ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2o10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190058.1| Oryza sativa (japonica cultivar-group), predic... 398 e-108
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
3dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
4gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21... 48 0.026
5ref|XM_588684.2| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
6ref|XM_880928.1| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
7ref|XM_880908.1| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
8ref|XM_880891.1| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
9ref|XM_880872.1| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
10ref|XM_880833.1| PREDICTED: Bos taurus similar to sperm protein ... 44 0.41
11ref|XM_420103.1| PREDICTED: Gallus gallus similar to Transcript ... 44 0.41
12ref|XM_548202.2| PREDICTED: Canis familiaris similar to sperm pr... 44 0.41
13gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park C... 44 0.41
14emb|CR524263.1| Gallus gallus finished cDNA, clone ChEST1007j1 44 0.41
15gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 44 0.41
16gb|AE005053.1| Halobacterium sp. NRC-1 section 84 of 170 of the ... 44 0.41
17dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.41
18dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.41
19emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 44 0.41
20gb|AE006788.1| Sulfolobus solfataricus P2 section 147 of 272 of ... 42 1.6
21gb|AY438568.1| Rattus norvegicus sperm protein SSP411 mRNA, comp... 42 1.6
22ref|NM_199402.1| Rattus norvegicus spermatogenesis associated 20... 42 1.6
23ref|XM_967756.1| PREDICTED: Tribolium castaneum similar to CG487... 42 1.6
24ref|XM_793431.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.6
25gb|AC128795.1| Homo sapiens 12 BAC RP11-181D11 (Roswell Park Can... 42 1.6
26gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442... 42 1.6
27gb|AE000657.1| Aquifex aeolicus VF5, complete genome 42 1.6
28ref|NM_116556.3| Arabidopsis thaliana unknown protein AT4G03200 ... 40 6.3
29gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome... 40 6.3
30gb|AC164622.3| Mus musculus BAC clone CH36-287E13 from chromosom... 40 6.3
31gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.3
32ref|XM_424262.1| PREDICTED: Gallus gallus similar to spectrin, b... 40 6.3
33gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, co... 40 6.3
34gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosom... 40 6.3
35gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosom... 40 6.3
36gb|BT010343.1| Arabidopsis thaliana At4g03200 mRNA, complete cds 40 6.3
37gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 6.3
38emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chr... 40 6.3
39emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on ch... 40 6.3
40emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.3
41emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.3
42gb|AY062530.1| Arabidopsis thaliana predicted protein of unknown... 40 6.3
43gb|AC137735.5| Homo sapiens chromosome 17, clone CTD-2582D11, co... 40 6.3
44gb|AC021867.19| Homo sapiens 3 BAC RP11-220G20 (Roswell Park Can... 40 6.3
45gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
46gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete... 40 6.3 
>ref|NM_190058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2406

 Score =  398 bits (201), Expect = e-108
 Identities = 390/454 (85%), Gaps = 1/454 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gctggcatgttcc-cattttgagaagatgctgtacgaccagggacaaatagccaatgcat 59
            |||||||||| || ||||||||||||||| |||||||||| ||||| ||||| |||| ||
Sbjct: 1076 gctggcatgtcccgcattttgagaagatgttgtacgaccaaggacagatagctaatgtat 1135

                                                                        
Query: 60   acttggatacatatgttatcacaggagacgagtattattcttcagttgcacgtgatatac 119
            |  | ||||||| | | ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 1136 atctagatacatttctgatcacgggagatgagtattattcttcagttgcacgtgatatac 1195

                                                                        
Query: 120  ttgattacttgaggagagacatgattggagaagatggtgaaattttctcagcagaagatg 179
            ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 1196 ttgattacttgaggagagacatgatcggagaagaaggtgaaatttactcagcagaagatg 1255

                                                                        
Query: 180  ctgacagtgcagaatatgaaggtgatgcaagnnnnnnngagggttctttctatgtgtgga 239
            |||| |||||||||||||| |||| | ||||       |||||  |||||||||||||||
Sbjct: 1256 ctgatagtgcagaatatgatggtgctccaagaaaaagggagggagctttctatgtgtgga 1315

                                                                        
Query: 240  caagtcaagagatcgaagacacacttggggagaacgcggagctgttcaagaaccactact 299
            | | | | ||||| ||||||||||||||||||||  | ||||| |||||||| || ||||
Sbjct: 1316 ctaataaggagattgaagacacacttggggagaattcagagctattcaagaatcattact 1375

