| Clone Name | baal3g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087E02, full insert sequence Length = 1223 Score = 706 bits (356), Expect = 0.0 Identities = 602/684 (88%) Strand = Plus / Plus Query: 1 catgtgcatggtcttttcaatgctctatttgcgcccctctattcaggatcagtggttgag 60 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 50 catgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggttgag 109 Query: 61 tttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcatatcccaag 120 || ||||| ||||| |||||||||||| |||||||||| ||| |||||||||||||||| Sbjct: 110 ttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcatatcccaac 169 Query: 121 ggcaccagtaaaaatgatgaggctattaccgtatttactggagttccaacagtgtacaca 180 ||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| Sbjct: 170 aatggcagtaaaaatgatgaagcaattacagtatttactggagttccaacaatgtacaca 229 Query: 181 cgcctactgcaagggtacgatagtatgaatcctgatcaacaatctgcctgttcttacgct 240 || ||| |||||||||| ||| ||||| ||||||| ||||| ||||| | ||| | ||| Sbjct: 230 cggctattgcaagggtatgatggtatggatcctgaacaacagtctgcatcttcctttgct 289 Query: 241 gcaaagcagctgagactaatgatgtgtggatcctcagcactcccttctccactcatgaaa 300 |||||||| |||| ||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 290 gcaaagcaattgaggctaatgatgtgtggatcatcggcccttccttccccacttatgaaa 349 Query: 301 cggtgggaggaagtgacatgccaccgtcttttggaacgctatggcatgactgagtttgtc 360 |||||||||||||||||| | ||||||||||||||||| || |||||||||||||||||| Sbjct: 350 cggtgggaggaagtgacaggtcaccgtcttttggaacgatacggcatgactgagtttgtc 409 Query: 361 atggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggtaaacctctt 420 |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 410 atggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggcaaaccgctt 469 Query: 421 ccacgtgttgaggccaagatcattatggatgatggtacagaaactaaagatggagtcggt 480 || |||||||||||||||| |||||||| ||||| | ||||||| | || ||| || Sbjct: 470 ccgtgtgttgaggccaagattattatggaggatggggctgaaactacatctgaagttggc 529 Query: 481 gagctctgtattaaaagtccatcccttttcaaagagtactggaaaagaccagaggttact 540 ||||| ||||||| ||||||||||||||| || || || |||| || ||||||||||||| Sbjct: 530 gagctttgtattagaagtccatccctttttaaggaatattggagaaaaccagaggttact 589 Query: 541 gcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaactgtagacgag 600 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 590 gcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactgtagacgat 649 Query: 601 gatggatattttataattttagggcgcacaaatgctgacatcatgaaagttggtggttac 660 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 aaaggatatttcataattttagggcgcacaaatgctgacatcatgaaagttggtggttat 709 Query: 661 aagttatcagcattagaaattgag 684 ||| | || ||||||||||||||| Sbjct: 710 aagctgtctgcattagaaattgag 733
>ref|XM_463442.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1809 Score = 228 bits (115), Expect = 2e-56 Identities = 142/151 (94%) Strand = Plus / Plus Query: 534 ggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaactgt 593 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 1371 ggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactgt 1430 Query: 594 agacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaagttgg 653 |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 agacgatgaaggatatttcataattttagggcgcacaaatgctgacatcatgaaagttgg 1490 Query: 654 tggttacaagttatcagcattagaaattgag 684 |||||| ||| | || ||||||||||||||| Sbjct: 1491 tggttataagctgtctgcattagaaattgag 1521
>gb|AY110244.1| Zea mays CL30761_1 mRNA sequence Length = 781 Score = 206 bits (104), Expect = 7e-50 Identities = 245/292 (83%) Strand = Plus / Minus Query: 394 aaagaaggtacagtcggtaaacctcttccacgtgttgaggccaagatcattatggatgat 453 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 763 aaagaaggtacaggtggtaaacctcttccacgcattgaggccaagatcattatggaggac 704 Query: 454 ggtacagaaactaaagatggagtcggtgagctctgtattaaaagtccatcccttttcaaa 513 || | ||||||| | |||||| || |||||||| |||| ||| | | |||||||| Sbjct: 703 ggggctgaaactacaactggagttggcgagctctgcattagaaggggagctcttttcaag 644 Query: 514 gagtactggaaaagaccagaggttactgcagaatcatttatcgatggtgggttcttcaag 573 ||||| |||||||||||||| | || ||||||| || || ||||| || ||||||||| Sbjct: 643 gagtattggaaaagaccagacgagacaccagaatctttcattgatggaggattcttcaag 584 Query: 574 actggtgatactgtaactgtagacgaggatggatattttataattttagggcgcacaaat 633 || |||||||| ||||||||||| ||||| ||||| || |||||||| || ||||||||| Sbjct: 583 acaggtgatacagtaactgtagatgaggaaggatacttcataattttgggacgcacaaat 524 Query: 634 gctgacatcatgaaagttggtggttacaagttatcagcattagaaattgagg 685 || ||||| |||||| |||| ||||||||| | ||||||||||||||||||| Sbjct: 523 gccgacattatgaaatttggcggttacaagctgtcagcattagaaattgagg 472
