ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TS1R2_RAT (Q9Z0R7) Taste receptor type 1 member 2 precursor (G-p... 33 0.65
2KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3 32 1.4
3KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-ass... 30 5.5
4TS1R2_MOUSE (Q925I4) Taste receptor type 1 member 2 precursor (G... 30 5.5
5KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A 30 5.5
6KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (... 30 5.5
7PE1_ANOGA (O76217) Peritrophin-1 precursor (Peritrophin A) (Peri... 30 9.4

>TS1R2_RAT (Q9Z0R7) Taste receptor type 1 member 2 precursor (G-protein|
           coupled receptor 71) (Sweet taste receptor T1R2)
          Length = 843

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = +2

Query: 116 SPIQSGCCKPPTSCAFTY-NNETYWSANPGVPTVVTDPDC----LKWSNDQQTLCFQCDS 280
           +P QS     PTS   TY NN ++++ N  VP  +    C    +K S      CF+C  
Sbjct: 464 NPFQSIASYSPTSKRLTYINNVSWYTPNNTVPVSMCSKSCQPGQMKKSVGLHPCCFECLD 523

Query: 281 CKAG 292
           C  G
Sbjct: 524 CMPG 527



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>KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3|
          Length = 131

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = +2

Query: 17  RRPACRSMRRPVRD-PNTGMLVLEPAVVFYGRDLSPIQSGCCKP----PTSCAFTYNNET 181
           R  +C+++ RPV   P     + EP       D   +Q GCC+P    PTSC        
Sbjct: 31  RPVSCQTVSRPVTFVPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPC 90

Query: 182 YWSANPGVPTVVTDPDC 232
            W+     P  V  P C
Sbjct: 91  CWATTCCQPVSVQCPCC 107



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>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein|
           2.4) (High sulfur keratin-associated protein 2.4)
          Length = 128

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
 Frame = +2

Query: 20  RPACRSMRRPVRDPNTGMLVLEPAVVFYGRDLSPIQSGCCKP----PTSCAFTYNNETYW 187
           RP C   RRPV                   D   +Q GCC+P    P+SC         W
Sbjct: 52  RPICEPCRRPVCC-----------------DPCSLQEGCCRPITCCPSSCTAVVCRPCCW 94

Query: 188 SANPGVPTVVTDPDC 232
           +     P  V  P C
Sbjct: 95  ATTCCQPVSVQSPCC 109



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>TS1R2_MOUSE (Q925I4) Taste receptor type 1 member 2 precursor (G-protein|
           coupled receptor 71) (Sweet taste receptor T1R2)
          Length = 843

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = +2

Query: 101 YGRDLSPIQSGCCKPPTSCAFTY-NNETYWSANPGVPTVVTDPDC----LKWSNDQQTLC 265
           +G   +P QS     PT    TY +N ++++ N  VP  +    C    +K        C
Sbjct: 459 WGLSQNPFQSIASYSPTETRLTYISNVSWYTPNNTVPISMCSKSCQPGQMKKPIGLHPCC 518

Query: 266 FQCDSCKAG 292
           F+C  C  G
Sbjct: 519 FECVDCPPG 527



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>KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A|
          Length = 130

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
 Frame = +2

Query: 20  RPACRSMRRPVRDPNTGMLVLEPAVVFYGRDLSPIQSGCCKP----PTSCAFTYNNETYW 187
           RP C   RRPV                   D   +Q GCC+P    PTSC         W
Sbjct: 51  RPICEPCRRPVCC-----------------DPCSLQEGCCRPITCCPTSCQAVVCRPCCW 93

Query: 188 SANPGVPTVVTDPDC 232
           +     P  V  P C
Sbjct: 94  ATTCCQPVSVQCPCC 108



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>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)|
          Length = 132

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
 Frame = +2

Query: 20  RPACRSMRRPVRDPNTGMLVLEPAVVFYGRDLSPIQSGCCKP----PTSCAFTYNNETYW 187
           RP C   RRPV                   D   +Q GCC+P    PTSC         W
Sbjct: 51  RPICEPCRRPVCC-----------------DPCSLQEGCCRPITCCPTSCQAVVCRPCCW 93

Query: 188 SANPGVPTVVTDPDC 232
           +     P  V  P C
Sbjct: 94  ATTCCQPVSVQCPCC 108



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>PE1_ANOGA (O76217) Peritrophin-1 precursor (Peritrophin A) (Peritrophic|
           matrix protein 1) (AgAper-1)
          Length = 153

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
 Frame = +2

Query: 74  LVLEPAVVFYGRDLSPIQSGCCKPPTSCAFTYNNETYWSANPGVPTVVTDPDCLKWSNDQ 253
           LVL  A      D  P Q    +PP   A   + + +   N G P V   P  L W++ Q
Sbjct: 7   LVLLLAAAVLADDRCPPQDDPEQPPVLLAHPTDCDKFLICNHGTPVVSKCPPGLLWNDSQ 66

Query: 254 QTLCFQCD-----SCKAGV 295
           +    QCD      C  GV
Sbjct: 67  K----QCDYPAQAQCAPGV 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,928,914
Number of Sequences: 219361
Number of extensions: 1550196
Number of successful extensions: 4689
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4683
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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