ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 543 e-151
2ref|XM_470005.1| Oryza sativa (japonica cultivar-group), mRNA 535 e-149
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 325 8e-86
4gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 325 8e-86
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
6gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
9emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Co... 117 4e-23
10ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein bind... 109 9e-21
11gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds 109 9e-21
12gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex p... 109 9e-21
13gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC... 96 1e-16
14dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone... 86 1e-13
15ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus simila... 70 8e-09
16gb|AY393846.1| Gallus gallus chaperonin subunit 8 theta mRNA, co... 56 1e-04
17ref|NM_001004389.1| Gallus gallus chaperonin containing TCP1, su... 56 1e-04
18gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
19ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hyp... 46 0.11
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
21emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 46 0.11
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.7
23ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / pro... 40 6.8
24ref|XM_525933.1| PREDICTED: Pan troglodytes similar to Polyadeny... 40 6.8
25gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, c... 40 6.8
26gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome... 40 6.8
27gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, co... 40 6.8
28gb|BC033032.1| Homo sapiens cDNA clone IMAGE:5268495 40 6.8
29gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete... 40 6.8
30gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 40 6.8
31gb|BC068242.1| Homo sapiens poly(A) binding protein, cytoplasmic... 40 6.8
32gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe... 40 6.8
33emb|X74334.1|AEFHPG A.eutrophus fhp gene for flavohemoprotein 40 6.8
34ref|NM_058568.2| Caenorhabditis elegans Y39G10AR.17 (Y39G10AR.17... 40 6.8
35ref|NG_001267.1| Homo sapiens poly(A) binding protein, cytoplasm... 40 6.8
36tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, compl... 40 6.8
37gb|AF132027.1|AF132027 Homo sapiens poly(A)-binding protein-rela... 40 6.8
38emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Co... 40 6.8
39dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 6.8
40gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, comple... 40 6.8
41gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-201... 40 6.8
42gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete ... 40 6.8
43dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.8
44dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide... 40 6.8
45dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, comp... 40 6.8
46gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermos... 40 6.8
47gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homo... 40 6.8
48emb|BX908390.7| Zebrafish DNA sequence from clone CH211-113C15 i... 40 6.8
49emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in... 40 6.8
50gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds 40 6.8
51gb|U60801.1|HSU60801 Human poly(A)-binding protein (PABP) proces... 40 6.8
52dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock prot... 40 6.8
53emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.8
54gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, comple... 40 6.8
55dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit... 40 6.8
56dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit... 40 6.8 
>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full
           insert sequence
          Length = 2070

 Score =  543 bits (274), Expect = e-151
 Identities = 433/486 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggcacaagcatctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgc 64
           ||||||||||| ||||| |||||||| ||||||||||| |||||||||| |||| |||||
Sbjct: 157 gggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgc 216

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 217 gagctctccgccatcacccgcacctccctcggccccaacggaatgaataagatggtcatt 276

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           || ||||| |||||||||||| ||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 277 aaccatctcgacaagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgag 336

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
           ||||||||||||||||||||| ||||||| || |||| ||| || || |||||||| |||
Sbjct: 337 gtccagcaccctgctgctaagatcctggtactagctggcagggctcagcaggaggaaatc 396

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||
Sbjct: 397 ggtgatggagctaacctcaccatatcttttgctggtgaactgcttgagaaggccgaggag 456

                                                                       
Query: 305 ctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaaggccattaat 364
           || |||||||||||  ||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 457 cttatcaggatggggttgcatccaagtgagatcatcattggctacaccaaggccattaat 516

                                                                       
Query: 365 aagacgcttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaagg 424
           |||||  ||||||| ||||| ||||| || |||||||| || ||||| |||||||| |||
Sbjct: 517 aagactgttgagatcttggaagatcttgtggagaaaggttcagaaaacatggatgtgagg 576

                                                                       
Query: 425 aacacggaggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccag 484
           |||| |||||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||
Sbjct: 577 aacaaggaggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcag 636

                 
Query: 485 gaggat 490
           ||||||
Sbjct: 637 gaggat 642
to top
>ref|XM_470005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2070

 Score =  535 bits (270), Expect = e-149
 Identities = 432/486 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggcacaagcatctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgc 64
           ||||||||||| ||||| |||||||| ||||||||||| |||||||||| |||| |||||
Sbjct: 157 gggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgc 216

