ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full ... 172 1e-40
2ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predic... 76 2e-11
3emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 76 2e-11
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-11
5dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-11
6dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-11
7dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-11
8emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 76 2e-11
9gb|BT016789.1| Zea mays clone Contig622 mRNA sequence 72 3e-10
10gb|AY103944.1| Zea mays PCO133356 mRNA sequence 44 0.063
11gb|AC109193.16| Mus musculus chromosome 5, clone RP24-352I22, co... 40 0.98
12gb|BC070956.1| Rattus norvegicus cyclin-dependent kinase 4, mRNA... 38 3.9
13gb|BC046336.1| Mus musculus cyclin-dependent kinase 4, mRNA (cDN... 38 3.9
14ref|NM_009870.2| Mus musculus cyclin-dependent kinase 4 (Cdk4), ... 38 3.9
15ref|XM_917659.2| PREDICTED: Mus musculus similar to Cell divisio... 38 3.9
16gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, co... 38 3.9
17gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, c... 38 3.9
18gb|BC063158.1| Rattus norvegicus cyclin-dependent kinase 4, mRNA... 38 3.9
19gb|BC031599.1| Mus musculus mRNA similar to cyclin-dependent kin... 38 3.9
20emb|AL445623.2|HS315I14 Homo sapiens chromosome 9 BAC RP11-315I1... 38 3.9
21gb|BC052694.1| Mus musculus cyclin-dependent kinase 4, mRNA (cDN... 38 3.9
22dbj|AK146107.1| Mus musculus 14 days pregnant adult female place... 38 3.9
23dbj|AK153465.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 38 3.9
24ref|NM_053593.2| Rattus norvegicus cyclin-dependent kinase 4 (Cd... 38 3.9
25dbj|AK003804.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 38 3.9
26dbj|AK019380.1| Mus musculus 12 days embryo head cDNA, RIKEN ful... 38 3.9
27dbj|AK012064.1| Mus musculus 10 days embryo whole body cDNA, RIK... 38 3.9
28dbj|AK011871.1| Mus musculus 10 days embryo whole body cDNA, RIK... 38 3.9
29dbj|AK078440.1| Mus musculus 12 days embryo male wolffian duct i... 38 3.9
30dbj|AK006918.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 3.9
31dbj|AK185090.1| Mus musculus cDNA, clone:Y0G0132J11, strand:plus... 38 3.9
32gb|AF223390.1|AF223390 Mus musculus cyclin dependent kinase 4 (C... 38 3.9
33gb|AC154762.2| Mus musculus BAC clone RP24-418J10 from 16, compl... 38 3.9
34emb|CT573093.3| CH250-1K10, complete sequence 38 3.9
35gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, comple... 38 3.9
36gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, compl... 38 3.9
37emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L1... 38 3.9
38gb|L11007.1|RATCDK4X Rattus norvegicus cyclin-dependent kinase 4... 38 3.9
39gb|L01640.1|MUSG1CYC Mus musculus D-type G1 cyclin catalytic sub... 38 3.9 
>gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full insert mRNA
           sequence
          Length = 844

 Score =  172 bits (87), Expect = 1e-40
 Identities = 89/90 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 580 atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaattggaa 521

                                         
Query: 61  ctctcacatctgcccttgcaaatgctactc 90
           ||||||||||||||||||||||||||||||
Sbjct: 520 ctctcacatctgcccttgcaaatgctactc 491
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>ref|XM_473087.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1980

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
            ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 1631 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 1687

                                       
Query: 61   ctctcacatctgcccttgcaaatgcta 87
            | || || |||||||||||||||||||
Sbjct: 1688 cgctgacttctgcccttgcaaatgcta 1714
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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                         
Query: 1     atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
             ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 52759 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 52703

                                        
Query: 61    ctctcacatctgcccttgcaaatgcta 87
             | || || |||||||||||||||||||
Sbjct: 52702 cgctgacttctgcccttgcaaatgcta 52676
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
                ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 25171092 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 25171036

                                           
Query: 61       ctctcacatctgcccttgcaaatgcta 87
                | || || |||||||||||||||||||
Sbjct: 25171035 cgctgacttctgcccttgcaaatgcta 25171009
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>dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B03, full
           insert sequence
          Length = 1647

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
           ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 475 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 531

                                      
Query: 61  ctctcacatctgcccttgcaaatgcta 87
           | || || |||||||||||||||||||
Sbjct: 532 cgctgacttctgcccttgcaaatgcta 558
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>dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B11, full
           insert sequence
          Length = 1050

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
           ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 425 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 481

