Clone Name	baal2n22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome...	410	e-111
2	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	410	e-111
3	gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str...	410	e-111
4	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	410	e-111
5	dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clon...	410	e-111
6	gb|AY109543.1| Zea mays CL854_1 mRNA sequence	276	7e-71
7	ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative...	240	4e-60
8	gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti...	240	4e-60
9	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
10	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	240	4e-60
11	gb|BT014572.1| Lycopersicon esculentum clone 134027R, mRNA sequence	64	5e-07
12	emb|BX831005.1|CNS0A0O3 Arabidopsis thaliana Full-length cDNA Co...	64	5e-07
13	ref|NM_203174.1| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL...	56	1e-04
14	ref|NM_124189.3| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL...	56	1e-04
15	gb|BT025326.1| Arabidopsis thaliana At5g48150 mRNA, complete cds	56	1e-04
16	emb|BX831686.1|CNS0A10E Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
17	gb|AF153443.1|AF153443 Arabidopsis thaliana phytochrome A signal...	56	1e-04
18	dbj|AK117483.1| Arabidopsis thaliana At5g48150 mRNA for putative...	56	1e-04
19	dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	56	1e-04
20	ref|NM_126521.2| Arabidopsis thaliana SCL21 (SCARECROW-LIKE 21);...	52	0.002
21	emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4,...	52	0.002
22	gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genom...	52	0.002
23	gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map...	52	0.002
24	dbj|AK221099.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
25	emb|BX818810.1|CNS0A9T0 Arabidopsis thaliana Full-length cDNA Co...	52	0.002
26	gb|AF210732.1|AF210732 Arabidopsis thaliana scarecrow-like 21 (S...	52	0.002
27	emb|AJ538575.1|NTA538575 Nicotiana tabacum cDNA-AFLP-fragment BC...	52	0.002
28	dbj|AK175990.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
29	dbj|AK175210.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
30	dbj|AK058352.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.007
31	emb|BX821639.1|CNS0A92G Arabidopsis thaliana Full-length cDNA Co...	48	0.028
32	ref|XM_478905.1| Oryza sativa (japonica cultivar-group), mRNA	46	0.11
33	ref|XM_506430.1| PREDICTED Oryza sativa (japonica cultivar-group...	46	0.11
34	dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
35	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.11
36	gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-respons...	46	0.11
37	emb|AJ538615.1|NTA538615 Nicotiana tabacum cDNA-AFLP-fragment BC...	46	0.11
38	dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D...	46	0.11
39	dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
40	dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
41	dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
42	emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section...	42	1.8
43	gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete se...	40	6.9
44	gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (...	40	6.9
45	gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, comp...	40	6.9
46	gb|AY727731.1| Anopheles funestus isolate 442 NADH dehydrogenase...	40	6.9
47	gb|AY727676.1| Anopheles funestus isolate 220 NADH dehydrogenase...	40	6.9
48	gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, co...	40	6.9
49	gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds	40	6.9
50	gb|AY062209.1| Oryza sativa chitin-inducible gibberellin-respons...	40	6.9
51	dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic D...	40	6.9
52	dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.9
53	dbj|AK069266.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.9
54	emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in...	40	6.9
55	emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chr...	40	6.9
56	gb|DQ102955.1| Anopheles funestus KE52 from Kenya NADH dehydroge...	40	6.9
57	gb|DQ102952.1| Anopheles funestus KE31 from Kenya NADH dehydroge...	40	6.9

---

>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNOa0279P04, complete sequence
          Length = 32479

 Score =  410 bits (207), Expect = e-111
 Identities = 384/443 (86%)
 Strand = Plus / Plus

                                                                         
Query: 68    gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
             ||||||||||| || |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 16859 gagctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttac 16918

                                                                         
Query: 128   atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
             |||||||||||||| || || || |||||||||||||| ||||||||| |||||||||| 
Sbjct: 16919 atgtctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatc 16978

                                                                         
Query: 188   gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
             || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 16979 gacttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaagg 17038

