>gb|AC002507.1|AC002507 Human Cosmid g5129z132 from 7q31.3, complete sequence
          Length = 41763

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 77    ttgacttcatctttcctgatttg 99
             |||||||||||||||||||||||
Sbjct: 14306 ttgacttcatctttcctgatttg 14328

>ref|XM_510500.1| PREDICTED: Pan troglodytes similar to serologically defined breast
            cancer antigen NY-BR-20 (LOC453534), mRNA
          Length = 2253

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 595  cttctatagttgggtaatgttg 616
            ||||||||||||||||||||||
Sbjct: 2143 cttctatagttgggtaatgttg 2122

>ref|NM_001031733.1| Homo sapiens calmodulin-like 4 (CALML4), transcript variant 1, mRNA
          Length = 731

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 595 cttctatagttgggtaatgttg 616
           ||||||||||||||||||||||
Sbjct: 630 cttctatagttgggtaatgttg 609

>ref|NM_033429.1| Homo sapiens calmodulin-like 4 (CALML4), transcript variant 2, mRNA
          Length = 3914

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 595  cttctatagttgggtaatgttg 616
            ||||||||||||||||||||||
Sbjct: 1094 cttctatagttgggtaatgttg 1073

>gb|BC009516.2| Homo sapiens calmodulin-like 4, transcript variant 1, mRNA (cDNA
           clone MGC:4809 IMAGE:3546033), complete cds
          Length = 731

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 595 cttctatagttgggtaatgttg 616
           ||||||||||||||||||||||
Sbjct: 630 cttctatagttgggtaatgttg 609

>gb|AF308287.1| Homo sapiens serologically defined breast cancer antigen NY-BR-20
           mRNA, partial cds
          Length = 984

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 595 cttctatagttgggtaatgttg 616
           ||||||||||||||||||||||
Sbjct: 902 cttctatagttgggtaatgttg 881

>emb|BX640702.1|HSM806772 Homo sapiens mRNA; cDNA DKFZp686A09136 (from clone DKFZp686A09136)
          Length = 3722

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 595 cttctatagttgggtaatgttg 616
           ||||||||||||||||||||||
Sbjct: 471 cttctatagttgggtaatgttg 450

>gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, complete sequence
          Length = 171605

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 595   cttctatagttgggtaatgttg 616
             ||||||||||||||||||||||
Sbjct: 82525 cttctatagttgggtaatgttg 82546

>dbj|AK092628.1| Homo sapiens cDNA FLJ35309 fis, clone PROST2010219, weakly similar
           to CALMODULIN
          Length = 2364

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 595 cttctatagttgggtaatgttg 616
           ||||||||||||||||||||||
Sbjct: 535 cttctatagttgggtaatgttg 514

>emb|CR598967.1| full-length cDNA clone CS0DE008YB01 of Placenta of Homo sapiens
            (human)
          Length = 1445

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 595  cttctatagttgggtaatgttg 616
            ||||||||||||||||||||||
Sbjct: 1362 cttctatagttgggtaatgttg 1341

>gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, complete sequence
          Length = 173919

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 595    cttctatagttgggtaatgttg 616
              ||||||||||||||||||||||
Sbjct: 142777 cttctatagttgggtaatgttg 142756

>emb|BX640817.1|HSM806927 Homo sapiens mRNA; cDNA DKFZp686D05174 (from clone DKFZp686D05174)
          Length = 3914

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 595  cttctatagttgggtaatgttg 616
            ||||||||||||||||||||||
Sbjct: 1094 cttctatagttgggtaatgttg 1073

>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
             Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    tttcttctcttgacttcatct 88
             |||||||||||||||||||||
Sbjct: 42878 tttcttctcttgacttcatct 42898

>gb|AC155724.8| Mus musculus 6 BAC RP24-132K20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 196715

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     gggctttctggaaggtgcctt 42
              |||||||||||||||||||||
Sbjct: 106966 gggctttctggaaggtgcctt 106946

>gb|M28072.1|RABMCP1AA Rabbit macrophage cationic peptide 1 (MCP-1) gene, complete cds
          Length = 2097

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 436 gatctcttgaagaagcttctgttgt 460
           ||||||||||||||||| |||||||
Sbjct: 857 gatctcttgaagaagctgctgttgt 833

>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 85     atctttcctgatttgctttgaaca 108
              ||||||||||||| ||||||||||
Sbjct: 201405 atctttcctgattagctttgaaca 201382

>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence
          Length = 244558

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     tcttgacttcatctttcctg 94
              ||||||||||||||||||||
Sbjct: 200768 tcttgacttcatctttcctg 200749

>emb|CR858183.1| Pongo pygmaeus mRNA; cDNA DKFZp469K138 (from clone DKFZp469K138)
          Length = 6900

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 77   ttgacttcatctttcctgatttgc 100
            ||||||||||| ||||||||||||
Sbjct: 4434 ttgacttcatccttcctgatttgc 4457

>gb|AC015871.7| Homo sapiens chromosome 15, clone RP11-81A1, complete sequence
          Length = 151128

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    atggggtttcttctcttgac 81
             ||||||||||||||||||||
Sbjct: 52197 atggggtttcttctcttgac 52216

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    gcacttcctagacattgttt 130
              ||||||||||||||||||||
Sbjct: 636382 gcacttcctagacattgttt 636401

>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete
             sequence
          Length = 215113

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    atctttcctgatttgctttgaaca 108
             ||||||||||||| ||||||||||
Sbjct: 78632 atctttcctgattagctttgaaca 78655

>gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185259

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   agccatcaaaatatgtcgta 569
             ||||||||||||||||||||
Sbjct: 98057 agccatcaaaatatgtcgta 98076

>ref|XM_624045.1| PREDICTED: Apis mellifera similar to casein kinase II beta subunit
           (LOC551655), mRNA
          Length = 718

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 aacctgatgatgaattggat 347
           ||||||||||||||||||||
Sbjct: 222 aacctgatgatgaattggat 241

>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence
          Length = 177047

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ttctgttgtcttagatgctt 471
             ||||||||||||||||||||
Sbjct: 93155 ttctgttgtcttagatgctt 93174

>gb|AC019211.6| Homo sapiens BAC clone RP11-454J11 from 2, complete sequence
          Length = 167471

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 633    aaagaggttagggattattg 652
              ||||||||||||||||||||
Sbjct: 102822 aaagaggttagggattattg 102841

>dbj|AB008270.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG13
          Length = 50641

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 332  tgatgatgaattggattggtggat 355
            ||||||||||| ||||||||||||
Sbjct: 8818 tgatgatgaataggattggtggat 8795

>emb|AL732611.21| Mouse DNA sequence from clone RP23-135A21 on chromosome 4, complete
             sequence
          Length = 143036

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 468   gctttgtgcttgtagcattgattg 491
             ||||||||||| ||||||||||||
Sbjct: 37470 gctttgtgcttttagcattgattg 37447

>gb|M28073.1|RABMCP1AB Rabbit macrophage cationic peptide 2 (MCP-2) gene, complete cds
          Length = 2133

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 439 ctcttgaagaagcttctgttgtct 462
           ||||||||||| ||||||||||||
Sbjct: 860 ctcttgaagaaacttctgttgtct 837


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,309,693
Number of Sequences: 3902068
Number of extensions: 6309693
Number of successful extensions: 114140
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114067
Number of HSP's gapped (non-prelim): 73
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)