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 6e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 533 aggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaactg 592 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32024486 aggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactg 32024545 Query: 593 tagacgaggatggatattttataattttagggcg 626 ||||||| || |||||||| |||||||||||||| Sbjct: 32024546 tagacgatgaaggatatttcataattttagggcg 32024579 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 261 gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 320 |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| | Sbjct: 32023515 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 32023574 Query: 321 ccaccgtcttttggaacgctatggcatgactgag 354 ||||||||||||||||| || |||||||||||| Sbjct: 32023575 tcaccgtcttttggaacgatacggcatgactgag 32023608 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 353 agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 412 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 32023698 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 32023757 Query: 413 aacctcttccacgtgttgagg 433 |||| ||||| ||||||||| Sbjct: 32023758 aaccgcttccgtgtgttgagg 32023778 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 54 ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 113 ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| |||||||||| Sbjct: 32022566 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 32022625 Query: 114 tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 164 |||||| ||||||||||||||| || ||||| |||||||||||||| Sbjct: 32022626 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 32022676 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 626 gcacaaatgctgacatcatgaaagttggtggttacaagttatcagcattagaaattgag 684 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 32024693 gcacaaatgctgacatcatgaaagttggtggttataagctgtctgcattagaaattgag 32024751 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1 catgtgcatggtcttttcaatgctctatttgcgcccctctattcaggatcagtggt 56 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 32022274 catgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggt 32022329 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 163 gttccaacagtgtacacacgcctactgcaagggtacgatagtatgaatcctgatcaacaa 222 ||||||||| |||||||||| ||| |||||||||| ||| ||||| ||||||| ||||| Sbjct: 32022783 gttccaacaatgtacacacggctattgcaagggtatgatggtatggatcctgaacaacag 32022842 Query: 223 tctgcctgttcttacgctgcaaagcagctgagactaatg 261 ||||| | ||| | ||||||||||| |||| |||||| Sbjct: 32022843 tctgcatcttcctttgctgcaaagcaattgaggctaatg 32022881 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 431 aggccaagatcattatggatgatggtacagaaactaaagatggagtcggtgagctctgta 490 |||||||||| |||||||| ||||| | ||||||| | || ||| || ||||| |||| Sbjct: 32023867 aggccaagattattatggaggatggggctgaaactacatctgaagttggcgagctttgta 32023926 Query: 491 ttaaaagtccatcccttttcaaagagtactggaaaagaccagaggt 536 ||| ||||||||||||||| || || || |||| || ||||||||| Sbjct: 32023927 ttagaagtccatccctttttaaggaatattggagaaaaccagaggt 32023972
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 147 bits (74), Expect = 6e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 533 aggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaactg 592 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 66300 aggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactg 66359 Query: 593 tagacgaggatggatattttataattttagggcg 626 ||||||| || |||||||| |||||||||||||| Sbjct: 66360 tagacgatgaaggatatttcataattttagggcg 66393 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 261 gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 320 |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| | Sbjct: 65329 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 65388 Query: 321 ccaccgtcttttggaacgctatggcatgactgag 354 ||||||||||||||||| || |||||||||||| Sbjct: 65389 tcaccgtcttttggaacgatacggcatgactgag 65422 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 353 agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 412 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 65512 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 65571 Query: 413 aacctcttccacgtgttgagg 433 |||| ||||| ||||||||| Sbjct: 65572 aaccgcttccgtgtgttgagg 65592 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 54 ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 113 ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| |||||||||| Sbjct: 64380 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 