                                                                         
Query: 248   gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
              || | ||||||||||| || || ||||||||||||||||| ||  |||| ||  |||||
Sbjct: 17039 cctgggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcc 17098

                                                                         
Query: 308   cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
             ||||||||||||||||||||||| || ||  |||||| ||| ||||||||||||||| ||
Sbjct: 17099 cgaggtggtggactggatatagtcggacggcggttattcaatattgcccagtcatgtggt 17158

                                                                         
Query: 368   ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
             |||||||||||||||||||||||    |||||||||||||||||||  ||||||||||| 
Sbjct: 17159 ctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgcttgaacatctt 17218

                                                                         
Query: 428   gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
             |||||||||   || |||| ||||| ||| || ||||| || ||||||||||| ||||||
Sbjct: 17219 gatataagatctggggaggttattgttgttaattttgcctaccagctgcatcacactcct 17278

                                    
Query: 488   gatgagagtgtctgcatagaaaa 510
             |||||||||||  ||||||||||
Sbjct: 17279 gatgagagtgtgggcatagaaaa 17301



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 11    actggacatgcgttgtataaatctctgaagtgtaaggaacct 52
             ||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 16808 actgggcatgccttatataaatccctgaagtgtaaagaacct 16849

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  410 bits (207), Expect = e-111
 Identities = 384/443 (86%)
 Strand = Plus / Plus

                                                                           
Query: 68      gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
               ||||||||||| || |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 4833223 gagctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttac 4833282

                                                                           
Query: 128     atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
               |||||||||||||| || || || |||||||||||||| ||||||||| |||||||||| 
Sbjct: 4833283 atgtctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatc 4833342

                                                                           
Query: 188     gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
               || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 4833343 gacttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaagg 4833402

                                                                           
Query: 248     gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
                || | ||||||||||| || || ||||||||||||||||| ||  |||| ||  |||||
Sbjct: 4833403 cctgggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcc 4833462

                                                                           
Query: 308     cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
               ||||||||||||||||||||||| || ||  |||||| ||| ||||||||||||||| ||
Sbjct: 4833463 cgaggtggtggactggatatagtcggacggcggttattcaatattgcccagtcatgtggt 4833522

                                                                           
Query: 368     ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
               |||||||||||||||||||||||    |||||||||||||||||||  ||||||||||| 
Sbjct: 4833523 ctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgcttgaacatctt 4833582

                                                                           
Query: 428     gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
               |||||||||   || |||| ||||| ||| || ||||| || ||||||||||| ||||||
Sbjct: 4833583 gatataagatctggggaggttattgttgttaattttgcctaccagctgcatcacactcct 4833642

                                      
Query: 488     gatgagagtgtctgcatagaaaa 510
               |||||||||||  ||||||||||
Sbjct: 4833643 gatgagagtgtgggcatagaaaa 4833665



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                         
Query: 11      actggacatgcgttgtataaatctctgaagtgtaaggaacct 52
               ||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 4833172 actgggcatgccttatataaatccctgaagtgtaaagaacct 4833213

---

>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score =  410 bits (207), Expect = e-111
 Identities = 384/443 (86%)
 Strand = Plus / Minus

                                                                        
Query: 68   gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
            ||||||||||| || |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 2232 gagctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttac 2173

                                                                        
Query: 128  atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
            |||||||||||||| || || || |||||||||||||| ||||||||| |||||||||| 
Sbjct: 2172 atgtctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatc 2113

                                                                        
Query: 188  gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
            || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 2112 gacttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaagg 2053

                                                                        
Query: 248  gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
             || | ||||||||||| || || ||||||||||||||||| ||  |||| ||  |||||
Sbjct: 2052 cctgggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcc 1993

                                                                        
Query: 308  cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
            ||||||||||||||||||||||| || ||  |||||| ||| ||||||||||||||| ||
Sbjct: 1992 cgaggtggtggactggatatagtcggacggcggttattcaatattgcccagtcatgtggt 1933

                                                                        
Query: 368  ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
            |||||||||||||||||||||||    |||||||||||||||||||  ||||||||||| 
Sbjct: 1932 ctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgcttgaacatctt 1873

