| Clone Name | baal2n13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 119 bits (60), Expect = 3e-24 Identities = 108/123 (87%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 acaacgccaccggcgcccgggtcaccaccacaagncctcgtcatccacgagatggactcc 60 ||||||||||| |||||||||||| | ||| || | ||||| ||||||||||||||||| Sbjct: 1972 acaacgccaccagcgcccgggtcaacgtcacgaggc-tcgtcgtccacgagatggactcc 2030 Query: 61 tcctacaaccaggcctacactgcctcactgtaaaaacaaaatggaaattttatttttgtt 120 |||||||| |||||||||| |||||||||||||| |||||| |||| ||||||||||| Sbjct: 2031 tcctacaatcaggcctacatgacctcactgtaaaaagaaaatgcaaatattatttttgtt 2090 Query: 121 tag 123 ||| Sbjct: 2091 tag 2093
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 73.8 bits (37), Expect = 2e-10 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 acaacgccaccggcgcccgggtcaccaccacaagncctcgtcatccacgagatggactcc 60 ||||||||||||| |||||||||||| |||| || | ||||| |||| ||||||||| || Sbjct: 2008 acaacgccaccggtgcccgggtcaccgccaccagtc-tcgtcgtccatgagatggacccc 2066 Query: 61 tcctacaaccag 72 |||||||||||| Sbjct: 2067 tcctacaaccag 2078
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 71.9 bits (36), Expect = 7e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 36 cctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 ||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 1926 cctcgtcgtccacgagatggactcctcctacaaccaagcctaca 1969
>gb|AY023475.1| Oryza sativa microsatellite MRG5800 containing (TCT)X8, closest to marker C1357, genomic sequence Length = 224 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 43 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 85
>gb|AY575557.1| Oryza sativa (indica cultivar-group) cultivar IR64 vacuolar invertase 2 mRNA, partial cds Length = 503 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 217 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 259
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 346469 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 346511
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 3516 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 3558
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 75253 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 75295
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaaccaggcctaca 79 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 2037 ctcgtcgtccacgagatggactcctcctacaaccaagcctaca 2079
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 49 gagatggactcctcctacaaccaggcctacactgcctcactgtaaaaa 96 |||||||||| ||||||||| |||||||||| || |||||||||||| Sbjct: 2123 gagatggacttctcctacaatcaggcctacatggcttcactgtaaaaa 2170
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaacca 71 |||||| |||||||||||||||| ||||||||||| Sbjct: 1864 ctcgtcgtccacgagatggactcgtcctacaacca 1898
>gb|AF083856.1|AF083856 Saccharum hybrid cultivar H65-7052 soluble acid invertase (scinvh3'2) mRNA, partial cds Length = 1402 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaacca 71 |||||| |||||||||||||||| ||||||||||| Sbjct: 972 ctcgtcgtccacgagatggactcgtcctacaacca 1006
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaacca 71 |||||| |||||||||||||||| ||||||||||| Sbjct: 1645 ctcgtcgtccacgagatggactcgtcctacaacca 1679
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 37 ctcgtcatccacgagatggactcctcctacaacca 71 |||||| |||||||||||||||| ||||||||||| Sbjct: 1645 ctcgtcgtccacgagatggactcgtcctacaacca 1679
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 50.1 bits (25), Expect = 0.003 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1 acaacgccaccggcgcccgggtcaccaccac-aagncctcgtcatccacgagatggactc 59 |||||||||||| ||| |||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 1604 acaacgccaccgccgcgcgggtcacggccacgaag--ctcgtcgtccacgagatggactc 1661 Query: 60 ctcctacaacca 71 || |||||||| Sbjct: 1662 gtcatacaacca 1673
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 50.1 bits (25), Expect = 0.003 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1 acaacgccaccggcgcccgggtcaccaccac-aagncctcgtcatccacgagatggactc 59 |||||||||||| ||| |||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 1444 acaacgccaccgccgcgcgggtcacggccacgaag--ctcgtcgtccacgagatggactc 1501 Query: 60 ctcctacaacca 71 || |||||||| Sbjct: 1502 gtcatacaacca 1513
>gb|U31451.1|ZMU31451 Zea mays invertase mRNA, partial cds Length = 1530 Score = 50.1 bits (25), Expect = 0.003 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1 acaacgccaccggcgcccgggtcaccaccac-aagncctcgtcatccacgagatggactc 59 |||||||||||| ||| |||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 1430 acaacgccaccgccgcgcgggtcacggccacgaag--ctcgtcgtccacgagatggactc 1487 Query: 60 ctcctacaacca 71 || |||||||| Sbjct: 1488 gtcatacaacca 1499
>gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosome 7, complete sequence Length = 198721 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttatttttgtt 120 ||||||||||||||||||||||| Sbjct: 172674 aaaatggaaattttatttttgtt 172652
