcaagcatattgaaaaagat 756024 Query: 230 cctgcttt 237 ||||||| Sbjct: 756025 gctgcttt 756032
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 83.8 bits (42), Expect = 5e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 78 ttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctg 137 ||||||||||||| || || ||||| || |||||||| ||||| || |||||||| |||| Sbjct: 601226 ttattgatgaagttcatacattgataggcgcaggtgctgctgagggagcaattgacgctg 601285 Query: 138 ctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggtgccacaacac 197 | ||||| |||||||| || || |||||||| ||||| || || ||||| || ||||| | Sbjct: 601286 caaacattttaaaacctgccctagcaagaggagaacttcaatgtattggagctacaactc 601345 Query: 198 tggatgagtacaggaaacatatcgagaaagatcctgctttggagcgaaggtttcaacc 255 | ||||| || | |||||||| || | |||| |||| || |||||||| || ||||| Sbjct: 601346 ttgatgaatatcgcaaacatattgaaagagatgctgcattagagcgaagattccaacc 601403
>dbj|AK069552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N03, full insert sequence Length = 3226 Score = 83.8 bits (42), Expect = 5e-13 Identities = 219/278 (78%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 1216 taccgtggtgagtttgaggagagattgaagaagctgatggacgaagtgaagcagaatggt 1275 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 1276 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 1335 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || || ||||| |||||| | || ||||| || |||||||||||||| ||||| ||| Sbjct: 1336 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaactacagtgtatt 1395 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 || ||||| || | ||||| ||||| || || || |||||||| || || ||||| | Sbjct: 1396 ggagccactaccattgatgaatacagaaagcacattgagaaagacccagcactggagagg 1455 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttga 282 | ||||| || |||||||| || ||||| |||||||| Sbjct: 1456 cgttttcagcctgtcaaggtccctgagccaactgttga 1493 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 386 cagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcgggg 445 ||||| ||||||||||| ||||| || || || || ||||||||| |||||||||| || Sbjct: 1597 cagtacatcagtgatcgtttcctcccggataaagcaattgacttggttgatgaagcaggt 1656 Query: 446 tcccgtgttaggctcaggcatgcacagctacctgatga 483 || | ||| ||||| | |||| |||||||||||||| Sbjct: 1657 tctcttgtcaggctgcgaaatgcccagctacctgatga 1694
>dbj|AK100126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008I20, full insert sequence Length = 3229 Score = 75.8 bits (38), Expect = 1e-10 Identities = 218/278 (78%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| ||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 1224 taccgtggtgagtttggggagagattgaagaagctgatggacgaagtgaagcagaatggt 1283 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 1284 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 1343 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcatt 184 || || || ||||| |||||| | || ||||| || |||||||||||||| ||||| ||| Sbjct: 1344 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaactacagtgtatt 1403 Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcga 244 || ||||| || | ||||| ||||| || || || |||||||| || || ||||| | Sbjct: 1404 ggagccactaccattgatgaatacagaaagcacattgagaaagacccagcactggagagg 1463 Query: 245 aggtttcaaccagtcaaggttccagagcccactgttga 282 | ||||| || |||||||| || ||||| |||||||| Sbjct: 1464 cgttttcagcctgtcaaggtccctgagccaactgttga 1501 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 386 cagtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcgggg 445 ||||| ||||||||||| ||||| || || || || ||||||||| |||||||||| || Sbjct: 1605 cagtacatcagtgatcgtttcctcccggataaagcaattgacttggttgatgaagcaggt 1664 Query: 446 tcccgtgttaggctcaggcatgcacagctacctgatga 483 || | ||| ||||| | |||| |||||||||||||| Sbjct: 1665 tctcttgtcaggctgcgaaatgcccagctacctgatga 1702
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 398 gatcgcttcctgcctgacaaggctattgacttgattgatgaagcgg 443 ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 2104940 gatcgcttcctaccggataaggctattgacttgattgatgaagcgg 2104895 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgct 136 |||||||||||| | || || || || || ||||| || || ||||| || ||||||||| Sbjct: 2105261 tttattgatgaaatccataccttaattggggcaggggctgccgaaggggcgattgatgct 2105202 Query: 137 gctaacatcttaaaacc 153 || || ||||||||||| Sbjct: 2105201 gccaatatcttaaaacc 2105185
>gb|AC138005.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038O16, complete sequence Length = 37350 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 8646 taccgtggtgagtttgaggagagattgaagaagctgatggacgaagtgaagcagaatggt 8587 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 8586 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 8527 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || || || ||||| |||||| | || ||||| || |||||||||||||| Sbjct: 8526 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaact 8477
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 106030 taccgtggtgagtttgaggagagattgaagaagctgatggacgaagtgaagcagaatggt 105971 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 105970 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 105911 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || || || ||||| |||||| | || ||||| || |||||||||||||| Sbjct: 105910 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaact 105861
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 9097456 taccgtggtgagtttgaggagagattgaagaagctgatggacgaagtgaagcagaatggt 9097397 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 9097396 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 9097337 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || || || ||||| |||||| | || ||||| || |||||||||||||| Sbjct: 9097336 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaact 9097287 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 114 cagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaac 173 |||| |||||||| |||||||||||||| || || || ||||| || ||||||||||||| Sbjct: 9200767 cagcagaaggtgctattgatgctgctaatatttttaagccagcactggcaagaggtgaac 9200708 Query: 174 t 174 | Sbjct: 9200707 t 9200707 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 caaaatgatgatattatactctttat 81 |||||||||||||||||||| ||||| Sbjct: 4271874 caaaatgatgatattatactgtttat 4271899 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 175 gcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgc 234 |||||| ||||| ||||| ||| | |||| |||||||| || |||||||||||| |||| Sbjct: 9200551 gcagtgtattggagccactacaattaatgaatacaggaagcacatcgagaaagatgctgc 9200492