                                                                        
Query: 428  gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
            |||||||||   || |||| ||||| ||| || ||||| || ||||||||||| ||||||
Sbjct: 1872 gatataagatctggggaggttattgttgttaattttgcctaccagctgcatcacactcct 1813

                                   
Query: 488  gatgagagtgtctgcatagaaaa 510
            |||||||||||  ||||||||||
Sbjct: 1812 gatgagagtgtgggcatagaaaa 1790



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 11   actggacatgcgttgtataaatctctgaagtgtaaggaacct 52
            ||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 2283 actgggcatgccttatataaatccctgaagtgtaaagaacct 2242

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  410 bits (207), Expect = e-111
 Identities = 384/443 (86%)
 Strand = Plus / Plus

                                                                           
Query: 68      gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
               ||||||||||| || |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 4833338 gagctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttac 4833397

                                                                           
Query: 128     atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
               |||||||||||||| || || || |||||||||||||| ||||||||| |||||||||| 
Sbjct: 4833398 atgtctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatc 4833457

                                                                           
Query: 188     gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
               || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 4833458 gacttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaagg 4833517

                                                                           
Query: 248     gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
                || | ||||||||||| || || ||||||||||||||||| ||  |||| ||  |||||
Sbjct: 4833518 cctgggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcc 4833577

                                                                           
Query: 308     cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
               ||||||||||||||||||||||| || ||  |||||| ||| ||||||||||||||| ||
Sbjct: 4833578 cgaggtggtggactggatatagtcggacggcggttattcaatattgcccagtcatgtggt 4833637

                                                                           
Query: 368     ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
               |||||||||||||||||||||||    |||||||||||||||||||  ||||||||||| 
Sbjct: 4833638 ctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgcttgaacatctt 4833697

                                                                           
Query: 428     gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
               |||||||||   || |||| ||||| ||| || ||||| || ||||||||||| ||||||
Sbjct: 4833698 gatataagatctggggaggttattgttgttaattttgcctaccagctgcatcacactcct 4833757

                                      
Query: 488     gatgagagtgtctgcatagaaaa 510
               |||||||||||  ||||||||||
Sbjct: 4833758 gatgagagtgtgggcatagaaaa 4833780



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                         
Query: 11      actggacatgcgttgtataaatctctgaagtgtaaggaacct 52
               ||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 4833287 actgggcatgccttatataaatccctgaagtgtaaagaacct 4833328

---

>dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E22, full
            insert sequence
          Length = 2582

 Score =  410 bits (207), Expect = e-111
 Identities = 384/443 (86%)
 Strand = Plus / Plus

                                                                        
Query: 68   gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
            ||||||||||| || |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 1196 gagctcatgtcttatatgcatctcctctatgagatatgcccgtttttcaagtttggttac 1255

                                                                        
Query: 128  atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
            |||||||||||||| || || || |||||||||||||| ||||||||| |||||||||| 
Sbjct: 1256 atgtctgccaatggagcaattgcagaggctgttaagggcgagaactttgttcacatcatc 1315

                                                                        
Query: 188  gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
            || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 1316 gacttccaaattgctcaaggtagccagtgggcaactatgatacaggcccttgctgcaagg 1375

                                                                        
Query: 248  gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
             || | ||||||||||| || || ||||||||||||||||| ||  |||| ||  |||||
Sbjct: 1376 cctgggggaccaccatacctgaggattactggtatagatgactcgaattctgcccatgcc 1435

                                                                        
Query: 308  cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
            ||||||||||||||||||||||| || ||  |||||| ||| ||||||||||||||| ||
Sbjct: 1436 cgaggtggtggactggatatagtcggacggcggttattcaatattgcccagtcatgtggt 1495

                                                                        
Query: 368  ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
            |||||||||||||||||||||||    |||||||||||||||||||  ||||||||||| 
Sbjct: 1496 ctgccctttgagttcaatgctgtcccagcagctagtcatgaggttatgcttgaacatctt 1555