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 217 gagctctccgccatcacccgcacctccctcggccccaacggaatgaataagatggtcatt 276

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           || ||||| |||||||||||| ||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 277 aaccatctcgacaagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgag 336

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
           ||||||||||||||||||||| ||||||| || |||| ||| || || |||||||| |||
Sbjct: 337 gtccagcaccctgctgctaagatcctggtactagctggcagggctcagcaggaggaaatc 396

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||
Sbjct: 397 ggtgatggagctaacctcaccatatcttttgctggtgaactgcttgagaaggccgaggag 456

                                                                       
Query: 305 ctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaaggccattaat 364
           || |||||||||||  ||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 457 cttatcaggatggggttgcatccaagtgagatcatcattggctacaccaaggccattaat 516

                                                                       
Query: 365 aagacgcttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaagg 424
           |||||  ||||||| ||||| ||||| || |||||||| || || || |||||||| |||
Sbjct: 517 aagactgttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgagg 576

                                                                       
Query: 425 aacacggaggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccag 484
           |||| |||||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||
Sbjct: 577 aacaaggaggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcag 636

                 
Query: 485 gaggat 490
           ||||||
Sbjct: 637 gaggat 642
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  325 bits (164), Expect = 8e-86
 Identities = 239/264 (90%)
 Strand = Plus / Plus

                                                                            
Query: 104      ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 163
                ||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 33289650 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33289709

                                                                            
Query: 164      acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 223
                ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 33289710 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33289769

                                                                            
Query: 224      agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 283
                || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 33289770 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33289829

                                                                            
Query: 284      ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 343
                ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 33289830 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33289889

                                        
Query: 344      gggtataccaaggccattaataag 367
                || || ||||||||||||||||||
Sbjct: 33289890 ggctacaccaaggccattaataag 33289913



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                            
Query: 5        gggcacaagcatctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgc 64
                ||||||||||| ||||| |||||||| ||||||||||| |||||||||| |||| |||||
Sbjct: 33289015 gggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgc 33289074

                                                         
Query: 65       gagctctccgccatcacccgaacctcccttggccccaacgg 105
                |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 33289075 gagctctccgccatcacccgcacctccctcggccccaacgg 33289115



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                            
Query: 372      ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 431
                ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 33290018 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33290077

                                                                           
Query: 432      aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 490
                |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 33290078 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33290136



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 451      gaaatctgctgttgcaagca 470
                ||||||||||||||||||||
Sbjct: 26888450 gaaatctgctgttgcaagca 26888431
to top
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score =  325 bits (164), Expect = 8e-86
 Identities = 239/264 (90%)
 Strand = Plus / Plus

                                                                         
Query: 104   ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 163
             ||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 46166 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 46225

                                                                         
Query: 164   acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 223
             ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 46226 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 46285

                                                                         
Query: 224   agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 283
             || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 46286 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 46345

                                                                         
Query: 284   ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 343
             ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 46346 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 46405

                                     
Query: 344   gggtataccaaggccattaataag 367
             || || ||||||||||||||||||
Sbjct: 46406 ggctacaccaaggccattaataag 46429



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                         
Query: 5     gggcacaagcatctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgc 64
             ||||||||||| ||||| |||||||| ||||||||||| |||||||||| |||| |||||
Sbjct: 45531 gggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgc 45590

                                                      
Query: 65    gagctctccgccatcacccgaacctcccttggccccaacgg 105
             |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 45591 gagctctccgccatcacccgcacctccctcggccccaacgg 45631



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                         
Query: 372   ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 431
             ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 46534 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 46593

                                                                        
Query: 432   aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 490
             |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 46594 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 46652
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  325 bits (164), Expect = 8e-86
 Identities = 239/264 (90%)
 Strand = Plus / Plus

                                                                            
Query: 104      ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 163
                ||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 33380160 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33380219

                                                                            
Query: 164      acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 223
                ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 33380220 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33380279

                                                                            
Query: 224      agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 283
                || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 33380280 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33380339

                                                                            
Query: 284      ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 343
                ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 33380340 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33380399

                                        
Query: 344      gggtataccaaggccattaataag 367
                || || ||||||||||||||||||
Sbjct: 33380400 ggctacaccaaggccattaataag 33380423



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                            
Query: 5        gggcacaagcatctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgc 64
                ||||||||||| ||||| |||||||| ||||||||||| |||||||||| |||| |||||
Sbjct: 33379525 gggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgc 33379584

