| Clone Name | baal3h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110655.1| Zea mays CL9117_1 mRNA sequence Length = 1124 Score = 63.9 bits (32), Expect = 1e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||| |||| |||||| |||| ||| | |||||||||||||||||||||||||| Sbjct: 1109 gctctccaacggcaagatcaccgcgaggatctccaactggggcgccaccatcacctccct 1050
>ref|NM_194929.1| Oryza sativa (japonica cultivar-group) putative aldose 1-epimerase - like protein (OSJNAa0034B05.14), mRNA Length = 1032 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 24 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 83
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 48212 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 48153
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 113867 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 113808
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457083 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3457024
>dbj|AK121800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096P07, full insert sequence Length = 1341 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 123 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 182
>dbj|AK061152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F01, full insert sequence Length = 1857 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 630 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 689
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 3e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 86 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 145 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457004 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3456945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tctagcgaagcaagcaagca 38 |||||||||||||||||||| Sbjct: 3727557 tctagcgaagcaagcaagca 3727576
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tctagcgaagcaagcaagca 38 |||||||||||||||||||| Sbjct: 1099 tctagcgaagcaagcaagca 1118
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tctagcgaagcaagcaagca 38 |||||||||||||||||||| Sbjct: 1758 tctagcgaagcaagcaagca 1739
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ggcaggatcacggcgaaca 114 ||||||||||||||||||| Sbjct: 2534236 ggcaggatcacggcgaaca 2534254
>ref|XM_499981.1| Yarrowia lipolytica CLIB122, YALI0A11473g predicted mRNA Length = 3765 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tggcggtggagcccgagat 79 ||||||||||||||||||| Sbjct: 2957 tggcggtggagcccgagat 2975
>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence Length = 186366 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 ctgcgtgctctccaatggc 98 ||||||||||||||||||| Sbjct: 54461 ctgcgtgctctccaatggc 54479
>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete sequence Length = 220538 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 ctgcgtgctctccaatggc 98 ||||||||||||||||||| Sbjct: 20831 ctgcgtgctctccaatggc 20813
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tggcggtggagcccgagat 79 ||||||||||||||||||| Sbjct: 1186633 tggcggtggagcccgagat 1186651 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 692,901 Number of Sequences: 3902068 Number of extensions: 692901 Number of successful extensions: 71550 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71394 Number of HSP's gapped (non-prelim): 156 length of query: 145 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 124 effective length of database: 17,151,101,840 effective search space: 2126736628160 effective search space used: 2126736628160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)