                                                                        
Query: 428  gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
            |||||||||   || |||| ||||| ||| || ||||| || ||||||||||| ||||||
Sbjct: 1556 gatataagatctggggaggttattgttgttaattttgcctaccagctgcatcacactcct 1615

                                   
Query: 488  gatgagagtgtctgcatagaaaa 510
            |||||||||||  ||||||||||
Sbjct: 1616 gatgagagtgtgggcatagaaaa 1638



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 11   actggacatgcgttgtataaatctctgaagtgtaaggaacct 52
            ||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 1145 actgggcatgccttatataaatccctgaagtgtaaagaacct 1186

---

>gb|AY109543.1| Zea mays CL854_1 mRNA sequence
          Length = 2341

 Score =  276 bits (139), Expect = 7e-71
 Identities = 410/502 (81%)
 Strand = Plus / Plus

                                                                        
Query: 11   actggacatgcgttgtataaatctctgaagtgtaaggaacctcaacctacaaattcagag 70
            ||||||||||| |||||||||||||||||||| || || |||    |||| | ||| |||
Sbjct: 995  actggacatgccttgtataaatctctgaagtgcaaagagcctgtggctacgagttctgag 1054

                                                                        
Query: 71   ctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttacatg 130
            ||| ||||||| ||||||||||| ||||| ||||||||||||||||| || |||||||||
Sbjct: 1055 ctcttgtcctatatgcatcttctttatgagatctgtccattcttcaagttcggttacatg 1114

                                                                        
Query: 131  tctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcattgat 190
            |||||||||||| | ||||| || || |||||     |  || ||||||||||||| |||
Sbjct: 1115 tctgccaatggtcccatagctgaagcggttaannnnnaagacattattcacatcatcgat 1174

                                                                        
Query: 191  ttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagggct 250
            || ||||| ||||| || || |||||| | ||||||||||||||||||||| | ||| ||
Sbjct: 1175 tttcaaatcgctcagggtagtcagtggatgactatgatacaggcccttgcttcaaggcct 1234

                                                                        
Query: 251  agcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcccga 310
             |  | | |||||| ||||| || ||||| |||||||| ||  |||| ||| ||||||||
Sbjct: 1235 gggaggcgaccatacctaaggatcactggcatagatgactcgaattctgctcatgcccga 1294

                                                                        
Query: 311  ggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgtctg 370
            ||||||||||||||||| ||||| |  |||||   ||  || |||||||||||| |||||
Sbjct: 1295 ggtggtggactggatatggttggacagaggttgcacagaatggcccagtcatgtggtctg 1354

                                                                        
Query: 371  ccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctcgat 430
            ||||| ||||||||||||||    ||||||||||||||||||    ||||| ||||   |
Sbjct: 1355 cccttcgagttcaatgctgtgccagcagctagtcatgaggttgtgtttgaagatctttgt 1414

                                                                        
Query: 431  ataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcctgat 490
             |||||   || ||||| || | |||||| ||||| ||||||||||||||||||||||||
Sbjct: 1415 ctaagatctggggaggccatcgttgtcaattttgcttatcagctgcatcatactcctgat 1474

                                  
Query: 491  gagagtgtctgcatagaaaacc 512
            ||||| ||  ||||||||||||
Sbjct: 1475 gagagcgtgggcatagaaaacc 1496

---

>ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative SCARECROW gene
            regulator-like (OJ1003C07.9), mRNA
          Length = 1575

 Score =  240 bits (121), Expect = 4e-60
 Identities = 364/445 (81%)
 Strand = Plus / Plus

                                                                        
Query: 68   gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
            ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 676  gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 735

                                                                        
Query: 128  atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
            ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 736  atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 795

                                                                        
Query: 188  gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
            || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 796  gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 855

                                                                        
Query: 248  gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
             || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 856  cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 915

                                                                        
Query: 308  cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
             |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 916  agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 975

                                                                        
Query: 368  ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
            |||||||||||||||||||||||    || ||||| |||||||||   ||||| ||||| 
Sbjct: 976  ctgccctttgagttcaatgctgttccagctgctagccatgaggtttatcttgagcatctt 1035