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 5 taccgtggagagtttgaagaaaggctgaagaagcttatggaagaaattaagcaaaatgat 64 |||||||| |||||||| || || |||||||||| ||||| ||| | ||||| |||| | Sbjct: 9169153 taccgtggtgagtttgaggagagattgaagaagctgatggacgaagtgaagcagaatggt 9169094 Query: 65 gatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggt 124 || || || ||||| |||||||||| ||||| || | || || || ||||||||||| Sbjct: 9169093 gagataattctcttccttgatgaagttcacaccctggtgggtgctggagcagctgaaggg 9169034 Query: 125 gcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaact 174 || || || ||||| |||||| | || ||||| || |||||||||||||| Sbjct: 9169033 gccatcgacgctgccaacatcctgaagccagcgctagcaagaggtgaact 9168984 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 114 cagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaac 173 |||| |||||||| |||||||||||||| || || || ||||| || ||||||||||||| Sbjct: 9272464 cagcagaaggtgctattgatgctgctaatatttttaagccagcactggcaagaggtgaac 9272405 Query: 174 t 174 | Sbjct: 9272404 t 9272404 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 caaaatgatgatattatactctttat 81 |||||||||||||||||||| ||||| Sbjct: 4280568 caaaatgatgatattatactgtttat 4280593 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 175 gcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgc 234 |||||| ||||| ||||| ||| | |||| |||||||| || |||||||||||| |||| Sbjct: 9272248 gcagtgtattggagccactacaattaatgaatacaggaagcacatcgagaaagatgctgc 9272189
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 116 gctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactg 175 ||||||||||| |||||||| || |||||| | || |||||| | ||| | ||||| ||| Sbjct: 1363312 gctgaaggtgcgattgatgcggccaacatcctcaagccagctttggcacggggtgagctg 1363371 Query: 176 cagtgcattggtgccacaacactggatga 204 |||||||| ||||| || ||||||||||| Sbjct: 1363372 cagtgcatcggtgcaaccacactggatga 1363400 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 392 atcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggg 444 ||||| ||||||||||| || |||||||| || ||||| || || |||||||| Sbjct: 1363588 atcagcgatcgcttcctacccgacaaggcgatcgacttaatcgacgaagcggg 1363640
>gb|U16134.1|SSU16134 Synechococcus sp. Clp protease putative regulatory subunit (clpC) gene, complete cds Length = 2935 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 116 gctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactg 175 ||||||||||| |||||||| || |||||| | || |||||| | ||| | ||||| ||| Sbjct: 1208 gctgaaggtgcgattgatgcggccaacatcctcaagccagctttggcacggggtgagctg 1267 Query: 176 cagtgcattggtgccacaacactggatga 204 |||||||| ||||| || ||||||||||| Sbjct: 1268 cagtgcatcggtgcaaccacactggatga 1296
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 116 gctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactg 175 ||||||||||| |||||||| || |||||| | || |||||| | ||| | ||||| ||| Sbjct: 257571 gctgaaggtgcgattgatgcggccaacatcctcaagccagctttggcacggggtgagctg 257512 Query: 176 cagtgcattggtgccacaacactggatga 204 |||||||| ||||| || ||||||||||| Sbjct: 257511 cagtgcatcggtgcaaccacactggatga 257483 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 392 atcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggg 444 ||||| ||||||||||| || |||||||| || ||||| || || |||||||| Sbjct: 257295 atcagcgatcgcttcctacccgacaaggcgatcgacttaatcgacgaagcggg 257243
>emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11 Length = 317050 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 388 gtatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcgg 443 ||||||||||||||| ||| ||||||| ||||| ||||||||||| ||||| |||| Sbjct: 270596 gtatatcagtgatcgtttcttgcctgataaggccattgacttgatggatgaggcgg 270651
>gb|AE013175.1| Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome Length = 10177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 116 gctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactg 175 |||||||||||||| |||||| | ||||||||||| || ||||| |||||||| ||| | Sbjct: 1661 gctgaaggtgcaatagatgcttccaacatcttaaagcctgctctggcaagaggagaaatt 1602 Query: 176 cagtgcattggtgccacaacactggatgagtacag 210 ||| |||||||| || ||| ||||||| ||||| Sbjct: 1601 caggtaattggtgctaccacattggatgaatacag 1567
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 ggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggt 169 ||||| || |||||||| ||||||||||| || ||||||||||| || | ||||||||| Sbjct: 146467 ggtgctgcagaaggtgccattgatgctgccaatatcttaaaacctgccttagcaagaggt 146526 Query: 170 gaactgcagtgcattggtgccac 192 ||| | || || ||||||||||| Sbjct: 146527 gaattacaatgtattggtgccac 146549
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 110 ggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggt 169 ||||| || |||||||| ||||||||||| || ||||||||||| || | ||||||||| Sbjct: 68884 ggtgctgcagaaggtgccattgatgctgccaatatcttaaaacctgccttagcaagaggt 68825 Query: 170 gaactgcagtgcattggtgccac 192 ||| | || || ||||||||||| Sbjct: 68824 gaattacaatgtattggtgccac 68802
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 60.0 bits (30), Expect = 8e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 86 gaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctgctaacatc 145 ||||| ||||| ||||| || |||||||| ||||| ||||| || || || || |||||| Sbjct: 1354662 gaagttcacaccttgattggtgcaggtgccgctgagggtgccatcgacgccgccaacatc 1354603 Query: 146 ttaaaaccagctcttgcaagaggtgaactgcagtgcattggtgccacaacactggatgag 205 | || || || || || |||| ||| |||| ||||| |||||||| || || |||||| Sbjct: 1354602 cttaagccggcactcgctcgaggcgaattgcaatgcatcggtgccacgaccctcgatgag 1354543 Query: 206 tacaggaaacatatcgag 223 ||||| |||||||||||| Sbjct: 1354542 tacagaaaacatatcgag 1354525 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 392 atcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcgg 443 ||||||||||||| |||| || ||||| ||||| ||||| |||||||||| Sbjct: 2059843 atcagtgatcgctgtttgcccgataaggccattgatttgatcgatgaagcgg 2059792 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 165 gaggtgaactgcagtgcattggtgccacaacactggatga 204 |||||||| ||| ||||| ||||||||||| |||||||| Sbjct: 901366 gaggtgaattgcgttgcatcggtgccacaaccctggatga 901327
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7 Length = 346683 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 83 gatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctgctaac 142 |||||||||||||| | || || ||||| || || |||||||| || ||||| || ||| Sbjct: 96219 gatgaagtgcacacactcattggggcaggcgctgcagaaggtgccatcgatgccgccaac 96278 Query: 143 atcttaaaaccagctcttgcaagaggtgaactgcagtgcattggtgccac 192 || | |||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 96279 attctcaaaccagcactagctagaggagaactgcagtgcataggtgccac 96328 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 397 tgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||||||||| || ||||| || ||||| || |||||||| Sbjct: 96533 tgatcgcttcctgccggataaggccatcgacttaatcgatgaagc 96577
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 114 cagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaac 173 |||| |||||||| |||||||||||||| || || || ||||| || ||||||||||||| Sbjct: 83253 cagcagaaggtgctattgatgctgctaatatttttaagccagcactggcaagaggtgaac 83312 Query: 174 t 174 | Sbjct: 83313 t 83313 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 175 gcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgc 234 |||||| ||||| ||||| ||| | |||| |||||||| || |||||||||||| |||| Sbjct: 83469 gcagtgtattggagccactacaattaatgaatacaggaagcacatcgagaaagatgctgc 83528
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 408 tgcctgacaaggctattgacttgattgatgaagcggg 444 ||||||||||||| |||||| |||||||||||||||| Sbjct: 3811840 tgcctgacaaggccattgacgtgattgatgaagcggg 3811804
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 149 aaaccagctcttgcaagaggtgaactgcagtgcattggtgccacaacactggatgagta 207 |||||||| ||||| | ||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1955270 aaaccagcccttgcgcgtggtgagttgcagtgcattggagccacaacacttgatgagta 1955212