64439 Query: 114 tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 164 |||||| ||||||||||||||| || ||||| |||||||||||||| Sbjct: 64440 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 64490 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 626 gcacaaatgctgacatcatgaaagttggtggttacaagttatcagcattagaaattgag 684 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 66507 gcacaaatgctgacatcatgaaagttggtggttataagctgtctgcattagaaattgag 66565 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1 catgtgcatggtcttttcaatgctctatttgcgcccctctattcaggatcagtggt 56 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 64088 catgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggt 64143 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 431 aggccaagatcattatggatgatggtacagaaactaaagatggagtcggtgagctctgta 490 |||||||||| |||||||| ||||| | ||||||| | || ||| || ||||| |||| Sbjct: 65681 aggccaagattattatggaggatggggctgaaactacatctgaagttggcgagctttgta 65740 Query: 491 ttaaaagtccatcccttttcaaagagtactggaaaagaccagaggt 536 ||| ||||||||||||||| || || || |||| || ||||||||| Sbjct: 65741 ttagaagtccatccctttttaaggaatattggagaaaaccagaggt 65786
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 147 bits (74), Expect = 6e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 533 aggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaactg 592 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 121213 aggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactg 121272 Query: 593 tagacgaggatggatattttataattttagggcg 626 ||||||| || |||||||| |||||||||||||| Sbjct: 121273 tagacgatgaaggatatttcataattttagggcg 121306 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 261 gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 320 |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| | Sbjct: 120242 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 120301 Query: 321 ccaccgtcttttggaacgctatggcatgactgag 354 ||||||||||||||||| || |||||||||||| Sbjct: 120302 tcaccgtcttttggaacgatacggcatgactgag 120335 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 353 agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 412 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 120425 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 120484 Query: 413 aacctcttccacgtgttgagg 433 |||| ||||| ||||||||| Sbjct: 120485 aaccgcttccgtgtgttgagg 120505 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 54 ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 113 ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| |||||||||| Sbjct: 119293 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 119352 Query: 114 tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 164 |||||| ||||||||||||||| || ||||| |||||||||||||| Sbjct: 119353 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 119403 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 626 gcacaaatgctgacatcatgaaagttggtggttacaagttatcagcattagaaattgag 684 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 121420 gcacaaatgctgacatcatgaaagttggtggttataagctgtctgcattagaaattgag 121478 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1 catgtgcatggtcttttcaatgctctatttgcgcccctctattcaggatcagtggt 56 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 119001 catgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggt 119056 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 431 aggccaagatcattatggatgatggtacagaaactaaagatggagtcggtgagctctgta 490 |||||||||| |||||||| ||||| | ||||||| | || ||| || ||||| |||| Sbjct: 120594 aggccaagattattatggaggatggggctgaaactacatctgaagttggcgagctttgta 120653 Query: 491 ttaaaagtccatcccttttcaaagagtactggaaaagaccagaggt 536 ||| ||||||||||||||| || || || |||| || ||||||||| Sbjct: 120654 ttagaagtccatccctttttaaggaatattggagaaaaccagaggt 120699
>gb|BT013894.1| Lycopersicon esculentum clone 132881F, mRNA sequence Length = 2153 Score = 73.8 bits (37), Expect = 7e-10 Identities = 169/213 (79%) Strand = Plus / Plus Query: 471 tggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagacc 530 |||||| || |||||||| ||||| || ||||| || |||||||| ||||||||| ||| Sbjct: 1323 tggagttggggagctctgcattaagagcccatcactgttcaaagaatactggaaattacc 1382 Query: 531 agaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaac 590 ||||| || | ||||||| |||| ||| | ||||||||||| |||||||| || Sbjct: 1383 tgaggtaaccaagcagtcatttactgatgatggatatttcaagactggagatactgttac 1442 Query: 591 tgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaagt 650 ||| ||||| || || |||| || ||| |||| || ||||||||||| || ||||| | Sbjct: 1443 