ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2p10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MIAA_STAES (Q8CQL3) tRNA delta(2)-isopentenylpyrophosphate trans... 28 7.2
2MIAA_STAEQ (Q5HPN8) tRNA delta(2)-isopentenylpyrophosphate trans... 28 7.2

>MIAA_STAES (Q8CQL3) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 332

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +3

Query: 180 VLLILSSAALTETIDAFRMHVDQYATNLLEWYLLVLKNICHAHCYNEEKERGLVGVSGIT 359
           V +I  + ++   ++  + H  QYA   L W+    KN  + H  N+E+    + +  IT
Sbjct: 253 VPVIKGNISMENAVEKLKQHSRQYAKRQLTWF----KNKMNVHWLNKERMSLQMMLDEIT 308

Query: 360 S*ISK 374
           + I+K
Sbjct: 309 TQINK 313



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>MIAA_STAEQ (Q5HPN8) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 332

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +3

Query: 180 VLLILSSAALTETIDAFRMHVDQYATNLLEWYLLVLKNICHAHCYNEEKERGLVGVSGIT 359
           V +I  + ++   ++  + H  QYA   L W+    KN  + H  N+E+    + +  IT
Sbjct: 253 VPVIKGNISMENAVEKLKQHSRQYAKRQLTWF----KNKMNVHWLNKERMSLQMMLDEIT 308

Query: 360 S*ISK 374
           + I+K
Sbjct: 309 TQINK 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,140,230
Number of Sequences: 219361
Number of extensions: 1217801
Number of successful extensions: 2519
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2518
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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