ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
2gb|AY596561.1| Saccharum officinarum clone SCRFLR1012F07, comple... 222 9e-55
3gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome... 202 8e-49
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
5ref|NM_124599.3| Arabidopsis thaliana unknown protein AT5G52200 ... 58 3e-05
6gb|AY116938.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, co... 58 3e-05
7gb|AY050347.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, co... 58 3e-05
8emb|BX833610.1|CNS0A0C3 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
9dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 3e-05
10emb|AJ326958.1|HSA326958 Homo sapiens genomic sequence surroundi... 46 0.11
11gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, com... 44 0.44
12gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, comp... 44 0.44
13emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chro... 42 1.7
14emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 42 1.7
15emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chr... 42 1.7
16gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosom... 40 6.8
17gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, co... 40 6.8
18gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 6.8
19gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, comp... 40 6.8
20gb|BC042340.1| Xenopus laevis LIM domain binding 3, mRNA (cDNA c... 40 6.8
21gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, compl... 40 6.8
22gb|BT023757.1| Drosophila melanogaster RE56180 full insert cDNA 40 6.8
23emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chrom... 40 6.8
24dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, c... 40 6.8
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.8
26gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 40 6.8
27gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell ... 40 6.8
28ref|NM_206671.1| Drosophila melanogaster AP-1 CG9113-RE, transcr... 40 6.8
29ref|NM_176718.1| Drosophila melanogaster AP-1 CG9113-RD, transcr... 40 6.8
30ref|NM_176717.1| Drosophila melanogaster AP-1 CG9113-RC, transcr... 40 6.8
31ref|NM_167178.2| Drosophila melanogaster AP-1 CG9113-RB, transcr... 40 6.8
32ref|NM_132299.3| Drosophila melanogaster AP-1 CG9113-RA, transcr... 40 6.8
33gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosom... 40 6.8
34gb|AC159187.2| Mus musculus BAC clone RP24-226L7 from chromosome... 40 6.8
35gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete s... 40 6.8
36gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.8
37gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chrom... 40 6.8
38gb|AC008462.6|AC008462 Homo sapiens chromosome 5 clone CTC-352J1... 40 6.8
39gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, comp... 40 6.8
40gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 6.8
41gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.8
42gb|AC004074.1|AC004074 Homo Sapiens Chromosome X clone bWXD759, ... 40 6.8
43emb|CT009682.6| Mouse DNA sequence from clone RP23-136H15 on chr... 40 6.8 
>dbj|AK073928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073L20, full
           insert sequence
          Length = 1098

 Score =  321 bits (162), Expect = 1e-84
 Identities = 258/290 (88%)
 Strand = Plus / Plus

                                                                       
Query: 212 aatcatgagctcccatcgcgtgaagtggaatgaggacaatctgtatgaaattgaatcaaa 271
           |||||||||||| | ||| |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 235 aatcatgagctctcgtcgtgtgaagtggaatgaagacaacctgtatgagattgaatcaaa 294

                                                                       
Query: 272 caagccagtgaggcagaagataaccgagcccaagacaccgtatcaccctatgatggatga 331
            || || || |||||||||||||| ||||| |||||||| |||||||||||| | |||||
Sbjct: 295 taaacctgttaggcagaagataactgagcctaagacaccatatcaccctatggtagatga 354

                                                                       
Query: 332 agatgggtcactatcaccaacacgccctttcgacaagtgtctagatgagactgttagtgc 391
            ||||||||| | |||||||| || ||||| ||||||||||| ||||||||||||| |||
Sbjct: 355 tgatgggtcattgtcaccaacgcgtccttttgacaagtgtctggatgagactgttaatgc 414

                                                                       
Query: 392 tgaagctatattcactgctttaaatggtgtggcctcttcaagtaaaaatgattcaaagga 451
           ||||||||| || |||||||||||||||||||| |||||||| |||| |||| |||||||
Sbjct: 415 tgaagctattttaactgctttaaatggtgtggcttcttcaagcaaaactgatccaaagga 474