                                                                        
Query: 428  gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
            |||||||||   || || | ||||| ||| || ||||| |||||||||||||| ||||| 
Sbjct: 1036 gatataagagttggtgaagttattgttgtgaattttgcctatcagctgcatcacactcca 1095

                                     
Query: 488  gatgagagtgtctgcatagaaaacc 512
            ||||| |||||  ||| ||||||||
Sbjct: 1096 gatgaaagtgtaagcacagaaaacc 1120

---

>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score =  240 bits (121), Expect = 4e-60
 Identities = 364/445 (81%)
 Strand = Plus / Plus

                                                                         
Query: 68    gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
             ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 68093 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 68152

                                                                         
Query: 128   atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
             ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 68153 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 68212

                                                                         
Query: 188   gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
             || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 68213 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 68272

                                                                         
Query: 248   gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
              || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 68273 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 68332

                                                                         
Query: 308   cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
              |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 68333 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 68392

                                                                         
Query: 368   ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
             |||||||||||||||||||||||    || ||||| |||||||||   ||||| ||||| 
Sbjct: 68393 ctgccctttgagttcaatgctgttccagctgctagccatgaggtttatcttgagcatctt 68452

                                                                         
Query: 428   gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
             |||||||||   || || | ||||| ||| || ||||| |||||||||||||| ||||| 
Sbjct: 68453 gatataagagttggtgaagttattgttgtgaattttgcctatcagctgcatcacactcca 68512

                                      
Query: 488   gatgagagtgtctgcatagaaaacc 512
             ||||| |||||  ||| ||||||||
Sbjct: 68513 gatgaaagtgtaagcacagaaaacc 68537

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  240 bits (121), Expect = 4e-60
 Identities = 364/445 (81%)
 Strand = Plus / Minus

                                                                            
Query: 68       gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
                ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 11090964 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 11090905

                                                                            
Query: 128      atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
                ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 11090904 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 11090845

                                                                            
Query: 188      gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
                || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 11090844 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 11090785

                                                                            
Query: 248      gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
                 || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 11090784 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 11090725

                                                                            
Query: 308      cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
                 |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 11090724 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 11090665

                                                                            
Query: 368      ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
                |||||||||||||||||||||||    || ||||| |||||||||   ||||| ||||| 
Sbjct: 11090664 ctgccctttgagttcaatgctgttccagctgctagccatgaggtttatcttgagcatctt 11090605

                                                                            
Query: 428      gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
                |||||||||   || || | ||||| ||| || ||||| |||||||||||||| ||||| 
Sbjct: 11090604 gatataagagttggtgaagttattgttgtgaattttgcctatcagctgcatcacactcca 11090545

                                         
Query: 488      gatgagagtgtctgcatagaaaacc 512
                ||||| |||||  ||| ||||||||
Sbjct: 11090544 gatgaaagtgtaagcacagaaaacc 11090520

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  240 bits (121), Expect = 4e-60
 Identities = 364/445 (81%)
 Strand = Plus / Minus

                                                                            
Query: 68       gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 127
                ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 11097404 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 11097345

                                                                            
Query: 128      atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 187
                ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 11097344 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 11097285

                                                                            
Query: 188      gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 247
                || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 11097284 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 11097225

                                                                            
Query: 248      gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 307
                 || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 11097224 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 11097165

                                                                            
Query: 308      cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 367
                 |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 11097164 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 11097105

                                                                            
Query: 368      ctgccctttgagttcaatgctgtaaatgcagctagtcatgaggttacacttgaacatctc 427
                |||||||||||||||||||||||    || ||||| |||||||||   ||||| ||||| 
Sbjct: 11097104 ctgccctttgagttcaatgctgttccagctgctagccatgaggtttatcttgagcatctt 11097045

                                                                            
Query: 428      gatataagaaagggagaggctattgctgtcaactttgcatatcagctgcatcatactcct 487
                |||||||||   || || | ||||| ||| || ||||| |||||||||||||| ||||| 
Sbjct: 11097044 gatataagagttggtgaagttattgttgtgaattttgcctatcagctgcatcacactcca 11096985