                                                         
Query: 65       gagctctccgccatcacccgaacctcccttggccccaacgg 105
                |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 33379585 gagctctccgccatcacccgcacctccctcggccccaacgg 33379625



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                            
Query: 372      ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 431
                ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 33380528 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33380587

                                                                           
Query: 432      aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 490
                |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 33380588 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33380646



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 451      gaaatctgctgttgcaagca 470
                ||||||||||||||||||||
Sbjct: 26979773 gaaatctgctgttgcaagca 26979754
to top
>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0549G05, complete sequence
          Length = 147182

 Score =  139 bits (70), Expect = 1e-29
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                         
Query: 108   tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 167
             ||||||||||||||||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 63668 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 63727

                                                           
Query: 168   tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 213
             | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 63728 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 63773



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                         
Query: 237   aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 295
             ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 63788 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 63847

                                                       
Query: 296   gctgaggagctcatcaggatgggactgcatccaagtgagatc 337
             ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 63848 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 63889
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  139 bits (70), Expect = 1e-29
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                            
Query: 108      tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 167
                ||||||||||||||||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 20942056 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 20942115

                                                              
Query: 168      tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 213
                | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 20942116 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 20942161



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 237      aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 295
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 20942176 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 20942235

                                                          
Query: 296      gctgaggagctcatcaggatgggactgcatccaagtgagatc 337
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 20942236 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 20942277



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 54      gcgccggccgcgagctctccgcc 76
               |||||||||||||||||||||||
Sbjct: 9499074 gcgccggccgcgagctctccgcc 9499052
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  139 bits (70), Expect = 1e-29
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                            
Query: 108      tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 167
                ||||||||||||||||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 21252291 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 21252350

                                                              
Query: 168      tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 213
                | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21252351 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 21252396



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 237      aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 295
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 21252411 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 21252470

                                                          
Query: 296      gctgaggagctcatcaggatgggactgcatccaagtgagatc 337
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 21252471 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 21252512



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 54      gcgccggccgcgagctctccgcc 76
               |||||||||||||||||||||||
Sbjct: 9570771 gcgccggccgcgagctctccgcc 9570749
to top
>emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZF10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2049

 Score =  117 bits (59), Expect = 4e-23
 Identities = 221/275 (80%)
 Strand = Plus / Plus

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           ||||||||| |||| || || ||||| || || ||||| ||||||||||||||||| || 
Sbjct: 257 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataagatggttatc 316

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| |||
Sbjct: 317 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 376

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
            | |||||||| |||||||| || |||||  | ||||| |  || || || || || |||
Sbjct: 377 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 436

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || ||||||||||| || || || || || || |||||||| ||  | || |||||||||
Sbjct: 437 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 496

                                              
Query: 305 ctcatcaggatgggactgcatccaagtgagatcat 339
           || |||||||||||||| ||||| |||||||||||
Sbjct: 497 cttatcaggatgggacttcatccgagtgagatcat 531



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 458 gctgttgcaagcaagcaatttggccaggagga 489
           ||||||||||||||||| ||||| || |||||
Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681
to top
>ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein binding AT3G03960 mRNA,
           complete cds
          Length = 2054

 Score =  109 bits (55), Expect = 9e-21
 Identities = 220/275 (80%)
 Strand = Plus / Plus

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || 
Sbjct: 257 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 316

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| |||
Sbjct: 317 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 376

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
            | |||||||| |||||||| || |||||  | ||||| |  || || || || || |||
Sbjct: 377 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 436

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || ||||||||||| || || || || || || |||||||| ||  | || |||||||||
Sbjct: 437 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 496

                                              
Query: 305 ctcatcaggatgggactgcatccaagtgagatcat 339
           || |||||||||||||| ||||| |||||||||||
Sbjct: 497 cttatcaggatgggacttcatccgagtgagatcat 531



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 458 gctgttgcaagcaagcaatttggccaggagga 489
           ||||||||||||||||| ||||| || |||||
Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681
to top
>gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds
          Length = 1650

 Score =  109 bits (55), Expect = 9e-21
 Identities = 220/275 (80%)
 Strand = Plus / Plus

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || 
Sbjct: 112 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 171

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| |||
Sbjct: 172 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 231

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
            | |||||||| |||||||| || |||||  | ||||| |  || || || || || |||
Sbjct: 232 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 291