                                      
Query: 61  ctctcacatctgcccttgcaaatgcta 87
           | || || |||||||||||||||||||
Sbjct: 482 cgctgacttctgcccttgcaaatgcta 508
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>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full
            insert sequence
          Length = 2549

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
            ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 1911 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 1967

                                       
Query: 61   ctctcacatctgcccttgcaaatgcta 87
            | || || |||||||||||||||||||
Sbjct: 1968 cgctgacttctgcccttgcaaatgcta 1994
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 75/87 (86%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                          
Query: 1      atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
              ||||||||||| ||||||| || |||||||||||  |||||||||   ||||||| ||||
Sbjct: 118519 atgatatgggaggcttcccagtacgagatgctggtttgtcacctg---ctccaattggaa 118463

                                         
Query: 61     ctctcacatctgcccttgcaaatgcta 87
              | || || |||||||||||||||||||
Sbjct: 118462 cgctgacttctgcccttgcaaatgcta 118436
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>gb|BT016789.1| Zea mays clone Contig622 mRNA sequence
          Length = 1208

 Score = 71.9 bits (36), Expect = 3e-10
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaa 60
           ||||||||||| ||||||||||| ||||||||| | | ||||| ||  ||| ||| || |
Sbjct: 547 atgatatgggaggcttccctgtgagagatgctgccttatcaccggccgctcaaattggga 606

                                      
Query: 61  ctctcacatctgcccttgcaaatgcta 87
           |||| || |||||||||||||||||||
Sbjct: 607 ctctgacttctgcccttgcaaatgcta 633
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>gb|AY103944.1| Zea mays PCO133356 mRNA sequence
          Length = 2499

 Score = 44.1 bits (22), Expect = 0.063
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                        
Query: 3    gatatgggaagcttccctgtgcgagatgctggcgtgtcacctgctcctccaatnggaact 62
            ||||||||  ||||||||||| | ||||||| | | || || ||| | | ||| || |||
Sbjct: 1832 gatatgggcggcttccctgtgagggatgctgccttatccccggctgcccaaattgggact 1891

                                     
Query: 63   ctcacatctgcccttgcaaatgcta 87
            || || |||||||||||||||||||
Sbjct: 1892 ctgacttctgcccttgcaaatgcta 1916
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>gb|AC109193.16| Mus musculus chromosome 5, clone RP24-352I22, complete sequence
          Length = 144094

 Score = 40.1 bits (20), Expect = 0.98
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    cacatctgcccttgcaaatg 84
             ||||||||||||||||||||
Sbjct: 31854 cacatctgcccttgcaaatg 31835
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>gb|BC070956.1| Rattus norvegicus cyclin-dependent kinase 4, mRNA (cDNA clone
           MGC:91543 IMAGE:7104124), complete cds
          Length = 1395

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 318 ctgctcctccattaggaactctcaca 293
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>gb|BC046336.1| Mus musculus cyclin-dependent kinase 4, mRNA (cDNA clone MGC:54677
           IMAGE:6312184), complete cds
          Length = 1365

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 306 ctgctcctccattaggaactctcaca 281
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>ref|NM_009870.2| Mus musculus cyclin-dependent kinase 4 (Cdk4), mRNA
          Length = 1448

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 294 ctgctcctccattaggaactctcaca 269
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>ref|XM_917659.2| PREDICTED: Mus musculus similar to Cell division protein kinase 4
           (Cyclin-dependent kinase 4) (PSK-J3) (CRK3) (LOC640611),
           mRNA
          Length = 1339

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 277 ctgctcctccattaggaactctcaca 252
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>gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, complete sequence
          Length = 235738

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    tcacatctgcccttgcaaa 82
             |||||||||||||||||||
Sbjct: 97371 tcacatctgcccttgcaaa 97353
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>gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, complete sequence
          Length = 238585

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 61     ctctcacatctgcccttgcaaat 83
              |||||||||||||||||| ||||
Sbjct: 206703 ctctcacatctgcccttggaaat 206681
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>gb|BC063158.1| Rattus norvegicus cyclin-dependent kinase 4, mRNA (cDNA clone
           IMAGE:6921199), partial cds
          Length = 1505

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 312 ctgctcctccattaggaactctcaca 287
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>gb|BC031599.1| Mus musculus mRNA similar to cyclin-dependent kinase 4 (cDNA clone
           IMAGE:3991748)
          Length = 2043

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 295 ctgctcctccattaggaactctcaca 270
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>emb|AL445623.2|HS315I14 Homo sapiens chromosome 9 BAC RP11-315I14, complete sequence
          Length = 198637

