ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6) 161 1e-39
2HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4) 103 4e-22
3HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8) 73 4e-13
4HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9) 68 1e-11
5HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3) 62 7e-10
6HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1)... 57 4e-08
7HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2) 56 6e-08
8HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7) 52 7e-07
9HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1) 52 7e-07
10VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar is... 29 6.5

>HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6)|
          Length = 530

 Score =  161 bits (407), Expect = 1e-39
 Identities = 83/140 (59%), Positives = 98/140 (70%)
 Frame = +2

Query: 80  MNNSPVVHLKSLRTFCAFVATKLSYFAKSAQQSMKYSCQFICHTNPLFIQVTYFALISFA 259
           MN+  VV  K L+TF  F A+K S F KSAQ+S+KYS QFI   NPLF+ V YFALISFA
Sbjct: 1   MNHCLVVSHKKLQTFRTFAASKFSSFTKSAQKSIKYSFQFIYQNNPLFVHVAYFALISFA 60

Query: 260 GYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMXIGXE 439
           GY +LKVL  +DKSNTLKDL VLF              EME+FSS QLW+L ILM IG E
Sbjct: 61  GYGSLKVLKPRDKSNTLKDLDVLFTSVSASTVSSMATVEMEDFSSAQLWVLTILMLIGGE 120

Query: 440 VFTSILGLHFVRAKFNSXNS 499
           VFTS+LG+HF+RA+F +  S
Sbjct: 121 VFTSMLGIHFMRAEFGTKES 140



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>HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4)|
          Length = 552

 Score =  103 bits (256), Expect = 4e-22
 Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
 Frame = +2

Query: 92  PVVHLKSLRTFCAFVATKLSYFAKSAQQSMKYSCQF-ICHTNPLFIQVTYFALISFAGYE 268
           P ++ +  +  C F++ KL   A+    S+K S  F +C +NPL +Q+ YF +ISFAG+ 
Sbjct: 30  PRIYWEKAQHLCGFLSMKLISRARCVASSVKQSYSFLVCKSNPLVVQLVYFVIISFAGFL 89

Query: 269 ALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMXIGXEVFT 448
           ALK L  Q K    KDL +LF              EME+ S +QLW+L +LM +G EVFT
Sbjct: 90  ALKNLKPQGKPGP-KDLDLLFTSVSTLTVSSMATVEMEDLSDRQLWVLILLMLMGGEVFT 148

Query: 449 SILGLHFVRAKFNSXNSFNR 508
           S+LGL+F  A  N   +  R
Sbjct: 149 SMLGLYFNNANANRNENSQR 168



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>HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8)|
          Length = 554

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +2

Query: 197 FICHTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLK-DLXVLFXXXXXXXXXXXXXX 373
           F+ H +P ++Q+ YF  IS  G+  LK L  +        DL ++F              
Sbjct: 21  FLFHAHPFWLQLLYFLFISLLGFLMLKALPMKTSMVPRPMDLDLIFTSVSATTVSSMVAV 80

Query: 374 EMEEFSSKQLWILAILMXIGXEVFTSILGLHFVRAKFNS 490
           EME FS+ QL ++ +LM +G EVFTSILGL+F  AK++S
Sbjct: 81  EMESFSNSQLLLITLLMLLGGEVFTSILGLYFTNAKYSS 119



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>HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9)|
          Length = 509

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
 Frame = +2

Query: 143 KLSYFAKSAQQSMKYS---CQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTL 310
           +L  F  SA+ ++  S   C+FI  H +PL I ++YF +I   G+ AL VL   +     
Sbjct: 4   RLHIFVSSARHAINSSALICRFIAFHLSPLLIHLSYFLIIDVLGFVALVVLRPSNHKYNP 63

Query: 311 KDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMXIGXEVFTSILGLHFVRAKFNS 490
           + + + F              +ME+ SS Q+ +L +LM +G E+F S LGL    +K N 
Sbjct: 64  RYIDMFFLSTSAVTVTGLATTQMEDLSSSQIAVLTLLMFLGSEMFLSFLGLVLESSKQNK 123

Query: 491 XNSFNR 508
            +  NR
Sbjct: 124 HDPENR 129



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>HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3)|
          Length = 509