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || ||||||||||| || || || || || || |||||||| ||  | || |||||||||
Sbjct: 292 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 351

                                              
Query: 305 ctcatcaggatgggactgcatccaagtgagatcat 339
           || |||||||||||||| ||||| |||||||||||
Sbjct: 352 cttatcaggatgggacttcatccgagtgagatcat 386



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 458 gctgttgcaagcaagcaatttggccaggagga 489
           ||||||||||||||||| ||||| || |||||
Sbjct: 505 gctgttgcaagcaagcagtttgggcaagagga 536
to top
>gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex protein 1, theta subunit;
           TCP-1-Theta (T11I18.7) mRNA, complete cds
          Length = 1932

 Score =  109 bits (55), Expect = 9e-21
 Identities = 220/275 (80%)
 Strand = Plus / Plus

                                                                       
Query: 65  gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 124
           ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || 
Sbjct: 252 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 311

                                                                       
Query: 125 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 184
           |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| |||
Sbjct: 312 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 371

                                                                       
Query: 185 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 244
            | |||||||| |||||||| || |||||  | ||||| |  || || || || || |||
Sbjct: 372 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 431

                                                                       
Query: 245 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 304
           || ||||||||||| || || || || || || |||||||| ||  | || |||||||||
Sbjct: 432 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 491

                                              
Query: 305 ctcatcaggatgggactgcatccaagtgagatcat 339
           || |||||||||||||| ||||| |||||||||||
Sbjct: 492 cttatcaggatgggacttcatccgagtgagatcat 526



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 458 gctgttgcaagcaagcaatttggccaggagga 489
           ||||||||||||||||| ||||| || |||||
Sbjct: 645 gctgttgcaagcaagcagtttgggcaagagga 676
to top
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence,
             complete sequence
          Length = 63654

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 189/236 (80%)
 Strand = Plus / Plus

                                                                         
Query: 104   ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 163
             ||||||||||| ||||| || |||||| | ||||| || ||| |||| ||||| ||||| 
Sbjct: 21435 ggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgacgctgct 21494

                                                                         
Query: 164   acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 223
             || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | ||||| 
Sbjct: 21495 actatagtgaatgagctcgagattcagcacccggctgctaaacttctggttttagctgct 21554

                                                                         
Query: 224   agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 283
             |  || || || || || ||||| ||||||||||| || || || || || || ||||||
Sbjct: 21555 aaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgctggtgaa 21614

                                                                     
Query: 284   ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcat 339
             || ||  | || ||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 21615 cttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatcat 21670



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 458   gctgttgcaagcaagcaatttggccaggagga 489
             ||||||||||||||||| ||||| || |||||
Sbjct: 21877 gctgttgcaagcaagcagtttgggcaagagga 21908
to top
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023,
             complete sequence
          Length = 91039

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                         
Query: 107   atgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaaca 166
             |||||||||||||| ||||||||| | |||||||| ||| |||||||||| || || |||
Sbjct: 77620 atgaataagatggttattaatcatttggacaagctttttgtcacgaatgacgccgctaca 77561

                                                
Query: 167   atcgtgaacgagcttgaggtccagcaccctgctgc 201
             || ||||| |||||||| || ||||| ||||||||
Sbjct: 77560 attgtgaatgagcttgaagttcagcatcctgctgc 77526



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 296   gctgaggagctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaa 354
             ||||||||||| |||||||||||  |||| || || |||||||||| ||| ||||||||
Sbjct: 77431 gctgaggagcttatcaggatgggtttgcacccgagcgagatcatcagtggatataccaa 77373
to top
>ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin
           containing TCP1, subunit 8 (theta) (LOC583086), partial
           mRNA
          Length = 1407

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 107 atgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaaca 166
           ||||||||||||||||| || ||  |||| ||||||||| |||| ||||| |||||||| 
Sbjct: 112 atgaataagatggtcatcaaccacatagagaagctctttgtcacaaatgacgctgcaacc 171

                                                  
Query: 167 atcgtgaacgagcttgaggtccagcaccctgctgctaag 205
           ||  | || ||| | ||||| ||||||||||||||||||
Sbjct: 172 attctcaaagagttggaggttcagcaccctgctgctaag 210
to top
>gb|AY393846.1| Gallus gallus chaperonin subunit 8 theta mRNA, complete cds
          Length = 1647