                                         
Query: 488      gatgagagtgtctgcatagaaaacc 512
                ||||| |||||  ||| ||||||||
Sbjct: 11096984 gatgaaagtgtaagcacagaaaacc 11096960

---

>gb|BT014572.1| Lycopersicon esculentum clone 134027R, mRNA sequence
          Length = 2086

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 185  attgatttccaaattgctcaagggagccagtgggtaactatgat 228
            |||||||| ||||||||||||||||||||||||||  |||||||
Sbjct: 1143 attgattttcaaattgctcaagggagccagtgggtgcctatgat 1186



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 112  cttcaaatttggttacatgtctgccaatggtgc 144
            |||||||||||| |||||||| || ||||||||
Sbjct: 1070 cttcaaatttggatacatgtcagctaatggtgc 1102

---

>emb|BX831005.1|CNS0A0O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS48ZD10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1693

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 113/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| ||||||||| | |||
Sbjct: 727 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcttcaaat 786

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  ||||||    ||||||| |||||||||||||| 
Sbjct: 787 ggtgctattgctgaggcaatgaaggaagagaacagagttcacattattgatttccaaatc 846

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 847 ggtcaagggagtcaatgggt 866

---

>ref|NM_203174.1| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1);
           transcription factor AT5G48150 (PAT1) transcript variant
           AT5G48150.2 mRNA, complete cds
          Length = 1927

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 802 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 861

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 862 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 921

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 922 ggtcaagggagtcaatgggt 941

---

>ref|NM_124189.3| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1);
           transcription factor AT5G48150 (PAT1) transcript variant
           AT5G48150.1 mRNA, complete cds
          Length = 1852

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 727 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 786

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 787 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 846

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 847 ggtcaagggagtcaatgggt 866

---

>gb|BT025326.1| Arabidopsis thaliana At5g48150 mRNA, complete cds
          Length = 1473

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 586 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 645

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 646 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 705

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 706 ggtcaagggagtcaatgggt 725

---

>emb|BX831686.1|CNS0A10E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1756

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 802 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 861

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 862 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 921

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 922 ggtcaagggagtcaatgggt 941

---

>gb|AF153443.1|AF153443 Arabidopsis thaliana phytochrome A signal transduction 1 protein
           (PAT1) mRNA, complete cds
          Length = 1793

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 715 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 774

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 775 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 834

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 835 ggtcaagggagtcaatgggt 854

---

>dbj|AK117483.1| Arabidopsis thaliana At5g48150 mRNA for putative SCARECROW gene
           regulator, complete cds, clone: RAFL17-10-L05
          Length = 1461

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 446 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 505

                                                                       
Query: 140 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 506 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 565

                               
Query: 200 gctcaagggagccagtgggt 219
           | ||||||||| || |||||
Sbjct: 566 ggtcaagggagtcaatgggt 585

---

>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
          Length = 59372

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                         
Query: 80    tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 139
             ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 15083 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 15024

                                                                         
Query: 140   ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 199
             |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 15023 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 14964

                                 
Query: 200   gctcaagggagccagtgggt 219
             | ||||||||| || |||||
Sbjct: 14963 ggtcaagggagtcaatgggt 14944

---

>ref|NM_126521.2| Arabidopsis thaliana SCL21 (SCARECROW-LIKE 21); transcription
           factor AT2G04890 (SCL21) mRNA, complete cds
          Length = 2220

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 656 attcacattattgacttccaaattggacaagggagccagtgg 697

---

>emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4, COMPLETE SEQUENCE
          Length = 108871

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 112   cttcaaatttggttacatgtctgccaatgg 141
             |||||||||||||||||||||||| |||||
Sbjct: 75001 cttcaaatttggttacatgtctgcaaatgg 74972



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 188   gatttccaaattgctcaagggagcca 213
             |||||||||||||||||||| |||||
Sbjct: 74925 gatttccaaattgctcaaggaagcca 74900

---

>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence,
            complete sequence
          Length = 103889