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 78 ttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctg 137 |||| |||||||| || || || || || ||||| || |||||||| ||||||||||||| Sbjct: 334996 ttatcgatgaagttcatactttaataggtgcaggagctgctgaaggagcaattgatgctg 334937 Query: 138 ctaacatcttaaaaccagc 156 | || || ||||||||||| Sbjct: 334936 ccaatatattaaaaccagc 334918
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 173 ctgcagtgcattggtgccacaacactggatgagta 207 ||||||||||| ||||||||||| ||||||||||| Sbjct: 200813 ctgcagtgcatcggtgccacaaccctggatgagta 200847
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 |||||||| || |||||||| |||||||||||||| | || ||||| ||| ||||| || Sbjct: 4569902 tgcattggagcaacaacactagatgagtacaggaagtacattgagaaggatgctgctctg 4569843 Query: 239 gagcgaaggtt 249 ||||| ||||| Sbjct: 4569842 gagcgtaggtt 4569832
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 |||||||| || |||||||| |||||||||||||| | || ||||| ||| ||||| || Sbjct: 105281 tgcattggagcaacaacactagatgagtacaggaagtacattgagaaggatgctgctctg 105222 Query: 239 gagcgaaggtt 249 ||||| ||||| Sbjct: 105221 gagcgtaggtt 105211
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 134 gctgctaacatcttaaaaccagctcttgcaagaggtgaa 172 ||||||||||| || ||||||||||||||||| |||||| Sbjct: 1920630 gctgctaacattttgaaaccagctcttgcaagcggtgaa 1920592 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 56 caaaatgatgatattatactctttattgatgaa 88 |||||||||||||| || ||||||||||||||| Sbjct: 625443 caaaatgatgatatcatcctctttattgatgaa 625411
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 107 gcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaaga 166 ||||||| ||||||||||||||||||||| | || || |||||||| | ||||| ||| Sbjct: 3329028 gcaggtggagctgaaggtgcaattgatgcatcaaatattttaaaaccttcacttgctaga 3328969 Query: 167 ggtgaactgcagtgcattggtgc 189 || ||| | ||||| |||||||| Sbjct: 3328968 ggagaaattcagtgtattggtgc 3328946
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 52.0 bits (26), Expect = 0.002 Identities = 101/126 (80%) Strand = Plus / Plus Query: 104 ggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgca 163 |||||||| ||||||||||| || || ||||| |||||| | ||||| ||||| | || Sbjct: 56135 ggagcaggagcagctgaaggagctatcgatgcggctaacctattaaagccagcattagct 56194 Query: 164 agaggtgaactgcagtgcattggtgccacaacactggatgagtacaggaaacatatcgag 223 ||||| ||| |||| || || || || ||||||||||| || || | |||||||| ||| Sbjct: 56195 agaggagaattgcaatgtataggcgcgacaacactggaagaatatcgtaaacatatagag 56254 Query: 224 aaagat 229 |||||| Sbjct: 56255 aaagat 56260
>gb|AY320376.1| Lactobacillus johnsonii strain NCC533 prophage flanking region Length = 8992 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 81 ttgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctgcta 140 |||||||| |||| || ||||| || ||||||| || |||||||||||||||||| | | Sbjct: 857 ttgatgaaatgcatactttgattggtgcaggtggcgcggaaggtgcaattgatgcttcaa 916 Query: 141 acatcttaaa 150 | |||||||| Sbjct: 917 atatcttaaa 926
>gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 of the complete genome Length = 300380 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 104 ggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaacc 153 |||||||| |||||||||||||| || |||||| | ||||| |||||||| Sbjct: 179381 ggagcaggagcagctgaaggtgctatcgatgcttcaaacattttaaaacc 179430
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 39 ttatggaagaaattaagcaaaatgatgatattatactctttattgatgaagtgcacacgt 98 ||||||| ||||| ||| |||||| || || |||| |||||||||||| |||| || Sbjct: 1806683 ttatggatgaaatcaagaaaaatggaaatgttttactgtttattgatgaattgcatacaa 1806624 Query: 99 tgatcggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctc 158 | | || |||||||| |||||||| || || |||||| | || |||||||||||||||| Sbjct: 1806623 ttgttggcgcaggtgctgctgaaggagctatagatgcttcaaatatcttaaaaccagctc 1806564 Query: 159 tt 160 || Sbjct: 1806563 tt 1806562 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 4 gtaccgtggagagtttgaagaaaggctgaa 33 |||||| ||||| ||||||||||||||||| Sbjct: 885079 gtaccgaggagaatttgaagaaaggctgaa 885050
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 138 ctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggtgccacaacac 197 ||||||| || ||||||| |||||| | |||||||| | || |||||||| ||||| | Sbjct: 235350 ctaacatattgaaaccagttcttgcgcggggtgaactacgctgtattggtgcaacaactc 235291 Query: 198 tggatgagtacaggaaacatatcgagaaagatcctgct 235 | |||||||| || ||||||| || |||||||||||| Sbjct: 235290 tagatgagtatagagaacatatagaaaaagatcctgct 235253 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 410 cctgacaaggctattgacttgattgatgaagc 441 ||||||||||| |||||||| || |||||||| Sbjct: 235078 cctgacaaggcaattgacttaatagatgaagc 235047
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 104 ggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaacc 153 |||||||| |||||||||||||| || |||||| | ||||| |||||||| Sbjct: 358453 ggagcaggagcagctgaaggtgctatcgatgcttcaaacattttaaaacc 358404
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 98 ttgatcggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagct 157 ||||| |||||||| || || ||||| || || || ||||| ||||| ||||||||||| Sbjct: 87104 ttgataggagcaggggctgccgaaggagctatagacgctgcaaacattttaaaaccagca 87163 Query: 158 cttgcaagaggtgaactgcagtgcattggtgccacaacactggatgagtacaggaaacat 217 | || |||||||| || || ||||| || || || || ||||| || ||||| || ||| Sbjct: 87164 ttagcgagaggtgagcttcaatgcataggagcaactaccctggaagaatacagaaagcat 87223 Query: 218 atcgagaaagatcctgctttggagcgaaggtttcaacc 255 || ||||||||| |||| | ||| |||| |||||||| Sbjct: 87224 atagagaaagatgctgcactcgagagaagatttcaacc 87261
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 104 ggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaacc 153 |||||||| |||||||||||||| || |||||| | ||||| |||||||| Sbjct: 482743 ggagcaggagcagctgaaggtgctatcgatgcttcaaacattttaaaacc 482792
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 173 ctgcagtgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcct 232 |||| ||||||||| ||||| ||| ||||||| ||| | ||| | ||||| ||||||||| Sbjct: 2195338 ctgcggtgcattggggccaccacattggatgaataccgcaaaaacatcgaaaaagatcct 2195397 Query: 233 gctttggagcgaaggtttcaac 254 ||||| || |||| ||||||| Sbjct: 2195398 gctttagaaagaagatttcaac 2195419
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgct 136 ||||||||||| |||| || || ||||| ||||||| ||| |||||||| ||||||||| Sbjct: 135747 tttattgatgagctgcatacattaatcggtgcaggtggagcggaaggtgccattgatgct 135806 Query: 137 gctaacatcttaaa 150 | ||||| ||||| Sbjct: 135807 tccaacattttaaa 135820
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 104 ggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaacc 153 |||||||| |||||||||||||| || |||||| | ||||| |||||||| Sbjct: 482453 ggagcaggagcagctgaaggtgctatcgatgcttcaaacattttaaaacc 482502
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 66 atattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtg 125 ||||||| || |||||||||||| | || || || ||||| ||||||| ||| ||||||| Sbjct: 96007 atattattctatttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtg 96066 Query: 126 caattgatgc 135 |||| ||||| Sbjct: 96067 caatcgatgc 96076