>emb|AL606834.1|CNS07EGV Human chromosome 14 DNA sequence BAC R-248J18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179138 Score = 46.1 bits (23), Expect = 0.042 Identities = 26/27 (96%) Strand = Plus / Minus Query: 91 taaaaacaaaatggaaattttattttt 117 |||||| |||||||||||||||||||| Sbjct: 144703 taaaaataaaatggaaattttattttt 144677
>gb|AC164171.5| Mus musculus 10 BAC RP24-574G7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147660 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 acaaaatggaaattttattttt 117 |||||||||||||||||||||| Sbjct: 70022 acaaaatggaaattttattttt 70001
>gb|AC087481.9| Homo sapiens chromosome 15, clone RP11-540B6, complete sequence Length = 179400 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 taaaaacaaaatggaaattttatttt 116 ||||||||||||| |||||||||||| Sbjct: 158481 taaaaacaaaatgcaaattttatttt 158456
>dbj|AK137924.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130039P07 product:unclassifiable, full insert sequence Length = 5926 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 acaaaatggaaattttattttt 117 |||||||||||||||||||||| Sbjct: 2528 acaaaatggaaattttattttt 2549
>gb|AY589066.1| Decaschistia byrnesii maturase K gene, complete cds; chloroplast Length = 2523 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 aaaaacaaaatggaaattttattttt 117 ||||| |||||||||||||||||||| Sbjct: 2269 aaaaaaaaaatggaaattttattttt 2294
>gb|AC004460.1|AC004460 Homo sapiens PAC clone RP5-1086D14, complete sequence Length = 113803 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 taaaaacaaaatggaaattttatttt 116 ||||||||||||| |||||||||||| Sbjct: 86700 taaaaacaaaatgcaaattttatttt 86725
>gb|AF036700.1| Caenorhabditis elegans cosmid M04G7, complete sequence Length = 41778 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 aatggaaattttatttttgtt 120 ||||||||||||||||||||| Sbjct: 14882 aatggaaattttatttttgtt 14902
>emb|AJ400815.1|STU400815 Solanum tuberosum mRNA for putative tropinone reductase (TR gene) Length = 976 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||||| |||||||||||| Sbjct: 447 caaaatggaaatgttatttttgttt 471
>emb|AJ307584.1|STU307584 Solanum tuberosum mRNA for tropinone reductase I (TRI gene) Length = 795 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||||| |||||||||||| Sbjct: 418 caaaatggaaatgttatttttgttt 442
>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence Length = 110295 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||||||||| |||||||| Sbjct: 74808 caaaatggaaattttagttttgttt 74784
>gb|AC022106.5| Homo sapiens chromosome 5 clone CTC-311G1, complete sequence Length = 149790 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 aaaaacaaaatggaaatttta 112 ||||||||||||||||||||| Sbjct: 93025 aaaaacaaaatggaaatttta 93005
>gb|AC124908.3| Equus caballus clone CH241-67M21, complete sequence Length = 170710 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||| |||||||||||||| Sbjct: 21795 caaaatggaatttttatttttgttt 21771
>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence Length = 169374 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cactgcctcactgtaaaaacaaaat 102 |||||||||| |||||||||||||| Sbjct: 131872 cactgcctcaatgtaaaaacaaaat 131848
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||||||||| |||||||| Sbjct: 1167431 caaaatggaaattttagttttgttt 1167407
>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165126 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 aaaaacaaaatggaaatttta 112 ||||||||||||||||||||| Sbjct: 31679 aaaaacaaaatggaaatttta 31699
>dbj|AK116940.1| Ciona intestinalis cDNA, clone:cits006j10, full insert sequence Length = 1875 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 aacaaaatggaaattttattt 115 ||||||||||||||||||||| Sbjct: 1346 aacaaaatggaaattttattt 1326
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 caaaatggaaattttatttttgttt 121 |||||||||| |||||||||||||| Sbjct: 1257487 caaaatggaatttttatttttgttt 1257463
>emb|AL845279.4| Mouse DNA sequence from clone RP23-2E13 on chromosome X, complete sequence Length = 29952 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaattttattttt 117 |||||| |||||||||||||||||| Sbjct: 10272 aaaacagaatggaaattttattttt 10296
>gb|AC007808.5| Drosophila melanogaster clone BACR18C01, complete sequence Length = 167195 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 actgtaaaaacaaaatggaaattt 110 |||||||||||| ||||||||||| Sbjct: 84056 actgtaaaaacagaatggaaattt 84033
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ccaccggcgcccgggtcaccacca 30 ||||||||||| |||||||||||| Sbjct: 2799779 ccaccggcgcctgggtcaccacca 2799802
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aaaaacaaaatggaaatttt 111 |||||||||||||||||||| Sbjct: 145267 aaaaacaaaatggaaatttt 145248
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 gagatggactcctcctacaaccag 72 ||||||||||| |||||||||||| Sbjct: 1944 gagatggactcgtcctacaaccag 1967
>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence Length = 193593 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 151841 aaaacaaaatggaaatttta 151860
>gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence Length = 197096 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 atagatagctctttgtactt 154 |||||||||||||||||||| Sbjct: 35388 atagatagctctttgtactt 35369
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tggaaattttatttttgttt 121 |||||||||||||||||||| Sbjct: 139490 tggaaattttatttttgttt 139509
>emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on chromosome 9, complete sequence Length = 104596 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 aaaaacaaaatggaaattttattt 115 ||||| |||||||||||||||||| Sbjct: 51395 aaaaataaaatggaaattttattt 51372
>emb|AL353801.13| Human DNA sequence from clone RP11-285G1 on chromosome 10 Contains two novel genes, the gene for AD037 protein (AD037), the gene for a decidual protein induced by progesterone (DEPP), a novel gene (FLJ30567), the ZNF22 gene for zinc finger protein 22 (KOX 15), a novel gene and two CpG islands, complete sequence Length = 222490 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 caaaatggaaattttatttt 116 |||||||||||||||||||| Sbjct: 217012 caaaatggaaattttatttt 217031
>gb|AC083845.15| Homo sapiens, clone RP11-459L5, complete sequence Length = 132843 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaattttatttttgtt 120 |||| |||||||| |||||||||||||| Sbjct: 23413 aaaataaaatggagattttatttttgtt 23440
>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence Length = 211119 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tggaaattttatttttgttt 121 |||||||||||||||||||| Sbjct: 43611 tggaaattttatttttgttt 43630
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ccaccggcgcccgggtcaccacca 30 ||||||||||| |||||||||||| Sbjct: 31255 ccaccggcgcctgggtcaccacca 31278
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 208697 aaaacaaaatggaaatttta 208716
>gb|BC040565.1| Homo sapiens hypothetical protein LOC339751, mRNA (cDNA clone IMAGE:5266974) Length = 2561 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 aaaaacaaaatggaaattttatttttgt 119 ||||| ||||||||| |||||||||||| Sbjct: 2242 aaaaagaaaatggaatttttatttttgt 2269
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ccaccggcgcccgggtcaccacca 30 ||||||||||| |||||||||||| Sbjct: 260080 ccaccggcgcctgggtcaccacca 260103
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 100842 aaaatggaaattttattttt 100861 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 100481 aaaatggaaattttattttt 100500 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 100120 aaaatggaaattttattttt 100139 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 99758 aaaatggaaattttattttt 99777
>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 20278 aaaatggaaattttattttt 20259 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 19916 aaaatggaaattttattttt 19897 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 19555 aaaatggaaattttattttt 19536 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 19194 aaaatggaaattttattttt 19175
>gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence Length = 194187 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 caaaatggaaattttatttt 116 |||||||||||||||||||| Sbjct: 86726 caaaatggaaattttatttt 86745
>gb|AC098974.2| Homo sapiens chromosome 3 clone RP11-320M6, complete sequence Length = 185761 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ggaaattttatttttgttta 122 |||||||||||||||||||| Sbjct: 28197 ggaaattttatttttgttta 28178
>gb|AC093027.12| Homo sapiens 12q BAC RP11-701B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162322 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 156013 aaaatggaaattttattttt 156032
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 47004 aaaatggaaattttattttt 47023
>gb|AC007718.12| Homo sapiens chromosome 8, clone RP11-29A2, complete sequence Length = 149965 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 71692 aaaacaaaatggaaatttta 71673
>gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, complete sequence Length = 109851 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 89646 aaaatggaaattttattttt 89627
>gb|AF350618.1|AF350618 Erycina pumilio maturase (matK) gene, partial cds; chloroplast gene for chloroplast product Length = 1352 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 818 aaaatggaaattttattttt 837
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 gagatggactcctcctacaaccag 72 ||||||||||| |||||||||||| Sbjct: 1556 gagatggactcgtcctacaaccag 1579
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 gccaccggcgcccgggtcaccacc 29 |||| ||||||||||||||||||| Sbjct: 3419312 gccagcggcgcccgggtcaccacc 3419289
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acaacgccaccggcgcccgg 20 |||||||||||||||||||| Sbjct: 24600235 acaacgccaccggcgcccgg 24600216
>gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, complete sequence Length = 181942 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgtaaaaacaaaatggaaat 108 |||||||||||||||||||| Sbjct: 19017 tgtaaaaacaaaatggaaat 18998