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 98  cccaacggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgat 157
           ||||| |||||||| || ||||| || |||||||| || ||||| ||| | || ||||||
Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204

                                                       
Query: 158 gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 201
           ||||| || ||| |||  ||| | ||||||||||| ||||||||
Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248
to top
>ref|NM_001004389.1| Gallus gallus chaperonin containing TCP1, subunit 8 (theta) (CCT8),
           mRNA
          Length = 1647

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 98  cccaacggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgat 157
           ||||| |||||||| || ||||| || |||||||| || ||||| ||| | || ||||||
Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204

                                                       
Query: 158 gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 201
           ||||| || ||| |||  ||| | ||||||||||| ||||||||
Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248
to top
>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0037P02 map E61794SA, complete sequence
          Length = 131645

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 54    gcgccggccgcgagctctccgcc 76
             |||||||||||||||||||||||
Sbjct: 52257 gcgccggccgcgagctctccgcc 52235
to top
>ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
            (FG05619.1) partial mRNA
          Length = 5052

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 284  ctgctcgagaaggctgaggagctcatc 310
            ||||||||||||||||| |||||||||
Sbjct: 3939 ctgctcgagaaggctgatgagctcatc 3913
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 54       gcgccggccgcgagctctccgcc 76
                |||||||||||||||||||||||
Sbjct: 24674916 gcgccggccgcgagctctccgcc 24674894
to top
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 54    gcgccggccgcgagctctccgcc 76
             |||||||||||||||||||||||
Sbjct: 64439 gcgccggccgcgagctctccgcc 64417
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 48      acatcggcgccggccgcgagc 68
               |||||||||||||||||||||
Sbjct: 1476880 acatcggcgccggccgcgagc 1476860
to top
>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding
           AT3G20050 (ATTCP-1) mRNA, complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 gaggtccagcaccctgctgctaag 205
           |||||| |||||||||||||||||
Sbjct: 340 gaggtcgagcaccctgctgctaag 363
to top
>ref|XM_525933.1| PREDICTED: Pan troglodytes similar to Polyadenylate-binding protein
           1 (Poly(A)-binding protein 1) (PABP 1) (LOC470552), mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 471 agcaatttggccaggaggat 490
           ||||||||||||||||||||
Sbjct: 729 agcaatttggccaggaggat 710
to top
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence
          Length = 216435

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    ggccaggaggatgtgctgtg 498
              ||||||||||||||||||||
Sbjct: 216156 ggccaggaggatgtgctgtg 216137
to top
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence
          Length = 154520

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    ggccaggaggatgtgctgtg 498
              ||||||||||||||||||||
Sbjct: 123129 ggccaggaggatgtgctgtg 123110
to top
>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   agctcatcaggatgggactg 322
             ||||||||||||||||||||
Sbjct: 86843 agctcatcaggatgggactg 86824
to top
>gb|BC033032.1| Homo sapiens cDNA clone IMAGE:5268495
          Length = 2657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 1278 agcaatttggccaggaggat 1259
to top
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ggccgtcctgaagaacatcg 53
              ||||||||||||||||||||
Sbjct: 221751 ggccgtcctgaagaacatcg 221732
to top
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   gaaatctgctgttgcaagca 470
             ||||||||||||||||||||
Sbjct: 67450 gaaatctgctgttgcaagca 67431
to top
>gb|BC068242.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2, mRNA
            (cDNA clone MGC:51329 IMAGE:5267930), complete cds
          Length = 3313

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 1027 agcaatttggccaggaggat 1008
to top
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
              flanking regions
          Length = 116831

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     acatcggcgccggccgcgag 67
              ||||||||||||||||||||
Sbjct: 102048 acatcggcgccggccgcgag 102067
to top
>emb|X74334.1|AEFHPG A.eutrophus fhp gene for flavohemoprotein
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  ggccgtcctgaagaacatcg 53
           ||||||||||||||||||||
Sbjct: 389 ggccgtcctgaagaacatcg 408
to top
>ref|NM_058568.2| Caenorhabditis elegans Y39G10AR.17 (Y39G10AR.17) mRNA, complete cds
          Length = 1650

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  tcgggcctcgacgaggccgt 39
           ||||||||||||||||||||
Sbjct: 610 tcgggcctcgacgaggccgt 591
to top
>ref|NG_001267.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2
            (PABPCP2) on chromosome 14
          Length = 3258