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 81 ttgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgctgcta 140 |||||||| |||| || ||||| || ||||||| || |||||||||||||||||| | | Sbjct: 368999 ttgatgaaatgcatactttgattggtgcaggtggcgcggaaggtgcaattgatgcttcaa 369058 Query: 141 acatcttaaa 150 | |||||||| Sbjct: 369059 atatcttaaa 369068
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgatgct 136 |||||||||||| |||| || || || || || |||| ||| |||||||| |||||||| Sbjct: 256678 tttattgatgaattgcataccttaattggtgctggtggagcggaaggtgcgattgatgcc 256737 Query: 137 gctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgcattggtgccacaaca 196 | || ||||| || || |||| || | ||||| |||| || |||||||| |||||| Sbjct: 256738 tcgaatatcttgaagccgcctctagctcgtggtgagttgcaatgtattggtgcaacaaca 256797 Query: 197 ctggatgagtacaggaaacatatcgagaaagatcctgc 234 |||||||||||| | ||| |||| || |||||| |||| Sbjct: 256798 ctggatgagtaccgtaaatatattgaaaaagatgctgc 256835 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ctctttattgatgaagtgca 93 |||||||||||||||||||| Sbjct: 1029060 ctctttattgatgaagtgca 1029041
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 146 ttaaaaccagctcttgcaagaggtgaact 174 |||||||| |||||||||||||||||||| Sbjct: 554765 ttaaaacctgctcttgcaagaggtgaact 554737
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 397 tgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1497449 tgatcgcttcctgcccgacaaggccatcgatttgatcgatgaagc 1497405
>emb|Y13333.1|CJY13333 Campylobacter jejuni clpB gene Length = 3315 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 146 ttaaaaccagctcttgcaagaggtgaact 174 |||||||| |||||||||||||||||||| Sbjct: 1282 ttaaaacctgctcttgcaagaggtgaact 1310
>emb|AL139075.2|CJ11168X2 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 2/6 Length = 308601 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 146 ttaaaaccagctcttgcaagaggtgaact 174 |||||||| |||||||||||||||||||| Sbjct: 162242 ttaaaacctgctcttgcaagaggtgaact 162214
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 182 attggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggag 241 |||||||| |||||| |||||||||| || || |||| || ||||||||||| || ||| Sbjct: 156485 attggtgctacaacattggatgagtatagaaagtatatagaaaaagatcctgcattagag 156544 Query: 242 cgaaggtttcaaccagt 258 || | ||||||||||| Sbjct: 156545 agacgttttcaaccagt 156561
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 1007279 cgcttcctgcccgacaaggcgattgatttgattgacgaagc 1007319
>emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment 12/24 Length = 304850 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 406 cctgcctgacaaggctattgacttgattgatgaagc 441 |||||||||||||||||| ||| |||| |||||||| Sbjct: 255825 cctgcctgacaaggctatcgacgtgatcgatgaagc 255860
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 48.1 bits (24), Expect = 0.029 Identities = 87/108 (80%) Strand = Plus / Plus Query: 101 atcggagcaggtgcagctgaaggtgcaattgatgctgctaacatcttaaaaccagctctt 160 ||||| |||||||| || |||||||| |||||||| || || ||| | || ||||| | Sbjct: 3643241 atcggtgcaggtgctgccgaaggtgcgattgatgcggcaaatatcctcaagccagccttg 3643300 Query: 161 gcaagaggtgaactgcagtgcattggtgccacaacactggatgagtac 208 |||||||||||| |||| || || ||||| ||||| | ||||||||| Sbjct: 3643301 gcaagaggtgaattgcaatgtatcggtgcgacaaccttagatgagtac 3643348 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 389 tatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||| || |||||||||||||| || || || || ||||| ||||||||||| Sbjct: 2345548 tatattagcgatcgcttcctgcccgataaagccatagacttaattgatgaagc 2345600
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 389 tatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaag 440 ||||||| ||||||| ||||| || |||||||||||| |||||||||||| Sbjct: 406495 tatatcaatgatcgcaagctgccggataaggctattgacgtgattgatgaag 406546
>ref|NM_121549.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G15450 mRNA, complete cds Length = 2999 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 200 gatgagtacaggaaacatatcgagaaagatcctgctttggagcgaaggtttcaac 254 ||||| || |||||| | || ||||||||||| || |||||||| |||||||||| Sbjct: 1269 gatgaatataggaaatacatagagaaagatccagccttggagcgtaggtttcaac 1323
>ref|XM_468773.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3546 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 1420 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 1478
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 17649034 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 17649092 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gaagaaattaagcaaaatgatgat 67 |||||| ||||||||||||||||| Sbjct: 4834726 gaagaatttaagcaaaatgatgat 4834703
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 6043 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 5985
>gb|AY450635.1| Solanum tuberosum clone plbr8 ATP-dependent CLP protease mRNA, partial cds Length = 669 Score = 46.1 bits (23), Expect = 0.11 Identities = 53/63 (84%) Strand = Plus / Plus Query: 392 atcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagcggggtcccgt 451 |||||||| || || |||||||| || || ||||| |||||||||||||| || || ||| Sbjct: 1 atcagtgaccgatttctgcctgataaagcaattgatttgattgatgaagctggttctcgt 60 Query: 452 gtt 454 ||| Sbjct: 61 gtt 63
>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete sequence Length = 136916 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 134973 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 134915
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcgg 443 ||||||||||| |||||||| || |||||||| ||||| |||| Sbjct: 2347584 cgcttcctgccagacaaggcaatcgacttgatcgatgaggcgg 2347542
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 200 gatgagtacaggaaacatatcgagaaagatcctgctttggagcgaaggtttcaac 254 ||||| || |||||| | || ||||||||||| || |||||||| |||||||||| Sbjct: 22339 gatgaatataggaaatacatagagaaagatccagccttggagcgtaggtttcaac 22285
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 407 ctgcctgacaaggctattgacttgattgatgaagc 441 |||||||||||||||||||| | ||||||||||| Sbjct: 985420 ctgcctgacaaggctattgatcttattgatgaagc 985454
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 17642575 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 17642633 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gaagaaattaagcaaaatgatgat 67 |||||| ||||||||||||||||| Sbjct: 4834841 gaagaatttaagcaaaatgatgat 4834818
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 174 tgcagtgcattggtgccacaacactggatgagtac 208 ||||||||||||||||||| || ||||||||||| Sbjct: 292272 tgcagtgcattggtgccactactttggatgagtac 292238 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ctctttattgatgaagtgcacacg 97 ||||||||||||||| |||||||| Sbjct: 2567643 ctctttattgatgaactgcacacg 2567620
>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full insert sequence Length = 3303 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 185 ggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggagcg 243 ||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||||||| Sbjct: 1420 ggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcg 1478