                                                                        
Query: 300  atgttaaatcgtctggcaactgtgacctatcggggatgagtgatcctcacaacgagttca 359
            |||| ||||| |||||||| || ||||| ||| ||||||||||||||||| | |||||||
Sbjct: 1376 atgtcaaatcatctggcaattgcgacctttcgcggatgagtgatcctcacgatgagttca 1435

                                                                        
Query: 360  gtggtaaaaatgtattaatagaaagaaaaccgggttcattgatggcatcgaagtatggca 419
              |||||||||||  |||||||||||||||  | ||| ||||||||||| |||| |||||
Sbjct: 1436 agggtaaaaatgtgctaatagaaagaaaacaagcttctttgatggcatcaaagtgtggca 1495

                                              
Query: 420  agtctgttgatgaatattatggaatcctggggga 453
            |||||||||||||||||  |  ||||||||||||
Sbjct: 1496 agtctgttgatgaatatgctcaaatcctggggga 1529
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  234 bits (118), Expect = 2e-58
 Identities = 172/190 (90%)
 Strand = Plus / Minus

                                                                            
Query: 14       cattttgagaagatgctgtacgaccagggacaaatagccaatgcatacttggatacatat 73
                ||||||||||||||| |||||||||| ||||| ||||| |||| |||  | ||||||| |
Sbjct: 41062649 cattttgagaagatgttgtacgaccaaggacagatagctaatgtatatctagatacattt 41062590

                                                                            
Query: 74       gttatcacaggagacgagtattattcttcagttgcacgtgatatacttgattacttgagg 133
                 | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41062589 ctgatcacgggagatgagtattattcttcagttgcacgtgatatacttgattacttgagg 41062530

                                                                            
Query: 134      agagacatgattggagaagatggtgaaattttctcagcagaagatgctgacagtgcagaa 193
                ||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 41062529 agagacatgatcggagaagaaggtgaaatttactcagcagaagatgctgatagtgcagaa 41062470

                          
Query: 194      tatgaaggtg 203
                ||||| ||||
Sbjct: 41062469 tatgatggtg 41062460



 Score =  176 bits (89), Expect = 4e-41
 Identities = 176/205 (85%)
 Strand = Plus / Minus

                                                                            
Query: 249      agatcgaagacacacttggggagaacgcggagctgttcaagaaccactactatgttaaat 308
                |||| ||||||||||||||||||||  | ||||| |||||||| || |||||||| ||||
Sbjct: 41061963 agattgaagacacacttggggagaattcagagctattcaagaatcattactatgtcaaat 41061904

                                                                            
Query: 309      cgtctggcaactgtgacctatcggggatgagtgatcctcacaacgagttcagtggtaaaa 368
                | |||||||| || ||||| ||| ||||||||||||||||| | |||||||  |||||||
Sbjct: 41061903 catctggcaattgcgacctttcgcggatgagtgatcctcacgatgagttcaagggtaaaa 41061844

                                                                            
Query: 369      atgtattaatagaaagaaaaccgggttcattgatggcatcgaagtatggcaagtctgttg 428
                ||||  |||||||||||||||  | ||| ||||||||||| |||| ||||||||||||||
Sbjct: 41061843 atgtgctaatagaaagaaaacaagcttctttgatggcatcaaagtgtggcaagtctgttg 41061784

                                         
Query: 429      atgaatattatggaatcctggggga 453
                ||||||||  |  ||||||||||||
Sbjct: 41061783 atgaatatgctcaaatcctggggga 41061759
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>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0492G09
          Length = 142239

 Score =  234 bits (118), Expect = 2e-58
 Identities = 172/190 (90%)
 Strand = Plus / Minus

                                                                         
Query: 14    cattttgagaagatgctgtacgaccagggacaaatagccaatgcatacttggatacatat 73
             ||||||||||||||| |||||||||| ||||| ||||| |||| |||  | ||||||| |
Sbjct: 99579 cattttgagaagatgttgtacgaccaaggacagatagctaatgtatatctagatacattt 99520

                                                                         
Query: 74    gttatcacaggagacgagtattattcttcagttgcacgtgatatacttgattacttgagg 133
              | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99519 ctgatcacgggagatgagtattattcttcagttgcacgtgatatacttgattacttgagg 99460

                                                                         
Query: 134   agagacatgattggagaagatggtgaaattttctcagcagaagatgctgacagtgcagaa 193
             ||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 99459 agagacatgatcggagaagaaggtgaaatttactcagcagaagatgctgatagtgcagaa 99400

                       
Query: 194   tatgaaggtg 203
             ||||| ||||
Sbjct: 99399 tatgatggtg 99390