                                                             
Query: 452 tgatgagtgggcatcctcagatgatgatgcagatgccatggaacaggatg 501
           |||||  |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 475 tgatggttgggcatcctcagatgatgatgcagatgccatggaacaagatg 524
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>gb|AY596561.1| Saccharum officinarum clone SCRFLR1012F07, complete sequence
          Length = 1020

 Score =  222 bits (112), Expect = 9e-55
 Identities = 234/274 (85%), Gaps = 3/274 (1%)
 Strand = Plus / Minus

                                                                       
Query: 231 gtgaagtggaatgaggacaatctgtatgaaattgaatcaaacaagccagtgaggcagaag 290
           |||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||
Sbjct: 789 gtgaagtggaatgaggacaatctgtacgaaattgagtcaaacaaaccggtgaggcagaag 730

                                                                       
Query: 291 ataaccgagcccaagacaccgtatcaccctatgatggatgaagatgggtcactatcacca 350
           ||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||| || |||
Sbjct: 729 ataacagagccaaagacaccatatcaccctatgatagatgatgatgggtcactgtcgcca 670

                                                                       
Query: 351 acacgccctttcgacaagtgtctagatgagactgttagtgctgaagctatattcactgct 410
           ||||| ||||||||||| ||||| |||||||||||    ||||||||||| ||  | || 
Sbjct: 669 acacgtcctttcgacaaatgtctcgatgagactgtccaagctgaagctatcttagcggcc 610

                                                                       
Query: 411 ttaaatggtgtggcctct---tcaagtaaaaatgattcaaaggatgatgagtgggcatcc 467
           |||||||||||||| |||   ||||| || |   |||||||||||||||  |||| ||  
Sbjct: 609 ttaaatggtgtggcttcttcatcaagcaatagcaattcaaaggatgatggttggggattg 550

                                             
Query: 468 tcagatgatgatgcagatgccatggaacaggatg 501
           |||||||||||| |||||||||| ||||| ||||
Sbjct: 549 tcagatgatgatacagatgccatagaacaagatg 516
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>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1057_C01, complete sequence
          Length = 142752

 Score =  202 bits (102), Expect = 8e-49
 Identities = 150/166 (90%)
 Strand = Plus / Plus

                                                                         
Query: 336   gggtcactatcaccaacacgccctttcgacaagtgtctagatgagactgttagtgctgaa 395
             |||||| | |||||||| || ||||| ||||||||||| ||||||||||||| |||||||
Sbjct: 89542 gggtcattgtcaccaacgcgtccttttgacaagtgtctggatgagactgttaatgctgaa 89601

                                                                         
Query: 396   gctatattcactgctttaaatggtgtggcctcttcaagtaaaaatgattcaaaggatgat 455
             ||||| || |||||||||||||||||||| |||||||| |||| |||| |||||||||||
Sbjct: 89602 gctattttaactgctttaaatggtgtggcttcttcaagcaaaactgatccaaaggatgat 89661

                                                           
Query: 456   gagtgggcatcctcagatgatgatgcagatgccatggaacaggatg 501
             |  |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 89662 ggttgggcatcctcagatgatgatgcagatgccatggaacaagatg 89707



 Score =  109 bits (55), Expect = 9e-21
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                         
Query: 231   gtgaagtggaatgaggacaatctgtatgaaattgaatcaaacaagccagtgaggcagaag 290
             |||||||||||||| ||||| |||||||| ||||||||||| || || || |||||||||
Sbjct: 89340 gtgaagtggaatgaagacaacctgtatgagattgaatcaaataaacctgttaggcagaag 89399

                                                            
Query: 291   ataaccgagcccaagacaccgtatcaccctatgatggatgaagatgg 337
             ||||| ||||| |||||||| |||||||||||| | ||||| |||||
Sbjct: 89400 ataactgagcctaagacaccatatcaccctatggtagatgatgatgg 89446
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  202 bits (102), Expect = 8e-49
 Identities = 150/166 (90%)
 Strand = Plus / Plus