>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence Length = 150968 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 144806 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 144847
>gb|AE008449.1| Streptococcus pneumoniae R6 section 65 of 184 of the complete genome Length = 11727 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 398 gatcgcttcctgcctgacaaggctattgac 427 ||||||||| ||||||||||||| |||||| Sbjct: 3932 gatcgcttcttgcctgacaaggccattgac 3903
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 caaaatgatgatattatactctttat 81 |||||||||||||||||||| ||||| Sbjct: 53384 caaaatgatgatattatactgtttat 53409
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 1730 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 1771
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 1085604 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 1085645
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 taaaaccagctcttgcaagagg 168 |||||||||||||||||||||| Sbjct: 490505 taaaaccagctcttgcaagagg 490484
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 ||||||||||| || ||||| |||||| | |||||||||||| Sbjct: 510565 cgcttcctgccggataaggcgattgacctcattgatgaagcg 510606
>ref|XM_946645.1| Trypanosoma brucei TREU927 ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100) (Tb927.2.5980) partial mRNA Length = 2613 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 1147 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 1188
>ref|XM_842698.1| Leishmania major strain Friedlin serine peptidase (LMJ_0768) partial mRNA Length = 2604 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 ||||||||||| || ||||| |||||| | |||||||||||| Sbjct: 1147 cgcttcctgccggataaggcgattgacctcattgatgaagcg 1188
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 aaggctattgacttgattgatgaagc 441 ||||| |||||||||||||||||||| Sbjct: 996110 aaggcgattgacttgattgatgaagc 996135
>emb|Z94053.1|LDHSP100 L.donovani hsp100 gene Length = 7726 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 ||||| ||||| || |||||||||||| | |||||||||||| Sbjct: 3592 cgctttctgccggataaggctattgaccttattgatgaagcg 3633
>emb|Z38058.1|LMCLPB L.major (MHOM/SU/5ASKH) DNA for 100 kDa heat shock protein (Hsp100) Length = 5997 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 ||||||||||| || ||||| |||||| | |||||||||||| Sbjct: 3318 cgcttcctgccggataaggcgattgacctcattgatgaagcg 3359
>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 9/10 Length = 349115 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ggtgaactgcagtgcattggtgccacaacactggatgagtac 208 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 25663 ggtgaactgcagaccattggtgcaaccaccctggatgagtac 25622
>emb|AJ250726.2|TBR250726 Trypanosoma brucei HSP100 gene, GPI-PLC gene, beta prime COP gene, RPL44 gene, ORF1 (partial), ORF2, ORF3, ORF4, ORF5, ORF6 and ORF7 (partial), shorter allele Length = 24181 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 6580 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 6621
>emb|AJ000080.1|TCAJ80 Trypanosoma brucei hsp100 and gpi-plc genes Length = 7000 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 1189 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 1230
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 ttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||| ||||||||||| |||||| |||| |||||||| Sbjct: 1461567 ttcctccctgacaaggcgattgacctgatcgatgaagc 1461530
>gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei 23S rRNA pseudouridine synthase (rluD) gene, partial cds; hypothetical protein YfiH (yfiH) and ClpB protease (clpB) genes, complete cds; 16S ribosomal RNA gene, complete sequence; intergenic spacer, complete sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 9906 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 115 agctgaaggtgcaattgatgctgctaacatcttaaaaccagc 156 ||||||||| ||||| ||||||| ||| || ||||||||||| Sbjct: 2672 agctgaaggagcaatggatgctggtaatatgttaaaaccagc 2713
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ggtgaactgcagtgcattggtgccacaacactggatgagtac 208 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 2845942 ggtgaactgcagaccattggtgcaaccaccctggatgagtac 2845901
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 398 gatcgcttcctgcctgacaaggctattgac 427 ||||||||| ||||||||||||| |||||| Sbjct: 771517 gatcgcttcttgcctgacaaggccattgac 771488
>gb|M92325.1|TRBCLP Trypanosoma brucei TbClp protein (Clp) gene, complete cds Length = 2800 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcg 442 |||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 1249 cgcttcatgcctgacaaggccatcgacctcattgatgaagcg 1290
>ref|NM_106091.2| Arabidopsis thaliana ATHSP101 (HEAT SHOCK PROTEIN 101); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT1G74310 (ATHSP101) mRNA, complete cds Length = 3737 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 ||||||||||| ||||| || || || ||||||||| || | ||||||||| |||| || Sbjct: 1153 tgcattggtgctacaacgcttgaagaatacaggaaatatgttgagaaagatgctgccttt 1212 Query: 239 gagcgaaggtttcaaccagtc 259 ||| | ||||| |||| |||| Sbjct: 1213 gagaggaggttccaacaagtc 1233 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaa 33 ||||| |||||||||||||||||| |||| Sbjct: 976 taccgaggagagtttgaagaaaggttgaa 1004
>gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, complete sequence Length = 157264 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 tcagtgatcgcttcctgcctgacaaggct 421 |||||||| ||||||||||||||||||| Sbjct: 97967 tcagtgatttcttcctgcctgacaaggct 97995
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24, complete sequence Length = 146492 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tgatgatattatactctttat 81 ||||||||||||||||||||| Sbjct: 143502 tgatgatattatactctttat 143482
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tgatgatattatactctttat 81 ||||||||||||||||||||| Sbjct: 17769 tgatgatattatactctttat 17749
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 389 tatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||| ||||||| ||||| || || || |||||||||||||||||||| Sbjct: 989732 tatatcactgatcgcaagctgccggataaagccattgacttgattgatgaagc 989784
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagct 157 ||||||||||||| || |||||||||||| Sbjct: 1844641 ttgatgctgctaatattttaaaaccagct 1844613
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 389 tatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||| || |||||||||||||| || || || || ||||| ||||||||||| Sbjct: 5456208 tatattagcgatcgcttcctgcccgataaagccatagacttaattgatgaagc 5456156
>gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence Length = 300758 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 389 tatatcagtgatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||| || ||||||||||| || ||||| |||||||| ||| | |||||||| Sbjct: 161802 tatattagcgatcgcttcctacccgacaaagctattgatttggtggatgaagc 161750
>ref|XM_747390.1| Aspergillus fumigatus Af293 ATP-dependent Clp protease (Afu1g11180) partial mRNA Length = 2394 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 agaggtgaactgcagtgcattggtgccac 192 |||||||||||||||||| ||||||||| Sbjct: 676 agaggtgaactgcagtgctgtggtgccac 704