tgttgacgaagaggggtattacatcattctaggacgtacaaatgctgatattatgaagtt 1502 Query: 651 tggtggttacaagttatcagcattagaaattga 683 |||||| ||||| |||||||| || |||||||| Sbjct: 1503 tggtggatacaaattatcagcgttggaaattga 1535 Score = 71.9 bits (36), Expect = 3e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 1 catgtgcatggtcttttcaatgctctatttgcgcccctctattcaggatcagtggttgag 60 ||||||||||| |||||||||||| | |||| || || ||| |||| || ||| || Sbjct: 850 catgtgcatggacttttcaatgctttgcttgcccctctttatgcaggttccacggtcgac 909 Query: 61 tttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcatatcc 116 || ||||||||||||||||||||||| | |||||||||||| |||| |||||||| Sbjct: 910 ttcgtgccaaaattcagtgtgaggggaatttggcagagatggcgtgaatcatatcc 965 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 331 ttggaacgctatggcatgactgagtttgtcatggcactgtctaatcc 377 |||||||| |||||||||||||||||||| |||||| | |||||||| Sbjct: 1180 ttggaacgttatggcatgactgagtttgtgatggcaatctctaatcc 1226
>ref|NM_112487.3| Arabidopsis thaliana AMP binding / catalytic AT3G16170 mRNA, complete cds Length = 1980 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 384 |||||||||||| | |||||||||||||||||||| |||||| |||| || || || | Sbjct: 1159 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1218 Query: 385 ggtgcacggaaagaaggtacagtcggtaaacctcttcc 422 |||||||| || | |||||| ||||| ||||| ||||| Sbjct: 1219 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1256 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1298 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1357 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1358 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1417 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1418 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1477 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1478 ttggaggatacaagttatctgccttagaaat 1508 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gtatttactggagttccaacagtgtacac 179 |||||||||||||||||||| ||||||| Sbjct: 985 gtatttactggagttccaaccatgtacac 1013
>gb|BT000771.1| Arabidopsis thaliana clone RAFL08-14-H03 (R11349) putative long-chain acyl-CoA synthetase (At3g16170) mRNA, complete cds Length = 1943 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 384 |||||||||||| | |||||||||||||||||||| |||||| |||| || || || | Sbjct: 1105 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1164 Query: 385 ggtgcacggaaagaaggtacagtcggtaaacctcttcc 422 |||||||| || | |||||| ||||| ||||| ||||| Sbjct: 1165 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1202 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1244 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1303 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1304 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1363 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1364 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1423 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1424 ttggaggatacaagttatctgccttagaaat 1454 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gtatttactggagttccaacagtgtacac 179 |||||||||||||||||||| ||||||| Sbjct: 931 gtatttactggagttccaaccatgtacac 959
>gb|AY250842.1| Arabidopsis thaliana acyl-activating enzyme 13 (At3g16170) mRNA, complete cds Length = 1635 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 384 |||||||||||| | |||||||||||||||||||| |||||| |||| || || || | Sbjct: 988 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1047 Query: 385 ggtgcacggaaagaaggtacagtcggtaaacctcttcc 422 |||||||| || | |||||| ||||| ||||| ||||| Sbjct: 1048 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1085 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1127 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1186 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1187 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1246 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1247 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1306 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1307 ttggaggatacaagttatctgccttagaaat 1337 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gtatttactggagttccaacagtgtacac 179 |||||||||||||||||||| ||||||| Sbjct: 814 gtatttactggagttccaaccatgtacac 842