>gb|AC009958.3| Homo sapiens BAC clone RP11-316G9 from 2, complete sequence Length = 211201 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 tgtaaaaacaaaatggaaattttatttt 116 ||||||||||||||||| |||| ||||| Sbjct: 25568 tgtaaaaacaaaatggacatttgatttt 25541
>gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146853 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aaaaacaaaatggaaatttt 111 |||||||||||||||||||| Sbjct: 68821 aaaaacaaaatggaaatttt 68802
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gccaccggcgcccgggtcac 25 |||||||||||||||||||| Sbjct: 2769309 gccaccggcgcccgggtcac 2769290
>gb|AC020547.7| Homo sapiens BAC clone RP11-134F3 from 2, complete sequence Length = 167739 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 101564 aaaacaaaatggaaatttta 101583
>gb|AC013461.9| Homo sapiens BAC clone RP11-291G2 from 2, complete sequence Length = 107121 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 aaaaacaaaatggaaattttatttttgt 119 ||||| ||||||||| |||||||||||| Sbjct: 48336 aaaaagaaaatggaatttttatttttgt 48309
>gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, complete sequence Length = 203148 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaattttatttttgtt 120 |||| |||||||| |||||||||||||| Sbjct: 146992 aaaataaaatggagattttatttttgtt 147019
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acaacgccaccggcgcccgg 20 |||||||||||||||||||| Sbjct: 56302 acaacgccaccggcgcccgg 56283
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acaacgccaccggcgcccgg 20 |||||||||||||||||||| Sbjct: 93529 acaacgccaccggcgcccgg 93510
>gb|U80953.1| Caenorhabditis elegans cosmid B0412, complete sequence Length = 33975 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tggaaattttatttttgttt 121 |||||||||||||||||||| Sbjct: 12244 tggaaattttatttttgttt 12225
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 caaccaggcctacactgcct 85 |||||||||||||||||||| Sbjct: 58704 caaccaggcctacactgcct 58723
>gb|AE003706.5| Drosophila melanogaster chromosome 3R, section 44 of 118 of the complete sequence Length = 270961 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 actgtaaaaacaaaatggaaattt 110 |||||||||||| ||||||||||| Sbjct: 57357 actgtaaaaacagaatggaaattt 57334
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 89783 aaaatggaaattttattttt 89802 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 89422 aaaatggaaattttattttt 89441 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 89061 aaaatggaaattttattttt 89080 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaatggaaattttattttt 117 |||||||||||||||||||| Sbjct: 88699 aaaatggaaattttattttt 88718
>gb|AC076974.33| Mus musculus strain C57BL/6J chromosome 8 clone rp23-267j18, complete sequence Length = 211075 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 88937 aaaacaaaatggaaatttta 88956
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aaaacaaaatggaaatttta 112 |||||||||||||||||||| Sbjct: 3504508 aaaacaaaatggaaatttta 3504489
>emb|AL031770.12|HS20B11 Human DNA sequence from clone RP1-20B11 on chromosome 6p25.1-25.3, complete sequence Length = 140385 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 caaaatggaaattttatttt 116 |||||||||||||||||||| Sbjct: 86067 caaaatggaaattttatttt 86048
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 tgtaaaaacaaaatggaaattttatttt 116 ||||||||||||||||| |||| ||||| Sbjct: 177756 tgtaaaaacaaaatggacatttgatttt 177729
>emb|CR925877.9| Zebrafish DNA sequence from clone DKEY-71B4 in linkage group 1, complete sequence Length = 73246 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 aaaatggaaattttatttttgttt 121 |||||||||| ||||||||||||| Sbjct: 28940 aaaatggaaactttatttttgttt 28917 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 aaaatggaaattttatttttgttt 121 |||||||||| ||||||||||||| Sbjct: 15400 aaaatggaaactttatttttgttt 15377
>dbj|AP001242.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:KB225F1 Length = 42854 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 tgtaaaaacaaaatggaaattttatttt 116 ||||||||||||||||| |||| ||||| Sbjct: 35249 tgtaaaaacaaaatggacatttgatttt 35222
>dbj|AP001236.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos656 Length = 38490 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 tgtaaaaacaaaatggaaattttatttt 116 ||||||||||||||||| |||| ||||| Sbjct: 32549 tgtaaaaacaaaatggacatttgatttt 32576 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,776,254 Number of Sequences: 3902068 Number of extensions: 2776254 Number of successful extensions: 265731 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 264879 Number of HSP's gapped (non-prelim): 847 length of query: 205 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 183 effective length of database: 17,147,199,772 effective search space: 3137937558276 effective search space used: 3137937558276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)