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 158 cttgcaagaggtgaactgcagtgcattggtgccacaacact 198 ||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 2313195 cttgccagaggtgaactgcattgcataggtgctactacact 2313155
>gb|AE014274.1| Streptococcus agalactiae 2603V/R section 84 of 100 of the complete genome Length = 22877 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagct 157 ||||||||||||| || |||||||||||| Sbjct: 21327 ttgatgctgctaatattttaaaaccagct 21299
>emb|BX571863.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 5/17 Length = 349318 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Plus Query: 116 gctgaaggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactg 175 ||||| || ||||| ||||||| |||||| |||||||| || | || | |||||||| Sbjct: 79640 gctgatggggcaatggatgctggtaacatgttaaaacccgccttggcccgtggtgaactt 79699 Query: 176 cagtgcattggtgccacaacactggatga 204 || || ||||||| |||||||||||||| Sbjct: 79700 cactgtgttggtgcaacaacactggatga 79728
>emb|AL766854.1|SAG766854 Streptococcus agalactiae NEM316 complete genome, segment 12 Length = 98050 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagct 157 ||||||||||||| || |||||||||||| Sbjct: 13708 ttgatgctgctaatattttaaaaccagct 13680
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 274355 cgcttcctgcccgacaaagcgattgatttgattgacgaagc 274395
>gb|AY062596.1| Arabidopsis thaliana heat shock protein 101 (At1g74310; F1O17.2) mRNA, partial cds Length = 1570 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 ||||||||||| ||||| || || || ||||||||| || | ||||||||| |||| || Sbjct: 1119 tgcattggtgctacaacgcttgaagaatacaggaaatatgttgagaaagatgctgccttt 1178 Query: 239 gagcgaaggtttcaaccagtc 259 ||| | ||||| |||| |||| Sbjct: 1179 gagaggaggttccaacaagtc 1199 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaa 33 ||||| |||||||||||||||||| |||| Sbjct: 942 taccgaggagagtttgaagaaaggttgaa 970
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagc 441 ||||||||||| |||||||| || || ||||||||||||| Sbjct: 2145797 cgcttcctgccggacaaggccatcgatctgattgatgaagc 2145837
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tgatgatattatactctttat 81 ||||||||||||||||||||| Sbjct: 8221281 tgatgatattatactctttat 8221261
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 ||||||||||| ||||| || || || ||||||||| || | ||||||||| |||| || Sbjct: 14023 tgcattggtgctacaacgcttgaagaatacaggaaatatgttgagaaagatgctgccttt 14082 Query: 239 gagcgaaggtttcaaccagtc 259 ||| | ||||| |||| |||| Sbjct: 14083 gagaggaggttccaacaagtc 14103 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaa 33 ||||| |||||||||||||||||| |||| Sbjct: 13846 taccgaggagagtttgaagaaaggttgaa 13874
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 42.1 bits (21), Expect = 1.8 Identities = 153/197 (77%) Strand = Plus / Minus Query: 62 gatgatattatactctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaa 121 |||||||| ||||||||||| |||||| |||| | | | || || |||| ||| ||| Sbjct: 2789881 gatgatataatactctttatagatgaaatgcataatattgttggggctggtggagcagaa 2789822 Query: 122 ggtgcaattgatgctgctaacatcttaaaaccagctcttgcaagaggtgaactgcagtgc 181 ||||| || ||||| | || || |||||||||||| | |||||||||||| | || || Sbjct: 2789821 ggtgctatagatgcatcaaatatattaaaaccagctttagcaagaggtgaaatacaatgt 2789762 Query: 182 attggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttggag 241 || ||||| |||||| ||||| || || ||| |||| || || ||| ||||||| ||| Sbjct: 2789761 ataggtgcgacaacaactgatgaatatagaaaaaatatagaaaaggattctgctttagag 2789702 Query: 242 cgaaggtttcaaccagt 258 |||| || |||||||| Sbjct: 2789701 agaagattccaaccagt 2789685
>gb|AF218796.1|AF218796 Arabidopsis thaliana heat shock protein 101 (HSP101) gene, complete cds Length = 6376 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 ||||||||||| ||||| || || || ||||||||| || | ||||||||| |||| || Sbjct: 2062 tgcattggtgctacaacgcttgaagaatacaggaaatatgttgagaaagatgctgccttt 2121 Query: 239 gagcgaaggtttcaaccagtc 259 ||| | ||||| |||| |||| Sbjct: 2122 gagaggaggttccaacaagtc 2142 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaa 33 ||||| |||||||||||||||||| |||| Sbjct: 1885 taccgaggagagtttgaagaaaggttgaa 1913
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 404 ttcctgcctgacaaggctattgacttgattgatgaag 440 ||||| |||||||| ||||||||||| ||||||||| Sbjct: 1496421 ttccttcctgacaaagctattgacttacttgatgaag 1496385
>gb|U13949.1|ATU13949 Arabidopsis thaliana heat shock protein AtHSP101 (Athsp101) mRNA, complete cds Length = 3105 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgctttg 238 ||||||||||| ||||| || || || ||||||||| || | ||||||||| |||| || Sbjct: 1093 tgcattggtgctacaacgcttgaagaatacaggaaatatgttgagaaagatgctgccttt 1152 Query: 239 gagcgaaggtttcaaccagtc 259 ||| | ||||| |||| |||| Sbjct: 1153 gagaggaggttccaacaagtc 1173 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 taccgtggagagtttgaagaaaggctgaa 33 ||||| |||||||||||||||||| |||| Sbjct: 916 taccgaggagagtttgaagaaaggttgaa 944
>ref|XM_630045.1| Dictyostelium discoideum hypothetical protein (DDB0183816), partial mRNA Length = 2661 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 gcaagaggtgaactgcagtgcattggtgccacaacactggatga 204 |||||||||||||| | || |||||||| |||||| ||||||| Sbjct: 910 gcaagaggtgaacttcgttgtattggtgctacaacattggatga 953
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 179 tgcattggtgccacaacactggatgagtacaggaaacatatcgagaaagatcctgc 234 ||||| |||||||| || || |||||||||||||| || || ||||| ||| |||| Sbjct: 169034 tgcatcggtgccacgacgctcgatgagtacaggaagcacattgagaaggatgctgc 169089
>ref|XM_466044.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2817 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 158 cttgcaagaggtgaactgcagtgcattg 185 ||||| ||||||||| |||||||||||| Sbjct: 1231 cttgctagaggtgaattgcagtgcattg 1258
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 398 gatcgcttcctgcctgacaaggctattgacttgattgatgaagc 441 |||||||||||||| |||||||| || ||| |||| || ||||| Sbjct: 2194689 gatcgcttcctgccggacaaggccatcgacctgatcgacgaagc 2194646
>gb|AC159409.1| Trypanosoma brucei chromosome 7 clone RPCI93-15M23, complete sequence Length = 157301 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tgctttagttgctgcagcgc 374 |||||||||||||||||||| Sbjct: 104156 tgctttagttgctgcagcgc 104137
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tgctttagttgctgcagcgc 374 |||||||||||||||||||| Sbjct: 1862171 tgctttagttgctgcagcgc 1862152
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1724528 ttgatgcggctaacattttaaaaccagc 1724501
>gb|AE008573.1| Rickettsia conorii str. Malish 7, section 5 of 114 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 410 cctgacaaggctattgacttgattgatgaagc 441 ||||| || |||||||| |||||||||||||| Sbjct: 4635 cctgataaagctattgatttgattgatgaagc 4666
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattga 132 |||||||||||| | || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 96249 tttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtgctattga 96304
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gaagaaattaagcaaaatgatgat 67 |||||| ||||||||||||||||| Sbjct: 18362 gaagaatttaagcaaaatgatgat 18339
