| Clone Name | baal3h20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SPE2C_STRPU (P04111) SPEC 2C protein | 32 | 0.38 | 2 | SPE2A_STRPU (P04110) SPEC 2A protein | 30 | 1.4 | 3 | RBP1A_ARATH (Q9LMK7) Ran-binding protein 1 homolog a (Ran-bindin... | 29 | 4.1 | 4 | CML18_ARATH (Q9M8U1) Calmodulin-like protein 18 (Calmodulin-15) ... | 28 | 7.1 | 5 | CALB2_RAT (P47728) Calretinin (CR) | 28 | 7.1 | 6 | CALB2_MOUSE (Q08331) Calretinin (CR) | 28 | 7.1 | 7 | CALB2_HUMAN (P22676) Calretinin (CR) (29 kDa calbindin) | 28 | 7.1 | 8 | CALB2_CHICK (P07090) Calretinin (CR) | 28 | 9.2 |
|---|
>SPE2C_STRPU (P04111) SPEC 2C protein| Length = 151 Score = 32.3 bits (72), Expect = 0.38 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +3 Query: 18 KTIFQQFXEDSNGEXDKEELKNCFQKLEISFTEEEI 125 K+ F+ D +G+ EELK F+ +EI T+E+I Sbjct: 16 KSSFKSIDADGDGKITPEELKAAFKSIEIELTQEKI 51
>SPE2A_STRPU (P04110) SPEC 2A protein| Length = 150 Score = 30.4 bits (67), Expect = 1.4 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 18 KTIFQQFXEDSNGEXDKEELKNCFQKLEISFTEEEI 125 K+ F+ D +G+ EEL+ F+ +EI T+E+I Sbjct: 16 KSSFKSEDTDGDGKITSEELRAAFKSIEIDLTQEKI 51
>RBP1A_ARATH (Q9LMK7) Ran-binding protein 1 homolog a (Ran-binding protein| siRanBP) Length = 228 Score = 28.9 bits (63), Expect = 4.1 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Frame = +3 Query: 6 LRKCKTIFQQFXEDSNGEXDKEELKNC------FQKLEISFTEEE 122 + CKT Q+F E + E +KEE K+ +KL + T+ E Sbjct: 143 IENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKTE 187
>CML18_ARATH (Q9M8U1) Calmodulin-like protein 18 (Calmodulin-15) (AtCaM-15)| Length = 165 Score = 28.1 bits (61), Expect = 7.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 18 KTIFQQFXEDSNGEXDKEELKNCFQKLEISFTEEEI 125 K IF+ F D NG EL + KL + T EE+ Sbjct: 96 KAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEEL 131
>CALB2_RAT (P47728) Calretinin (CR)| Length = 271 Score = 28.1 bits (61), Expect = 7.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 24 IFQQFXEDSNGEXDKEELKNCFQKLE 101 I++ F D NG + +EL+N FQ+LE Sbjct: 24 IWKHFDADGNGYIEGKELENFFQELE 49
>CALB2_MOUSE (Q08331) Calretinin (CR)| Length = 271 Score = 28.1 bits (61), Expect = 7.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 24 IFQQFXEDSNGEXDKEELKNCFQKLE 101 I++ F D NG + +EL+N FQ+LE Sbjct: 24 IWKHFDADGNGYIEGKELENFFQELE 49
>CALB2_HUMAN (P22676) Calretinin (CR) (29 kDa calbindin)| Length = 271 Score = 28.1 bits (61), Expect = 7.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 24 IFQQFXEDSNGEXDKEELKNCFQKLE 101 I++ F D NG + +EL+N FQ+LE Sbjct: 24 IWKHFDADGNGYIEGKELENFFQELE 49
>CALB2_CHICK (P07090) Calretinin (CR)| Length = 269 Score = 27.7 bits (60), Expect = 9.2 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +3 Query: 24 IFQQFXEDSNGEXDKEELKNCFQKLE 101 +++ F D NG + +EL+N FQ+LE Sbjct: 22 VWRHFDADGNGYIEGKELENFFQELE 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,427,157 Number of Sequences: 219361 Number of extensions: 95020 Number of successful extensions: 457 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 457 length of database: 80,573,946 effective HSP length: 18 effective length of database: 76,625,448 effective search space used: 1839010752 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)