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 1815 agcaatttggccaggaggat 1796
to top
>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively
             spliced
          Length = 227735

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ctgcatccaagtgagatcat 339
             ||||||||||||||||||||
Sbjct: 38581 ctgcatccaagtgagatcat 38600
to top
>gb|AF132027.1|AF132027 Homo sapiens poly(A)-binding protein-related mRNA
          Length = 1909

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 1294 agcaatttggccaggaggat 1275
to top
>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZH05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1961

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 gaggtccagcaccctgctgctaag 205
           |||||| |||||||||||||||||
Sbjct: 324 gaggtcgagcaccctgctgctaag 347
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     tccagcaccctgctgctaag 205
               ||||||||||||||||||||
Sbjct: 2085050 tccagcaccctgctgctaag 2085069
to top
>gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, complete sequence
          Length = 175556

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 8910 agcaatttggccaggaggat 8891
to top
>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ctgcatccaagtgagatcat 339
             ||||||||||||||||||||
Sbjct: 88636 ctgcatccaagtgagatcat 88655
to top
>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence
          Length = 132558

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    tcgggcctcgacgaggccgt 39
             ||||||||||||||||||||
Sbjct: 99514 tcgggcctcgacgaggccgt 99533
to top
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21
          Length = 83253

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   gaggtccagcaccctgctgctaag 205
             |||||| |||||||||||||||||
Sbjct: 21891 gaggtcgagcaccctgctgctaag 21868
to top
>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete
           cds
          Length = 2024

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 gaggtccagcaccctgctgctaag 205
           |||||| |||||||||||||||||
Sbjct: 339 gaggtcgagcaccctgctgctaag 362
to top
>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds
          Length = 6533

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 182  gaggtccagcaccctgctgctaag 205
            |||||| |||||||||||||||||
Sbjct: 2285 gaggtcgagcaccctgctgctaag 2308
to top
>gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermosome subunit gene,
           partial cds
          Length = 700

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 182 gaggtccagcaccctgctgctaagctcctggt 213
           ||||| ||||||||||| || |||||||||||
Sbjct: 259 gaggttcagcaccctgccgcgaagctcctggt 290
to top
>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050)
           mRNA, complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 gaggtccagcaccctgctgctaag 205
           |||||| |||||||||||||||||
Sbjct: 338 gaggtcgagcaccctgctgctaag 361
to top
>emb|BX908390.7| Zebrafish DNA sequence from clone CH211-113C15 in linkage group 18,
             complete sequence
          Length = 31676

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   ttgcaagcaagcaatttggc 481
             ||||||||||||||||||||
Sbjct: 27148 ttgcaagcaagcaatttggc 27129
to top
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18,
             complete sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   ttgcaagcaagcaatttggc 481
             ||||||||||||||||||||
Sbjct: 99278 ttgcaagcaagcaatttggc 99297
to top
>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds
          Length = 1718

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 gaggtccagcaccctgctgctaag 205
           |||||| |||||||||||||||||
Sbjct: 256 gaggtcgagcaccctgctgctaag 279
to top
>gb|U60801.1|HSU60801 Human poly(A)-binding protein (PABP) processed pseudogene2, complete
            cds
          Length = 3258

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  agcaatttggccaggaggat 490
            ||||||||||||||||||||
Sbjct: 1815 agcaatttggccaggaggat 1796
to top
>dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock protein, complete cds
          Length = 1838

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tccagcaccctgctgctaag 205
           ||||||||||||||||||||
Sbjct: 319 tccagcaccctgctgctaag 338
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 23      ggcctcgacgaggccgtcct 42
               ||||||||||||||||||||
Sbjct: 2379747 ggcctcgacgaggccgtcct 2379766
to top
>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence
          Length = 179265

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ggccaggaggatgtgctgtg 498
             ||||||||||||||||||||
Sbjct: 18324 ggccaggaggatgtgctgtg 18305
to top
>dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 2030

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tccagcaccctgctgctaag 205
           ||||||||||||||||||||
Sbjct: 428 tccagcaccctgctgctaag 447
to top
>dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tccagcaccctgctgctaag 205
           ||||||||||||||||||||
Sbjct: 368 tccagcaccctgctgctaag 387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,764,491
Number of Sequences: 3902068
Number of extensions: 3764491
Number of successful extensions: 68332
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67812
Number of HSP's gapped (non-prelim): 519
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top