 Score =  176 bits (89), Expect = 4e-41
 Identities = 176/205 (85%)
 Strand = Plus / Minus

                                                                         
Query: 249   agatcgaagacacacttggggagaacgcggagctgttcaagaaccactactatgttaaat 308
             |||| ||||||||||||||||||||  | ||||| |||||||| || |||||||| ||||
Sbjct: 98893 agattgaagacacacttggggagaattcagagctattcaagaatcattactatgtcaaat 98834

                                                                         
Query: 309   cgtctggcaactgtgacctatcggggatgagtgatcctcacaacgagttcagtggtaaaa 368
             | |||||||| || ||||| ||| ||||||||||||||||| | |||||||  |||||||
Sbjct: 98833 catctggcaattgcgacctttcgcggatgagtgatcctcacgatgagttcaagggtaaaa 98774

                                                                         
Query: 369   atgtattaatagaaagaaaaccgggttcattgatggcatcgaagtatggcaagtctgttg 428
             ||||  |||||||||||||||  | ||| ||||||||||| |||| ||||||||||||||
Sbjct: 98773 atgtgctaatagaaagaaaacaagcttctttgatggcatcaaagtgtggcaagtctgttg 98714

                                      
Query: 429   atgaatattatggaatcctggggga 453
             ||||||||  |  ||||||||||||
Sbjct: 98713 atgaatatgctcaaatcctggggga 98689
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>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                         
Query: 263   cttggggagaacgcggagctgttcaagaaccactactatgttaaatcgtctggcaactgt 322
             ||||||||||| || || || |||||| | || |||||||||||   ||| || ||||| 
Sbjct: 75847 cttggggagaatgcagatcttttcaaggagcattactatgttaagaagtcaggtaactgc 75906

                                                 
Query: 323   gacctatcggggatgagtgatcctcacaacgagttc 358
             ||||| ||  | ||||||||||| ||||||||||||
Sbjct: 75907 gacctctcaagcatgagtgatccgcacaacgagttc 75942



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 119   cttgattacttgaggagagacatgattg 146
             ||||||||  ||||||||||||||||||
Sbjct: 75278 cttgattatctgaggagagacatgattg 75305
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>ref|XM_588684.2| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
            variant 1 (LOC511363), mRNA
          Length = 2570

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 12   cccattttgagaagatgctgtacgaccagg 41
            |||| ||||||||||||||||| |||||||
Sbjct: 1012 cccactttgagaagatgctgtatgaccagg 1041
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>ref|XM_880928.1| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
           variant 7 (LOC511363), mRNA
          Length = 2450

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 12  cccattttgagaagatgctgtacgaccagg 41
           |||| ||||||||||||||||| |||||||
Sbjct: 892 cccactttgagaagatgctgtatgaccagg 921
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>ref|XM_880908.1| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
           variant 6 (LOC511363), mRNA
          Length = 1995

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 12  cccattttgagaagatgctgtacgaccagg 41
           |||| ||||||||||||||||| |||||||
Sbjct: 437 cccactttgagaagatgctgtatgaccagg 466
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>ref|XM_880891.1| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
            variant 5 (LOC511363), mRNA
          Length = 2633

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 12   cccattttgagaagatgctgtacgaccagg 41
            |||| ||||||||||||||||| |||||||
Sbjct: 1012 cccactttgagaagatgctgtatgaccagg 1041
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>ref|XM_880872.1| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
            variant 4 (LOC511363), mRNA
          Length = 1754

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 12   cccattttgagaagatgctgtacgaccagg 41
            |||| ||||||||||||||||| |||||||
Sbjct: 1012 cccactttgagaagatgctgtatgaccagg 1041
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>ref|XM_880833.1| PREDICTED: Bos taurus similar to sperm protein SSP411, transcript
            variant 2 (LOC511363), mRNA
          Length = 2587

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 12   cccattttgagaagatgctgtacgaccagg 41
            |||| ||||||||||||||||| |||||||
Sbjct: 1029 cccactttgagaagatgctgtatgaccagg 1058
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>ref|XM_420103.1| PREDICTED: Gallus gallus similar to Transcript increased in
            spermiogenesis 78 (LOC422100), mRNA
          Length = 4081

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 17   tttgagaagatgctgtacgaccaggg 42
            ||||||||||||||||| ||||||||
Sbjct: 2143 tttgagaagatgctgtatgaccaggg 2168
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>ref|XM_548202.2| PREDICTED: Canis familiaris similar to sperm protein SSP411
            (LOC491082), mRNA
          Length = 2599