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1771771 ttgatgcggctaacattttaaaaccagc 1771744
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattga 132 |||||||||||| | || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 90521 tttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtgctattga 90576
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattga 132 |||||||||||| | || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 90522 tttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtgctattga 90577
>gb|AE006627.1| Streptococcus pyogenes M1 GAS, section 156 of 167 of the complete genome Length = 10389 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 8264 ttgatgcggctaacattttaaaaccagc 8237
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1815665 ttgatgcggctaacattttaaaaccagc 1815638
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1787189 ttgatgcggctaacattttaaaaccagc 1787162
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1725184 ttgatgcggctaacattttaaaaccagc 1725157
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 389 tatatcagtgatcgcttcctgcctgacaaggc 420 ||||||| ||||| ||||||||||||||||| Sbjct: 665147 tatatcaccgatcgtttcctgcctgacaaggc 665178
>ref|XM_818591.1| Trypanosoma brucei TREU927 clone RPCI93-15M23 hypothetical protein (Tb927.7.6740) partial mRNA Length = 2982 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgctttagttgctgcagcgc 374 |||||||||||||||||||| Sbjct: 1852 tgctttagttgctgcagcgc 1871
>gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosome 7, complete sequence Length = 226601 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 aacactggatgagtacaggaaaca 216 ||||||||||||| |||||||||| Sbjct: 21862 aacactggatgagaacaggaaaca 21885
>gb|AC090061.15| Homo sapiens 12 BAC RP11-637A17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 23401 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aagaaattaagcaaaatgat 64 |||||||||||||||||||| Sbjct: 18873 aagaaattaagcaaaatgat 18854
>gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds; nuclear gene for chloroplast product Length = 3142 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 158 cttgcaagaggtgaactgcagtgcattg 185 ||||| ||||||||| |||||||||||| Sbjct: 1336 cttgctagaggtgaattgcagtgcattg 1363
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence Length = 119297 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 410 cctgacaaggctattgacttgattgatgaagc 441 ||||| ||||| ||||| |||||||||||||| Sbjct: 105265 cctgataaggcaattgatttgattgatgaagc 105296
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 410 cctgacaaggctattgacttgattgatgaagc 441 ||||| || |||||||| |||||||||||||| Sbjct: 166692 cctgataaagctattgatttgattgatgaagc 166661
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 1760069 ttgatgcggctaacattttaaaaccagc 1760042
>emb|AL606503.10| Human DNA sequence from clone RP11-63B15 on chromosome 1, complete sequence Length = 143104 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagtttgaagaaaggctgaa 33 |||||||||||||||||||| Sbjct: 100562 gagtttgaagaaaggctgaa 100543
>emb|AL139411.11| Human DNA sequence from clone RP11-222A5 on chromosome 1q23.1-25.3 Contains a novel gene, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagaaattaagcaaaatga 63 |||||||||||||||||||| Sbjct: 35435 gaagaaattaagcaaaatga 35454
>emb|AL133406.14| Human DNA sequence from clone RP3-355L5 on chromosome 6q16.3-21 Contains the 3' end of the PREP gene for prolyl endopeptidase, a ribosomal protein L7 (RPL7) pseudogene, a ribosomal protein L35 (RPL35) pseudogene and a putative novel gene (FLJ32396), complete sequence Length = 103421 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tggaagaaattaagcaaaat 61 |||||||||||||||||||| Sbjct: 64681 tggaagaaattaagcaaaat 64700
>emb|AL020991.1|HS884M20 Human DNA sequence from clone RP5-884M20 on chromosome Xp11.21 Contains the ALAS2 gene for aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia), the APEX2 gene for APEX nuclease (apurinic/apyrimidinic endonuclease) 2, the 5' end of the PFKFB1 gene for 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 and a CpG island, complete sequence Length = 114173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggagcaggtgcagctgaagg 123 |||||||||||||||||||| Sbjct: 8825 ggagcaggtgcagctgaagg 8806
>emb|BX927275.8| Zebrafish DNA sequence from clone DKEY-108P14 in linkage group 23, complete sequence Length = 133912 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 aatcaatacaaatcttaaga 304 |||||||||||||||||||| Sbjct: 106497 aatcaatacaaatcttaaga 106478
>emb|Z99104.2|BSUB0001 Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080 Length = 213080 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcggg 444 |||||||| || || || || ||||||||||| ||||||||||| Sbjct: 104721 cgcttccttccggataaagcaattgacttgatcgatgaagcggg 104764
>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12 Length = 253050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tttattgatgaagtgcacac 96 |||||||||||||||||||| Sbjct: 55031 tttattgatgaagtgcacac 55012
>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence Length = 158548 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gaagaaattaagcaaaatgatgat 67 ||||||||||| |||||||||||| Sbjct: 107549 gaagaaattaaacaaaatgatgat 107572
>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4 Length = 282610 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 410 cctgacaaggctattgacttgattgatgaagc 441 ||||| || |||||||| |||||||||||||| Sbjct: 39535 cctgataaagctattgatttgattgatgaagc 39566
>emb|AJ224158.1|BAAJ4158 Bacillus anthracis clpC-like gene, partial Length = 1032 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattga 132 |||||||||||| | || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 199 tttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtgctattga 254
>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 203827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagtcaaggttccagagccc 274 |||||||||||||||||||| Sbjct: 12970 cagtcaaggttccagagccc 12989
>gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180388 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tccagagcccactgttgaag 284 |||||||||||||||||||| Sbjct: 38346 tccagagcccactgttgaag 38327
>gb|DQ088388.1| Onchocerca volvulus aspartate aminotransferase mRNA, complete cds Length = 1294 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cttaaaaccagctcttgcaa 164 |||||||||||||||||||| Sbjct: 435 cttaaaaccagctcttgcaa 416
>gb|DQ088387.1| Onchocerca volvulus aspartate aminotransferase gene, complete cds Length = 3242 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cttaaaaccagctcttgcaa 164 |||||||||||||||||||| Sbjct: 1135 cttaaaaccagctcttgcaa 1116
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 173 ctgcagtgcattggtgccacaacactggatgagtac 208 ||||||||||| || ||||| || |||||||||||| Sbjct: 618556 ctgcagtgcatcggcgccaccaccctggatgagtac 618591
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 173 ctgcagtgcattggtgccacaacactggatgagtac 208 ||||||||||| || ||||| || |||||||||||| Sbjct: 665153 ctgcagtgcatcggcgccaccacgctggatgagtac 665188