>gb|AY050378.1| Arabidopsis thaliana AT3g16170/MSL1_21 mRNA, complete cds Length = 1568 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 384 |||||||||||| | |||||||||||||||||||| |||||| |||| || || || | Sbjct: 1108 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1167 Query: 385 ggtgcacggaaagaaggtacagtcggtaaacctcttcc 422 |||||||| || | |||||| ||||| ||||| ||||| Sbjct: 1168 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1205 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1247 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1306 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1307 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1366 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1367 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1426 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1427 ttggaggatacaagttatctgccttagaaat 1457 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gtatttactggagttccaacagtgtacac 179 |||||||||||||||||||| ||||||| Sbjct: 934 gtatttactggagttccaaccatgtacac 962
>gb|AY084636.1| Arabidopsis thaliana clone 113798 mRNA, complete sequence Length = 1896 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 384 |||||||||||| | |||||||||||||||||||| |||||| |||| || || || | Sbjct: 1110 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1169 Query: 385 ggtgcacggaaagaaggtacagtcggtaaacctcttcc 422 |||||||| || | |||||| ||||| ||||| ||||| Sbjct: 1170 ggtgcacgaaaggcaggtactgtcggcaaaccgcttcc 1207 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1249 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1308 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1309 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1368 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1369 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1428 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1429 ttggaggatacaagttatctgccttagaaat 1459 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gtatttactggagttccaacagtgtacac 179 |||||||||||||||||||| ||||||| Sbjct: 936 gtatttactggagttccaaccatgtacac 964
>emb|BX823446.1|CNS0A5CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1920 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtc 371 |||||||||||| | |||||||||||||||||||| |||||| |||| Sbjct: 1149 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtc 1195 Score = 46.1 bits (23), Expect = 0.15 Identities = 164/211 (77%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 1289 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 1348 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 1349 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 1408 Query: 590 ctgtagacgaggatggatattttataattttagggcgcacaaatgctgacatcatgaaag 649 || || ||||||||||||| | ||| |||| || | | |||||||| ||||| | Sbjct: 1409 gagtggatgaggatggatattacgtgattctaggacgtaatagcgctgacattatgaagg 1468 Query: 650 ttggtggttacaagttatcagcattagaaat 680 |||| || ||||||||||| || |||||||| Sbjct: 1469 ttggaggatacaagttatctgccttagaaat 1499
>emb|CR751235.5| Zebrafish DNA sequence from clone CH211-240J22 in linkage group 4, complete sequence Length = 104632 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 641 tcatgaaagttggtggttacaagttatcagca 672 ||||||||||||||||||||||||| |||||| Sbjct: 12461 tcatgaaagttggtggttacaagttttcagca 12430
>gb|DQ455237.1| Medicago truncatula cDNA-AFLP fragment BC43M23_168 sequence Length = 247 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 331 ttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattg 381 ||||| || |||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 83 ttggagcgatatggcatgactgaatttgtcatggcgttgtcaaatccattg 133 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 ctaatgatgtgtggatcctcagcact 281 |||||||||||||||||||| ||||| Sbjct: 8 ctaatgatgtgtggatcctctgcact 33
>emb|CR848706.10| Zebrafish DNA sequence from clone CH211-113K17 in linkage group 7, complete sequence Length = 150558 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 337 cgctatggcatgactgagtttgtcatggcact 368 |||||||||||||||||| ||| ||||||||| Sbjct: 41834 cgctatggcatgactgagattggcatggcact 41803
>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5, complete sequence Length = 207800 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 643 atgaaagttggtggttacaagttatcagcatt 674 ||||||||||||||||||| ||| |||||||| Sbjct: 134076 atgaaagttggtggttacaggttttcagcatt 134107
>ref|XM_685690.1| PREDICTED: Danio rerio similar to AMP-dependent synthetase and ligase family member (5D567) (LOC562292), mRNA Length = 1740 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 337 cgctatggcatgactgagtttgtcatggcact 368 |||||||||||||||||| ||| ||||||||| Sbjct: 1084 cgctatggcatgactgagattggcatggcact 1115
>emb|AL954337.9| Zebrafish DNA sequence from clone CH211-223J10 in linkage group 19, complete sequence Length = 205289 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 337 cgctatggcatgactgagtttgtcatggcact 368 |||||||||||||||||| ||| ||||||||| Sbjct: 85601 cgctatggcatgactgagattggcatggcact 85570