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 12   cccattttgagaagatgctgtacgaccagg 41
            |||| ||||||||||||||||| |||||||
Sbjct: 1038 cccactttgagaagatgctgtatgaccagg 1067
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>gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 120628

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 145   tggagaagatggtgaaattttc 166
             ||||||||||||||||||||||
Sbjct: 30121 tggagaagatggtgaaattttc 30142
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>emb|CR524263.1| Gallus gallus finished cDNA, clone ChEST1007j1
          Length = 1622

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 17  tttgagaagatgctgtacgaccaggg 42
           ||||||||||||||||| ||||||||
Sbjct: 138 tttgagaagatgctgtatgaccaggg 163
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>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
              gene, partial cds; and RST and OAT4 genes, complete cds,
              complete sequence
          Length = 170114

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 145    tggagaagatggtgaaattttc 166
              ||||||||||||||||||||||
Sbjct: 140835 tggagaagatggtgaaattttc 140856
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>gb|AE005053.1| Halobacterium sp. NRC-1 section 84 of 170 of the complete genome
          Length = 11842

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 20   gagaagatgctgtacgaccagg 41
            ||||||||||||||||||||||
Sbjct: 3188 gagaagatgctgtacgaccagg 3167
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>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
             sequence
          Length = 160739

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 145   tggagaagatggtgaaattttc 166
             ||||||||||||||||||||||
Sbjct: 20093 tggagaagatggtgaaattttc 20072
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>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
             sequence
          Length = 169259

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 145   tggagaagatggtgaaattttc 166
             ||||||||||||||||||||||
Sbjct: 60071 tggagaagatggtgaaattttc 60050
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 12      cccattttgagaagatgctgtacgaccagg 41
               |||| |||||||||||||| ||||||||||
Sbjct: 3130368 cccactttgagaagatgctctacgaccagg 3130339
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>gb|AE006788.1| Sulfolobus solfataricus P2 section 147 of 272 of the complete genome
          Length = 10565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 142  gattggagaagatggtgaaat 162
            |||||||||||||||||||||
Sbjct: 6317 gattggagaagatggtgaaat 6337
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>gb|AY438568.1| Rattus norvegicus sperm protein SSP411 mRNA, complete cds
          Length = 2598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 17   tttgagaagatgctgtacgaccagg 41
            ||||||||||||||||| |||||||
Sbjct: 1062 tttgagaagatgctgtatgaccagg 1086
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>ref|NM_199402.1| Rattus norvegicus spermatogenesis associated 20 (Spata20), mRNA
          Length = 2598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 17   tttgagaagatgctgtacgaccagg 41
            ||||||||||||||||| |||||||
Sbjct: 1062 tttgagaagatgctgtatgaccagg 1086
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>ref|XM_967756.1| PREDICTED: Tribolium castaneum similar to CG4878-PB, isoform B
           (LOC661605), mRNA
          Length = 2106

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 124 ttacttgaggagagacatgattgga 148
           ||||||||||||||||||| |||||
Sbjct: 622 ttacttgaggagagacatgcttgga 646
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>ref|XM_793431.1| PREDICTED: Strongylocentrotus purpuratus similar to sperm protein
           SSP411 (LOC593977), mRNA
          Length = 2067

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 17  tttgagaagatgctgtacgaccagggaca 45
           ||||||||||||||||| || ||||||||
Sbjct: 697 tttgagaagatgctgtatgatcagggaca 725
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>gb|AC128795.1| Homo sapiens 12 BAC RP11-181D11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 23870

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 152  gatggtgaaattttctcagca 172
            |||||||||||||||||||||
Sbjct: 3794 gatggtgaaattttctcagca 3814
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>gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442P12, complete sequence
          Length = 206631

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 41     ggacaaatagccaatgcatacttgg 65
              ||||||||||| |||||||||||||
Sbjct: 117184 ggacaaatagctaatgcatacttgg 117160
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 17      tttgagaagatgctgtacgaccagg 41
               |||||||||||||| ||||||||||
Sbjct: 1513386 tttgagaagatgctctacgaccagg 1513410
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>ref|NM_116556.3| Arabidopsis thaliana unknown protein AT4G03200 mRNA, complete cds
          Length = 2784

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 3    tggcatgttcc-cattttgagaagatgctgta 33
            ||||||||||| ||||||||||| ||||||||
Sbjct: 1179 tggcatgttccacattttgagaaaatgctgta 1210
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>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence
          Length = 224330