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 176  attcacatcattgatttccaaattgctcaagggagccagtgg 217
            |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 2914 attcacattattgacttccaaattggacaagggagccagtgg 2873

---

>gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map RNS1, complete
            sequence
          Length = 116217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 176  attcacatcattgatttccaaattgctcaagggagccagtgg 217
            |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 7874 attcacattattgacttccaaattggacaagggagccagtgg 7915

---

>dbj|AK221099.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL22-85-M15
          Length = 1526

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>emb|BX818810.1|CNS0A9T0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB15ZE12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1588

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 637 attcacattattgacttccaaattggacaagggagccagtgg 678

---

>gb|AF210732.1|AF210732 Arabidopsis thaliana scarecrow-like 21 (SCL21) mRNA, complete cds
          Length = 1634

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 656 attcacattattgacttccaaattggacaagggagccagtgg 697

---

>emb|AJ538575.1|NTA538575 Nicotiana tabacum cDNA-AFLP-fragment BC3-M24-001
          Length = 445

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 176 attcacatcattgatttccaaattgctcaaggga 209
           ||||||||||| |||||||||||||| |||||||
Sbjct: 176 attcacatcatagatttccaaattgcgcaaggga 209



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 119 tttggttacatgtctgccaatggtgctatagc 150
           |||||||||||| |||| |||||||| |||||
Sbjct: 119 tttggttacatggctgcaaatggtgcaatagc 150

---

>dbj|AK175990.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL22-68-E12
          Length = 1526

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>dbj|AK175210.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL21-63-H23
          Length = 1617

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 176 attcacatcattgatttccaaattgctcaagggagccagtgg 217
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>dbj|AK058352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E08, full
           insert sequence
          Length = 1336

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 448 tattgctgtcaactttgcatatcagctgcatcatactcctgatgagagtgtctgcataga 507
           ||||| ||| || ||||| |||||||||||||| ||||| ||||| |||||  ||| |||
Sbjct: 369 tattgttgtgaattttgcctatcagctgcatcacactccagatgaaagtgtaagcacaga 428

                
Query: 508 aaacc 512
           |||||
Sbjct: 429 aaacc 433

---

>emb|BX821639.1|CNS0A92G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL5ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1497

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 176 attcacatcattgatttccaaattgctcaagggagccagt 215
           |||||||| ||||| ||||||||||  |||||||||||||
Sbjct: 606 attcacattattgacttccaaattggacaagggagccagt 645

---

>ref|XM_478905.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2224

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 163  ggg 165
            |||
Sbjct: 1142 ggg 1144

---

>ref|XM_506430.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1127_E01.113 mRNA
          Length = 2234

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 163  ggg 165
            |||
Sbjct: 1142 ggg 1144

---

>dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C06, full
           insert sequence
          Length = 1343

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 103 ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
           |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 168 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 227

              
Query: 163 ggg 165
           |||
Sbjct: 228 ggg 230

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 103      ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
                |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 23599317 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 23599376

                   
Query: 163      ggg 165
                |||
Sbjct: 23599377 ggg 23599379



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 166      tgagaactttattcacatcattgatttccaaattgctcaaggga 209
                |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 21564998 tgagaacaatatccacataattgattttcagattgctcaaggga 21565041

---

>gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-responsive protein (GIGR2)
            mRNA, complete cds
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1071 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1130

               
Query: 163  ggg 165
            |||
Sbjct: 1131 ggg 1133

---

>emb|AJ538615.1|NTA538615 Nicotiana tabacum cDNA-AFLP-fragment BC3-M42-008
          Length = 341

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 116 aaatttggttacatgtctgccaatggtgctatagc 150
           ||||||||||||||| |||| |||||||| |||||
Sbjct: 135 aaatttggttacatggctgcaaatggtgcaatagc 169

---

>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1127_E01
          Length = 123787

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 103   ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
             |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 51758 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 51817

                
Query: 163   ggg 165
             |||
Sbjct: 51818 ggg 51820

---

>dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B20, full
            insert sequence
          Length = 2272