                                                                            
Query: 336      gggtcactatcaccaacacgccctttcgacaagtgtctagatgagactgttagtgctgaa 395
                |||||| | |||||||| || ||||| ||||||||||| ||||||||||||| |||||||
Sbjct: 13406079 gggtcattgtcaccaacgcgtccttttgacaagtgtctggatgagactgttaatgctgaa 13406138

                                                                            
Query: 396      gctatattcactgctttaaatggtgtggcctcttcaagtaaaaatgattcaaaggatgat 455
                ||||| || |||||||||||||||||||| |||||||| |||| |||| |||||||||||
Sbjct: 13406139 gctattttaactgctttaaatggtgtggcttcttcaagcaaaactgatccaaaggatgat 13406198

                                                              
Query: 456      gagtgggcatcctcagatgatgatgcagatgccatggaacaggatg 501
                |  |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 13406199 ggttgggcatcctcagatgatgatgcagatgccatggaacaagatg 13406244



 Score =  109 bits (55), Expect = 9e-21
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                            
Query: 231      gtgaagtggaatgaggacaatctgtatgaaattgaatcaaacaagccagtgaggcagaag 290
                |||||||||||||| ||||| |||||||| ||||||||||| || || || |||||||||
Sbjct: 13405877 gtgaagtggaatgaagacaacctgtatgagattgaatcaaataaacctgttaggcagaag 13405936

                                                               
Query: 291      ataaccgagcccaagacaccgtatcaccctatgatggatgaagatgg 337
                ||||| ||||| |||||||| |||||||||||| | ||||| |||||
Sbjct: 13405937 ataactgagcctaagacaccatatcaccctatggtagatgatgatgg 13405983
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>ref|NM_124599.3| Arabidopsis thaliana unknown protein AT5G52200 mRNA, complete cds
          Length = 786

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 attgaatcaaacaagccagtgaggcagaagataaccgagcccaagacaccgtatcaccct 320
           |||||||| ||||| || || ||||||||||| || || || |||||||| || ||||| 
Sbjct: 86  attgaatcgaacaaacctgttaggcagaagattactgaaccaaagacaccataccacccg 145

                            
Query: 321 atgatggatgaagatgg 337
           ||||||||||| |||||
Sbjct: 146 atgatggatgatgatgg 162
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>gb|AY116938.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, complete cds
          Length = 576

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 attgaatcaaacaagccagtgaggcagaagataaccgagcccaagacaccgtatcaccct 320
           |||||||| ||||| || || ||||||||||| || || || |||||||| || ||||| 
Sbjct: 55  attgaatcgaacaaacctgttaggcagaagattactgaaccaaagacaccataccacccg 114

                            
Query: 321 atgatggatgaagatgg 337
           ||||||||||| |||||
Sbjct: 115 atgatggatgatgatgg 131
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>gb|AY050347.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, complete cds
          Length = 780

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 attgaatcaaacaagccagtgaggcagaagataaccgagcccaagacaccgtatcaccct 320
           |||||||| ||||| || || ||||||||||| || || || |||||||| || ||||| 
Sbjct: 85  attgaatcgaacaaacctgttaggcagaagattactgaaccaaagacaccataccacccg 144

                            
Query: 321 atgatggatgaagatgg 337
           ||||||||||| |||||
Sbjct: 145 atgatggatgatgatgg 161
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>emb|BX833610.1|CNS0A0C3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL65ZG03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 733

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 attgaatcaaacaagccagtgaggcagaagataaccgagcccaagacaccgtatcaccct 320
           |||||||| ||||| || || ||||||||||| || || || |||||||| || ||||| 
Sbjct: 86  attgaatcgaacaaacctgttaggcagaagattactgaaccaaagacaccataccacccg 145