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 389 tatatcagtgatcgcttcctgcctgacaaggc 420 ||||||| |||||||||||||| |||||||| Sbjct: 3978988 tatatcacggatcgcttcctgcccgacaaggc 3978957
>gb|AE010115.1| Streptococcus pyogenes strain MGAS8232, section 163 of 173 of the complete genome Length = 11576 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 ttgatgctgctaacatcttaaaaccagc 156 ||||||| |||||||| ||||||||||| Sbjct: 5133 ttgatgcggctaacattttaaaaccagc 5106
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gaagaaattaagcaaaatgatgat 67 |||||| ||||||||||||||||| Sbjct: 729 gaagaatttaagcaaaatgatgat 752
>gb|AF401667.1| Lactobacillus sakei rrnC operon, partial sequence Length = 3798 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 74 ctctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgat 133 |||||||| |||||| |||| || || ||||| || |||| || ||||| ||||||||| Sbjct: 2522 ctctttatcgatgaattgcataccttaatcggtgctggtggggcagaaggcgcaattgat 2581 Query: 134 gctgctaacatcttaaaacc 153 || | |||||||| ||||| Sbjct: 2582 gcctcaaacatcttgaaacc 2601
>dbj|AK046145.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230344N16 product:unknown EST, full insert sequence Length = 2895 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 aacactggatgagtacaggaaaca 216 ||||||||||||| |||||||||| Sbjct: 1832 aacactggatgagaacaggaaaca 1809
>emb|AL670091.26| Mouse DNA sequence from clone RP23-232F13 on chromosome X, complete sequence Length = 162274 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttatactctttattgatgaa 88 |||||||||||||||||||| Sbjct: 49494 ttatactctttattgatgaa 49513
>gb|AF279753.1|AF279753 Calicotyle urolophi isolate paucimaculatus 28S large subunit ribosomal RNA gene, partial sequence Length = 924 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtgaactgcagtgcattggt 187 |||||||||||||||||||| Sbjct: 450 gtgaactgcagtgcattggt 469
>gb|AF279752.1|AF279752 Calicotyle urolophi isolate cruciatus 28S large subunit ribosomal RNA gene, partial sequence Length = 924 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtgaactgcagtgcattggt 187 |||||||||||||||||||| Sbjct: 450 gtgaactgcagtgcattggt 469
>gb|AF083343.2|AF083343 Nicotiana tabacum heat shock protein 101 kDa (HSP101) mRNA, complete cds Length = 3052 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 178 gtgcattggtgccacaacactggatgagtacaggaa 213 |||||||||||| || ||||| || ||||||||||| Sbjct: 1033 gtgcattggtgcaactacactcgaggagtacaggaa 1068
>gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7, complete sequence Length = 147098 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aagaaattaagcaaaatgat 64 |||||||||||||||||||| Sbjct: 126676 aagaaattaagcaaaatgat 126657
>gb|AC084620.1|CBRG44L02 Caenorhabditis briggsae cosmid G44L02, complete sequence Length = 43429 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 agatatgaacttcatcataa 336 |||||||||||||||||||| Sbjct: 33726 agatatgaacttcatcataa 33745
>gb|AF234652.1|AF234652 Mesembryanthemum crystallinum protein kinase MK5 mRNA, complete cds Length = 1738 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aggtgcagctgaaggtgcaa 128 |||||||||||||||||||| Sbjct: 264 aggtgcagctgaaggtgcaa 245
>emb|Z83821.1|HS296K21 Human DNA sequence from clone RP1-296K21 on chromosome Xq13, complete sequence Length = 111994 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggagcaggtgcagctgaagg 123 |||||||||||||||||||| Sbjct: 7323 ggagcaggtgcagctgaagg 7304
>dbj|AK068727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L15, full insert sequence Length = 2619 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 158 cttgcaagaggtgaactgcagtgcattg 185 ||||| ||||||||| |||||||||||| Sbjct: 884 cttgctagaggtgaattgcagtgcattg 911
>gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, complete sequence Length = 211542 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aagcttatggaagaaattaa 54 |||||||||||||||||||| Sbjct: 124042 aagcttatggaagaaattaa 124023
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 74 ctctttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattgat 133 |||||||| |||||| |||| || || ||||| || |||| || ||||| ||||||||| Sbjct: 1756662 ctctttatcgatgaattgcataccttaatcggtgctggtggggcagaaggcgcaattgat 1756603 Query: 134 gctgctaacatcttaaaacc 153 || | |||||||| ||||| Sbjct: 1756602 gcctcaaacatcttgaaacc 1756583
>emb|AL356020.3|CNS05TDA Human chromosome 14 DNA sequence BAC R-547D23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171951 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tttgaagaaaggctgaagaa 36 |||||||||||||||||||| Sbjct: 73509 tttgaagaaaggctgaagaa 73490
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 77 tttattgatgaagtgcacacgttgatcggagcaggtgcagctgaaggtgcaattga 132 |||||||||||| | || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 90521 tttattgatgaacttcatacattaatcggtgcaggtggagcagaaggtgctattga 90576
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gctgaaggtgcaattgatgc 135 |||||||||||||||||||| Sbjct: 1033628 gctgaaggtgcaattgatgc 1033647
>gb|AC121960.3| Mus musculus BAC clone RP24-248C17 from 14, complete sequence Length = 160030 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 gatgaggccaaggagctgga 498 |||||||||||||||||||| Sbjct: 80979 gatgaggccaaggagctgga 80960
>gb|AC124505.4| Mus musculus BAC clone RP23-421P23 from 7, complete sequence Length = 222439 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 aacactggatgagtacaggaaaca 216 ||||||||||||| |||||||||| Sbjct: 221896 aacactggatgagaacaggaaaca 221919
>emb|AL672222.11| Mouse DNA sequence from clone RP23-330A15 on chromosome X, complete sequence Length = 194025 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 aaggctattgacttgattga 435 |||||||||||||||||||| Sbjct: 158226 aaggctattgacttgattga 158207
>gb|L35272.1|SOYSB100HS Glycine max heat shock protein (SB100) mRNA, complete cds Length = 3049 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 178 gtgcattggtgccacaacactggatgagtacaggaa 213 ||||||||||||||| || || || ||||||||||| Sbjct: 1068 gtgcattggtgccaccacgcttgaggagtacaggaa 1103
>gb|U02604.1|BSU02604 Bacillus subtilis Marburg 168 ClpC adenosine triphosphatase (mecB) gene, complete cds, orfX and orfY, partial cds Length = 3637 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcggg 444 |||||||| || || || || ||||||||||| ||||||||||| Sbjct: 1487 cgcttccttccggataaagcaattgacttgatcgatgaagcggg 1530
>dbj|D26185.1|BAC180K B. subtilis DNA, 180 kilobase region of replication origin Length = 180136 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 401 cgcttcctgcctgacaaggctattgacttgattgatgaagcggg 444 |||||||| || || || || ||||||||||| ||||||||||| Sbjct: 168323 cgcttccttccggataaagcaattgacttgatcgatgaagcggg 168366 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,704,796 Number of Sequences: 3902068 Number of extensions: 4704796 Number of successful extensions: 92597 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90630 Number of HSP's gapped (non-prelim): 1961 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