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    ctctcacatctgcccttgc 79
             |||||||||||||||||||
Sbjct: 26437 ctctcacatctgcccttgc 26455
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>gb|BC052694.1| Mus musculus cyclin-dependent kinase 4, mRNA (cDNA clone MGC:64635
           IMAGE:5714971), complete cds
          Length = 1366

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 301 ctgctcctccattaggaactctcaca 276
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>dbj|AK146107.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530030I07
           product:cyclin-dependent kinase 4, full insert sequence
          Length = 1309

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 273 ctgctcctccattaggaactctcaca 248
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>dbj|AK153465.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830164D15
           product:cyclin-dependent kinase 4, full insert sequence
          Length = 1344

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 306 ctgctcctccattaggaactctcaca 281
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>ref|NM_053593.2| Rattus norvegicus cyclin-dependent kinase 4 (Cdk4), mRNA
          Length = 1395

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 318 ctgctcctccattaggaactctcaca 293
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>dbj|AK003804.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110019B02
           product:cyclin-dependent kinase 4, full insert sequence
          Length = 1318

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 273 ctgctcctccattaggaactctcaca 248
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>dbj|AK019380.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3010015F03 product:cyclin-dependent
           kinase 4, full insert sequence
          Length = 1249

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 260 ctgctcctccattaggaactctcaca 235
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>dbj|AK012064.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610507G04
           product:cyclin-dependent kinase 4, full insert sequence
          Length = 1328

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 275 ctgctcctccattaggaactctcaca 250
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>dbj|AK011871.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610203O19
           product:cyclin-dependent kinase 4, full insert sequence
          Length = 1448

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 294 ctgctcctccattaggaactctcaca 269
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>dbj|AK078440.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720469L13 product:cyclin-dependent kinase 4, full
           insert sequence
          Length = 1306

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 260 ctgctcctccattaggaactctcaca 235
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>dbj|AK006918.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700068G16 product:cyclin-dependent
           kinase 4, full insert sequence
          Length = 885

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 273 ctgctcctccattaggaactctcaca 248
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>dbj|AK185090.1| Mus musculus cDNA, clone:Y0G0132J11, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000006911, based on BLAT search
          Length = 414

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 197 ctgctcctccattaggaactctcaca 172
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>gb|AF223390.1|AF223390 Mus musculus cyclin dependent kinase 4 (CDK4) gene, partial cds
          Length = 1100

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 814 ctgctcctccattaggaactctcaca 789
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>gb|AC154762.2| Mus musculus BAC clone RP24-418J10 from 16, complete sequence
          Length = 155379

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 61     ctctcacatctgcccttgcaaat 83
              |||||||||||||||||| ||||
Sbjct: 146760 ctctcacatctgcccttggaaat 146782
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>emb|CT573093.3| CH250-1K10, complete sequence
          Length = 185363

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    ctctcacatctgcccttgc 79
             |||||||||||||||||||
Sbjct: 45451 ctctcacatctgcccttgc 45433
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>gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, complete sequence
          Length = 173472

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 43    ctgctcctccaatnggaactctcaca 68
             ||||||||||| | ||||||||||||
Sbjct: 98494 ctgctcctccattaggaactctcaca 98519
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>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence
          Length = 159173

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 43    ctgctcctccaatnggaactctcaca 68
             ||||||||||| | ||||||||||||
Sbjct: 20628 ctgctcctccattaggaactctcaca 20653
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>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence
          Length = 180915

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    ctctcacatctgcccttgc 79
             |||||||||||||||||||
Sbjct: 16864 ctctcacatctgcccttgc 16846
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>gb|L11007.1|RATCDK4X Rattus norvegicus cyclin-dependent kinase 4 (cdk4) mRNA, complete
           cds
          Length = 1232

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 250 ctgctcctccattaggaactctcaca 225
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>gb|L01640.1|MUSG1CYC Mus musculus D-type G1 cyclin catalytic subunit (PSK-J3/CDK4) mRNA,
           complete cds
          Length = 912

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 43  ctgctcctccaatnggaactctcaca 68
           ||||||||||| | ||||||||||||
Sbjct: 133 ctgctcctccattaggaactctcaca 108


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 640,914
Number of Sequences: 3902068
Number of extensions: 640914
Number of successful extensions: 48382
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48306
Number of HSP's gapped (non-prelim): 68
length of query: 90
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 69
effective length of database: 17,151,101,840
effective search space: 1183426026960
effective search space used: 1183426026960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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