                            
Query: 321 atgatggatgaagatgg 337
           ||||||||||| |||||
Sbjct: 146 atgatggatgatgatgg 162
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>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19
          Length = 48420

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 261   attgaatcaaacaagccagtgaggcagaagataaccgagcccaagacaccgtatcaccct 320
             |||||||| ||||| || || ||||||||||| || || || |||||||| || ||||| 
Sbjct: 23917 attgaatcgaacaaacctgttaggcagaagattactgaaccaaagacaccataccacccg 23858

                              
Query: 321   atgatggatgaagatgg 337
             ||||||||||| |||||
Sbjct: 23857 atgatggatgatgatgg 23841
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>emb|AJ326958.1|HSA326958 Homo sapiens genomic sequence surrounding NotI site, clone
          NL1-ZO8C
          Length = 719

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 5  acctccggcgcgtgctcctccgc 27
          |||||||||||||||||||||||
Sbjct: 42 acctccggcgcgtgctcctccgc 20
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>gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, complete sequence
          Length = 40737

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 476   tgatgcagatgccatggaacag 497
             ||||||||||||||||||||||
Sbjct: 14294 tgatgcagatgccatggaacag 14315
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>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence
          Length = 170448

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 476   tgatgcagatgccatggaacag 497
             ||||||||||||||||||||||
Sbjct: 14296 tgatgcagatgccatggaacag 14275
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>emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chromosome 9, complete
             sequence
          Length = 176612

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 482   agatgccatggaacaggatgg 502
             |||||||||||||||||||||
Sbjct: 75524 agatgccatggaacaggatgg 75504
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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 434    taaaaatgattcaaaggatga 454
              |||||||||||||||||||||
Sbjct: 327440 taaaaatgattcaaaggatga 327460
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>emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chromosome 2, complete
              sequence
          Length = 197462

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 469    cagatgatgatgcagatgccatgga 493
              |||||||||||||||| ||||||||
Sbjct: 172385 cagatgatgatgcagaggccatgga 172409
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>gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosome 16, complete
             sequence
          Length = 130390

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tattcactgctttaaatggt 419
             ||||||||||||||||||||
Sbjct: 14892 tattcactgctttaaatggt 14911
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>gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, complete sequence
          Length = 169552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gaataggtggtgttatctgg 161
             ||||||||||||||||||||
Sbjct: 12524 gaataggtggtgttatctgg 12543
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>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    tcctcagatgatgatgcaga 484
              ||||||||||||||||||||
Sbjct: 186840 tcctcagatgatgatgcaga 186821
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>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence
          Length = 190432

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    tattcactgctttaaatggt 419
              ||||||||||||||||||||
Sbjct: 101101 tattcactgctttaaatggt 101082
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>gb|BC042340.1| Xenopus laevis LIM domain binding 3, mRNA (cDNA clone MGC:52706
            IMAGE:4683528), complete cds
          Length = 2503

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  atgaaattgaatcaaacaag 275
            ||||||||||||||||||||
Sbjct: 1466 atgaaattgaatcaaacaag 1485
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>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence
          Length = 218746

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   atgatgcagatgccatggaa 494
             ||||||||||||||||||||
Sbjct: 18687 atgatgcagatgccatggaa 18706
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>gb|BT023757.1| Drosophila melanogaster RE56180 full insert cDNA
          Length = 4661

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 408 ccgccagaaccgccgccgag 427
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>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4
          Length = 347050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   aaaaatgattcaaaggatga 454
             ||||||||||||||||||||
Sbjct: 93938 aaaaatgattcaaaggatga 93957
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>dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, complete sequence
          Length = 140513

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gaataggtggtgttatctgg 161
             ||||||||||||||||||||
Sbjct: 50603 gaataggtggtgttatctgg 50622
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      gaataggtggtgttatctgg 161
                ||||||||||||||||||||
Sbjct: 20161378 gaataggtggtgttatctgg 20161359
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>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182635

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ccgccagaaccgccgccgag 122
             ||||||||||||||||||||
Sbjct: 73470 ccgccagaaccgccgccgag 73489
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>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187230