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1130 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1189

               
Query: 163  ggg 165
            |||
Sbjct: 1190 ggg 1192

---

>dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M01, full
            insert sequence
          Length = 2224

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 163  ggg 165
            |||
Sbjct: 1142 ggg 1144

---

>dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I02, full
            insert sequence
          Length = 2234

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 103  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 162
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 163  ggg 165
            |||
Sbjct: 1142 ggg 1144

---

>emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section 9 of 21): from 1602883 to
             1807145
          Length = 204263

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   atcattgatttccaaattgctcaag 206
             ||||||||||| |||||||||||||
Sbjct: 70890 atcattgattttcaaattgctcaag 70914

---

>gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete sequence
          Length = 89055

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 176  attcacatcattgatttccaaattgctcaagg 207
            |||||||| ||||| ||||||||||| |||||
Sbjct: 8951 attcacataattgacttccaaattgcacaagg 8982

---

>gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (kn1) gene, complete
            cds
          Length = 22402

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  gtccattcttcaaatttggt 124
            ||||||||||||||||||||
Sbjct: 7836 gtccattcttcaaatttggt 7817

---

>gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, complete sequence
          Length = 193599

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 456    tcaactttgcatatcagctgcatc 479
              ||||||||||| ||||||||||||
Sbjct: 185408 tcaactttgcaaatcagctgcatc 185385

---

>gb|AY727731.1| Anopheles funestus isolate 442 NADH dehydrogenase subunit 5 (ND5)
           gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gtccattcttcaaatttggttaca 128
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|AY727676.1| Anopheles funestus isolate 220 NADH dehydrogenase subunit 5 (ND5)
           gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gtccattcttcaaatttggttaca 128
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, complete sequence
          Length = 187559

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 456    tcaactttgcatatcagctgcatc 479
              ||||||||||| ||||||||||||
Sbjct: 168592 tcaactttgcaaatcagctgcatc 168615

---

>gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds
          Length = 9369

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  gtccattcttcaaatttggt 124
            ||||||||||||||||||||
Sbjct: 5253 gtccattcttcaaatttggt 5234

---

>gb|AY062209.1| Oryza sativa chitin-inducible gibberellin-responsive protein (CIGR1)
            mRNA, complete cds
          Length = 2104

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 166  tgagaactttattcacatcattgatttccaaattgctcaaggga 209
            |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 1051 tgagaacaatatccacataattgattttcagattgctcaaggga 1094

---

>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0006G05
          Length = 56865

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 166   tgagaactttattcacatcattgatttccaaattgctcaaggga 209
             |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 11372 tgagaacaatatccacataattgattttcagattgctcaaggga 11415

---

>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1582_D10
          Length = 103475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 166    tgagaactttattcacatcattgatttccaaattgctcaaggga 209
              |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 102782 tgagaacaatatccacataattgattttcagattgctcaaggga 102825

---

>dbj|AK069266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012G08, full
            insert sequence
          Length = 2162

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 166  tgagaactttattcacatcattgatttccaaattgctcaaggga 209
            |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 1061 tgagaacaatatccacataattgattttcagattgctcaaggga 1104

---

>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19,
             complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   gagttcaatgctgtaaatgc 396
             ||||||||||||||||||||
Sbjct: 45254 gagttcaatgctgtaaatgc 45273

---

>emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chromosome 4, complete
              sequence
          Length = 157996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ttctctatgatatctgtcca 109
              ||||||||||||||||||||
Sbjct: 135771 ttctctatgatatctgtcca 135752

---

>gb|DQ102955.1| Anopheles funestus KE52 from Kenya NADH dehydrogenase subunit 5
           (ND5) gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gtccattcttcaaatttggttaca 128
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|DQ102952.1| Anopheles funestus KE31 from Kenya NADH dehydrogenase subunit 5
           (ND5) gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gtccattcttcaaatttggttaca 128
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,146,652
Number of Sequences: 3902068
Number of extensions: 4146652
Number of successful extensions: 73241
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73007
Number of HSP's gapped (non-prelim): 218
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---