>gb|AF243105.1|F243081S25 Homo sapiens intrinsic factor-vitamin B12 receptor (CUBN) gene, exons 37 and 38 Length = 2561 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 490 attaaaagtccatcccttttcaa 512 ||||||||||||||||||||||| Sbjct: 1623 attaaaagtccatcccttttcaa 1645
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 634 gctgacatcatgaaagttggtggttacaagttatcagcattagaaat 680 |||||||| ||||| ||||| || ||||||||||| || |||||||| Sbjct: 71651 gctgacattatgaaggttggaggatacaagttatctgccttagaaat 71697 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 325 cgtcttttggaacgctatggcatgactgag 354 |||||||||||| | ||||||||||||||| Sbjct: 71011 cgtcttttggaaagatatggcatgactgag 71040 Score = 42.1 bits (21), Expect = 2.4 Identities = 111/141 (78%) Strand = Plus / Plus Query: 470 atggagtcggtgagctctgtattaaaagtccatcccttttcaaagagtactggaaaagac 529 ||||||| |||||| | ||| ||||||| ||||| | ||||| ||||||||||| | Sbjct: 71392 atggagtgggtgagatatgtgttaaaagcccatctttgttcaaggagtactggaatcttc 71451 Query: 530 cagaggttactgcagaatcatttatcgatggtgggttcttcaagactggtgatactgtaa 589 ||||||| ||| ||||||||||| || | ||| | ||||||||| || ||| ||| || Sbjct: 71452 cagaggtgactaaagaatcatttacggaagatggatacttcaagacgggagatgctggaa 71511 Query: 590 ctgtagacgaggatggatatt 610 || || ||||||||||||| Sbjct: 71512 gagtggatgaggatggatatt 71532
>gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete sequence Length = 113746 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 cagtcggtaaacctcttccac 424 ||||||||||||||||||||| Sbjct: 108111 cagtcggtaaacctcttccac 108091
>emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chromosome 1q31.1-31.3, complete sequence Length = 158745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttta 621 ||||||||||||||||||||| Sbjct: 20690 gatggatattttataatttta 20670
>gb|AC092128.3| Homo sapiens chromosome 16 clone RP11-133M24, complete sequence Length = 202725 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 493 aaaagtccatcccttttcaaagagt 517 ||||||||||| ||||||||||||| Sbjct: 59437 aaaagtccatcacttttcaaagagt 59461
>gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, complete sequence Length = 192937 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 493 aaaagtccatcccttttcaaagagt 517 ||||||||||| ||||||||||||| Sbjct: 185117 aaaagtccatcacttttcaaagagt 185141
>emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on chromosome X, complete sequence Length = 91550 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 catgaaacggtgggaggaagtgaca 318 ||||||| ||||||||||||||||| Sbjct: 40744 catgaaagggtgggaggaagtgaca 40720
>ref|XM_472590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2130 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccaagggcaccagtaaaaatgatg 139 |||||| ||||||||||||||||| Sbjct: 751 ccaaggtcaccagtaaaaatgatg 774
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgatggtacagaaactaaag 469 |||||||||||||||||||| Sbjct: 2981885 tgatggtacagaaactaaag 2981904
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaaagtccatcccttttcaa 512 |||||||||||||||||||| Sbjct: 154423 aaaagtccatcccttttcaa 154442
>gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, complete sequence Length = 149061 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 108541 gatggatattttataatttt 108560
>gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, complete sequence Length = 157260 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 20012 gatggatattttataatttt 20031
>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence Length = 175034 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 43939 gatggatattttataatttt 43958
>gb|AC147119.2| Pan troglodytes BAC clone CH251-518N19 from Y, complete sequence Length = 241976 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 102979 gatggatattttataatttt 102998
>gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 177047 gatggatattttataatttt 177066
>gb|AC127249.4| Mus musculus BAC clone RP24-475B8 from chromosome 18, complete sequence Length = 137187 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aaaagtccatcccttttcaa 512 |||||||||||||||||||| Sbjct: 130539 aaaagtccatcccttttcaa 130520
>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete sequence Length = 212227 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 atggatattttataatttta 621 |||||||||||||||||||| Sbjct: 142166 atggatattttataatttta 142147
>gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, complete sequence Length = 188603 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 20898 gatggatattttataatttt 20879
>gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, complete sequence Length = 165128 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 139435 gatggatattttataatttt 139454
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aaaagtccatcccttttcaa 512 |||||||||||||||||||| Sbjct: 5903 aaaagtccatcccttttcaa 5884
>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence Length = 179390 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gatcctcagcactcccttct 288 |||||||||||||||||||| Sbjct: 62903 gatcctcagcactcccttct 62922
>gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, complete sequence Length = 196265 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gcaccagtaaaaatgatgag 141 |||||||||||||||||||| Sbjct: 22781 gcaccagtaaaaatgatgag 22800
>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence Length = 212954 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 209397 gatggatattttataatttt 209416
>emb|AL035064.1|SPAC1687 S.pombe chromosome I cosmid c1687 Length = 41757 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 tcattatggatgatggtacagaaa 463 ||||||||||||||| |||||||| Sbjct: 26679 tcattatggatgatgatacagaaa 26656
>gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chromosome y, complete sequence Length = 200911 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 3558 gatggatattttataatttt 3539
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 12563016 gatggatattttataatttt 12563035 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 11851774 gatggatattttataatttt 11851755 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 10482152 gatggatattttataatttt 10482133 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 10330924 gatggatattttataatttt 10330943 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 5341759 gatggatattttataatttt 5341740 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 3928520 gatggatattttataatttt 3928501 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 3867997 gatggatattttataatttt 3867978 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 2369420 gatggatattttataatttt 2369439 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 1679872 gatggatattttataatttt 1679853
>gb|AC091589.8| Homo sapiens chromosome 18, clone RP11-635B11, complete sequence Length = 177680 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 633 tgctgacatcatgaaagttg 652 |||||||||||||||||||| Sbjct: 50014 tgctgacatcatgaaagttg 50033
>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence Length = 143498 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 atggatattttataatttta 621 |||||||||||||||||||| Sbjct: 20910 atggatattttataatttta 20891
>gb|AC174482.4| Pan troglodytes BAC clone CH251-527O19 from chromosome y, complete sequence Length = 189332 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 50296 gatggatattttataatttt 50315
>gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromosome y, complete sequence Length = 212330 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 84439 gatggatattttataatttt 84458
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccaagggcaccagtaaaaatgatg 139 |||||| ||||||||||||||||| Sbjct: 21765282 ccaaggtcaccagtaaaaatgatg 21765259
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctcagcactcccttctcca 291 |||||||||||||||||||| Sbjct: 74029 cctcagcactcccttctcca 74048
>gb|AC146461.4| Pan troglodytes BAC clone CH251-49H18 from chromosome y, complete sequence Length = 170814 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 3490 gatggatattttataatttt 3471
>gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromosome y, complete sequence Length = 176384 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 150650 gatggatattttataatttt 150669
>gb|AC157526.2| Pan troglodytes BAC clone CH251-513A15 from chromosome unknown, complete sequence Length = 188881 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 662 agttatcagcattagaaatt 681 |||||||||||||||||||| Sbjct: 44500 agttatcagcattagaaatt 44481
>gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome 16, complete sequence Length = 194272 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 atggatattttataatttta 621 |||||||||||||||||||| Sbjct: 180912 atggatattttataatttta 180931
>gb|AC068726.5|AC068726 Homo sapiens chromosome 15 clone RP11-844G16 map 15q21.3, complete sequence Length = 189308 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 662 agttatcagcattagaaatt 681 |||||||||||||||||||| Sbjct: 64619 agttatcagcattagaaatt 64638