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +2

Query: 158 AKSAQQSMKYSCQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFX 334
           A+ A  S  + C+FI  H +PL I ++YF +I   G+ +L VL   +     + + + F 
Sbjct: 12  ARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNPRYVDMFFL 71

Query: 335 XXXXXXXXXXXXXEMEEFSSKQLWILAILMXIGXEVFTSILGLHFVRAKFNSXNSFNR 508
                        +ME+ SS Q+ IL +LM +  ++F S LGL    +K N  +  NR
Sbjct: 72  STSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSKQNKHDPENR 129



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>HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1) (Po-OsHKT1)|
          Length = 530

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
 Frame = +2

Query: 131 FVATKLSYFAKSAQQSMKY---SCQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDK 298
           F+  KL  F +  +  + +   + +FI  H +P +IQ++YF LIS  G   L  L   + 
Sbjct: 8   FIHNKLQSFGRIGRYFVNFVVLAHRFIALHIHPFWIQLSYFLLISILGSVLLMFLKPSNP 67

Query: 299 SNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMXIGXEVFTSILGL 463
                 + +LF              EME  SS Q+ ++ +LM +G EVF S LGL
Sbjct: 68  EFRPGYIDMLFLSTSALTLSSLITIEMEVLSSSQIVVITLLMLLGGEVFVSFLGL 122



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>HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2)|
          Length = 530

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 31/86 (36%), Positives = 41/86 (47%)
 Frame = +2

Query: 206 HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEE 385
           H +P +IQ++YF LIS  G   L  L           + +LF              EME 
Sbjct: 37  HVHPFWIQLSYFLLISILGSVLLMFLKPSSPEFKPGYIDMLFLSTSAMTVSGLSTIEMEV 96

Query: 386 FSSKQLWILAILMXIGXEVFTSILGL 463
            SS Q+ +L +LM +G EVF S LGL
Sbjct: 97  LSSSQIVVLTLLMLVGGEVFVSFLGL 122



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>HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7)|
          Length = 500

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 31/91 (34%), Positives = 43/91 (47%)
 Frame = +2

Query: 218 LFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSK 397
           L + V YF  IS  GY  L VL  ++     + +   F              EME FS+ 
Sbjct: 13  LSMHVAYFLAISCLGYGLLGVLKVREPGAAPRRIDRFFTAVSAATVSSMSTVEMEVFSNG 72

Query: 398 QLWILAILMXIGXEVFTSILGLHFVRAKFNS 490
           QL +L +LM +G EVF S++GL    +K  S
Sbjct: 73  QLVVLTVLMLLGGEVFVSLVGLASKWSKLRS 103



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>HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1)|
          Length = 506

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 29/82 (35%), Positives = 39/82 (47%)
 Frame = +2

Query: 221 FIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQ 400
           F+   YF   SF G+ ALK+   +  S    D  + F              +ME FS+ Q
Sbjct: 23  FLYFIYFLFFSFLGFLALKITKPRTTSRP-HDFDLFFTSVSAITVSSMSTVDMEVFSNTQ 81

Query: 401 LWILAILMXIGXEVFTSILGLH 466
           L  L ILM +G E+FTS L L+
Sbjct: 82  LIFLTILMFLGGEIFTSFLNLY 103



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>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC|
           3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a
           subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein
           1)
          Length = 839

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
 Frame = -3

Query: 450 EVNTSLPIXIKIAKIQSCL---LENSSISTVAMLETVDAETEVNNTXKSFRVFDLSWELR 280
           E+N  LP  +    + + +   + +  + T+A L  V  E ++N   +   +FD+++  R
Sbjct: 403 EINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKMKRG-EIFDMAFTGR 461

Query: 279 ---------TFRASYPANEIKAK*VTWIKSGFVWQMNWQE 187
                    +    +  N+I +K +T  KSG+ W  +W++
Sbjct: 462 YIILLMGVFSMYTGFLYNDIFSKTMTIFKSGWKWPDHWKK 501


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,819,735
Number of Sequences: 219361
Number of extensions: 1225351
Number of successful extensions: 2691
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2689
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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