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ccgccagaaccgccgccgag 122
             ||||||||||||||||||||
Sbjct: 46566 ccgccagaaccgccgccgag 46547
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>ref|NM_206671.1| Drosophila melanogaster AP-1 CG9113-RE, transcript variant E
           (AP-1gamma), mRNA
          Length = 3424

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 391 ccgccagaaccgccgccgag 410
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>ref|NM_176718.1| Drosophila melanogaster AP-1 CG9113-RD, transcript variant D
           (AP-1gamma), mRNA
          Length = 3441

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 408 ccgccagaaccgccgccgag 427
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>ref|NM_176717.1| Drosophila melanogaster AP-1 CG9113-RC, transcript variant C
           (AP-1gamma), mRNA
          Length = 3486

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 453 ccgccagaaccgccgccgag 472
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>ref|NM_167178.2| Drosophila melanogaster AP-1 CG9113-RB, transcript variant B
           (AP-1gamma), mRNA
          Length = 3423

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 408 ccgccagaaccgccgccgag 427
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>ref|NM_132299.3| Drosophila melanogaster AP-1 CG9113-RA, transcript variant A
           (AP-1gamma), mRNA
          Length = 3468

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 ccgccagaaccgccgccgag 122
           ||||||||||||||||||||
Sbjct: 453 ccgccagaaccgccgccgag 472
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>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence
          Length = 211156

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    gcctcttcaagtaaaaatga 442
              ||||||||||||||||||||
Sbjct: 150213 gcctcttcaagtaaaaatga 150194
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>gb|AC159187.2| Mus musculus BAC clone RP24-226L7 from chromosome 17, complete sequence
          Length = 188360

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   gatgatgcagatgccatgga 493
             ||||||||||||||||||||
Sbjct: 68865 gatgatgcagatgccatgga 68884
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>gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete sequence
          Length = 114637

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gaataggtggtgttatctgg 161
             ||||||||||||||||||||
Sbjct: 56317 gaataggtggtgttatctgg 56336
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 468     tcagatgatgatgcagatgc 487
               ||||||||||||||||||||
Sbjct: 1186567 tcagatgatgatgcagatgc 1186586
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>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete
              sequence
          Length = 200403

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaataggtggtgttatctgg 161
              ||||||||||||||||||||
Sbjct: 146922 gaataggtggtgttatctgg 146941
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>gb|AC008462.6|AC008462 Homo sapiens chromosome 5 clone CTC-352J10, complete sequence
          Length = 183591

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   gctgaagctatattcactgc 409
             ||||||||||||||||||||
Sbjct: 35948 gctgaagctatattcactgc 35929
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>gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, complete sequence
          Length = 220500

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   atgatgcagatgccatggaa 494
             ||||||||||||||||||||
Sbjct: 48645 atgatgcagatgccatggaa 48626
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
             sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ccgccagaaccgccgccgag 122
             ||||||||||||||||||||
Sbjct: 62411 ccgccagaaccgccgccgag 62430
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     accgccgccgagagcagcta 130
               ||||||||||||||||||||
Sbjct: 2628859 accgccgccgagagcagcta 2628840
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>gb|AC004074.1|AC004074 Homo Sapiens Chromosome X clone bWXD759, complete sequence
          Length = 153578

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  ttgctgcctaaacatttctt 188
            ||||||||||||||||||||
Sbjct: 3505 ttgctgcctaaacatttctt 3524
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>emb|CT009682.6| Mouse DNA sequence from clone RP23-136H15 on chromosome 16, complete
             sequence
          Length = 227456

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   tattcactgctttaaatggt 419
             ||||||||||||||||||||
Sbjct: 25085 tattcactgctttaaatggt 25066


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,962,255
Number of Sequences: 3902068
Number of extensions: 3962255
Number of successful extensions: 82634
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82476
Number of HSP's gapped (non-prelim): 157
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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