>gb|AC064863.5| Homo sapiens BAC clone RP11-392M11 from 2, complete sequence Length = 156289 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgggaggaagtgacatgcca 323 |||||||||||||||||||| Sbjct: 100565 tgggaggaagtgacatgcca 100546
>gb|AC146246.4| Pan troglodytes BAC clone clone CH251-154C4 from y, complete sequence Length = 149616 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 129614 gatggatattttataatttt 129595
>emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 in linkage group 8, complete sequence Length = 115792 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 599 aggatggatattttataattttag 622 |||||||||||||||| ||||||| Sbjct: 64141 aggatggatattttatgattttag 64164
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence Length = 136530 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 atggatattttataatttta 621 |||||||||||||||||||| Sbjct: 36651 atggatattttataatttta 36632
>dbj|AK068725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E14, full insert sequence Length = 2603 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccaagggcaccagtaaaaatgatg 139 |||||| ||||||||||||||||| Sbjct: 889 ccaaggtcaccagtaaaaatgatg 912
>gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chromosome y, complete sequence Length = 201209 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 130422 gatggatattttataatttt 130403
>gb|AC007794.1|AC007794 Homo sapiens chromosome 19, cosmid F17540, complete sequence Length = 39387 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 acaaatgctgacatcatgaa 647 |||||||||||||||||||| Sbjct: 16082 acaaatgctgacatcatgaa 16101
>gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chromosome y, complete sequence Length = 196073 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatggatattttataatttt 620 |||||||||||||||||||| Sbjct: 20747 gatggatattttataatttt 20766
>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence Length = 249808 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cctcagcactcccttctcca 291 |||||||||||||||||||| Sbjct: 7605 cctcagcactcccttctcca 7586
>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence Length = 148876 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aagcagctgagactaatgat 263 |||||||||||||||||||| Sbjct: 66753 aagcagctgagactaatgat 66734
>dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-838I13, complete sequence Length = 178982 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 601 gatggatattttataattttaggg 624 |||||||||||| ||||||||||| Sbjct: 161377 gatggatattttttaattttaggg 161354
>gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome 12, complete sequence Length = 236266 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gatcctcagcactcccttct 288 |||||||||||||||||||| Sbjct: 58876 gatcctcagcactcccttct 58857
>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete sequence Length = 233590 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tattaaaagtccatcccttt 508 |||||||||||||||||||| Sbjct: 112204 tattaaaagtccatcccttt 112185
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccaagggcaccagtaaaaatgatg 139 |||||| ||||||||||||||||| Sbjct: 76899 ccaaggtcaccagtaaaaatgatg 76876
>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence Length = 201839 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctcagcactcccttctcca 291 |||||||||||||||||||| Sbjct: 164650 cctcagcactcccttctcca 164669
>gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, complete sequence Length = 232876 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gcaccagtaaaaatgatgag 141 |||||||||||||||||||| Sbjct: 118059 gcaccagtaaaaatgatgag 118040
>gb|L29449.1|YSPPRKI Schizosaccharomyces pombe (clone: 16H3) protein kinase (skp1+) gene, complete cds Length = 2165 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 tcattatggatgatggtacagaaa 463 ||||||||||||||| |||||||| Sbjct: 220 tcattatggatgatgatacagaaa 197
>dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H9, complete sequence Length = 184057 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 601 gatggatattttataattttaggg 624 |||||||||||| ||||||||||| Sbjct: 64067 gatggatattttttaattttaggg 64044 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,212,576 Number of Sequences: 3902068 Number of extensions: 6212576 Number of successful extensions: 116685 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116290 Number of HSP's gapped (non-prelim): 393 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)