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 354    agttcagtggtaaaaatgtattaataga 381
              ||||| ||||||||||| ||||||||||
Sbjct: 219258 agttctgtggtaaaaatatattaataga 219231
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>gb|AC164622.3| Mus musculus BAC clone CH36-287E13 from chromosome 13, complete
             sequence
          Length = 174691

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 354   agttcagtggtaaaaatgtattaataga 381
             ||||| ||||||||||| ||||||||||
Sbjct: 44017 agttctgtggtaaaaatatattaataga 44044
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 14      cattttgagaagatgctgtacgac 37
               ||||| ||||||||||||||||||
Sbjct: 1208663 catttcgagaagatgctgtacgac 1208686
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>ref|XM_424262.1| PREDICTED: Gallus gallus similar to spectrin, beta, erythrocytic
            (includes spherocytosis, clinical type I); Spectrin,
            beta, erythrocytic; spectrin, beta, erythrocytic
            (includes sperocytosis, clinical type I) (LOC426633),
            partial mRNA
          Length = 3632

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  agaagatgctgacagtgcag 191
            ||||||||||||||||||||
Sbjct: 1733 agaagatgctgacagtgcag 1752
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>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence
          Length = 196560

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    aaatgtattaatagaaagaa 386
              ||||||||||||||||||||
Sbjct: 119319 aaatgtattaatagaaagaa 119338
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>gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosome 18, complete
             sequence
          Length = 204727

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   taaaaatgtattaatagaaa 383
             ||||||||||||||||||||
Sbjct: 69120 taaaaatgtattaatagaaa 69101
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>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   tgtgacctatcggggatgag 339
             ||||||||||||||||||||
Sbjct: 18563 tgtgacctatcggggatgag 18582
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>gb|BT010343.1| Arabidopsis thaliana At4g03200 mRNA, complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 3   tggcatgttcc-cattttgagaagatgctgta 33
           ||||||||||| ||||||||||| ||||||||
Sbjct: 856 tggcatgttccacattttgagaaaatgctgta 887
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 14     cattttgagaagatgctgtacgaccagg 41
              ||||| |||||||||||||| |||||||
Sbjct: 546518 catttcgagaagatgctgtatgaccagg 546491
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>emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chromosome 13 Contains a
             novel gene, the IRS2 gene for insulin receptor substrate 2
             and two CpG islands, complete sequence
          Length = 143409

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 172   agaagatgctgacagtgcagaatatgaa 199
             |||| |||||| ||||||||||||||||
Sbjct: 61296 agaatatgctgccagtgcagaatatgaa 61269
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>emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on chromosome 9 Contains the
             5' end of a novel gene (MGC20553), complete sequence
          Length = 145676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   agcagaagatgctgacagtgcaga 192
             ||||||||| ||||||||||||||
Sbjct: 23628 agcagaagaggctgacagtgcaga 23605
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     cattttgagaagatgctgtacgac 37
              ||||| ||||||||||||||||||
Sbjct: 174641 catttcgagaagatgctgtacgac 174664
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     cattttgagaagatgctgtacgac 37
              ||||| ||||||||||||||||||
Sbjct: 222788 catttcgagaagatgctgtacgac 222811
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>gb|AY062530.1| Arabidopsis thaliana predicted protein of unknown function
            (At4g03200; F4C21.12) mRNA, complete cds
          Length = 2560

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 3    tggcatgttcc-cattttgagaagatgctgta 33
            ||||||||||| ||||||||||| ||||||||
Sbjct: 1034 tggcatgttccacattttgagaaaatgctgta 1065
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>gb|AC137735.5| Homo sapiens chromosome 17, clone CTD-2582D11, complete sequence
          Length = 169483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    tggagaagatggtgaaattt 164
              ||||||||||||||||||||
Sbjct: 128380 tggagaagatggtgaaattt 128399
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>gb|AC021867.19| Homo sapiens 3 BAC RP11-220G20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146809

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gagacatgattggagaagat 154
             ||||||||||||||||||||
Sbjct: 72368 gagacatgattggagaagat 72349
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 14      cattttgagaagatgctgtacgac 37
               ||||| ||||||||||||||||||
Sbjct: 3043312 catttcgagaagatgctgtacgac 3043289
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>gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete sequence
          Length = 181220

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    tgtgacctatcggggatgag 339
              ||||||||||||||||||||
Sbjct: 162407 tgtgacctatcggggatgag 162426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,455,327
Number of Sequences: 3902068
Number of extensions: 4455327
Number of successful extensions: 90646
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 90507
Number of HSP's gapped (non-prelim): 141
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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